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(Received for publication, June 5, 1997, and in revised form, July 9, 1997)
From the We previously isolated a mutant cell that is the
only mammalian cell reported to have a persistently low level of
UDP-glucose. In this work we obtained a spontaneous revertant whose
UDP-glucose level lies between those found in the wild type and the
mutant cell. The activity of UDP-glucose pyrophosphorylase (UDPG:PP), the enzyme that catalyzes the formation of UDP-glucose, was in the
mutant 4% and in the revertant 56% of the activity found in the wild
type cell. Sequence analysis of UDPG: PP cDNAs from the mutant
cell showed one missense mutation, which changes amino acid residue 115 from glycine to aspartic acid. The substituted glycine is located
within the largest stretch of strictly conserved residues among
eukaryotic UDPG:PPs. The analysis of the cDNAs from the revertant
cell indicated the presence of an equimolar mixture of the wild
type and the mutated mRNAs, suggesting that the mutation has
reverted in only one of the alleles. In summary, we demonstrate that
the G115D substitution in the Chinese hamster UDPG:PP
dramatically impairs its enzymatic activity, thereby causing cellular
UDP-glucose deficiency.
UDP-glucose (UDP-Glc)1
is an essential metabolite in several cellular processes: the synthesis
of glycogen (1, 2), the synthesis of the carbohydrate moiety of
glycolipids (3), glycoproteins (4, 5), and proteoglycans (6), the entry
of galactose into glycolysis (7), and the synthesis of UDP-glucuronic
acid (UDP-GlcUA) (8, 9) (see Fig. 1). Furthermore, it plays a crucial
role for the "quality control" of newly synthesized glycoproteins taking place in the endoplasmic reticulum (10). Here it is used by the
UDP-Glc:glycoprotein glucosyltransferase, which recognizes and
glucosylates misfolded glycoproteins (11-13). The added glucose is
then removed by glucosidase II (14), and a
deglucosylation-reglucosylation cycle occurs until the protein is
correctly folded to allow its exit from the endoplasmic reticulum (10,
15).
A UDP-Glc deficiency occurs in insulin-dependent tissues of
diabetic organisms (16-18), probably as a consequence of the impaired glucose transport into the cells. A low level of UDP-Glc also occurs in
cultured cells incubated under hypoxic conditions (8, 9) or in
glucose-deficient medium (19-22).
We previously isolated a mutant cell line, Don Q (23), which is the
only mammalian cell reported to have a persistently low level of
UDP-Glc (24). Don Q was obtained after mutagenesis with ethyl
methanesulfonate of wild type Chinese hamster lung fibroblasts
(referred to here as Don wt) and selection for resistance to
Clostridium difficile toxin B (TcdB) (23). This cytotoxin produces collapse of the actin cytoskeleton via a glucosylation of the
small GTPases Rho, Rac, and CDC42, which are members of the Ras
superfamily (25). Don Q is as sensitive as the wild type to other
endocytosed toxins like diphtheria, pertussis, and ricin (23) but is
also resistant to the Clostridium sordellii lethal toxin
(24). The latter cytotoxin is a glucosyltransferase that has as targets
the small GTP-binding proteins Ras, Rap, and Rac (26, 27). The
resistance of Don Q to the glucosyltransferase toxins from C. difficile and C. sordellii (23, 24) is explained by the
finding that these toxins use UDP-Glc as a cofactor (28).
The synthesis of UDP-Glc (and other UDP-hexoses) depends on the amount
of glucose-6-phosphate (Glc-6-P) and UTP available in the cell (see
Fig. 1). Two enzymes are needed for UDP-Glc synthesis: phosphoglucomutase (EC 5.4.2.2), which interconverts Glc-6-P and
glucose-1-phosphate (Glc-1-P), and UDP-glucose pyrophosphorylase (UDPG:PP; EC 2.7.7.9), which catalyzes the formation of UDP-Glc from
UTP and Glc-1-P (see Fig. 1). Because the reaction catalyzed by UDPG:PP
is near equilibrium (29-31), a persistently defective UDP-Glc
production could be due to a lowered transport of glucose across the
plasma membrane, a UTP deficiency, or a defect in either phosphoglucomutase or UDPG:PP. The aim of this work was to clarify the
reason for the UDP-Glc deficiency in Don Q.
A mutant cell
denoted as CdtRQ (23) (referred to here as Don Q) of the
diploid Chinese hamster lung Don fibroblasts (ATCC CCL-16) was seeded
into 96-well plates (Nunc, Roskilde, Denmark). Cells were cultivated at
37 °C in Eagle's medium (Flow Laboratories, Irvine, Scotland)
supplemented with 10% fetal bovine serum, 5 mM
L-glutamine, penicillin (100 units/ml), and streptomycin
(100 µg/ml) in a humid atmosphere containing 5% CO2.
After 2 days, when the cells had grown to confluent monolayers,
C. perfringens phospholipase C (PLC) (32) was added at a
dose of 0.12 µg/ml, corresponding to 10 TCD50 (tissue
culture dose 50%) (23). After 1 week, the PLC was replaced with fresh
medium, and after less than 2 weeks more, one clone of revertant cells
was detected and expanded (denoted as CdtRQ-Rev and here
referred to as Don QR).
Don wt, Q, and QR were seeded in
96-well plates (500-1000 cells/well), cultivated to 90% confluency,
and exposed to serial 10-fold dilutions of C. difficile TcdB
(500 µg/ml) (33, 34) or C. novyi The uptake of
2-deoxy-D-[6-3H]-glucose was measured
essentially as described (37). Briefly, cells were cultivated in
96-well plates, rinsed three times with phosphate-buffered saline
(PBS), and incubated with
2-deoxy-D-[6-3H]-glucose (2 µCi/ml)
(Amersham Corp.) in glucose-free medium with or without cytochalasin B
(Sigma) (5 µg/ml). After 5, 10, 20, 25, and 35 min at 37 °C, the
cells were washed three times with ice-cold PBS and lysed in
situ by incubation with 10 µl of 0.4% SDS for 10 min.
Scintillation mixture (190 µl) (Hisafe, Wallac) was added, and the
radioactivity in the wells was counted in a microtiter plate
The metabolites were
extracted from confluent monolayers of three 75-cm2 cell
culture flasks (Nunc) of each cell line using a dual-phase extraction
method (38). The methanol-water phase was freeze-dried and resuspended
in a buffer with 8 mM Na2HPO4 and 2 mM KH2PO4, pH 7.2 (prepared with
D2O). The acquisition of the spectra was done as described
elsewhere (39). The chemical shifts were referred to
3-(trimethylsilyl)propionic-2,2,3,3-d4 acid (0 ppm).
UDP-Glc, UDP-GlcUA, UDP-Gal, Gal-1-P, and Glc-1-P were quantified by
integration of the double doublets assigned to the protons of the
anomeric carbon centered at 5.636, 5.618, 5.601, 5.493, and 5.453 ppm, respectively. UTP was quantified by integration of the doublet assigned
to the meta-uracylic proton centered at 7.975 ppm, whereas Glc-6-P was quantified by integration of the doublet assigned to the
proton of the anomeric carbon centered at 5.250 ppm. The amount of each
metabolite was related to the amount of cellular protein determined in
lysates from parallel flasks. All experiments were performed at least
twice.
The activity
of UDPG:PP was measured essentially as described (40). Briefly,
confluent cell monolayers, one 75-cm2 flask of each cell
line, were washed twice with PBS and mechanically removed. Cell pellets
were resuspended in 200 µl of lysis buffer (0.08 M
Tricine-HCl, 0.03% Triton X-100, 0.1 mM
phenylmethylsulfonyl fluoride (Sigma), 10 µg/ml leupeptin (Boehringer
Mannheim Scandinavia AB, Bromma, Sweden), pH 7.4)). Protein
concentration in cell lysates was determined as above. Cell lysates
(1-20 µg protein) were incubated with UTP (Sigma) (5 mM)
and [14C]-Glc-1-P (302 mCi/mmol) (Amersham Corp.) at
37 °C for 30 min. The reaction was stopped by heating to 100 °C
for 2 min. Residual [14C]-Glc-1-P was removed by
incubation with 0.5 units of Escherichia coli alkaline
phosphatase (Sigma) at 45 °C for 30 min. An aqueous suspension of
charcoal (20 mg/ml) was added to absorb the UDP-[14C]-Glc
formed, and after 10 min the charcoal was washed three times with
water. Finally, the charcoal pellets were extracted with 90 µl of
acetic acid (10%), and 2 ml of scintillation mixture was added before
counting. All experiments were performed at least twice, with three
replicate samples in each experiment.
Total RNAs from Don wt, Q, and QR
cells were isolated using the RNeasy kit from Qiagen GmbH (Hilden,
Germany), and the concentrations were determined spectrophotometrically
as absorbance at 260 nm. Reverse transcription was performed as
follows: 1.5 µg of the purified RNA was incubated with 2 µl of
oligo(dT) (50 µM) (the volume was adjusted to 10 µl
with distilled water) at 70 °C for 5 min and then chilled on ice.
Then 1 µl of avian myeloblastosis virus-reverse transcriptase (24 U/µl) (Seikagaku America Inc., Ijamsville, MD), 4 µl of dNTP (2.5 mM), 0.5 unit of ribonuclease inhibitor (40 units/µl)
(Boehringer), and 2 µl of 10 × reverse transcriptase-first
strand buffer were added, and the volume was adjusted to 20 µl with
distilled water. After heating the reaction mixture to 95 °C for 5 min and incubation for 60 min at 40 °C, the resulting cDNAs were
stored at For Northern blot
analysis the DNA fragment of the Chinese hamster UDPG:PP used as a
probe was obtained by PCR amplification with the same primers used for
semiquantitative RT-PCR. The fragment was run on a 1% low melting
temperature agarose gel, stained with ethidium bromide, excised under
UV transillumination, and purified using the BandPret kit (Pharmacia
Biotech Inc.). The purified fragment was then labeled with
[ Samples containing 20 µg of total RNA from each cell line were
denatured, run on low formaldehyde (2.5% v/v) agarose gels, and
blotted onto a positively charged nylon membrane (Pharmacia) by
capillary transfer, using 10 × SSC as transfer buffer. The membrane was cross-linked by 1-min exposure to low wavelength UV, and
prehybridizations were performed for 1-2 h at 55 °C in Rapy-hyb
buffer (Amersham Corp.). Hybridizations were performed at 55 °C for
18-20 h as described (41). The membrane was washed three times in
1 × SSC/1% SDS for 20 min at room temperature. Hybrid bands were
detected using a PhosphorImager (Molecular Dynamics Inc., Sunnyvale,
CA), and radioactivity was quantified using the Image Quant Program
(Molecular Dynamics Inc.).
For Western blot analysis confluent cell monolayers were washed twice
with PBS and mechanically removed. Cell pellets were resuspended in 200 µl of 0.4% SDS containing 0.1 mM phenylmethylsulfonyl fluoride and 10 µg/ml leupeptin. Protein concentration in cell lysates was determined as above. Cell lysates (30 µg protein/lane) were submitted to electrophoresis under reducing conditions on a
SDS-polyacrylamide gel (42) (10% w/v), and separated proteins were
electroblotted (43) on to 0.45-µm nitrocellulose membrane (Bio-Rad).
The nitrocellulose membrane was saturated with 2% bovine serum albumin
and 0.1% Nonidet P40 in PBS (blocking solution) for 2 h at room
temperature before a 2-h incubation with rabbit antibodies against
potato UDPG:PP in blocking solution. Unbound antibodies were removed by
washing four times (5-10 min each) with blocking solution before
incubation with an anti-rabbit IgG-alkaline-phosphatase conjugate (Dako
A/S, Glostrup, Denmark) for 2 h at room temperature. The
nitrocellulose membrane was washed as described above and incubated
with nitro blue tetrazolium (Sigma) (250 µg/ml) and 5-bromo-4-chloro-3-indolyl phosphate (Sigma) (56 µg/ml) in 500 mM NaCl, 20 mM Tris buffer, pH 7.5. Immunoreactive bands were detected using a densitometer and quantified
using the Image Quant Program.
The PCR-amplified
products were purified as described above. Sequence analysis was
performed on the GeneAmp PCR System 9600 using the Applied Biosystems
PrismTM dye terminator cycle sequencing kit (Perkin-Elmer/Applied
Biosystems Division, Foster City, CA) according to the manufacturer's
instructions. Briefly, 10-30 ng/µl (3-6 µl) of the gel-purified
PCR product were added to a MicroAmpTM reaction tube (Perkin-Elmer)
containing 3.2 pmol of sequencing primer, 8.0 µl of premixture
(containing buffer, dNTPs, dye-labeled ddNTPs and AmpliTaq), and
distilled water to a final volume of 20 µl. After the initial
denaturation at 96 °C for 2 min, the reaction mixture was incubated
for 25 cycles at 96 °C for 10 s, 50 °C for 5 s, and
60 °C for 4 min. Sequence analysis was performed on both strands.
The sequencing primers were designed according to the sequence of the
human UDPG:PP cDNA. For the coding strand they were:
5 A
multiple sequence alignment was performed using the program Clustal W
(44). Secondary structure elements were predicted (45) and summarized
for each alignment position. Hydropathy plots were calculated using a
sliding 6-residue window (46). Motifs (47) were defined as regions with
at least 11 strictly conserved residues among 30 consecutive positions.
The molecular modelling and picture of the model were made with the ICM
program (version 2.6, 1996, Molsoft, Metuchen, NJ).
Don Q is
104 times more resistant to the TcdB-induced cytopathogenic
effect and 105 times more sensitive to the cytotoxic effect
of PLC than Don wt (23). By culturing Don Q in the presence of PLC, we
isolated a revertant cell, Don QR, which has regained the sensitivity
to TcdB and the relative resistance to PLC displayed by Don wt (Fig. 2A and data not shown).
Because Don Q has a deficiency of UDP-Glc, a metabolite required for
the entry of galactose into glycolysis (Fig.
1), we compared the ability of the three
cell lines to grow on galactose as the only energy source. Don QR grew
almost equally well as Don wt, whereas Don Q was not able to survive
under this condition (not shown). The regained TcdB sensitivity of Don
QR and its capacity to metabolize galactose indicated that the UDP-Glc
deficiency in Don Q was at least partially compensated in Don QR. In
this work we used the cell lines Don wt, Q, and QR to determine the reason for the low UDP-Glc level in Don Q.
To determine whether Don Q has a general deficiency in UDP-hexoses, its
sensitivity to C. novyi The facilitated diffusion of glucose
across the plasma membrane is a limiting step in the synthesis of
UDP-Glc and glycogen (49-51). Therefore, the uptake of 2-deoxyglucose,
a nonmetabolizable glucose analogue, was measured in the three cell
lines (Fig. 3). The 2-deoxyglucose uptake
in Don Q and Don wt was the same, whereas in Don QR it was slightly
increased. This result indicated that the low level of UDP-Glc in Don Q
is not due to a defective glucose uptake.
The cellular levels of
the metabolites of the UDP-hexose pathways in the three cell lines were
measured by 1H NMR spectroscopy (Table
I). The UDP-Glc level in Don Q was 26%
of that in Don wt, in agreement with our previous measurement using
reverse phase high pressure liquid chromatography (24). Furthermore,
Don QR was found to have a UDP-Glc level of 64% of that found in Don
wt. This result indicated that the UDP-Glc deficiency of Don Q has been
only partially compensated in Don QR. In agreement with this, the level
of UDP-GlcUA in Don QR lay between those of Don wt and Don Q (Table
I).
Table I.
Levels of glucose metabolites in Don wt, Q, and QR cells
The assignments of the proton on the anomeric carbon of UDP-Gal and
Gal-1-P to double doublets in the region from 5.7 to 5.4 ppm of the the
1H NMR spectra were performed for the first time (Fig.
4A). Don Q has the highest
level of Gal-1-P and the lowest level of UDP-Gal compared with Don wt
and QR (Table I), indicating an impaired capacity to interconvert these
metabolites. The low UDP-Glc level in Don Q explains this impairment,
because UDP-Glc is a required cofactor for this interconversion (Fig.
1).
When glucose is incorporated into a cell, it is immediately
phosphorylated to Glc-6-P by hexokinases (52) and two steps later
converted to UDP-Glc (Fig. 1). The three cell lines showed similar
levels of Glc-6-P (Table I), indicating that the synthesis of this
metabolite is not impaired in Don Q. Normally, the cellular level of
UDP-Glc reflects the concentration of Glc-6-P (52). However, Don Q has
a lower level of UDP-Glc than Don wt and QR, despite having the same
Glc-6-P concentration. This finding indicates that there is an
impairment in the UDP-Glc synthesis in a step downstream of Glc-6-P.
Because the level of Glc-1-P in Don Q was not lower than in Don wt and
QR (Table I), we concluded that the reaction catalyzed by
phosphoglucomutase is not impaired in Don Q. The three cell lines
showed a similar level of UTP (Table I), confirming that there is no
deficiency of this precursor. Our results therefore indicated that the
low level of UDP-Glc in Don Q is not due to a deficiency in Glc-6-P,
Glc-1-P, or UTP. Because Don Q has altered levels of Glc-1-P and
UDP-Glc compared with Don wt and QR, we decided to measure the activity
of UDPG:PP, the enzyme that interconverts these metabolites.
The activity of UDPG: PP
was measured in the three cell lines. Don Q showed 4% and Don QR
showed 56% of the UDPG:PP activity found in Don wt (Table
II). These results indicated that Don Q has an impaired capacity to synthesize UDP-Glc, which has been partially restored in Don QR. In agreement with this, the UDP-Glc level
in Don QR lay between those found in Don wt and Q (Table I). The
residual UDPG:PP activity in Don Q together with an increased production of Glc-1-P may explain why the UDP-Glc level is not lower
than 26% in this cell. We conclude that the reason for the UDP-Glc
deficiency in Don Q is a defect in its production, because of a lowered
UDPG:PP activity. This conclusion has been further substantiated by the
finding that Don Q cells transfected with the bovine UDPG:PP cDNA
were reverted with respect to their response to
TcdB.2
Table II.
Activity of UDPG:PP in Don wt, Q, and QR cells
The lowered UDPG:PP activity in Don Q and QR could result from a decreased gene transcription, an increased mRNA degradation, or a mutation in the coding region of the gene. The amount UDPG:PP mRNA in Don wt, Q, and QR was similar, as determined by semiquantitative RT-PCR and Northern blot (not shown). Furthermore, the amount of UDPG:PP was also similar in the three cell lines, as determined by Western blot analysis using polyclonal antibodies against the potato enzyme (not shown). These results suggested that the low UDPG:PP activity in Don Q is not due to a decreased gene transcription or an increased mRNA degradation. Therefore, we decided to establish the complete nucleotide sequence of the UDPG:PP cDNAs from the three cell lines to determine whether there was a mutation in the coding region of the gene associated with the low enzymatic activity. Sequence Analysis of Chinese Hamster UDPG:PP cDNAIn this
work, we established the nucleotide sequence of the Chinese hamster
UDPG:PP cDNA for the first time. The deduced amino acid sequence of
the corresponding protein consists of 507 amino acid residues and shows
homology with other eukaryotic UDPG:PPs (Fig.
5).
Fig. 5. Sequence alignment of Chinese hamster UDPG:PP with eight other eukaryotic UDPG:PPs. Alignment of UDPG:PP amino acid sequences from Chinese hamster (GenBankTM AF004368), human (Swissprot Q07131), porcine (GenBankTM X99312), bovine (Swissprot Q07130), barley (GenBankTM X91347), potato (Swissprot P19595), yeast (Swissprot P32861), slime mold (Swissprot P08800),and Caenorhabditis elegans (GenBankTM U58727). The strictly conserved residues are given against a black background, and those conserved in at least six enzymes are given against a gray background. The three motifs, as defined under "Experimental Procedures," are indicated by the horizontal lines. The numbers at the top give alignment position corresponding to the numbers in Fig. 7. [View Larger Version of this Image (102K GIF file)]
A comparison of the complete cDNA sequences from the three cell
lines was performed. Don Q cDNAs have one single point mutation, a
guanine to adenine transition at position 347 of the coding sequence
(Fig. 6A), which changes amino
acid residue 115 from glycine to aspartic acid. This glycine residue is
strictly conserved among eukaryotic UDPG:PPs (position 133 in the
alignment of Fig. 5).
Fig. 6. Chromatograms showing sequence analysis of UDPG:PP cDNAs from Don wt, Q, and QR cells. Nucleotides at positions 344-350 of the coding region are shown for the positive strand (A) and the corresponding positions for the negative strand (B). Position 347 in A shows the guanine to adenine substitution in Don Q cDNAs. An equimolar mixture of both nucleotides is observed in Don QR cDNAs at the same position. [View Larger Version of this Image (38K GIF file)]
The type of mutation found in the UDPG:PP gene in Don Q was the expected according to the agent used to generate this mutant cell. Ethyl methanesulfonate is a monoalkylating agent, which favors guanine to adenine transitions (53-55). This agent ethylates guanine nucleotides at the O-6 position creating a modified nucleotide that pairs preferentially with thymidine rather than cytosine (56, 57). During the following replication round this change places an adenine in the coding strand. Sequence analysis of cDNAs from Don QR showed an equimolar mixture of guanine and adenine at position 347 (Fig. 6A). Corresponding results were obtained by sequencing the noncoding strand (Fig. 6B). The sequence analysis data strongly suggest that the mutation is present in homozygous form in Don Q and is reverted in only one of the alleles in Don QR. In agreement with this, the enzymatic activity of UDPG: PP in Don QR lies between those of Don wt and Don Q (Table II). We conclude that the G115D substitution is responsible for the impairment in the UDPG:PP activity and thereby for the UDP-Glc deficiency in Don Q. Multiple Sequence Alignment and Structural PredictionsThe
primary structure of several eukaryotic UDPG:PPs has been reported
(58-64), but the three-dimensional structure has not been determined
for any of them. We compared the sequences of all known eukaryotic
UDPG:PPs to identify the conserved residues, which should correspond to
those important for the structure/function of these enzymes. Alignment
of nine UDPG:PPs revealed a pairwise residue identity of 97.0-99.6%
between mammalian UDPG:PPs and 33.0-53.7% between mammalian and
nonmammalian enzymes. There are 89 residues strictly conserved among
UDPG:PPs from a variety of evolutionary diverse organisms (Fig. 5).
Most of the conserved residues are glycine (16 glycine residues are
invariant), a typical finding in proteins with similar
three-dimensional structure (65-67). There is no strong similarity
between the UDPG:PPs from plants, mammals, and fungi in the first 120 residues of the N-terminal regions. The strictly conserved residues are
grouped into short segments distributed throughout the rest of the
polypeptide chains (Figs. 5 and 7). Three
clearly defined motifs (47) can be identified at alignment positions
129-159, 262-292, and 414-444 (Figs. 5 and 7). A strictly conserved
lysine located within the third motif (at position 443 in the alignment
shown in Fig. 5) has been shown to be essential for the UDPG:PP
activity of the potato enzyme (68).
Fig. 7. Summarized secondary structure predictions, schematic view of residue conservation, and superimposed hydropathy profiles for nine eukaryotic UDPG:PPs. The top three bar graphs show the summarized secondary structure predictions (Alpha, -helix; Beta, -pleated sheet; and Turn,
reverse turn) (45) for the UDPG:PPs included in the alignment shown in
Fig. 5. The heights of the bars are proportional to the number of
structures with identical prediction. The fourth bar graph shows
residues strictly conserved (Cons.) through all nine
enzymes. The bottom graph gives superimposed hydropathy profiles (46)
of the UDPG:PPs included in the alignment of Fig. 5. The
numbers on the horizontal axis correspond to the
alignment positions.
[View Larger Version of this Image (59K GIF file)]
Predictions of secondary structure were performed and summarized (Fig. 7) for the nine eukaryotic UDPG:PPs included in the alignment of Fig. 5. The similarities in the predicted secondary structures cover most of the entire sequences (Fig. 7). Hydropathy curves for the known eukaryotic UDPG:PPs were superimposed (Fig. 7). The agreements between the hydropathy curves are also extensive, with largely parallel patterns at segments covering alignment positions 120-240, 270-390, and 410-470 (Fig. 7). Taken together, the similarities in the sequences, predicted secondary structures, and hydropathy curves suggest that all eukaryotic UDPG:PPs have a similar three-dimensional structure. Effect of the G115D SubstitutionAccording to the secondary structure predictions of eukaryotic UDPG:PPs (Fig. 7), the segment encompassing alignment positions 132-143 constitutes a reverse turn. The conserved glycine substituted by the mutation found in Don Q UDPG:PP is located at this predicted turn. The secondary structure prediction (45) was not changed in the mutated enzyme (not shown). In contrast, comparison of hydropathy plots (46) of the wild type and the mutated sequences showed that the substitution causes a local shift toward a lower hydrophobicity (not shown). The largest segment of strictly conserved residues among eukaryotic
UDPG:PPs (KLNGGLG) encompasses alignment positions 129-135 (Figs. 5
and 7). Three out of these seven residues are glycine, which indicates
stringent space restrictions (69), suggesting structural/functional
importance of this stretch. The point mutation found in Don Q UDPG:PP
substitutes the second glycine of the 129-135 stretch. Interestingly,
a part of this sequence (NGGLG) binds Glc-1-P and comprises part of the
active site in glycogen phosphorylases and E. coli
maltodextrin phosphorylase (70-72). The three-dimensional structure of
the active site peptides NGGLG (Fig.
8A) superimpose precisely in
these enzymes (73). In glycogen phosphorylase, the second glycine of
this peptide (Gly-135) makes two hydrogen bond contacts with Glc-1-P
(72). The sequence identity between these conserved stretches of
phosphorylases and UDPG:PPs raises the possibility that the stretch
NGGLG is also part of the Glc-1-P binding site in eukaryotic
UDPG:PPs.
Fig. 8. Three-dimensional structure of the active site peptide NGGLG of glycogen phosphorylase. Shown is the structure of the wild type peptide, which was determined by x-ray crystallography (72) (A) and model of the mutated peptide where Gly-135 has been substituted by Asp (red) (B). The protein backbone is colored light yellow, the Glc-1-P is light blue, and the pyridoxal phosphate is magenta. Space restrictions in the model are visible between the Asp, the Glc-1-P, and the pyridoxal phosphate. The modelling was made with the program ICM (version 2.6, Molsoft). [View Larger Version of this Image (17K GIF file)]
Molecular modelling of a G135D substitution in glycogen phosphorylase (Fig. 8B) shows that space restrictions would occur at the active site due to its interaction with the Glc-1-P and the pyridoxal phosphate. Assuming that the NGGLG stretch in the Chinese hamster UDPG:PP has a similar conformation to that of glycogen phosphorylase, the steric hindrance caused by the G115D substitution would explain the impaired activity of the mutated enzyme. Alternatively, Gly-115 may be important for the local flexibility and/or conformational stability of UDPG:PPs. Regardless of the molecular mechanism, our data demonstrate that the change in the bulky side chain of residue 115 and the additionally introduced negative charge of the aspartic acid have a significant effect on the UDPG:PP activity. Furthermore, they suggest that the conserved Gly-115 has an important role for the activity of these enzymes. Concluding RemarksIn the Chinese hamster UDPG:PP gene we have identified a point mutation (G115D) that dramatically impairs the enzymatic activity of the protein product, leading to a persistently low UDP-glucose level. UDP-glucose deficiency occurs in insulin-dependent tissues of diabetic organisms (16-18), and the consequences of this deficiency have not been established. A low level of UDP-Glc also occurs in cultured cells incubated under low glucose concentration (19-22) or hypoxia (8, 9), two of the hallmarks of ischemia. We hypothesize that a low UDP-Glc level occurs in ischemic tissues and suggest that the cells Don Q and QR constitute an excellent model to determine the molecular consequences of a UDP-Glc deficiency. * This work was supported by grants from the Swedish Medical Research Council (16X-05969 and 03P-11312), the Swedish Cancer Society (3826-B96-01XAB), the Magnus Bergvall Foundation, and the Karolinska Institutet Research Funds.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact. The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) AF004368.
Recipient of a fellowship from the Karolinska International
Research Training Program.
¶¶ To whom correspondence should be addressed. Tel.: 46-8-728-71-62; Fax: 46-8-33-15-47; E-mail: monica.thelestam{at}mtc.ki.se. 1 The abbreviations used are: UDP-Glc, UDP-glucose; UDPG:PP, UDP-glucose pyrophosphorylase; UDP-GlcUA, UDP-glucuronic acid; Glc-6-P, glucose-6-phosphate; Glc-1-P, glucose-1-phosphate; Gal-1-P, galactose-1-phosphate; UDP-Gal, UDP-galactose; Fru-6-P, fructose-6-phosphate; TcdB, C. difficile toxin B; PLC, C. perfringens phospholipase C; PBS, phosphate-buffered saline; Tricine, N-[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]glycine; RT, reverse transcription; PCR, polymerase chain reaction. 2 M. Flores-Díaz, A. Alape-Girón, M. Moos, P. Pollesello, C. von Eichel-Streiber, M. Thelestam, and I. Florin, manuscript in preparation. We thank L. Norenius and K. Gell for skillful
technical assistance, Dr. M. Giry (Johannes
Gutenberg-Universität, Mainz) for providing C. novyi
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