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Volume 272, Number 45, Issue of November 7, 1997
pp. 28550-28556
The Chicken GATA-6 Locus Contains Multiple Control
Regions That Confer Distinct Patterns of Heart Region-specific
Expression in Transgenic Mouse Embryos*
(Received for publication, June 17, 1997, and in revised form, July 30, 1997)
Chao-Zhen
He
and
John B. E.
Burch
From the Institute for Cancer Research, Fox Chase Cancer Center,
Philadelphia, Pennsylvania 19111
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
ABSTRACT
The GATA-6 transcription factor is expressed in
cardiogenic cells and during subsequent stages of heart development in
diverse vertebrate species. To gain insights into the molecular events that govern this heart-restricted expression, we isolated the chicken
GATA-6 gene and used several approaches to screen for associated control regions. Our analysis of two chicken
GATA-6/lacZ constructs in transgenic mouse embryos was
particularly revealing. One GATA-6/lacZ construct, which
has 1.5 kilobase pairs of upstream sequences along with the promoter
and first intron, was expressed exclusively in the atrioventricular
canal region of the heart. This expression pattern is novel and appears
to mark specialized myocardial cells that induce underlying endocardial
cells to initiate valve formation. The other GATA-6/lacZ
construct, which has an additional 7.7 kilobase pairs of upstream
sequences, was expressed in the ventricle and outflow tract in addition
to the atrioventricular canal. The failure of these GATA-6
control regions to function as enhancers in transfected cardiac myocyte
cultures underscores the importance of using transgenic approaches to
elucidate transcriptional controls that function in the developing
heart. Although the endogenous GATA-6 gene is expressed
throughout the heart, our results indicate that this is effected in a
heart region-specific manner.
INTRODUCTION
Although commitment to the cardiogenic lineage and the events that
precede cardiac myocyte differentiation are still poorly understood at
the transcriptional level, major advances have recently been made in
understanding the roles that various growth factors serve in this
context. In particular, members of the transforming growth factor-
family of growth factors have been shown to effect the specification of
precardiac mesoderm, whereas members of the fibroblast growth factor
family of growth factors have been shown to regulate the subsequent
proliferation and differentiation of these committed cells (1, 2). The
genes that are regulated in direct response to these extracellular
signals and the transcription factors that mediate these programming
events within the cardiogenic lineage have not yet been elucidated.
The transcriptional controls that function within terminally
differentiated cardiac myocytes have been analyzed in much greater detail owing to the relative ease of obtaining material for study. Transient transfection and direct muscle injection assays have been
used to map control regions for many cardiac genes (for review, see
Refs. 3 and 4), and some of these control regions have also been shown
to direct heart-restricted expression in transgenic mice. Several of
these control regions derive from genes that are expressed in a heart
region-specific manner, and in general, the respective control regions
have been found to function in a similar manner in transgenic animals.
Examples include the ventricular control region from the mouse
ventricular MLC-2v gene (5) and the atrial control region
from the quail atrial slow MyHC3 gene (6).
Since many cardiac genes are also expressed in skeletal muscle, it is
perhaps not surprising that several of the aforementioned cardiac
control regions were found to contain motifs similar to those found
within skeletal muscle control regions (e.g. CArG, MCAT,
MEF2, and E-box). These control regions do not necessarily direct dual
heart and skeletal muscle expression, however, and the factors that
bind to these motifs are not necessarily the same in both types of
striated muscle. For example, four basic helix-loop-helix factors
(i.e. MyoD, MRF4, Myf-5, and myogenin) are expressed in
skeletal muscle, but not in cardiac muscle (7). Conversely, GATA motifs
are commonly found in cardiac control regions, and three GATA factors
(i.e. GATA-4/5/6) that bind to these sites are expressed in
the heart, but not in skeletal muscle (8-14).
Several additional heart-restricted transcription factors have been
identified by other means. For example, degenerate polymerase chain
reaction and low stringency screens were used to isolate clones for
vertebrate Nkx2.5 factors (15-18) related to the Drosophila tinman homeodomain factor (19). Similar screens were used to isolate
clones for two related basic helix-loop-helix factors, dHAND and eHAND
(20-23), that are expressed in the developing heart. A factor (CMF1)
has been reported to be transiently expressed in the developing
heart (24, 25), and a member of the MEF2 family, MEF2C, has also been
shown to be expressed early in the cardiogenic lineage (26).
It remains to be determined how the genes for these heart-restricted
transcription factors are themselves regulated over the course of heart
development. While members of the transforming growth factor- family
of growth factors have been shown to induce Nkx2.5 and
GATA-4 gene expression in some regions of non-precardiogenic mesoderm, it is not known if these responses are direct or indirect (2). Similarly, although it is known from gene knockout mice that
Nkx2.5 is required to induce eHAND gene expression, this regulation is not understood in molecular terms (15).
In this study, we undertook to screen for control regions associated
with the chicken GATA-6 gene, which is expressed in early cardiogenic mesoderm as well as during subsequent stages of heart development (10, 12, 13). GATA-6 is a zinc finger transcription factor
that, along with the related GATA-4 (27, 28) and GATA-5 factors, has
been implicated in effecting cardiac myocyte differentiation and heart
morphogenesis. Although the endogenous GATA-6 gene is expressed throughout the developing heart, our results unexpectedly reveal that this expression is attributable to several distinct control
regions that function in different regions of the developing heart.
Moreover, one of these control regions directs a unique pattern of
expression in transgenic mouse embryos: in particular, to myocardial
cells of the atrioventricular
(AV)1 canal. Whereas this and
a more distal GATA-6 control region function in transgenic
mouse embryos, neither functions as an enhancer in transfected cardiac
myocyte cultures. These GATA-6 control regions are thus
distinct from previously described cardiac control regions in several
respects.
EXPERIMENTAL PROCEDURES
Isolation and Characterization of Chicken GATA-6 Genomic
Clones
A previously described chicken GATA-6 cDNA probe (12)
was used to isolate three chicken GATA-6 genomic clones from
a chicken genomic phage library. Standard protocols were used to purify and map these clones (29). Restriction fragments that hybridized to
this GATA-6 cDNA probe were cloned into the pBluescript II KS+/ plasmid (Stratagene), and the exonic regions were
sequenced using primers directed against various portions of the GATA-6
cDNA sequence. These sequences, as well as the others described
below, were determined on both strands using Sequenase reagents (U. S.
Biochemical Corp.).
Primer Extension and 5 -RACE
Poly(A)+ mRNA
was isolated using a FastTrack mRNA isolation kit (Invitrogen).
Primer extension reactions were carried out according to a standard
protocol (30) using an antisense primer directed against the
33-57-nucleotide segment of the published chicken GATA-6 cDNA
sequence (12). This primer, which is marked with an arrow in
Fig. 2 (A and C), was annealed at 55 °C to
5-µg aliquots of poly(A)+ mRNA.
Fig. 2.
Mapping the transcriptional start site for
the GATA-6 gene. A, an antisense primer (denoted
by the arrow) that maps to the noncoding portion of the
second exon (E2) was used to program the primer extension and 5 -RACE
reactions shown in B and C, respectively. B, this primer yielded a 118-nucleotide (nt)
cDNA product from stomach and liver (but not brain) mRNA
samples. Note that the ladder does not correspond to the sequence of
the first exon. C, the sequence of the largest 5 -RACE
product (obtained using embryonic (day 6) mRNA as template) is in
accord with the results of the primer extension analysis shown
B. Note that the sequences above and below the dashed
line represent sequences from the first and second exons (E1 and
E2), respectively. The transcriptional start site (at position +1) and
the BamHI site (at position +19) are in boldface
(see also Fig. 1C).
[View Larger Version of this Image (34K GIF file)]
5 -RACE reactions were performed using a 5 -AmpliFINDER kit
(CLONTECH) and the primer described in the previous
paragraph. The resultant polymerase chain reaction products were cloned
directly into the pCRII vector with a TA cloning kit (Invitrogen) and
sequenced using SP6 and T7 primers.
Reporter Constructs
The promoterless p/CAT plasmid was made
by deleting the BglII-HindIII (simple TATA box)
fragment from the pTATA/CAT plasmid (31) and replacing this with an
XbaI (linker) site. Four restriction fragments that include
the GATA-6 promoter were cloned (with XbaI linkers) into the newly engineered XbaI site of p/CAT to
yield the pGATA-6/CAT plasmids shown in lines
1-4 of Fig. 3A. An antisense primer from the CAT gene
was used as a sequencing primer to confirm that these fragments were
oriented correctly so as to allow them to function as promoters for the
downstream CAT gene.
Fig. 3.
The GATA-6 promoter displays a
limited degree of cell type specificity in transient expression
assays. Four fragments that span the transcriptional start site
for the GATA-6 gene (A) were assayed for their
abilities to direct CAT reporter gene expression in four different cell
types (B). The promoterless (parental) p/CAT plasmid
(line 5) and an SV40-driven CAT plasmid (line 6) were also assayed in parallel. The CAT data from triplicate
transfection assays were normalized relative to an SV40-driven
-galactosidase plasmid that was included as an internal control in
each case. fibro., fibroblasts.
[View Larger Version of this Image (25K GIF file)]
A NotI site was inserted into the distal end of the
polylinker of the promoterless lacZ vector pPD46.21 (32) by
replacing the HindIII-PstI fragment with a
synthetic HindIII-PstI fragment that has a
NotI site introduced between the SphI and
PstI sites. (This modified vector (pPD46.21.NotI)
also has a NotI site downstream of the lacZ gene;
thus, derivative test fragments (for transgenic assays; see below) were
released by simply digesting with NotI.) The derivative
GATA-6/lacZ plasmids shown in Fig. 5 were made using
stepwise approaches. First, the +19/+807
BamHI-SmaI fragment that spans the first intron
and includes parts of the first and second exons of the
GATA-6 gene was cloned into the polylinker of
pPD46.21.NotI. Second, the 1467/+19
SacI-BamHI fragment was inserted (as a
BamHI fragment with linkers) into the BamHI site to yield p( 1.5/+0.8)GATA-6/lacZ (see line 1 of
Fig. 5). The plasmids depicted in lines 5-8 of Fig. 5 were
made by inserting distal fragments into the PstI polylinker
site in p( 1.5/+0.8)GATA-6/lacZ. Similarly, the plasmids
shown on lines 4 and 9-12 of Fig. 5 were made by
cloning fragments into the XbaI polylinker site of
p( 1.5/+0.8)GATA-6/lacZ (using XbaI linkers as
needed). The plasmid p( 3.0/+0.8)GATA-6/lacZ (see
line 2 of Fig. 5) was made by cloning the 3.0 kb/+19 bp BamHI fragment into the BamHI site of the
pGATA-6/lacZ plasmid that contains the +19/+807
BamHI-SmaI fragment (described above). Last, the
plasmid p( 4.1/+1.0)GATA-6/lacZ (see line 3 of
Fig. 5) was made by cloning the 4.1/+1.0
NcoI-NotI fragment (with XbaI linkers)
into the XbaI site of the pPD46.21.NotI
vector.
Fig. 5.
Distal sequences from the GATA-6
gene region fail to enhance the GATA-6 promoter in
transient expression assays. Overlapping fragments from the
9.2/ 1.5 GATA-6 gene region were cloned upstream of the
GATA-6 promoter in the p( 1.5/+0.8)GATA-6/lacZ
plasmid to yield the plasmids depicted in lines 2-12.
Transfection assays of primary cultures of cardiac myocytes revealed
that the 3.0/ 1.5 sequence had a modest negative effect on
GATA-6 promoter activity (compare lines 2-4 with
line 1). -gal, -galactosidase.
[View Larger Version of this Image (26K GIF file)]
Cell Culture and Transient Transfection
Primary cultures of
cardiac fibroblasts and cardiac myocytes were prepared using a slight
modification of an established protocol (33, 34). Briefly, ventricles
were dissected from embryonic day 7 chick hearts and serially digested
at 37 °C with fresh aliquots of 0.05% trypsin in calcium- and
magnesium-free saline. After each 5-min digestion cycle, the sample was
vortexed gently, hearts were allowed to settle, and the supernatant was
collected. The supernatants from the first two cycles contained mostly
cardiac fibroblasts; these cells were collected into fibroblast growth medium (M199 medium, 10% fetal bovine serum (FBS), 10% tryptose phosphate, and 1% penicillin/streptomycin/kanamycin (PSK) antibiotics) and then passed through a 75-mm nylon cell strainer, centrifuged, and
resuspended in the same medium. These cells were passaged three to four
times (in T75 flasks; splitting 1:3 each time) in the same medium
before being used for transfection assays (see below). The supernatants
from the next five cycles contained mostly cardiac myocytes; after
inactivating the trypsin (with M199 medium, 5% heat-inactivated FBS,
and 1% PSK), the cells were passed through a 75-mm nylon cell
strainer, centrifuged, and resuspended in M199 medium and 1% PSK.
Cardiac myocytes preferentially attached to six-well culture plates
within 3 h; these adherent cells were maintained in M199 medium
and 1% PSK for 12-18 h before being used for transfection assays (see
below). These cardiac myocytes displayed spontaneous contractile
activity in culture.
COS-7 cells, which were obtained from American Type Culture Collection,
were grown in Dulbecco's modified Eagle's medium, 10% FBS, and 1%
PSK. Chicken LMH hepatoma cells (35) were grown in Waymouth's medium,
10% FBS, and 1% PSK as originally described.
Transient transfections were performed using LipofectAMINE reagent
(Life Technologies, Inc.). Experiments were processed according to the
manufacturer's instructions. The following volumes of LipofectAMINE per number of cells were found to be optimal for transfection assays
and hence were used for the experiments described in this report:
cardiac myocytes, 4.5 µl/1 × 106 cells; cardiac
fibroblasts, 4.0 µl/5 × 105 cells; LMH cells, 5.5 µl/4 × 105 cells; and COS-7 cells, 4.0 µl/3 × 105 cells. The molar amounts of reporter plasmids were
held constant for each experiment; differences in the weight amounts of
DNA were adjusted (to a total of 2.0 µg) with a generic plasmid
(pBluescript II KS+/ ). When CAT test plasmids were used,
0.3 µg of pSV- -galactosidase (Promega) was used as an internal
control. When lacZ test plasmids were used, 0.2 µg of
pGL3-control (Promega) served as the internal control. Cells were
exposed to the transfection mixture for 6 h. For cardiac
fibroblasts, LMH cells, and COS-7 cells, the respective growth media
(described above) were switched at this time. Cardiac myocytes were
initially switched to M199 medium plus 2% heat-inactivated FBS and 1%
PSK and were subsequently (12 h later) switched to M199 medium plus 1%
PSK.
Transfected cells were harvested and lysed with reporter lysis buffer
(Promega) after 48 h. Aliquots (2-10 µl) of cell extracts were
assayed for luciferase activity in a Monolight 2010 luminometer (Analytical Luminescence Laboratory) using a Promega luciferase assay
system kit. Aliquots (20-50 µl) of cell extracts were assayed for
-galactosidase activity in 96-well plates using a -galactosidase enzyme assay system kit (Promega); data were quantified at 420 nm with
a Rainbow Reader (SLT Labinstruments). For CAT test constructs, after
-galactosidase assay, the rest of each extract was heated for 10 min
at 65 °C; CAT activities for these samples were assayed with
14C using a standard chromatographic method. The CAT
activity was measured within the linear range in each case.
Hypersensitive Site Analysis
DNase I hypersensitive (HS)
sites were identified over the GATA-6 gene region using an
established protocol (36). Chick heart and brain nuclei were prepared
from day 12 embryos and digested with 0.1-1.0 µg/µl DNase I for 10 min at 37 °C. The DNA samples were isolated, digested with
KpnI or HindIII and EcoRI,
Southern-blotted, and probed with a random primer-labeled 3.0/ 2.7
HindIII-KpnI fragment.
Production and Analysis of Transgenic Mouse Embryos
The
p( 9.2/+0.8)GATA-6/lacZ plasmid and the
p( 1.5/+0.8)GATA-6/lacZ plasmid (see lines 4 and
1 of Fig. 5) were derived from the promoterless
lacZ vector pPD46.21.NotI as described above. These GATA-6/lacZ inserts were isolated free of plasmid
sequences by NotI digestion followed by preparative agarose
gel electrophoresis. The inserts were purified using a QIAquick gel
extraction kit (QIAGEN Inc.); serially extracted with phenol (three
times), phenol/chloroform, and chloroform; and then precipitated with
ethanol. The inserts were resuspended in phosphate-buffered saline and
microinjected into the pronuclei of fertilized oocytes from the inbred
strain FVB/N. Eggs that survived injection were transferred into the oviducts of pseudopregnant females of strain ICR. Embryos were isolated
at approximately day 11 and then fixed and stained for -galactosidase activity (37). Transgenic embryos were photographed intact as well as after being embedded and sagittal-sectioned (38).
RESULTS
Isolation and Characterization of the Chicken GATA-6 Gene
We
previously isolated a chicken GATA-6 cDNA clone (12), and in the
present study, we used this probe to isolate three overlapping chicken
GATA-6 genomic clones. An analysis of these genomic clones revealed five GATA-6 coding exons (denoted E2-E6) (Fig.
1A) that are each flanked by
consensus splice sites (Fig. 1B). Based on the results of a
polymerase chain reaction analysis of genomic DNA (data not shown), we
infer that the remainder of the GATA-6 open reading frame (which was
not included in any of our genomic clones) is encoded by a single exon
(denoted E7) (Fig. 1A).
Fig. 1.
Structural organization of the chicken
GATA-6 gene. A, the GATA-6 gene has a
noncoding first exon (E1) and six coding exons (E2-E7) as indicated.
B, the first six exons are flanked by consensus splice
sites. (The E7 splice acceptor site was not analyzed since our genomic
clones did not include this exon.) C, shown is the sequence
of the 142-bp SacII-BamHI fragment that spans the
core GATA-6 promoter (see line 4 in Fig.
3A). The transcriptional start site (defined as position +1)
was deduced from the results presented in Fig. 2.
[View Larger Version of this Image (25K GIF file)]
The 5 -end of the chicken GATA-6 gene was mapped using
primer extension and 5 -RACE assays. The GATA-6-specific
antisense primer for these assays was directed against a unique
sequence from what proved to be the second exon (E2) of this gene (Fig. 2, A and C). This
primer yielded a 118-nucleotide cDNA product from stomach and liver
(but not brain) mRNAs (Fig. 2B), in qualitative accord
with our previous Northern blot analysis, which revealed that the
GATA-6 gene is expressed in the heart and various tissues that derive from gut endoderm (12). This primer yielded a 5 -RACE cDNA product of the same size (Fig. 2C). A comparison of
this 5 -RACE cDNA product and the corresponding genomic sequence
revealed that the GATA-6 gene has a 43-bp noncoding first
exon (E1) located ~0.6 kb upstream of E2. The intron between E1 and
E2 is flanked by consensus splice sites as expected (Fig.
1B).
The structure of the GATA-6 gene (Fig. 1A) is
very similar to that of the recently reported GATA-5 gene
(39). However, whereas the GATA-5 gene has two alternative
noncoding first exons, the GATA-6 gene appears to have a
unique noncoding first exon.
The Core GATA-6 Promoter Displays a Limited Degree of Cell Type
Specificity in Transient Expression Assays
The 123/+19
SacII-BamHI region of the chicken
GATA-6 gene (Fig. 1C) has several features that
are typical of a promoter. For example, 1) the transcriptional start
site (position +1) maps to a purine embedded within a pyrimidine-rich
tract; 2) an AT-rich motif (albeit not a consensus TATA box) maps to
the 30/ 20 region; and 3) consensus binding sites for several
transcription factors can be found upstream of 30, although we do not
yet know which of these sites are significant.
To confirm that the 123/+19 region of the GATA-6 gene can
function as a promoter and to begin to evaluate whether additional regulatory sequences might reside farther upstream of the promoter or
in the first intron, four overlapping GATA-6 genomic
fragments (Fig. 3A,
lines 1-4) were cloned into the promoterless p/CAT plasmid and assayed for their ability to direct transient expression in four
different cell types. Three of these cell types (cardiac myocytes,
cardiac fibroblasts, and LMH hepatoma cells) express the endogenous
GATA-6 gene (data not shown), whereas the fourth cell type
(COS-7 cells) does not express any endogenous GATA genes (13). The pSV- -galactosidase plasmid was cotransfected as an internal control for each triplicate assay.
The results of these transfection assays are summarized in Fig.
3B. As expected, the p/CAT (promoterless) plasmid directed little or no transient expression, whereas the pCAT control plasmid directed high levels of expression in each cell type (compare lines 5 and 6). The core 123/+19
GATA-6 promoter functioned in cardiac myocytes, and although
less active in cardiac fibroblasts and LMH cells, these signals were
clearly above the background levels of the promoterless p/CAT plasmid
(compare lines 4 and 5). In COS-7 cells, the
GATA-6 promoter plasmid was only 3-fold more active than the
promoterless p/CAT plasmid.
The addition of progressively more distal sequences as well as intronic
sequences to the core GATA-6 promoter plasmid increased transient expression to various extents in the four cell types assayed
(Fig. 3B, compare lines 1-4). These results
suggest that the core GATA-6 promoter is flanked by several
distinct positive control regions. However, since the effect of any
given nonpromotor fragment was rather modest (particularly in cardiac
myocytes), we did not attempt to resolve the respective control regions
further using this approach.
The GATA-6 Gene Is Flanked by Proximal and Distal HS
Sites
The results of the preceding transient expression assays
suggest that 1) the core GATA-6 promoter preferentially
functions in cardiac myocytes; 2) a positive control region(s) maps
within the first intron; and 3) at least two positive control regions map upstream of the minimal promoter. To begin to evaluate whether these (or more distal) control regions might regulate the endogenous GATA-6 gene in the heart, we exploited the fact that
functional control regions are usually marked at the chromatin level by
DNase I HS sites (40).
The probing strategy that we used to survey the GATA-6 gene
region for HS sites is outlined in Fig.
4A. As indicated by the results shown in Fig. 4C, it is clear that HS sites mark the
promoter and first intron (HS-2 and HS-3, respectively) in the heart,
where the GATA-6 gene is expressed, but not in the brain,
where the GATA-6 gene is silent. These results provide
further support for a transcriptional control region(s) within the
first intron of the GATA-6 gene; however, we cannot rule out
that the activity of this region in transfection assays (Fig.
3B) is effected at a post-transcriptional level. The results
of the HS site analysis presented in Fig. 4B also suggest
that another control region(s) may reside ~6 kb upstream of the gene
since this region is marked by a HS site (HS-1) in the heart, but not
in the brain.
Fig. 4.
The GATA-6 gene region is marked
by proximal and distal HS sites in the heart. DNase I-treated
nuclear DNA samples from day 12 embryonic heart and brain were assayed
on Southern blots after being digested with KpnI
(B) or HindIII and EcoRI (C). Both blots were hybridized to a probe from the
3.0/ 2.7 region to screen for HS sites upstream of the
KpnI site at 2.7 and downstream of the HindIII
site at 3.0 (A). Three heart-restricted HS sites were thus
revealed: HS-1 lies ~6 kb upstream of the gene, HS-2 lies over the
promoter, and HS-3 lies over the first intron. The ascending
triangles over the Southern blots in B and C
indicate that the nuclei were digested with increasing amounts of DNase I.
[View Larger Version of this Image (49K GIF file)]
Transient Expression Assays Fail to Provide Evidence for a
Classical GATA-6 Enhancer
To determine whether the distal and/or
intronic HS sites mark classical enhancers, the respective
GATA-6 genomic fragments were inserted downstream of the CAT
gene in the pCAT promoter plasmid, which contains the SV40 promoter,
and transfected into cardiac myocytes. Neither of these fragments
displayed enhancer activity in this assay (data not shown).
We next addressed whether the GATA-6 gene might be flanked
by distal control regions that function only in combination with the
homologous GATA-6 promoter and/or other proximal control
regions. Overlapping fragments that collectively span the 9.2/ 1.5
region were thus cloned into the parental
p( 1.5/+0.8)GATA-6/lacZ plasmid, which includes several
positive control regions in addition to the core GATA-6
promoter (Fig. 3B), and assayed in transfected cardiac
myocyte cultures. The results of these transient expression assays are
summarized in Fig. 5. Once again, we
found no evidence for a classical enhancer associated with this gene.
On the other hand, these results do suggest that a negative element
lies within the 3.0/ 1.5 region since each of the three
reporter plasmids that harbor this region displays 2-fold lower
expression than the parental plasmid (compare lines 2-4
with line 1). This fragment also reduced expression 2-fold
when assayed in the context of the heterologous pCAT control plasmid
(data not shown).
A 10-kb Fragment That Spans the Chicken GATA-6 Promoter Directs
Heart-restricted Expression in Transgenic Mice
Although transient
expression assays have been used to detect a plethora of
transcriptional control regions, negative results must be interpreted
with caution. In particular, control regions that escape detection in
transfection assays can sometimes be shown to function in transgenic
assays (for example, see Ref. 41). With this in mind, we undertook to
test whether a 10-kb fragment that spans the GATA-6 promoter
and first intron as well as all three of the documented HS sites could
function in transgenic mouse embryos.
Since lacZ reporter plasmids can be assayed in transgenic
mice, the p( 9.2/+0.8)GATA-6/lacZ plasmid that we
previously constructed (Fig. 5, line 4) was well suited for
our purposes. As evidenced by the results shown in Fig.
6, this plasmid directed heart-restricted expression in both of the transgenic mouse embryos we obtained. In one
embryo (panel A), the transgene was expressed only in the heart, whereas in the other embryo (panel E), the transgene
was expressed at a few small sites in addition to the heart. A sagittal section of the former embryo is shown in panel B; a more
detailed view of the heart region is shown in panel C. Note
that intense staining is seen in the myocardial layer of the ventricle
(v) and in the proximal region of the outflow tract
(ot). In contrast, expression of the transgene was more
sporadic in the atrium (a). A parasagittal section through
the same embryo (panel D) shows that the transgene is also
expressed in the myocardial layer of the atrioventricular canal
(av) that lies between the primitive atrium and
ventricle.
Fig. 6.
A 10-kb fragment that spans the chicken
GATA-6 promoter directs heart-restricted expression in
transgenic mouse embryos. A GATA-6 gene fragment (that
extends from the SacI site at 9.2 to the SmaI
site in the second exon) was cloned into a promoterless plasmid to
yield p( 9.2/+0.8)GATA-6/lacZ (see line 4 in
Fig. 5). The transgene expression patterns for two mouse embryos that
harbor this plasmid are shown in A and E. A
sagittal section of the former embryo is shown in B, with
the heart region shown in greater detail in C. A
parasagittal section of this heart is shown in D. The primitive atrium (a), ventricle (v),
atrioventricular canal (av), and outflow tract
(ot) are indicated.
[View Larger Version of this Image (58K GIF file)]
The Chicken GATA-6 Promoter-proximal Region Directs Expression
Exclusively to the Atrioventricular Canal of Transgenic Mice
In
light of the failure of transient expression assays to provide evidence
for a distal control region associated with the GATA-6 gene,
it was of interest to determine if distal sequences contributed to the
heart-restricted expression of the p( 9.2/+0.8)GATA-6/lacZ transgene. The p( 1.5/+0.8)GATA-6/lacZ plasmid (Fig. 5,
line 1) was suited to resolve this issue and was used
accordingly. Remarkably, all three of the resultant transgenic mouse
embryos expressed this truncated transgene in a similar highly
restricted manner (Fig. 7). In
particular, as shown in panels A-C, expression of this
transgene was confined in each case to a small region of the heart
(assayed around embryonic day 11). Sagittal sections of the hearts of
these transgenic embryos (panels D-F) revealed that
expression was restricted in each case to myocardial cells that are
confined to the atrioventricular canal and thus overlie the endocardial
cushion.
Fig. 7.
A 2.3-kb fragment that spans the chicken
GATA-6 promoter directs expression to a discrete segment of
the heart in transgenic mouse embryos. The transgene expression
patterns for three mouse embryos that harbor the
p( 1.5/+0.8)GATA-6/lacZ plasmid (see line 1 in Fig. 5) are shown in A-C, and sagittal sections of the
respective heart regions are shown in D-F. Note that the expression of this transgene is confined to myocardial cells that overlie the endocardial cushion within the atrioventricular
canal.
[View Larger Version of this Image (97K GIF file)]
DISCUSSION
Since avian, amphibian, and mammalian species display similar
tissue-restricted patterns of GATA-6 gene expression, we
anticipated that the chicken GATA-6 gene region might
contain tissue-restricted control regions that are sufficiently well
conserved to function in transgenic mice. Indeed, we obtained evidence
for two such control regions within a 10-kb chicken GATA-6
genomic fragment. However, these two control regions did not function
in two different tissues, as might have been expected considering the
rather complex pattern of endogenous GATA-6 expression, but
rather in two different regions of one organ (heart) that expresses the
endogenous GATA-6 gene.
The chicken GATA-6 distal control region(s) was found to be
required for expression in the ventricle and outflow tract segments of
the heart in transgenic mouse embryos. The expression pattern of the
GATA-6/lacZ transgene that includes this distal control region is similar to the transgenic pattern dictated by the
HF-1 control region from the mouse MLC-2v gene
(5). Since the latter control region contains a critical MEF2 site, one
might also expect to find an MEF2 site within the GATA-6
distal control region. These control regions are distinct in other
respects, however, and may use different means to effect similar
expression patterns. For example, the inactivity of the
GATA-6 control region in transfection assays stands in
contrast to the MLC-2v control region. Also, the
GATA-6 control region is located far upstream of the gene, whereas the HF-1 control region lies within the
MLC-2v promoter.
The chicken GATA-6 proximal control region(s) was found to
direct a unique expression pattern in transgenic mouse embryos. In
particular, the truncated GATA-6/lacZ transgene was only
expressed in myocardial cells that reside within the AV canal. These
cells are known to play a special role in heart development; namely, they induce the underlying endocardial cells to undergo an epithelial to mesenchymal transition (42, 43). This transition serves to
restructure the endocardial cushion and to initiate valve formation. Although several endogenous genes are known to be preferentially expressed in AV myocardial cells (44-46), it is not known how any of
these genes are regulated at the molecular level. We presume that the
GATA-6/lacZ transgene is regulated in response to the same
signal(s) that regulates these endogenous genes. However, since two of
the latter genes (BMP-2 and BMP-4) encode growth factors that can induce the expression of another GATA gene
(GATA-4) earlier in the general cardiogenic program (2), it
is possible that these growth factors function in an autocrine manner
to regulate the GATA-6/lacZ transgene in these specialized
AV myocardial cells. In any event, it should be possible to resolve how
this precise heart region-specific control is achieved at the molecular
level since the relevant control region(s) must lie within a 2.3-kb GATA-6 genomic fragment. This is a topic of great biomedical
relevance since valve abnormalities are a major cause of congenital
birth defects.
Whereas the larger GATA-6 genomic fragment directed robust
expression in the primitive ventricle, this fragment functioned poorly
in the primitive atrium. The ability of the endogenous GATA-6 gene to be expressed throughout the primitive heart
may thus require other control regions that reside outside the 10-kb segment assayed in this study. Alternatively, the poor expression of
this transgene in the atrium may be related to the use of a heterologous (chick/mouse) transgenic assay. The basis for the lack of
transgene expression in other tissues (such as gut) that express the
endogenous GATA-6 gene is similarly ambiguous. Whereas homologous (mouse/mouse) transgenic assays may resolve some of these
uncertainties, there is obviously no guarantee that the relevant
control regions will lie within a fragment of comparable (10 kb) size.
Indeed, a much larger (20 kb) fragment that spans the promoter for the
heart-restricted chicken GATA-5 gene failed to direct
heart-restricted expression in transgenic mouse
embry-os.2 Thus, despite the
fact that the GATA-4/5/6 genes display similar expression
patterns, the spatial arrangements of the respective control regions
may be quite distinct.
In contrast to numerous heart-restricted control regions that have been
reported in the literature (5, 6, 47, 48), the GATA-6 distal
control region(s) does not appear to function in transfection assays.
Several possible explanations can be advanced to account for why this
control region might function in ventricular myocytes of transgenic
mice, but not in transfected ventricular myocytes. For example, the
control region may effect a change in methylation (49) or alter the
organization of a chromatin domain (50). Alternatively, the control
region may only function during a particular stage of development (51).
Future studies will be directed at evaluating these possibilities. The
present results also underscore the question of whether transgenic
assays will be required to find evidence for control regions associated with other heart-restricted transcription factor genes.
We do not know if the GATA-6 proximal control region, which
directs AV canal-specific expression in transgenic mice, can function in transfection assays. This is a difficult issue to address since AV
myocardial cells would have to be isolated in reasonable quantities, and the transcriptional milieu that is unique to these cells would have
to remain stable in culture. Whereas efforts to analyze these specialized myocardial cells have been hampered by the lack of a unique
molecular marker, it may be possible to circumvent this technical
limitation by creating lines of transgenic mice that express markers of
interest under the control of the GATA-6 proximal control
region. This line of investigation is currently in progress.
FOOTNOTES
*
This work was supported by National Institutes of Health
Grants GM35535 and HL55373 (to J. B. E. B.) and CA-06927 (to the Fox
Chase Cancer Center) and by the Commonwealth of Pennsylvania.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
To whom correspondence should be addressed: Inst. for Cancer
Research, Fox Chase Cancer Center, 7701 Burholme Ave., Philadelphia, PA
19111. Tel.: 215-728-3696; Fax: 215-728-3574; E-mail:
jb_burch{at}fccc.edu.
1
The abbreviations used are: AV,
atrioventricular; 5 -RACE, rapid amplification of 5 -cDNA ends;
CAT, chloramphenicol acetyltransferase; kb, kilobase pair(s); bp, base
pair(s); FBS, fetal bovine serum; HS, hypersensitive.
2
C. MacNeill and J. B. E. Burch,
unpublished result.
ACKNOWLEDGEMENTS
We thank Leonard Cohen, Martin Nemer, and
Robert Perry for valuable discussions; Charles Emerson for plasmid
pPD46.21; and Todd Evans for a chicken genomic library. We also
acknowledge technical support from several core facilities at Fox Chase
Cancer Center (Automated DNA Sequencing, DNA Synthesis, Tissue Culture, Transgenic Mouse, Experimental Histopathology, and Secretarial Services).
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