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Volume 272, Number 40,
Issue of October 3, 1997
pp. 25112-25120
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.
Transgenic Analyses Reveal Developmentally Regulated Neuron-
and Muscle-specific Elements in the Murine Neurofilament Light
Chain Gene Promoter*
(Received for publication, December 18, 1996, and in revised form, June 13, 1997)
Paul J.
Yaworsky
,
David P.
Gardner
and
Claudia
Kappen
§
From the Samuel C. Johnson Medical Research Center, Mayo Clinic
Arizona, Scottsdale, Arizona 85259
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
ABSTRACT
We report here the developmental activity of
regulatory elements that reside within 1.7 kilobases of the murine
neurofilament light chain (NF-L) gene promoter. NF-L promoter activity
is first detected at embryonic day 8.5 in neuroepithelial cells.
Neuron-specific gene expression is maintained in the spinal cord until
embryonic day 12.5 and at later developmental stages in the brain and
sensory neuroepithelia. After day 14.5, the promoter becomes active in myogenic cells. Transgene expression in both neurons and muscle is
consistent with the detection of endogenous NF-L transcript in both
neuronal and myogenic tissues of neonates by reverse
transcriptase-polymerase chain reaction. Neuron- and muscle-specific
activities of the NF-L promoter decrease and are nearly undetectable
after birth. Thus, the 1.7-kilobase NF-L promoter contains regulatory
elements for initiation but not maintenance of transcription from the
NF-L locus. Deletion analyses reveal that independent regulatory
elements control the observed tissue-specific activities and implicate a potential MyoD binding site as the muscle-specific enhancer. Our
results demonstrate that the NF-L promoter contains distinct regulatory
elements for both neuron- and muscle-specific gene expression and that
these activities are temporally separated during embryogenesis.
INTRODUCTION
Neurofilaments (NFs)1
are a class of intermediate filaments that comprise the major
cytoskeletal component of differentiated neurons. The mature filaments
are assembled from three polypeptide subunits: light (NF-L), medium
(NF-M) and heavy (NF-H) (for review, see Ref. 1). Each subunit is
encoded by a distinct gene and is regulated differently during
development, with NF-L and NF-M being expressed early at the time of
neuronal cell differentiation and NF-H expressed much later (2,
3). The levels of NF gene expression are low during embryonic
development with an up-regulation of transcriptional activity at
postnatal time points (4-6). The neuronal selectivity of
neurofilaments has resulted in numerous studies aimed at identifying
molecular mechanisms that regulate NF gene expression in neurons;
nevertheless, little is understood about these processes.
One approach to elucidate the regulation of gene expression is to fuse
the genetic elements of interest to a reporter gene and monitor its
expression in transfected cells or transgenic mice. In this way, the
5 -promoter regions of both the mouse and human NF genes have been
shown to contain multiple positive and negative regulatory sites
(7-10). However, in vivo attempts to identify
neuron-specific elements within NF genes in transgenic mice have proven
difficult (9, 11-16). For example, one report claims that 300 bp of
the human NF-L gene promoter sequence are sufficient for neuronal
expression (9) while another report finds this region insufficient for
neuron specificity (11). Such discrepancies have been interpreted as a
relative weakness of the NF-L gene promoter regions in combination with
a requirement for intragenic regulatory elements (9, 11, 16-18).
Further complications in understanding the tissue specificity of NF
gene expression arise from in vitro studies that report
efficient expression of either reporter genes, or NF genes themselves,
under the control of various NF promoters when transfected into
non-neuronal cells (7, 13, 19-23). In addition, the identification of
elements in the mouse NF-L gene 3 -untranslated region that stabilize
the NF-L mRNA transcript suggests that both transcriptional and
post-transcriptional mechanisms play a role in NF gene expression
(24).
The majority of these in vivo studies were conducted in
adult mice and do not address the developmental regulation of NF gene expression during embryogenesis. We reasoned that the initiation of
transcription during development was a crucial step in attaining neuron-specific gene expression. As a model, we chose the promoter from
the murine NF-L gene that has previously been used to direct the
neuronal expression of several transgenes in adult animals (25-28). In
this study, we directed embryonic expression of a lacZ reporter gene under the control of the murine NF-L promoter using a
2-tiered system of gene regulation in transgenic mice (25, 29).
Expression of the reporter transgene in this system is dependent on the
potent viral transcriptional transactivator, VP16. We report here the
developmental activity, structure, and identification of critical
tissue-specific regulatory regions of the murine NF-L gene promoter.
Our results demonstrate that 1.7-kb upstream of the mouse NF-L promoter
contain temporally separable and distinct enhancer elements that
regulate transcription in neuronal and myogenic tissues during
embryonic development.
EXPERIMENTAL PROCEDURES
Generation of Transgenic Mice
Transgenic mice were
established following the standard protocols described in Hogan
et al. (30). The NF-TIF4 and IE-LacZ16 transgenic mouse
lines have been previously described (25, 29), and all other lines were
newly generated. The plasmid NFL-TSV (a gift from G. Byrne, Nextran,
Inc., Princeton, NJ) was created by ligating the 0.87-kb
SalI/BamHI fragment containing the SV40 virus
splice region, intron and poly(A) site (pMSG, Pharmacia Biotech Inc.)
into the EcoRI site of pNF-TIF (25). The resulting insert
DNA was released by a ClaI/BamHI restriction
digest. Upon complete digestion, the DNA fragment was purified over a
20-40% sucrose gradient in a near vertical rotor and dialyzed
extensively against 10 mM Tris-Cl, pH 7.3, 0.25 mM EDTA.2
Purified DNA was diluted to a final concentration of 1.5-2.0 µg/ml
for microinjection. FVB mice (31) were used for microinjection and CD-1
mice were used as foster mothers.
Identification of Transgenic Mice
Genomic DNA from
potentially transgenic founder mice was purified from tail biopsies
(32). The polymerase chain reaction (PCR) was used to identify
transgenic mice by virtue of the presence of the VP16 gene. A 494-bp
VP16-specific PCR product was amplified using the primers
5 -CTATGTACCATGCTCGATACCTGGA-3 and 5 -CCATAGGATCTCGCGGGTCAAAAAT-3 for
35 cycles (30 s at 94 °C, 1 min at 60 °C, 30 s at 72 °C). DNA from PCR-identified founder animals was subjected to Southern blot
hybridization to determine transgene copy number and to ascertain the
integrity of the transgene (33). Samples were hybridized with a
digoxygenin-labeled 1.2-kb SalI probe corresponding to the
VP16 gene. Specific hybridization was detected using the Genius system
(Boehringer Mannheim).
Embryo Isolation and -Galactosidase Staining
Embryos at
various developmental stages were isolated after natural matings. The
morning of the presence of a vaginal plug was designated as 0.5 days
post-coitum (dpc). The embryos were removed from the uterus and rinsed
in phosphate-buffered saline (PBS). The yolk sac was separated from
each embryo and used as a source of embryonic genomic DNA for PCR
analyses. Embryos younger than 9.5 dpc were fixed in 4%
paraformaldehyde in PBS for 30 min at 4 °C, those between 10.5 and
12.5 dpc were fixed for 2 h, and those older than 13.5 dpc were
fixed for 4 h. The fixative was rinsed away with three washes of
15 min at 37 °C in a substrate buffer containing 100 mM
NaH2PO4, pH 7.3, 2 mM
MgCl2, 0.1% deoxycholate, 0.2% Nonidet P-40. Staining
proceeded in the same buffer supplemented with 5 mM
K3Fe(CN)6·3H2O, 5 mM
K4Fe(CN)6, and 1 mg/ml
5-bromo-4-chloro-3-indolyl -D-galactopyranoside (X-gal).
The staining reaction was incubated for 2 h at 37 °C and was
monitored by the appearance of staining in the apical ectodermal ridge
of embryos from the IE-LacZ16 line. This ectopic staining served as an
internal control for the -galactosidase staining reaction and is
independent of VP16 transactivation (29). The staining was stopped by
rinsing with PBS and post-fixing in 4% paraformaldehyde, 0.25%
glutaraldehyde in PBS. Embryos were dehydrated in increasing gradations
of ethanol and cleared in xylene. Photographs were taken with a 35-mm
camera (Wild) on a Leica Stereo Zoom M3Z microscope. Histologic
sections were obtained by embedding the embryos in paraffin wax and
microtome sectioning at 10 µm thickness. Sections were analyzed and
photographed with a Leica DMRB microscope.
RNA Isolation and Reverse Transcriptase-PCR
RNA was
prepared from newborn mice 10 days after birth. Brain, spinal cord,
muscle, skin, liver, spleen, kidney, and heart tissues were isolated
and flash frozen in liquid nitrogen. The tissue was thawed in the
presence of Tri Reagent (Molecular Research Center, Cincinnati, OH) and
homogenized. Total RNA was prepared according to the manufacturer
specifications. Contaminating DNA was removed by treating 2 µg of
each RNA sample with DNaseI (Life Technologies, Inc.) in the presence
of RNase Inhibitor (CLONTECH). First strand
cDNA synthesis proceeded with 500 ng of RNA using the primers
dT16VA, dT16VT, dT16VG, and
dT16VC (12.5 µM each), where V = G, C,
or A, and 100 units of Superscript II reverse transcriptase (Life
Technologies, Inc.) for 50 min at 40 °C, 15 min at 70 °C. The
manufacturer protocols were followed for all enzymatic reactions. For
each primer set, a one-twentieth volume of cDNA was subjected to
PCR amplification using cycling conditions identical to those stated
above for 33 cycles. When primers were used to detect -actin, 30 total cycles were used. Positive and negative control samples were
carried out for each amplification reaction. The primers used were
VP16 (5 -CAACTGACGCCAGCTCTCCAGGTCGC-3 and
5 -CTCGTTTCTTCCACGCCGAGCTAC-3 ), lacZ
(5 -ACCGAATTCAGTTGGTCTGGTGTC-3 and 5 -GTGAAGCTTGTGATGCTATTGCTT-3 ),
NF-L (5 -AGCAGAATGCAGACATTAGCGCC-3 and
5 -TGGTCTCTTCGCCTTCCAAGAGT-3 ), and -actin
(5 -GTGGGCCGCTCTAGGCACCA-3 and 5 -TGGCCTTAGGGTGCAGGGGG-3 ).
Amplification products were separated by 1% agarose gel
electrophoresis and visualized by ethidium bromide staining. Three
independent cDNA preparations were analyzed.
Sequence Analysis of the NF-L Promoter
The sequence of the
murine NF-L promoter was obtained using the plasmid NFL-TSV as a
double-stranded DNA template. This plasmid contains 1.7 kb of the mouse
NF-L promoter ( 1.6-kb HindIII/+74 SmaI).
Automated DNA sequencing was performed on an Applied Biosystems 373A
DNA Sequencer (Foster City, CA). Primers were specifically designed to
provide sequence data from both DNA strands. Subsequent sequence
analyses were carried out using the programs of the University of
Wisconsin Genetics Computer Group (Madison, WI) and McMolly Tetra (Soft
Gene GmbH, Berlin).
Generation of Deletions within the NF-L Promoter
The
plasmid NFL-TSV was linearized by ClaI digestion. Deletions
within the NF-L promoter were subsequently generated by partial digestion with one of the following enzymes: HaeII (at base
1215), BstXI (base 941), NspI (base 524),
and NruI (base 328). The fragment of interest was purified
from agarose gels and used to generate transgenic embryos as described
above. Embryos were isolated at 13.5 dpc and stained for
-galactosidase activity as described previously.
RESULTS
The Neurofilament Light Chain Gene Promoter Directs lacZ Expression
in a Binary Transgenic Mouse System
To examine the developmental
activity of the murine neurofilament light chain gene promoter, we have
employed a binary system of gene expression in transgenic mice (25,
29). This system (Fig. 1A)
consists of two independent transgenic components. One transgenic
parent, the transactivator, carries the gene for the transcriptional
activator VP16 from herpes simplex virus under the control of the
1.7-kb murine NF-L promoter. The second transgenic parent, the
transresponder, provides the reporter gene, lacZ, linked to
the viral immediate early (IE) ICP4 gene promoter. The IE promoter
contains the response elements for VP16-mediated transactivation but is
not transactivated in the absence of VP16 (25, 29). Progeny that
receive both transgenes will exhibit lacZ expression in
those cells where the NF-L promoter is active. The structure of the
transgene DNA constructs used in these studies is presented in Fig.
1B.
Fig. 1.
Multiplex system of gene regulation in
transgenic mice. A, the VP16-based binary transgenic system
principally consists of two independent strains of transgenic mice (25,
29). One transgenic parent, the transactivator, carries a transgene
encoding the herpes simplex virus transcriptional activator, VP16,
under the control of a specific promoter (striped mouse).
Here, the murine NF-L promoter is used to specifically express VP16 in
neurons. The second transgenic parent, the transresponder, harbors the lacZ reporter gene downstream of the VP16 IE-response
element (shaded mouse). The IE promoter is silent in the
absence of VP16. Therefore, expression of the gene of interest will
only occur in offspring that receive a copy of both transgenes
(striped and shaded mouse). B,
structure of DNA fragments used to generate transgenic mice. Several
independent NFL-TSV transgenic mouse lines were generated.
NF-L, 1.7-kb murine neurofilament light chain gene promoter;
SV40 intron/poly(A), polyadenylation signal and splice
acceptor site from SV40 virus (Pharmacia); IE, immediate early promoter from the ICP4 gene of herpes simplex virus.
[View Larger Version of this Image (21K GIF file)]
Previous studies, using an IE-CAT transresponder mouse mated with the
NF-TIF4 transactivator line, demonstrated CAT activity in homogenates
of the brain and spinal cord of double transgenic adult progeny (25).
We identified and established six NFL-VP16 mouse lines with the ability
to transactivate the expression of an IE-LacZ transresponder gene. The
activity of each NFL-VP16 transgene was ascertained by mating a male
NF-L-transactivator to a female IE-LacZ16 mouse. Embryos were isolated
at 10.5 dpc, and their genotypes were determined by PCR using
transgene-specific primers on yolk sac genomic DNA (not shown).
Transgenic progeny from several independent NF-L-transactivators showed
the same pattern of expression of the IE-LacZ transgene. All six
independent NF-L-transactivator lines produced identical staining
patterns, indicating that lacZ expression reproducibly
reflected the activity of the NF-L promoter (data not shown). With each
of these transactivator lines, -galactosidase activity was
restricted to the cells of the developing brain and spinal cord. These
results demonstrate that expression of the IE-LacZ transresponder
transgene was specifically activated in the nervous system when an
NFL-VP16 transactivator transgene was present. In addition, they reveal
that the 1.7-kb NF-L promoter is active in embryogenesis and
reproducibly directs reporter gene expression in the developing nervous
system.
The 1.7-kb Murine Neurofilament Light Chain Gene Promoter Is Active
and Neuron-specific Early during Neurogenesis
To elucidate the
onset and progression of NF-L promoter activity in the nervous system,
we isolated embryos from crosses between NF-L-transactivators and
IE-LacZ16 transresponders at different stages of development. Fig.
2 depicts representative embryos carrying both transgenes. Both whole-mount embryo stainings and histologic sections from paraffin-embedded embryos were analyzed. The NF-L promoter first became active at 8.5 dpc when -galactosidase activity was restricted to neuroepithelial cells (Fig. 2A). No
promoter activity was detected in embryos isolated at 6.5 or 7.5 dpc
(not shown). At 9.5 dpc (Fig. 2B), staining was restricted
to the developing nervous system. In the brain, staining was observed
in the neuroepithelium of the hindbrain, the midbrain, and weakly in
the forebrain (Fig. 2B). LacZ activity could also be
detected in hindbrain rhombomeres as well as the trigeminal (V) and
facial-acoustic (VII-VIII) complexes on histologic sections of the
embryo (not shown). The neuroepithelium of the spinal cord exhibited
-galactosidase activity throughout its entire anterior-posterior
axis (Figs. 2B and 3A). This staining pattern
persisted at 10.5 dpc with increased activity in the mid- and forebrain
(Fig. 2C). Both the trigeminal and facial-acoustic ganglia
were stained, as were the primitive optic apparatus and the otocysts
(not shown). The neural tube continued to stain as did the early
condensations of presumptive neural crest cells. The latter cells,
which give rise to dorsal root ganglia, could be seen adjacent to the
neural tube at the level of the forelimb bud (not shown). Neural tube
staining appeared stronger in more ventral regions (Fig.
3B). There was little
difference in the staining pattern at 11.5 dpc in whole-mount embryos;
-galactosidase activity was observed in the midbrain and forebrain
(not shown). The trigeminal ganglion and the retina were also
positively stained. In the developing spinal cord, the number of
stained cells decreased (compare Fig. 3, B and C)
and remained mostly confined to cells of the ventricular layer. Cells
in the dorsal root ganglia were also stained (Fig. 3C).
However, by 12.5 dpc, -galactosidase activity within the nervous
system was noticeably weaker (Fig. 2D). The walls of the
hindbrain, midbrain, and forebrain continued to stain, and cells of the
trigeminal ganglia, retina, and roof of the neopallial cortex were also
positive (not shown). Within the spinal cord at the mid-trunk region
(Fig. 2D), staining persisted in neuroepithelial cells in
ventrally and, weakly, in dorsally located areas (Fig. 3D).
Some cells in the dorsal root ganglia also exhibited -galactosidase
activity (Fig. 3D). Similar staining patterns were observed
with at least three different, independently derived NFL-transactivator
lines. These results demonstrate that the 1.7-kb NF-L promoter
specifically directs transgene expression to neuroepithelial cells.
Fig. 2.
Temporal progression of lacZ
reporter gene expression under control of the NF-L promoter. The
double transgenic embryos are the result of matings between NF-TIF4
transactivators and IE-LacZ16 transresponders. Embryos were
isolated at 8.5 (A), 9.5 (B), 10.5 (C), and 12.5 (D) dpc. Specific -galactosidase
activity is detected within the developing nervous system during
early embryogenesis.
[View Larger Version of this Image (97K GIF file)]
Fig. 3.
-galactosidase activity within cells of
the spinal cord. Histologic sections were obtained at a thickness
of 10 µm from paraffin-embedded embryos. Cross-sections are through
the anterior neural tube of embryos isolated at 9.5 (A),
10.5 (B), 11.5 (C), and 12.5 (D) dpc.
-galactosidase activity is detected only within nervous tissue. As
development proceeds, there is a general decrease in lacZ
expression within the neural tube. By 12.5 dpc, -galactosidase
activity is restricted to only a few neuroepithelial cells in the
spinal cord with stronger intensity in more ventral regions. Staining
within the dorsal root ganglia also declined with only a small number
of stained cells detectable by 12.5 dpc.
[View Larger Version of this Image (121K GIF file)]
We further characterized the developmental activity of the NF-L
promoter by examining -galactosidase activity in embryos at later
stages. At 14.5 dpc, neuron-specific -galactosidase activity
persisted in several developing sensory organs (Fig. 4). Both retinal neurons and cells of the
developing lens exhibited staining. Fig. 4A depicts intense
retinal staining and weaker lens staining in a section from an
NFL-TSV207 transactivator, and Fig. 4B depicts strong lens
and optic nerve staining while the retina was only weakly positive when
an NFL-TSV6 transactivator was used. Despite differences in staining
intensities, identical tissues were consistently positive for
lacZ expression with different NFL-transactivator lines. The
cells of the developing semicircular canals in the auditory complex
also exhibited -galactosidase activity (Fig. 4C) as did
the cells of the developing olfactory epithelia (Fig. 4, D
and E). It is interesting to note that cells in the
olfactory epithelia stained in a non-uniform manner with varying
degrees of intensity (Fig. 4, D and E).
Fig. 4.
Neuronal activity of the NF-L promoter at
later developmental stages (14.5 dpc). Double transgenic embryos
were from crosses either with NFL-TSV207 (A) or NFL-TSV6
(B-E) males and IE-LacZ16 females.
-galactosidase activity was detected in the developing retina and
lens (A and B), the neuroepithelia of the semicircular canal (C), and the olfactory epithelia
(D and E). Cells within the olfactory epithelia
exhibited a nonuniform pattern of -galactosidase activity.
[View Larger Version of this Image (123K GIF file)]
The examination of whole-mount stained embryos at later developmental
time points revealed a general decline in neuron-specific activity from
the 1.7-kb NF-L promoter (Fig. 5). By
13.5 dpc, neuron-specific -galactosidase staining became restricted
to the neopallial cortex, midbrain, retina, and cerebellar primordia (Fig. 5A). The spinal cord was only stained in the most
posterior region, as were the dorsal root ganglia (not shown). The
spinal cord and dorsal root ganglia in anterior regions were
essentially negative (Fig. 5B). By 14.5 dpc, staining within
the developing brain was limited to the cerebellar anlage, neopallial
cortex, olfactory epithelia, and the developing auditory and optic
apparati (Figs. 4 and 5C). Together, these data reveal that
the 1.7-kb NF-L promoter is neuron-specific during early neurogenesis.
The noticeable decrease in neuronal gene expression implies that while the 1.7-kb NF-L promoter contains regulatory elements for initiation of
transcription early in development, other elements residing elsewhere
may be required to maintain NF-L gene expression in neurons at later
stages.
Fig. 5.
Muscle-specific activity of the NF-L promoter
at later developmental stages. Double transgenic embryos were
isolated from crosses between NF-TIF4 males and IE-LacZ16 females at
13.5 dpc (A and B) and at 14.5 dpc
(C). The embryos were photographed with dark field optics.
Histologic cross-sections at a thickness of 10 µm were obtained from
stained and paraffin-embedded embryos from crosses between either
NF-TIF4 (D) or NFL-TSV207 males (E) and IE-LacZ16
females at 14.5 dpc. Staining is weak in the developing spinal cord,
but -galactosidase activity is present in the developing intercostal
muscles (D) and the extensor muscles of the developing forelimb (E). R, cartilage primordium of the
ribs; H, cartilage primordium of the humerus; U,
cartilage primordium of the ulna.
[View Larger Version of this Image (118K GIF file)]
Muscle-specific Activity of the NF-L Promoter at Later
Developmental Stages
Surprisingly, at later developmental stages,
strong -galactosidase staining was observed in non-neuronal cells.
At 13.5 dpc, the premuscle masses of the fore and hind limbs as well as
skeletal muscle precursors were labeled (Fig. 5A). Thus,
from 13.5 dpc on, the NF-L-promoter was active in myogenic cells in
addition to specific neuron subsets. One day later, at 14.5 dpc,
intense staining for -galactosidase was observed in the developing
abdominal and limb musculature, intercostal muscles, and some facial
muscles (Fig. 5C). The examination of histologic sections
from these embryos confirmed the identity of the lacZ
positive cells as myogenic cells (Fig. 5, D and
E). Staining within the extrinsic ocular muscle is presented
in Fig. 4B where both neuronal (lens and optic nerve) and
myogenic cells exhibited -galactosidase activity. In addition, cells
of the developing intercostal muscles also displayed strong
-galactosidase activity (Fig. 5D). Using a second, independent NF-L-transactivator line, NFL-TSV207, the staining pattern
was similar to that observed with the NF-TIF4 line (not shown). Fig.
5E shows -galactosidase activity within the extensor muscles of the developing fore limb surrounding the cartilage primordia
of the humerus and the ulna from the NFL-TSV207 line.
Embryos examined at 16.5 and 18.5 dpc exhibited no -galactosidase
activity in either whole-mount specimens or in isolated brain or muscle
tissue (not shown). Furthermore, no -galactosidase activity could be
detected in tissues (neuronal and non-neuronal) isolated from mice at
postnatal day 10 and at 1 and 3 months old (not shown). Taken together,
these data reveal the presence of regulatory elements within the 1.7-kb
NF-L promoter that direct gene expression to myogenic cells at later
developmental time points. However, similar to the transient activity
observed in neurons, NF-L promoter activity in muscle tissue does not
continue through late developmental stages or into adulthood. Thus, the NF-L promoter contains temporally regulated DNA elements that can
initiate but do not maintain transgene expression in different cell
types at various developmental stages.
Detection of Transgene Expression in Neonatal Tissue
The lack
of -galactosidase activity in either late embryos or in tissues
isolated from neonatal mice contradicted an earlier report that the
NF-TIF4 transactivator line could transactivate an IE-CAT
transresponder transgene in the brains of neonatal mice (25). To
resolve this discrepancy, we employed sensitive reverse transcriptase-PCR (RT-PCR) methodologies to analyze the expression of
the NF-L-transactivator and the IE-LacZ transgenes in neonates at day
10. Mice with the following genotypes were analyzed: animals carrying
both the NF-TIF4 and IE-LacZ16 transgenes or the NFL-TSV207 and
IE-LacZ16 transgenes, and control animals harboring only the NF-TIF4 or
the IE-LacZ16 transgene. As predicted, the expression of
VP16 was only detected in animals that carried a
transactivator transgene, either NF-TIF4 or NFL-TSV207 (Fig.
6A). VP16 could be detected in
brain, spinal cord, and muscle tissue in the NF-TIF4 line with the
addition of skin in the NFL-TSV207 line. Primers specific for the
lacZ transgene detected lacZ expression only in
mice who received a copy of both the IE-LacZ transgene and an
NF-L-transactivator transgene (Fig. 6A). No lacZ
expression could be detected in animals that contained the IE-LacZ16
transgene alone, confirming that the IE promoter is silent in the
absence of VP16 (Fig. 6A). With two different
NF-L-transactivators, lacZ transcripts were consistently
present in the brains of double transgenic animals (Fig.
6A). In spinal cord samples, lacZ transcript was
detected in 4 of 6 experiments, and no lacZ transcript was ever detected in postnatal muscle or skin tissue. Although
lacZ expression was detected at the RNA level in the brains
from both double transgenic lines that we examined, the level of
protein expression was insufficient to produce detectable
-galactosidase activity. In summary, these results confirm the
specificity of our binary transgenic mouse system in that
transactivation of the lacZ gene occurred only in animals
that harbored both a transactivator and transresponder transgene. In
addition, lacZ expression coincided with VP16
expression in tissues where the NF-L promoter is active. The weak
-galactosidase activity in neonatal tissues may reflect the decrease
in transcriptional activity of the NF-L promoter.
Fig. 6.
Detection of gene expression in 10-day old
transgenic mice by RT-PCR. The detection of -actin
was used as a control to ensure that cDNA was present in every
tissue. The primers used and RT-PCR conditions are described under
"Experimental Procedures." A, detection of transgene
expression. Four different transgenic genotypes were analyzed: NF-TIF4
only, IE-LacZ16 only, NF-TIF4 and IE-LacZ16 double transgenic, and
NFL-TSV207 and IE-LacZ16 double transgenic. Panels for each gene are
aligned in columns by transgenic genotype. Both VP16 and
lacZ gene expression patterns were characterized.
B, detection of endogenous NF-L gene expression. NF-L transcript could be detected both in neuronal and
muscle tissue. B, brain; Sc, spinal cord;
M, skeletal muscle from the femur; Sk, skin;
L, liver; Sp, spleen; K, kidney;
H, heart.
[View Larger Version of this Image (41K GIF file)]
Transcriptional Activity of the Endogenous NF-L Gene Locus
To
compare the transcriptional activity of the transgenic NF-L promoter to
that of the endogenous gene, we analyzed the expression of the
endogenous NF-L gene locus in multiple tissues. Eight
tissues from 10-day old neonatal mice were analyzed by RT-PCR using
primers that flanked a region encompassing the first two introns of the NF-L gene (see "Experimental Procedures"). As expected,
expression from the endogenous NF-L locus was readily
detectable in the brain and spinal cord samples (Fig. 6B,
lanes B and Sc). In addition, we consistently
detected NF-L expression in skeletal muscle tissue (Fig.
6B, lane M). No signal was found for skin, liver,
spleen, kidney, or heart (Fig. 6B). The detection of NF-L
transcript in muscle tissue coincides with that observed for VP16
expression from our NFL-transactivator transgenes (Fig. 6, A
and B). The detection of endogenous NF-L mRNA
in muscle tissue supports our observation of NF-L promoter activity, as
visualized by -galactosidase activity and confirmed by RT-PCR
analyses, in myogenic cells in our transgenic animals (Figs. 4 and 5).
Together, these results show that the endogenous NF-L gene
is transcriptionally active in skeletal muscle tissue. In addition,
they demonstrate that the transcriptional activity of the endogenous
NF-L gene locus is consistent with the activity of the
transgenic 1.7-kb NF-L promoter.
Structure of the Murine NF-L Promoter
To identify
putative DNA regulatory elements that control NF-L gene expression, we
determined the primary structure of the NF-L promoter. We sequenced
1328 bp of the promoter, 1095 bp of which were novel. From bases 513
to 279, our sequence is identical to and confirms the previously
published data (13). Data base searches revealed a strong similarity of
the mouse NF-L promoter to the NF-L promoters from both the rat (34)
and human (10).
The promoter contains several repeated elements (Fig.
7): repeats of TAAAGGTTTTA at 1271 and
708, both of which are conserved in the rat and mouse promoter;
repeats of ATCCTCCCCTT at 114 and +17, both of which are conserved in
the human, rat, and mouse sequence; and, an indirect repeat of
AGTGGGGTGGGGTGA at 404, which is present in both rodent promoters. In
addition, a dinucleotide repeat of (TC)27 is present at
1031. Many putative DNA regulatory sites reside within the 1.7-kb
promoter. The conservation of these potential regulatory sites among
the mouse, rat, and human NF-L promoters is indicated in Fig. 7.
Sequences proximal to the transcription initiation site and the TATA
box, at base 31 (13), contain potential binding sites for general
transcription factors such as AP2, Sp1, and ATF/CREB (35) (Fig. 7). In
the distal region of the promoter, there are a number of putative
binding sites for tissue-specific and developmentally regulated
transcription factors together with additional putative sites for AP2
and Sp1. Similarities to regulatory sequences found in other
neuron-specific genes include: an OL-1 binding site, which had been
implicated in lens-specific gene expression (36); five PEA-3 sites
(37); and a zif268/egr-1/krox24 site (35). Four potential binding sites
for the embryonically expressed POU-domain transcription factor Pit-1
(38) are located within the distal promoter region. Of particular
interest is the presence of putative binding sites for several myogenic
and basic-helix-loop-helix (bHLH) transcription factors including two
MyoD/E box sites at 1186 and 928 (39), which are conserved in the
human, rat, and mouse NF-L promoters. Also conserved in the rat and
mouse promoters are an MLC1f/3f site at 515 (40), an MCBF site (with
one mismatch) at 509 (41), an E box at 1283 (35), and a potential
myocyte enhancer factor 2 (MEF2) binding site (42) overlapping the TATA
box of the NF-L promoter at position 32 with 9 of 10 bases identical to the consensus (Fig. 7). The conservation of these sites within the
three species suggests that they may play a role in the normal expression of the NF-L gene. The presence of putative
myogenic transcription factor binding sites may explain the expression of the lacZ transgene in developing and neonatal myogenic
tissue (Figs. 5 and 6B).
Fig. 7.
Sequence analysis of the murine NF-L
promoter. Numbering begins with the transcription initiation site
as +1. Upper case letters refer to nucleotides sequenced in this study
while lower case letters refer to the published partial sequence of the
mouse NF-L promoter (13). Repeated elements and potential binding sites
for various transcription factors are indicated. Sequences unique to
the mouse NF-L promoter are underlined; those identical in
mouse and rat NF-L promoters are boxed; and those identical
in mouse, rat, and human NF-L are shaded.
[View Larger Version of this Image (69K GIF file)]
Deletions within the NF-L Promoter Identify Muscle-specific
Regulatory Elements
To identify genetic regulatory elements that
contribute to the observed muscle-specific expression pattern at 13.5 dpc, a series of deletions in the NF-L promoter were generated. The
first deletion truncated the promoter at base 1215, eliminating the putative Sp1 binding site at 1490 and an E-box at 1283. Still, this
construct was able to direct transgene expression in both neuronal and
myogenic tissues with intense -galactosidase activity in the brain
and spinal cord as well as in facial, limb, and trunk musculature (Fig.
8A). Deleting further to base
941 removes potential AP-2, PEA-3, and OL-1 binding sites as well as
the dinucleotide CT repeat at 1031 and the putative MyoD binding site
at 1186. This fragment was capable of activating the
lacZ transresponder gene in both neurons and
muscles (Fig. 8B). However, deletion to base 524 removes a
putative MyoD binding site at 928 and was unable to produce transgene
expression in muscle tissue (Fig. 8C). Weak neuronal
staining was still observed in the retina, cerebellar anlage, the most
posterior aspects of the spinal cord (Fig. 8, C and
E), and otic apparatus (not shown). Upon examination of
histologic cross-sections through these embryos, no -galactosidase staining was observed in muscle tissue (Fig. 8F). These
experiments indicate that a muscle-specific enhancer resides between
941 and 524 of the NF-L promoter and suggest that the putative MyoD binding site at 928 may confer the muscle-specific promoter activity. This site is conserved in both the rat and human NF-L promoters. In
addition, the dramatic decrease in neuronal staining demonstrates that
this region of the promoter (between bases 941 and 524) also
contains elements important for its level of activity or efficiency in
neurons. It is interesting to note that within this fragment, the 90-bp
between bases 777 and 688 comprise a region that is 90% identical
to the rat NF-L promoter (34) and 68% identical to the that of the
human (10). Although the sequence does not contain any known
transcription factor binding sites, its high degree of conservation is
suggestive of a regulatory function. Deleting further to base 328,
which removes all putative myogenic transcription factor binding sites,
resulted in only weak neuronal staining where -galactosidase
activity was restricted to the retina (Fig. 8D) and
olfactory epithelia (not shown). These deletion analyses identify
distinct functional roles between the proximal and distal promoter
regions. Although the proximal promoter was able to direct gene
expression in certain neuronal subsets (Fig. 8, C and
D), it clearly was unable to recapitulate the full pattern
of neuronal activity when compared with either the full 1.7-kb promoter
(Fig. 5A) or with deletion fragments containing more distal
promoter elements (Fig. 8, A and B). The distal
region of the promoter, between bases 941 and 524, thus contains
regulatory elements necessary for both the specificity and intensity of
neuronal activity. The muscle-specific activity of the promoter was
lost when only proximal promoter fragments were used (Fig. 8,
C and D). Critical muscle-specific regulatory
elements therefore reside in the distal promoter region, between 941
and 524, or cooperate with more proximal downstream enhancers. These
data identify relevant tissue-specific regulatory elements in the
distal promoter region of the mouse NF-L promoter. Furthermore, this
deletion analysis shows that the regulatory element conferring
muscle-specific activity is physically separable from the elements
responsible for neuronal activity.
Fig. 8.
Deletions within the NF-L promoter identify a
potential myogenic regulatory region. Double transgenic founder
embryos were generated using DNA fragments harboring different
deletions within the NF-L promoter and isolated at 13.5 dpc. Both
neuron- and muscle-specific promoter activity was detected with a
deletion to base 1215 (A) or to base 941 (B).
Weak staining was detected in neuronal subsets upon further deletion to
base 524 (C) or to 328 (D). Histologic
cross-sections through the embryo in panel C identify
-galactosidase activity in neuronal cells including the lens and the
retina (E); however, no -galactosidase activity is
detected in developing muscle tissue (F). S,
scapula; Su, subscapularis muscle; T, trapezius
muscle.
[View Larger Version of this Image (89K GIF file)]
DISCUSSION
With this study, we have characterized the activity of the 1.7-kb
murine NF-L promoter during embryonic development using a unique binary
transgenic mouse system. This system uses the potent viral
transcriptional transactivator, VP16. The VP16 gene is expressed under
the control of the 1.7-kb murine NF-L promoter and is used to
transactivate a lacZ reporter gene, the transresponder transgene, which is linked to the VP16-responsive IE promoter (25, 29).
We generated several NFL-transactivator transgenic mouse lines to
characterize the embryonic expression pattern of the mouse NF-L
promoter by virtue of -galactosidase activity resulting from
transactivation of an IE-LacZ transresponder transgene. Embryos that
inherited both a transactivator and transresponder transgene
demonstrated specific lacZ expression within the developing nervous system. Staining patterns were faithfully reproduced with six
independent NFL-transactivator mouse lines in addition to the
previously established NF-TIF4 transactivator line.
The developmental activity of the promoter was characterized by
staining for lacZ gene expression at different developmental time points. -galactosidase activity was initially found to be specific for cells of the developing nervous system and could be
detected at 8.5 dpc in neuroepithelial cells. The first appearance of
NF-L protein has been detected by immunohistochemistry in the hindbrain
between 9.0-9.5 dpc and at 10.5 dpc in the spinal cord (2). The
detection of lacZ expression before NF-L protein synthesis is consistent with the onset of promoter activity prior to or concomitant with the terminal cell division of neuronal precursors. Differentiated neurons, such as the ventrally located motor neurons, however, did not stain for -galactosidase at later developmental stages, suggesting that the NF-L promoter does not maintain its activity in mature neurons. By 14.5 dpc, neuronal NF-L promoter activity was restricted to the developing optic, otic, and olfactory apparati with some weak persistent activity in the fore- and midbrain. Taken together, these data show that the 1.7-kb NF-L promoter initiates
transcription in a neuron-specific fashion at early stages of neuronal
differentiation.
Previous studies using the human NF-L promoter report that either a
307-bp or 2.3-kb fragment of the promoter could direct neuron-specific
gene expression in transgenic embryos at 13.0 dpc (16, 18). However, in
those experiments, there was variability among independently derived
transgenic embryos, suggesting that the promoter fragments used were
relatively weak and could be influenced by the transgene integration
sites. Independently derived transgenic founder embryos exhibited
varying patterns of neuronal expression. The failure to identify a
strong neuron-specific enhancer element in the promoter regions of the
NF genes has led to the proposition that intragenic regions of the NF-L
gene are necessary for accurate nervous system expression in transgenic
mice (11, 16, 18). Our own preliminary results in transgenic embryos indicate the possible presence of additional neuron-specific regulatory elements in the second intron of the mouse NF-L gene.2
Collectively, our data document a consistent pattern of NF-L promoter
activity in transgenic mice. Multiple independent transactivator transgenic lines that could transactivate the IE-LacZ transgene gave a
similar pattern of -galactosidase activity. Thus, we conclude that
the 1.7-kb promoter directs reporter gene expression restricted to the
developing nervous system in a reproducible fashion. Several explanations may account for the differences to results reported in the
literature. First, our incubation time for the -galactosidase staining reaction was limited to 2 h. This would select only those transgenic lines that exhibit the strongest expression. Second, the
murine NF-L promoter, although very similar to that from human and rat,
might contain additional regulatory elements that could affect gene
expression. Third, we employed 1.7 kb of promoter sequence while other
studies either used much larger or minimal promoter sequences. The
presence or absence of additional regulatory elements could alter the
expression pattern from the promoter. Fourth, we employed a
transcriptional transactivator, VP16, to activate the reporter gene in
a binary transgenic mouse system. VP16 interacts with cellular
transcription factors (43-48), and it is therefore possible that VP16
potentiates reporter gene expression. The conclusion from our results
is that the 1.7-kb upstream fragment of the mouse NF-L promoter is
developmentally active specifically in the nervous system during early
neurogenesis.
The developmental activity of the NF-L promoter was monitored through
neonatal time points. Previously, the NF-TIF4 line was shown to be
capable of transactivating an IE-CAT transresponder transgene in the
brain of neonatal mice (25). However, using an IE-LacZ transresponder
transgene, -galactosidase activity could not be detected in nervous
tissue at developmental stages later than 15.5 dpc or at three
different postnatal time points. RT-PCR documented the presence of
VP16 transcripts in 10-day old postnatal brain, spinal cord,
and muscle tissues. lacZ transcripts were also consistently
detected in the brain with weaker signals for the spinal cord of double
transgenic neonates. These results suggest that the 1.7-kb NF-L
promoter is weak at this time point or that only a few cells may be
expressing the transgene; in either case, the LacZ protein expression
was too low to be detected using the X-gal staining assay. In
combination with the staining data from earlier embryonic stages, our
results indicate that the 1.7-kb NF-L promoter contains elements for
initiating but not maintaining gene expression within neurons.
Surprisingly, NF-L promoter activity was also detected in developing
muscle tissue as visualized by strong -galactosidase staining of
13.5- and 14.5-dpc embryos. These results demonstrate that the NF-L
promoter is active in non-neuronal cell types in vivo,
namely in developing muscle cells. Although the promoter was
transcriptionally active in these cells, the expression of NF-L protein
could not be detected by immunohistochemistry in non-neuronal tissues
at 9.5, 12.5, 14.5, 16.5, and 18.5 dpc in the mouse (2).2
This is consistent with data from cell transfection experiments that
detected NF transcripts but not protein upon introduction of NF genes
into non-neuronal cell types (7, 13, 19-22). Our data suggest that
post-transcriptional mechanisms regulate the tissue-specific expression
of NF proteins; however, they also reveal that muscle-specific
regulatory elements appear to be present within the NF genes.
Non-neuronal expression from NF-promoters has been previously reported
in vivo in transgenic mice. A 5-kb promoter fragment from
the rat NF-L gene could direct expression of a CAT reporter gene in
adult nervous and skeletal muscle tissue (14), and transgene-derived
neurofilaments have been observed in skeletal muscle by electron
microscopy (27, 49). It is also interesting to note that, in rabbit,
NF-M mRNA has been isolated from precursors of heart conduction
myocytes.3 We now show that
elements regulating NF expression in muscle tissue reside within the
1.7-kb NF-L promoter.
The transcriptional activity of the endogenous NF-L gene
locus was assayed by RT-PCR and was detected in brain, spinal cord, and
skeletal muscle tissue from every experimental animal examined. Here we
show that in vivo, the endogenous NF-L locus is
transcriptionally active in non-neuronal cells, specifically in muscle
tissue. NF-L transcripts were not detected in any other
tissue studied. These results are consistent with our finding that the
NF-L promoter is active in muscle cells during late embryogenesis. The
transient presence of -galactosidase activity in myogenic cells at
14.5 dpc but not later stages of development suggests that, as in
neurons, the 1.7-kb NF-L promoter is only capable of initiating but not maintaining tissue-specific gene expression. These data imply that
molecular cues for non-neuronal NF gene expression exist within the
1.7-kb NF-L promoter and that post-transcriptional mechanisms may
restrict the expression of NF proteins to neurons.
To identify potential regulatory elements involved in NF-L gene
expression, we sequenced 1095 bp of novel sequence from the murine NF-L
promoter. The overall sequence similarity was very high between the
mouse and rat NF-L promoters, and many domains were highly conserved
with the human NF-L promoter (Fig. 7). Sites with similarities to known
transcription factor binding sites appear to be clustered into two
domains: the proximal promoter region, from 328 to +105; and the
region distal to the transcription start site, from 1608 to 329.
Notable in the proximal promoter is the presence of two putative PEA-3
binding sites (37), one zif268/egr-1/krox24 site (10, 13, 35) and three
potential AP2 sites (35). These factors have recently been shown to
bind, in combination, to the promoter of the neuron-specific human
synapsin II gene (50). PEA-3 mRNA expression has been detected in
the brain and epididymis in adult mice (51) and in subsets of spinal motor neurons in the
chicken.4 Thus, it is
possible that these sites are involved in regulating NF-L
gene expression in the nervous system. However, our own promoter deletion studies demonstrated that the proximal promoter was able to
direct transgene expression only in certain neuronal subsets (Fig.
8D) and confirmed that additional, distal promoter regions are required for the neuronal activity of the NF-L promoter.
The promoter deletion analyses also confirm that the distal promoter
region contains elements necessary for both the neuron- and/or
muscle-specific activity of the promoter. Several putative binding
sites for myogenic factors of the bHLH class are present in the distal
region: two sites for MyoD binding (39), one site for MLC1f/3f (40),
one site for MCBF (41), and an E box (35). Deletion of the promoter
from 941 to base 524 or 328 resulted exclusively in neuronal
staining (Fig. 8, B-D), implicating the putative
MyoD binding site at 928 as the muscle-specific enhancer. The
remaining neuronal staining was extremely weak and restricted to
certain neuronal subsets. These data demonstrate that the promoter region between 941 and 328 contains distinct and independent elements for muscle- and neuron-specific gene expression. Furthermore, it appears that the level of enhancer activity in neurons requires the
interaction of elements in the proximal, 328 to +105, region of the
promoter with those further upstream.
It is interesting to note that the temporal pattern of transgene
expression in muscle in our transgenic embryos does not coincide with
the onset of expression of any known myogenic bHLH genes (52). The
Mef2 gene family is both spatially and temporally regulated
in its expression during skeletal muscle development (53, 54) and, as
development progresses, Mef2 gene expression is expanded to
include the brain (55). This progression from muscle to nervous tissue
has been taken as an example of accumulating evidence for parallel
transcriptional mechanisms in neuron- and muscle-specific gene
expression. The 1.7-kb NF-L promoter constitutes another example of a
regulatory element in muscle and neurons with a temporally regulated
switch in tissue specificity. However, in this situation, expression
shifts from neurons to muscle cells. Taken together, these data support
the notion that temporally separable enhancers are present in these
promoters that control specific gene expression in distinct tissues
during embryonic development.
In summary, our study demonstrates that a region 1.7 kb upstream of the
murine NF-L promoter reproducibly directs nervous system-specific gene
expression during embryogenesis in transgenic mice. Characterization of
the developmental activity of this promoter revealed intricate spatial
and temporal regulation that accompanies a switch to muscle-specific
gene expression during later developmental stages. Deletion analyses
indicate that distinct elements within the distal promoter region
regulate the neuron- and muscle-specific promoter activity. The
transient nature of promoter activity in both neuronal and muscle cells
suggests that initiation of transcription from the NF-L promoter is
possibly linked to cell division or differentiation state and indicates
that additional regulatory elements may be required to maintain NF-L
transcription in terminally differentiated cells.
FOOTNOTES
*
This work was supported in part by a grant from the Arizona
Disease Control Research Commission (to C. K.) and by the generous support of the Mayo Foundation.The costs of publication of this article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) U80021.
Present address: Dept. of Biochemistry, Midwestern University,
19555 N. 59th Ave., Glendale, AZ 85308.
§
To whom correspondence should be addressed: S. C. Johnson
Medical Research Center, Mayo Clinic Arizona, 13400 E. Shea Blvd., Scottsdale, AZ 85259. Tel.: 602-301-7137; Fax: 602-301-7017; E-mail: ckappen{at}mayo.edu.
1
The abbreviations used are: NF, neurofilament;
NF-L, -M, -H, neurofilament light, medium, and heavy chain,
respectively; RT-PCR, reverse transcriptase-polymerase chain reaction;
dpc, days post-coitum; bp, base pair(s); kb, kilobase(s); PBS,
phosphate-buffered saline; X-gal, 5-bromo-4-chloro-3-indolyl
-D-galactopyranoside; IE, immediate early; bHLH,
basic-helix-loop-helix; CAT, chloramphenicol acetyltransferase.
2
P. Yaworsky and C. Kappen, unpublished
data.
3
M. Vitadello, unpublished data,
GenBankTM accession Z47378.
4
J. Lin, S. Pfaff, and T. Jessell, personal
communication.
ACKNOWLEDGEMENTS
We are grateful to Tanya Thal for expert
technical assistance, M. Anita Jennings for preparation of histologic
sections, and Anne Kristensen for DNA sequencing. Stephanie Munger
provided excellent service in the transgenic mouse facility, and Marvin Ruona helped in the preparation of photographs. We also thank Dr. J. Michael Salbaum for critical discussion.
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