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Volume 272, Number 36,
Issue of September 5, 1997
pp. 22866-22874
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.
Characterization of the Bovine Tenascin-X*
(Received for publication, February 26, 1997, and in revised form, June 19, 1997)
Florent
Elefteriou
,
Jean-Yves
Exposito
,
Robert
Garrone
and
Claire
Lethias
From the Institut de Biologie et Chimie des Protéines, CNRS,
Unité Propre de Recherche 412, Université Claude Bernard, 7 passage du Vercors, 69367 Lyon cedex 07, France
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
ABSTRACT
The primary structure of flexilin, an
extracellular matrix glycoprotein previously identified in bovine
tissues (Lethias, C., Descollonges, Y., Boutillon, M.-M., and Garrone,
R. (1996) Matrix Biol. 15, 11-19) was determined by
cDNA cloning. The deduced amino acid sequence (4135 residues)
reveals that this protein is composed of a succession of peptide motifs
characteristic of the tenascin family: an amino-terminal domain
containing cysteine residues and heptads of hydrophobic amino acids,
18.5 epidermal growth factor-like repeats, 30 fibronectin type III-like
(FNIII) domains, and a carboxyl-terminal fibrinogen-like motif.
Sequence analysis indicated that this protein is the bovine orthologue of human tenascin-X. By rotary shadowing, bovine tenascin-X was identified as monomers with a flexible aspect, which are ended by a
globule. More FNIII motifs were characterized in the bovine protein
than in human tenascin-X. The main difference between the human and
bovine tenascin-X is found in the arrangement of the three classes of
highly similar FNIII repeat types in the central region of tenascin-X.
The bovine FNIII motif b10 exhibits an RGD putative cell attachment
site. The functional role of this sequence is corroborated by cell
adhesion on purified tenascin-X, which is inhibited by RGD peptides.
Moreover, we demonstrate that this RGD site is conserved at the same
location in the human molecule.
INTRODUCTION
The tenascins are a family of extracellular matrix glycoproteins
with a typical multidomain structure. These proteins are widely
encountered in the animal kingdom (1, 2). In invertebrates, tenascin-like molecules were demonstrated in leech (3) and in Porifera,
the most primitive phylum of multicellular organism (4). In
Drosophila, two molecules related to tenascins, coded by the
genes tena and tenm, were
characterized (5, 6). Four members of the tenascin family have been
identified in vertebrates so far: tenascin-C (also called cytotactin),
tenascin-R (for restrictin), tenascin-X, and the recently characterized
tenascin-Y. Tenascins consist of an amino terminus, which is involved
in polymerization into oligomers, a series of epidermal growth factor
(EGF)1-like repeats, a
variable number of fibronectin type III (FNIII)-like repeats, and a
carboxyl-terminal globular fibrinogen-like domain (1, 2). In contrast
to other known tenascins, tenascin-Y harbors a domain containing
repeated serine-proline-Xaa motifs, which interrupts the series of
FNIII domains (7). The numbers of FNIII and EGF repeats differ among
the tenascins and among species. Different isoforms of tenascin-C,
tenascin-R, and tenascin-Y arise from various splicing events in the
region coding for FNIII repeats (7-9). An isoform lacking part of the
NH2-terminal cysteine-rich region was reported in chicken
tenascin-R (10).
Tenascin-X was initially reported as a partial sequence coded by gene
X, found on the opposite strand of the human 21-hydroxylase gene (P450c21B) and located in the human major
histocompatibility complex class III region (11-13). By extending
genomic sequences, Bristow et al. (14) obtained enough data
to predict the modular structure of the tenascin-X protein, which
comprises an amino-terminal cysteine-rich region with four heptad
repeats, 18.5 EGF-like repeats, at least 29 FNIII repeats, and a
fibrinogen-like domain. The carboxyl termini of mouse (15), rat (16),
and pig tenascin-X (17) have been characterized by cDNA cloning.
Northern blot analysis showed that the major species of tenascin-X
mRNA was about 13 kb (15, 17, 18). Other, smaller bands were
detected, suggesting the possibility of alternative splicing (15).
Tenascin-X is expressed much more widely than tenascin-C or tenascin-R
(2). Most tissues express detectable levels of tenascin-X mRNA, but
some fetal tissues (skeletal and heart muscles, dermis, testes, nerves,
and digestive tract) express high levels (14-17), which are maintained
in the adult tissues (except testes) and are also found in tendons,
ligaments, and peripheral nerves (17). Several cell lines of various
origins, including normal and transformed fibroblasts, carcinoma, and
glioma cells, also express tenascin-X (15, 18). Biochemical analysis
indicated that the molecular mass of the tenascin-X monomer is 450-500
kDa (15, 18). A smaller variant of 220 kDa has been described in
cultured fibroblasts (18).
Little is known about the function of tenascin-X, but indirect evidence
suggests that it is vital. Numerous mutations in the gene coding for
steroid 21-hydroxylase, which cause adrenal hyperplasia, are observed
in humans. The fact that none of these deletions extends to the region
coding for tenascin-X suggests that this protein has an essential
function (11). The pattern of tenascin-X expression in heart, skeletal
muscle, and limbs during development is consistent with this hypothesis
(16).
In a previous study, we characterized flexilin, a bovine extracellular
matrix glycoprotein (19). This high molecular mass molecule, which
appears to be a flexible monomer, is located on collagen fibrils. To
characterize flexilin further, specific antibodies were used to screen
a fetal calf skin expression library. We report here the complete
cDNA structure of flexilin. The deduced amino acid sequence
indicates that the overall domain organization of flexilin is similar
to that of tenascins and that it corresponds to the bovine orthologue
of human tenascin-X. Thirty FNIII repeats were found in the bovine
cDNA, some of which were unusually long (up to 134 amino acids),
compared with typical FNIII repeats identified previously (90-100
amino acids). These results, biochemical, cell attachment, rotary
shadowing data, and immunofluorescence localizations of flexilin are
discussed in relation to the available data on tenascin-X.
EXPERIMENTAL PROCEDURES
Antibodies
Mouse monoclonal antibodies were produced
according to previously described procedures (20). After immunization
with a complex antigenic mixture (containing flexilin and types XII and
XIV collagens) and immunofluorescence screening, nine monoclonal
antibodies specific for flexilin were selected. They were characterized
by comparing their properties with those of the 4E7 clone, which was
described previously (19), by tests that included enzyme-linked
immunosorbent assay (ELISA), Western blotting against purified
flexilin, and immunofluorescence assays in various organs. The 8F2
clone was chosen for this study. Polyclonal antisera were obtained by
immunizing mice with three injections (10 µg each) of immunopurified
flexilin.
cDNA Cloning
Skin from fetal calf (18 weeks old) was
dissected, frozen, and powdered in liquid nitrogen. Total RNA was
prepared with RNA-BTM (Bioprobe Systems), and poly(A)-rich RNAs were
selected by chromatography on oligo(dT)-cellulose. A cDNA library
was prepared from 5 µg of poly(A)-rich RNA, using random hexamer
primers and reagents from a cDNA synthesis kit and a MOSElox
cloning kit (Amersham Corp.), according to the manufacturer's
protocol. This expression cDNA library was screened initially with
monoclonal antibodies 8F2 and 4E7. About 200,000 recombinant MOSElox
clones were plated with Escherichia coli strain BL21 DE3 and
grown for 6 h at 37 °C. Nitrocellulose filters (Hybond C,
Amersham), which had previously been treated with 10 mM
isopropyl-1-thio- -D-galactopyranoside, were placed on
the plates and incubated at 37 °C for 4 h. The filters were
washed in 25 mM Tris-HCl, pH 8.0, 140 mM NaCl,
and 2.7 mM KCl (Tris-buffered saline) and submitted to the
immunodetection procedure using alkaline phosphatase conjugate, as
described previously for Western blotting (19).
Three antibody-positive cDNA clones (Flex-1, Flex-2, and Flex-3;
Fig. 1) were selected and screened again once or twice with the same
monoclonal antibodies. Purified clones were further tested with a
polyclonal antibody (see above). Insert cDNAs of the three clones
were therefore used to screen the same cDNA library under highly
stringent conditions, as described previously (21). From 150,000 plaque-forming units, 25 positive clones were purified; four of them
(Flex-11-Flex-13) are presented in Fig. 1.
Fig. 1.
Domain structure of flexilin, the bovine
orthologue of human tenascin-X. cDNA clones are depicted below
a schematic representation of bovine tenascin-X. The potential
N-linked glycosylation sites are indicated by vertical
bars ended by closed circles. Asterisk
indicates the location of oligonucleotides used during the screening
procedure. B, BamHI; P,
PstI. On the right side is a Northern blot
performed with fetal calf skin RNAs. The size of the tenascin-X
transcript is approximately 13 kilobases.
[View Larger Version of this Image (17K GIF file)]
To avoid the purification and characterization of numerous cDNAs,
an oligonucleotide strategy was preferred. For this purpose, 5 - and
3 -specific oligonucleotides (Fig. 1) were used to screen the skin
cDNA library, using 32P-end-labeled oligonucleotides by
standard procedures (22). Briefly, duplicate filters were probed at
50 °C for 2 h in hybridization buffer containing 0.05% sodium
pyrophosphate, 6 × SSC (1 × SSC is 15 mM sodium
citrate, 150 mM NaCl), 0.1% sodium dodecyl sulfate (SDS),
1 × Denhardt's solution (0.02% each of polyvinylpyrrolidone, Ficoll, and bovine serum albumin), and 100 µg/ml denatured salmon sperm DNA. The filters were washed twice in 3 × SSC and 0.05% sodium pyrophosphate at room temperature for 15 min and then with 6 × SSC and 0.05% sodium pyrophosphate at 50 °C for 15 min.
Three successive oligonucleotide screenings were performed, and five cDNA clones (Flex-21-Flex-23, Flex-31, and Flex-41; see Fig. 1) were obtained. None of the cDNA clones extended upstream of
Flex-21. With the previously isolated clones, 9253 base pairs of
sequence, including the 3 -untranslated region, were obtained.
The available data predicted that flexilin is the bovine orthologue of
human tenascin-X. To extend the sequence in the 5 direction, human
genomic data were used to generate two genomic polymerase chain
reaction (PCR) fragments. The human genomic regions that were amplified
corresponded to nucleotides 122-452 and 3353-3574 of the human
tenascin-X gene (numbering from Bristow et al., Ref. 14),
which code for the domain responsible for the oligomerization and the
furthest amino-terminal FNIII repeat of human tenascin-X, respectively.
The amplified fragments were cloned, sequenced, and used as a probe to
screen 400,000 plaque-forming units under moderately stringent
conditions, as described previously (21). Two positive clones, TX-1 and
TX-2, were isolated (Fig. 1).
The last two gaps between clones TX-1-TX-2 and TX-2-Flex-21 were
filled up by the reverse transcriptase (RT)-PCR strategy. First-strand
cDNA of poly(A)-rich RNA was synthesized using ExpandTM RT
(Boehringer Mannheim) and random hexamer primers, according to the
manufacturer's instructions. First-strand cDNAs were used for PCR
with Long ExpandTM Taq polymerase (Boehringer Mannheim). For
the first gap, between clones TX-1 and TX-2, two primers were used to
generate the PCR-1 clone (Fig. 1): PCR-1, forward
(5 -GGACTGCGGTACGCGTGCCTGCCCTGGCGA-3 ), corresponding to nucleotides
1652-1681; and PCR-1, reverse (5 -GCAGTCCTCACCCTCGTAGCCGTCGTC-3 ), corresponding to nucleotides 1910-1937.
For the second gap, between clones TX-2 and Flex-21, two primer pairs
with a common 5 -oligonucleotide were used to generate clones PCR-2 and
PCR-3 (Fig. 1). The primers are: PCR-2 and -3, forward
(5 -CCAGCCTGACACCTTTACCCACTTCCAGC-3 ), corresponding to nucleotides
3131-3159; PCR-2, reverse (5 -TTGCGGCCGACGTCCAGGTTGGAGATGAGG-3 ), corresponding to nucleotides 3524-3553; and PCR-3, reverse
(5 -AGAGCCCTGGGCCACCGTCC-3 ), corresponding to nucleotides
4021-4040.
PCR was performed in the reaction mixture described in the Boehringer
Mannheim protocol. Initial denaturation at 94 °C for 2 min was
followed by 30 PCR cycles at 94 °C for 10 s, 61 °C for 30 s, 68 °C for 45 s and an additional elongation time of
20 s/cycle for the last 20 cycles. After a final extension at 68 °C
for 7 min, the PCR products were purified from agarose gels, cloned into pBluescript II SK(+) (Stratagene), and sequenced.
To obtain information about human sequences coding for the FNIII motifs
VII to IX (numbering from Bristow et al., Ref. 14), RT-PCR
experiment was carried out as above using poly(A)-rich RNAs purified
from MG63 cells. The RT-PCR product coded for amino acids 1284-1350 of
the human tenascin-X (14). Using the poly(A)-rich RNAs, a MG63 cDNA
library was prepared in the MOSElox cloning kit (see above) and
screened with the RT-PCR product. This allowed the purification of one
cDNA clone (HFX1). For genomic analyses, PCR experiment was
performed using human genomic DNA (Promega). The amplified human
genomic region corresponds to nucleotides 6486-6797 of the human
tenascin-X gene (numbering from Bristow et al., Ref.
14).
DNA Sequencing and Computer Analysis
Sequencing was
performed with the T7 sequencing kit (Pharmacia Biotech Inc.) using the
dideoxynucleotide chain termination procedure on double-stranded DNA.
Both DNA strands were sequenced using universal primers and synthetic
oligonucleotides (Isoprim, Toulouse, France) corresponding to the
appropriate cDNA sequences. For G- and C-rich regions, the
sequencing reactions were carried out with dITP, an analogue of dGTP.
The DNA sequences were analyzed by the DNAid computer program (23).
Multiple alignments and identity studies were performed via the IBCP
site server2 with the
Antheprot (24) and Multalin (25) programs.
Northern Blot Analysis
Northern blotting was performed as
described elsewhere (22). Briefly, 10 µg of total RNA were
electrophoresed on a 0.8% agarose, 0.66 M formaldehyde
gel. The gel was soaked in 50 mM NaOH and 10 mM
NaCl for 20 min and neutralized twice in 0.1 M Tris-HCl, pH
7.4, for 20 min. The RNAs were transferred overnight onto nylon
membranes (Hybond N+, Amersham). The filters were hybridized with a
32P-labeled cDNA probe (5 PstI fragment of
clone Flex-12) overnight at 65 °C in 6 × SSC, 5 × Denhardt's solution, 0.1% SDS, and 100 µg/ml denatured salmon sperm
DNA. The final washing was done in 0.1 × SSC and 0.1% SDS at
65 °C. The 0.28-6.58-kb RNA ladder from Promega was used as a size
marker.
Biochemical Methods, Rotary Shadowing, and
Immunolocalization
Flexilin was extracted from bovine fetal skin
with 0.5 M NaCl in the presence of proteases inhibitors and
immunopurified on a column prepared with the 8F2 antibody. The
purification procedures, SDS-polyacrylamide gel electrophoresis (PAGE),
immunoblotting, rotary shadowing, and immunofluorescence were performed
as described previously (19).
Cell Adhesion Assays
The osteosarcoma cell line MG63 was
obtained from American Type Culture Collection (Rockville, MD) and was
maintained in Dulbecco's modified Eagle's medium (DMEM) containing
10% fetal bovine serum and 50 µg/ml gentamicin. Adhesion substrates
were prepared by adding 50 µl of immunopurified bovine tenascin-X (at
5 µg/ml) to 96-well ELISA plates (Nunc) overnight at 4 °C. The
plates were blocked with 1% bovine serum albumin for 2 h. Cell
suspension was obtained by a brief treatment of the cell layer with
0.25% trypsin and 0.05% EDTA, centrifugation with medium containing 1 mg/ml soybean trypsin inhibitor (Sigma), and resuspension in DMEM
without serum. To perform the adhesion, 100 µl of cell suspension was
added to each well and left for 50 min at 37 °C. For inhibition studies, cells were suspended with DMEM containing synthetic peptides, GRGDS as inhibitor, or SDGRG as control (Sigma). Incubation with peptides was performed for 10 min at room temperature before adding cell suspension to the wells. Non-adherent cells were removed and
adherent cells submitted to fixative treatment using the buoyancy method (26). Wells were rinsed with phosphate-buffered saline, and
adherent cells were quantitated by coloration with 0.1% crystal violet, lysis with 0.2% Triton, and reading absorbance at 570 nm on a
MR5000 spectrophotometer (Dynatech). Three wells were averaged for each
point tested, and the standard deviation of the three points was above
10% of the mean. For morphological studies of adherent cells, eight
chamber culture slides (Falcon) were coated with tenascin-X or
fibronectin as described above. After blocking, cells were added, left
for 50 min at 37 °C, and gently washed with phosphate-buffered
saline. After fixation with 2% glutaraldehyde, cells were examined by
phase contrast microscopy and photographed. Inhibition studies were
performed as described above.
RESULTS
Cloning of Flexilin cDNA
Poly(A)+ RNAs
extracted from early embryonic calf skin, a flexilin-rich tissue (19),
were used to construct an expression cDNA library. Screening of
this library with monoclonal antibodies specific for flexilin resulted
in the detection of three cDNA clones (Flex-1, Flex-2, and Flex-3;
Fig. 1), which were also immunoreactive with polyclonal anti-flexilin serum. The 5 ends of these clones were
sequenced according to the expression vector. The sequence NLYGFHDR,
previously obtained by amino acid sequencing of flexilin tryptic
peptides (19), was identified in two of these cDNA clones (Flex-1
and Flex-2; Fig. 2). Moreover, complete
characterization of the three immunoreactive clones shows that none of
them overlap. Analysis of their sequences reveals that they potentially
code for FNIII repeats, the highest score being shared with the central FNIII repeats of human tenascin-X (14). Owing to large gaps between the
bovine and human sequences, the percentage of identity could not be
determined precisely.
Fig. 2.
Primary structure of bovine tenascin-X.
The sequence is arranged in groups of related regions, as suggested by
Spring et al. (27). The amino acids are numbered
on the right. EGF- and FNIII-like repeats are numbered from
1 to 18 and b0 to b29, respectively. The FNIII repeats were aligned by
the Multalin program (25). All cysteine residues, the completely
conserved tryptophan and tyrosine residues of the FNIII repeats, and
the RGD sequence are indicated in bold. Potential
N-linked glycosylation sites and sequences identified by
protein sequencing (19) are underlined. Nine amino acid
motifs (nonades) located at the amino termini of the FNIII repeats are
identified by horizontal brackets. Gaps are indicated by
dashes.
[View Larger Version of this Image (66K GIF file)]
Multiple screenings of the cDNA library with specific cDNA and
oligonucleotide probes (see "Experimental Procedures"), allowed us
to purify eight new clones (Flex-11-Flex-13, Flex-21-Flex-23, Flex-31, and Flex-41; Fig. 1). These overlapping cDNA clones cover 9253 bp, with an open reading frame of 3045 codons ended by a stop
codon TAG, and 113 bp of 3 -untranslated region. The open reading frame
could be divided into two parts (Fig. 1), comprising a succession of 27 FNIII repeats and a fibrinogen-like carboxyl-terminal motif. The last
FNIII repeats (numbered 26-29, Fig. 1) and the fibrinogen-like motif
share more than 80% of identity with comparable domains of human,
mouse, and pig tenascin-X (14, 15, 17). Moreover, the 3 end of
flexilin cDNA is 100% identical to the 3 end of the bovine
cytochrome P450c21 gene (data not shown; Ref. 28). The same
overlap was identified in human, rodents, and pig genes (11, 15-17).
Taken together, these findings indicate that bovine flexilin and human
tenascin-X are orthologous proteins.
Since even extensive screening was insufficient to obtain the full
cDNA sequence, PCR products coding for either the amino terminus or
the furthest amino-terminal FNIII repeats of human tenascin-X were
generated and used to screen our cDNA library again. With this
procedure, we obtained two clones, TX1 and TX2 (Fig. 1). The two last
gaps, of 69 and 135 bp, were filled by sequence analysis of RT-PCR
products. The complete cDNA sequence is 12,706 bp long and contains
an open reading frame of 4135 codons. The deduced amino acid sequence
is presented in Fig. 2. The 5 -untranslated region (185 bp long) is
comparable to the counterpart sequence of the major mRNA of human
tenascin-X (29). Northern blot analysis of total RNAs from fetal skin
showed that bovine tenascin-X transcript is about 13 kb (Fig. 1).
Complete Primary Structure of Bovine Tenascin-X
Bovine
tenascin-X harbors a typical tenascin structure, which is presented in
Figs. 1 and 2. The first 22 amino acids may correspond to a typical
signal peptide (30). Thus, the predicted molecular size of mature
bovine tenascin-X monomer was calculated to be 445 kDa. The signal
peptide is followed by a cysteine-rich region (amino acids 23-152).
Except for the furthest amino-terminal sequence, this domain is
comparable to the region responsible for the trimerization of
tenascin-C and tenascin-R monomers and is composed of four heptad
repeats flanked by seven cysteine residues. Next is found the
carboxyl-terminal half of an EGF-like domain, separated from 18 complete EGF-like domains by a proline- and serine-rich spacer of 15 amino acids (amino acids 153-744). The cysteine residues in these
EGF-like repeats are organized in the same way as in other tenascins,
i.e.
X4CX3CX5CX4CX1CX8C
(26). As in human tenascin-X, the series of 18 EGF-like modules is
interrupted by a four-amino acid insertion between repeats 16 and 17. The sequence following the EGF-like motifs is composed of 30 FNIII repeats (amino acids 745-3910). The size of each FNIII domain varies
from 88 to 134 residues. Finally, a fibrinogen-like domain is found at
the carboxyl terminus (amino acids 3911-4135). The predicted amino
acid sequence also reveals five N-linked oligosaccharide acceptor sites in the amino and carboxyl termini of the molecule (Figs.
1 and 2). A single RGD sequence, suggesting a cell adhesive site, is
found in the b10 FNIII motif (Figs. 1 and 2).
Comparison of Human and Bovine Tenascin-X
For this analysis,
the human and bovine tenascin-X sequences were separated into three
parts. Two of them, the amino-terminal region (comprising the probable
oligomerization region and the EGF-like domains) and the
fibrinogen-like domain, could be aligned perfectly in the two species,
with an identity greater than 80%. The third region, which includes
the FNIII repeats, is more difficult to analyze since the human
tenascin-X genomic sequence has not been fully characterized,
especially in the 5 region.
The 30 bovine (b0-b29) and the 28 human (h1-h29) FNIII repeats were
also compared; the main results are presented in Fig. 3. The furthest amino-terminal bovine
FNIII repeat (b0, Fig. 3A) has not yet been characterized in
human tenascin-X, but the third bovine FNIII repeat (b2) may represent
the human FNIII-2 repeat (h2), which has been identified only by
Southern blotting (13). The b0 and b2 repeats showed strongest identity
with b1 and b28 (31%) and with b26 (28.4%), respectively. As shown in
Fig. 3 (A and B), three regions of bovine and
human tenascin-X appear to be colinear. The first contains FNIII
repeats 1-5 in both species (Fig. 3A). The second
corresponds to FNIII motifs b9-b13 and h7-h11 (Fig. 3A).
The third encompasses FNIII repeats 22-29 in both species (Fig.
3B).
Fig. 3.
Sequence analyses of individual
amino-terminal (A), carboxyl-terminal (B), and
central (C) FNIII repeats of human and bovine tenascin-X. The percentages of identity were calculated with the
Antheprot software (24). Owing to the variable size of the amino
terminus of FNIII repeats, the sequences used for this analysis were
limited to the shortest b29 or h29 repeats defined from alignments with
the Multalin program (25). In the amino-terminal region, the partial
colinearity between human and bovine sequences is shown by
shading the corresponding scores. Perfect colinearity between the two sequences in the carboxyl-terminal part is shown by
shading the greatest values. Three types of FNIII repeats
(X1, X2, and X1-2 types) were characterized after analysis of the
sequences of the central region. Values characterizing the X1 and X2
type repeats are represented by bold and open
boxes, respectively. The X1-2 type is shown by a
triangle. Asterisk indicates the human FNIII
repeats that have not been completely characterized.
[View Larger Version of this Image (43K GIF file)]
The remaining FNIII repeats are essentially located in the central part
of both bovine and human tenascin-X. Three classes of repeats could be
identified (Fig. 3C). The first, X1, comprises highly
homologous FNIII repeats (greater than 80% identity), and the
prototypes of this class are FNIII motifs b7 and h6. The major characteristic of these FNIII motifs is the presence of a variable number of nonade (nine amino acids in length) motifs at the amino terminus. These nonade motifs, which have the consensus sequence T(E/A)XEETPSP, are generally followed by the PEEPPEP
sequence (Fig. 2). Two of the human X1 FNIII domains (h6 and h15) lack the nonade motif. In one of them, h15, the choice of an upstream AG
splicing acceptor site from the published data (14) leads to the
addition of 12 amino acids at the amino terminus, including a nonade
motif. The second class of FNIII repeats, X2, also represents strongly
identical repeats with prototype domains, b13 and h11. The third class
of FNIII repeats, observed only in bovine, is called type X1-2, as the
repeats are related to both of the other FNIII types (70-80%
identity). The bovine FNIII repeats b6 and b14, which are included in
the X1-2 class, harbor nonade motifs at their amino termini, like type
X1. As shown in Fig. 4, the three FNIII
classes are arranged differently in bovine and human tenascin-X; it is
therefore difficult to assume any colinearity for this region in the
two species.
Fig. 4.
Schematic representation of alignment of
FNIII regions of bovine and human tenascin-X. The 30 bovine
(b0-b29) and 28 human (h1-h29) FNIII repeats are aligned according to
the sequence analyses shown in Fig. 3. FNIII modules that are common to
the two species are indicated by a vertical bar, with the
percentage identity. X1, X2, and X1-2 indicate members of the three
FNIII classes defined in the legend of Fig. 3. The shaded
area represents the uncorrelated central FNIII repeats.
Dashed circles represent FNIII repeats that are not
characterized or absent from human tenascin-X. Asterisk
indicates human FNIII repeats that have not been completely
characterized. Black triangles represent the related locations of uncharacterized sequences of the human tenascin-X gene.
[View Larger Version of this Image (22K GIF file)]
Biochemical Properties, Rotary Shadowing, and Tissue Expression of
Bovine Tenascin-X
SDS-PAGE analysis under reducing conditions and
Coomassie Blue staining show freshly isolated, immunopurified
tenascin-X as three high molecular mass bands (Fig.
5A, lane 1). The
faster migrating bands (380-400 kDa) correspond to those described
previously (19). The molecular mass of the more slowly migrating band
(420 kDa) was estimated by comparison with the migration of unreduced bovine plasma fibronectin. This value is in correct agreement with the
mass calculated from the deduced amino acid sequence. The latter band
disappears rapidly during storage, whatever the conditions.
Fig. 5.
Characterization of immunopurified bovine
flexilin. A, Coomassie Blue staining after electrophoresis
on 5% acrylamide gels under reducing (lane 1) or
non-reducing (lane 2) conditions. After Western blotting of
reduced samples, all three bands were detected with the 8F2 monoclonal
antibody (lane 3). DTT, dithiothreitol. B, electron micrographs of flexilin purified from bovine
skin. Rotary shadowing shows the molecules as flexible structures with a terminal globule (bar = 50 nm).
[View Larger Version of this Image (71K GIF file)]
To verify that some of these bands do not correspond to proteins that
interact with tenascin-X, we performed immunoblotting using the 8F2
antibody on purified protein. All three bands were clearly revealed
(Fig. 5A, lane 3), demonstrating that monomers of
different sizes were present in our purified preparation. Only two
bands were observed after SDS-PAGE under nonreducing conditions, the
band with intermediate migration being stronger than under reducing
conditions (Fig. 5A, lane 2). Moreover, very
faint bands are found on the top of the gel under nonreducing
conditions. When examined by rotary shadowing, the immunopurified
preparations were found to be highly homogeneous, consisting of
flexible units of 150-180 nm ending with a globule (Fig.
5B).
The expression of tenascin-X has been tested in various bovine organs.
It has been shown to be present in skin, tendon, and kidney glomeruli
and under endothelia (19). In this study, we extended our observations
to muscle and intestine. Connective tissue associated with skeletal
muscle (epimysium and perimysium) was intensely labeled with
anti-flexilin antibodies (Fig.
6A), and similar results were
obtained within the striated muscle of the hypodermis (Fig.
6B). In cardiac tissue, typical extracellular matrix
staining is observed along muscle cells (Fig. 6C). In gut sections, thin fibers of the lamina propria are stained (Fig. 6D).
Fig. 6.
Immunofluorescence localizations of flexilin
in fetal bovine tissues. Figure shows detection with the 8F2
monoclonal antibody. In skeletal (A) and hypodermal
(B) muscles, labeling is found within the filamentous
network of perimysium and epimysium. In cardiac muscle (C),
the thin connective tissue layer embedding muscular cells is
specifically stained. In intestine (D), muscularis mucosae
fibers are intensely labeled.
[View Larger Version of this Image (101K GIF file)]
Functional Role of the RGD Site
In a previous study (14), no
RGD site was characterized in human tenascin-X. From Fig. 4, the domain
comparable to bovine FNIII b10, which harbors the RGD sequence, is the
human h8 motif. To detect the presence of an RGD site in the
uncharacterized amino-terminal part of the h8 motif, we performed
RT-PCR experiments covering part of the sequence coding for the h7 and
h8 domains (Fig. 7). As shown in Fig.
7B, the amino-terminal side of the FNIII motif h8 contains
an RGD sequence. This result was confirmed by analysis of a human
cDNA clone, although some discrepancies with the published human
sequence were noted (Fig. 7). Several sequence conflicts are clustered
just after a gap of 500 bp, including the 5 part of the exon coding
for h8 repeat. With our data, an improved identity score was obtained
between the FNIII motifs b10 and h8 (87.5% instead of 72.9%).
Moreover, we found that the sequence of the amino-terminal part of the
human FNIII motif h9 also differs from the published data. At the
nucleotide level, the divergence is located upstream of a
PstI site. Analysis of a genomic PCR product reveals that a
327-bp PstI fragment was previously omitted (Fig. 7B and Ref. 14). From this PstI fragment, it
appears that the human FNIII motifs h8 and h9 are coded by two exons
but not by an exon fusion as described previously (14). After these
corrections, the identity between the h9 and b11 repeat sequences
increases from 80.2 to 84.6%.
Fig. 7.
RGD site in the human tenascin-X
sequence. Part of the FNIII motif h7 is presented in A.
The complete FNIII motifs h8 and h9 are presented in B. Our
human nucleotide sequence (HumTX) was aligned with the
corresponding sequence (14) published previously. Encoded amino acids
are indicated below the second base of the corresponding human
nucleotide sequence codons. Identical amino acid between human h7 or h8
and h9 FNIII motifs and, respectively, bovine b9 or b10 and b11 FNIII
modules are bold. Different amino acids are
circled. The deduced amino acids from the published human
tenascin-X sequence (14) are indicated at top only when they
are in conflict with our data. Numbering of the nucleotide sequence
labeled Ref. 14 is as in Bristow et al. (14). The PstI site flanking the omitted fragment of the human
tenascin-X gene and the RGD site are underlined.
Lowercase letters indicate intronic sequences.
[View Larger Version of this Image (41K GIF file)]
The function of the RGD site in bovine tenascin-X was tested by cell
adhesion studies using the osteosarcoma cell line MG63. These cells
were shown to adhere on tenascin-X-coated wells (Fig. 8). Moreover, they exhibited a round
morphology and did not spread on tenascin-X (Fig. 8B), in
contrast to the results obtained on immobilized fibronectin (Fig.
8A). Inhibition studies conducted with a synthetic peptide
containing the RGD sequence clearly demonstrate that this adhesion is
RGD-dependent (Fig. 8C), and that inhibition increases with peptide concentration (Fig. 8D).
Fig. 8.
Adhesion of MG63 cells to bovine
tenascin-X. Morphology of cells plated on substrates coated with
fibronectin (A) and tenascin-X (B and
C) is shown. Cells were previously incubated with control
peptide (B) and RGD peptide (C). In D,
cell adhesion on bovine tenascin-X was quantified using a colorimetric
method, and a significant inhibition was observed in the presence of
RGD peptide.
[View Larger Version of this Image (118K GIF file)]
DISCUSSION
In this study, we have characterized the primary structure of
bovine flexilin. Sequence analysis indicates that this large extracellular matrix glycoprotein is the bovine orthologue of human
tenascin-X. Moreover, the immunofluorescence localizations are in good
agreement with those observed in other species (15, 16). Our results
therefore represent the first complete sequencing of the nucleotides
and deduced amino acid for the full length of the cDNA of a
vertebrate tenascin-X.
Electron micrographs of purified bovine tenascin-X (Fig. 5B
and Ref. 19) show the presence of monomeric molecules appearing as
150-180-nm flexible structures with a knob at one end, which is
probably the fibrinogen-like module. The tenascin-X molecule looks like
the tenascin-C, -R, and -Y monomers, except for its size and its
flexible aspect. The length of the molecule is due to the large number
of FNIII repeats (30, whereas tenascin-C has only 8-16); its flexible
aspect may reflect the unusual size (up to 134 amino acids) of some
FNIII repeats in bovine tenascin-X, in comparison with 90-100 amino
acids in these repeats in other proteins (31). The additional amino
acids are located at the amino terminus and are mostly multiple nonade
motifs with the canonical sequence T(E/A)XEETPSP. It is
unknown whether these conserved regions are an integral part of the
FNIII repeats or act as a link between them. The amino-terminal
extensions observed in bovine tenascin-X FNIII repeats, which are rich
in glutamic acid and proline, are also present in chicken tenascin-Y
but in a shorter form. Other similarities between tenascin-Y and
tenascin-X were described by Hagios et al. (7), who
indicated that the FNIII domains YB, YC, YD, and YE of tenascin-Y are
similar to the 23 central FNIII repeats of human tenascin-X. Our
comparisons between bovine tenascin-X and chicken tenascin-Y led us to
the same conclusion.
As suggested by Bristow et al. (14), the four heptad repeats
located at the amino terminus of human tenascin-X could provide the
structural basis for the assembly of three monomers, which might form a
triple-stranded, coiled helix analogous to TN-C and TN-R trimers. These
heptads are flanked by seven cysteine residues that may stabilize the
trimer by forming disulfide bonds. Human and bovine tenascin-X lack the
amino-terminal cysteine found in tenascin-C and -R, which is involved
in the polymerization process in tenascin-C, by which two trimers form
an hexamer. The production of monomeric tenascin-X molecules from fetal
bovine skin may be due to proteolysis in a sensitive site at the amino
terminus. In some reports, tenascin-C and -R were also shown to be
extracted from tissues as monomers (10, 32). This hypothesis is likely since the 420-kDa band tends to disappear during storage. We postulate that other bands observed in SDS-PAGE (Fig. 5A) arise from
either another protease-sensitive site or from alternatively spliced isoforms.
Bovine tenascin-X contains five putative sites of
N-glycosylation (NXS/T), which are observed in
same locations as in the human tenascin-X molecule. Another interesting
sequence, a putative RGD cell attachment site, is located in the FNIII
repeat b10 (Fig. 2). By RT-PCR and cDNA analysis, we have shown
that the corresponding human FNIII domain (h8) contains this RGD site.
It is noteworthy that the tenascin-X RGD site is located at the amino
terminus of the FNIII b10 and h8 modules (Figs. 2 and 7A),
whereas in human and chicken tenascin-C and in fibronectin the RGD site
is located at the carboxyl terminus of FNIII repeats (25, 33, 34). It
is tempting to speculate that its location (between two folded FNIII
repeats) might promote its interactions. Cell adhesion experiments using purified bovine tenascin-X and inhibition with RGD peptides are
consistent with this hypothesis. Other adhesive sites may also be
present in the tenascin-X molecule, such as the fibrinogen-like motif,
which was demonstrated to be active in tenascin-C; adhesion to this
domain was inhibited by RGD peptides, even though it has no RGD
sequence (35). It is likely that both RGD site and fibrinogen-like domain are involved in cell adhesion to tenascin-X.
An overall comparison of bovine and human tenascin-X sequences shows
good correlation between the two termini of these proteins. Greater
than 80% identity is observed for the cysteine-rich potential polymerization region including the four heptad repeats, the 18.5 EGF-like domains, and the fibrinogen-like domain. Within the FNIII region, this score is reached for the first five FNIII repeats, bovine
b7 and human h6 FNIII domains, bovine b9-b12 and human h7-h10 FNIII
modules, and the eight carboxyl-terminal FNIII repeats (Figs. 3 and 4).
Large uncharacterized sequences between the exons coding for the human
FNIII repeats h5 and h6 and for h6 and h7, of 1.8 and 6.5 kb (14),
respectively, may contain genetic information coding for repeats
corresponding to bovine FNIII b6 and b8. Following the same argument,
bovine repeats b0 and b2 may have their counterparts in human
tenascin-X.
The central parts of human and bovine tenascin-X seem to be organized
differently (Figs. 3 and 4). They are made of three highly homologous
types of FNIII repeats, which we have named X1, X2, and X1-2. The last
group, characterized only in bovine, is related similarly to types X1
and X2 and may represent a common ancestor. The absence of colinearity
in the central part of bovine (deduced from cDNA data) and human
(deduced from genomic analysis) tenascin-X arises from a distinct
number and a different organization of the three types of FNIII
repeats. The first hypothesis to explain this organization is that the
genomic region coding for the central part of the tenascin-X has
evolved differently in the two species. Similarly, the available data
indicate that human tenascin-C harbors two more FNIII repeats than
mouse and chicken proteins. In the second hypothesis, bovine and human
tenascin-X genes have the same genetic information, and the discrepancy
observed between the two species arises from alternative splicing
events. Several lines of evidence are consistent with the latter
hypothesis. In the region coding for the human FNIII repeats h11-h21,
there are five gaps of 0.5, 1, 3.2, 1, and 0.8 kb (Fig. 4). Although
the 11 human FNIII repeats may reflect the entire genetic information of this region, the possibility that one or more additional FNIII repeats are contained within these gaps cannot be excluded. In bovine
tenascin-X, only nine FNIII repeats (b13-b21) are present in this
region, and one of them, FNIII b14 (type X1-2), has not been
identified in the human sequence. It might be suggested that the exons
coding for the central FNIII repeats of tenascin-X are involved in
alternative splicing events. It is noteworthy that these repeats have
the strongest identity with the FNIII repeats of tenascin-Y, -C, and
-R, which undergo alternative splicing. This possibility does not
contradict the results of Speek et al. (29), who showed that
human tenascin-X transcripts always contain the sequence coding for the
last FNIII repeats (h23-h29). An alternate explanation for the
differences between bovine and human tenascin-X could be a combination
of the two hypotheses.
The present study has elucidated the primary structure of bovine
tenascin-X by cDNA cloning and has correlated these results with
biochemical data. Morphology of cells in contact with tenascin-X suggests a function similar to that of tenascin-C, i.e. the
modulation of cell-matrix interactions, and the RGD sequence found in
tenascin-X seems of particular importance for its biological
properties.
FOOTNOTES
*
This work was supported by CEE Contract "Biotechnology
BIO4-CT96-0662."The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) Y11915 (bovine sequence) and Y13782 and Y13783 (human sequences).
To whom correspondence should be addressed: IBCP, UPR-CNRS 412, 7 passage du Vercors, 69367 Lyon cedex 07, France. Tel.: 33-472-72-26-57; Fax: 33-472-72-26-02; E-mail: biocell{at}ibcp.fr.
1
The abbreviations used are: EGF, epidermal
growth factor; bp, base pair(s); DMEM, Dulbecco's modified Eagle's
medium; ELISA, enzyme-linked immunosorbent assay; FNIII, fibronectin
type III; kb, kilobase pair(s); PCR, polymerase chain reaction; RT,
reverse transcriptase; PAGE, polyacrylamide gel electrophoresis.
2
The IBCP site server is accessible via the World
Wide Web (http://www.ibcp.fr).
ACKNOWLEDGEMENTS
We acknowledge the expert assistance of
Christophe Geourjon in sequence analyses, Yvette Descollonges for the
production of monoclonal antibodies, and Alain Bosch for photographic
artwork.
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