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Volume 272, Number 48, Issue of November 28, 1997
pp. 30009-30016
Isolation of a cDNA Coding for
L-Galactono- -Lactone Dehydrogenase, an Enzyme involved
in the Biosynthesis of Ascorbic Acid in Plants
PURIFICATION, CHARACTERIZATION, cDNA CLONING, AND EXPRESSION
IN YEAST*
(Received for publication, August 11, 1997)
Jens
Østergaard
,
Geert
Persiau
,
Mark W.
Davey
,
Guy
Bauw
and
Marc
Van Montagu
§
From the Laboratorium voor Genetica, Department of Genetics,
Flanders Interuniversity Institute for Biotechnology, Universiteit
Gent, K.L. Ledeganckstraat 35, B-9000 Gent, Belgium
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
ABSTRACT
L-Galactono- -lactone
dehydrogenase (EC 1.3.2.3; GLDase), an enzyme that catalyzes the final
step in the biosynthesis of L-ascorbic acid was purified
1693-fold from a mitochondrial extract of cauliflower (Brassica
oleracea, var. botrytis) to apparent homogeneity with an overall
yield of 1.1%. The purification procedure consisted of anion exchange,
hydrophobic interaction, gel filtration, and fast protein liquid
chromatography. The enzyme had a molecular mass of 56 kDa estimated by
gel filtration chromatography and SDS-polyacrylamide gel
electrophoresis and showed a pH optimum for activity between pH 8.0 and
8.5, with an apparent Km of 3.3 mM for
L-galactono- -lactone. Based on partial peptide sequence
information, polymerase chain reaction fragments were isolated and used
to screen a cauliflower cDNA library from which a cDNA encoding
GLDase was isolated. The deduced mature GLDase contained 509 amino acid
residues with a predicted molecular mass of 57,837 Da. Expression of
the cDNA in yeast produced a biologically active protein displaying
GLDase activity. Furthermore, we identified a substrate for the enzyme
in cauliflower extract, which co-eluted with
L-galactono- -lactone by high-performance liquid
chromatography, suggesting that this compound is a naturally occurring
precursor of L-ascorbic acid biosynthesis in
vivo.
INTRODUCTION
Vitamin C or ascorbic acid
(L-AA)1 is an
important metabolite for most living organisms present in millimolar
concentrations and is well known for its antioxidant properties. Its
precise functions in plants is still poorly understood, although it is known to play an important role in the antioxidant system that protects
plants from oxidative damage resulting from biotic and abiotic stresses
as well as being a cofactor for a number of hydroxylase enzymes.
L-AA is synthesized by all higher plants and by nearly all
higher animals except humans, other primates, guinea pigs, bats, and
some birds (1-3). L-AA has also been reported to be
present in a number of yeasts (4), but several reports suggest that L-AA analogues, rather than L-AA, are present
in microorganisms (5-7).
The biosynthesis of L-AA follows different pathways in the
animal and the plant kingdom. In animals, D-glucose serves
as the first committed precursor in the biosynthesis of
L-AA and the last step in the pathway is catalyzed by a
microsomal L-gulono- -lactone oxidase (EC 1.1.3.8), which
oxidizes L-gulono- -lactone (L-GuL) to
L-AA. This enzyme has been isolated and characterized from rat, goat, and chicken (8, 9).
Despite the importance of L-AA in plants, the biosynthetic
pathway has still not been established, although current evidence suggests the existence of two discrete routes. A biosynthetic pathway
from D-galactose proceeding via
L-galactono- -lactone (L-GL) has been
proposed as long ago as 1954 by Isherwood et al. (10) and
Mapson et al. (11), based on initial studies of the oxidation of L-GL to L-AA by the enzyme
L-galactono- -lactone dehydrogenase (GLDase). GLDase
activity has been described (11-13) in plants such as pea, cabbage,
cauliflower florets, and potato, and recently Ôba et
al. (14) reported a purification of this enzyme from sweet potato
roots. Loewus (15) has proposed an alternative pathway in which
L-AA is synthesized from D-glucose via
L-sorbosone. The presence of an enzyme able to convert
L-sorbosone to L-AA with concomitant reduction
of NADP was demonstrated in bean and spinach leaves (16, 17).
Conceivably, these distinct routes might be present in different
subcellular compartments or in different plant species.
Here, we report the purification and characterization of GLDase from
cauliflower florets, followed by isolation and sequencing of the
corresponding cDNA. This is the first description of a gene coding
for an enzyme involved in the biosynthesis of L-AA in
plants. The GLDase cDNA has furthermore been expressed in an active
form in yeast, and we have strong indications that the substrate for
GLDase, L-GL is naturally present in plant extracts. These
findings emphasize for the first time the physiological relevance of
the biosynthetic pathway proposed by Isherwood et al. and
Mapson et al. (10, 11).
EXPERIMENTAL PROCEDURES
Materials
Sephacryl SF-200, DEAE-Sepharose, and
phenyl-Sepharose CL-4B were obtained from Pharmacia (Uppsala, Sweden).
L-Galactono- -lactone, D-galactono- -lactone, D-gulono- -lactone,
L-gulono- -lactone, L-mannono- -lactone,
D-galactonic acid, D-glucuronic acid,
D-gluconic acid, and p-hydroxymercuribenzoic
acid were from Sigma. D-Erythronic- -lactone, D-xylonic- -lactone, and N-ethylmaleimide were
purchased from Aldrich. Restriction enzymes were from Pharmacia and
[ -32P]dCTP was from Amersham (Aylesbury, United
Kingdom). Cauliflowers (Brassica oleracea, var. botrytis)
were obtained from a field nearby Gent and kept at 4 °C until
use.
Extraction
Cauliflower florets (7.5 kg) were cut into small
pieces and homogenized in a pre-cooled blender in ice-cold buffer A
(400 mM sucrose, 100 mM sodium phosphate
buffer, pH 7.4) at 1 liter/kg fresh weight. The homogenate was passed
through four layers of Miracloth tissue (Calbiochem-Novabiochem, La
Jolla, CA), and centrifuged at 13,500 × g for 45 min
in a GS3 rotor. The pellet containing the mitochondria (approximately
250 g of material) was stored at 70 °C until further use. The
crude, frozen mitochondrial pellet was gently thawed in a microwave
oven and resuspended in 1/10 volume (750 ml) of buffer A. Cold acetone
( 20 °C) was slowly added while stirring (10 × volumes) and
the mixture was allowed to stand for 30 min at 4 °C. Precipitated
proteins were then collected by filtration through pre-filter paper
(A15; Millipore, Bedford, MA) and resuspended in 1/10 volume of buffer
B (40 mM Tris-HCl, pH 9.0) followed by 5 h dialysis
against 10 volumes of buffer B. The denatured proteins were removed by
centrifugation (10,000 × g for 15 min). GLDase was
then purified from the supernatant and designated as the protein
extract, using the protocol described below ("Enzyme
Purification"). All manipulations concerning the preparation of
extracts and enzyme purification were carried out at 4 °C, unless
stated otherwise.
GLDase Assay
GLDase activity was measured
spectrophotometrically by following the
L-GL-dependent reduction of cytochrome
c at 550 nm and 22 °C. The reaction mixture (1 ml)
consisted of enzyme extract, cytochrome c (1.5 mg/ml), and
L-GL (4.2 mM) in 0.05 M Tris-HCl buffer (pH 8.4). Under these conditions the reaction rate was linear
with respect to time for an initial period of at least 15 min. One unit
of enzyme activity was defined as the amount that oxidized 1 µmol of
L-AA/min. This corresponds to the reduction of 2 µmol of
cytochrome c as described by Ôba et al.
(13). Substrate specificity assays were carried out as described above using 4.2 mM of the different substrates to be tested.
Enzyme Purification
The protein extract (from 250 g of
mitochondrial pellet) was loaded onto a DEAE-Sepharose column (5 × 12 cm) equilibrated with buffer B. After washing with 4 column
volumes of buffer B at 60 ml/h, elution was carried out with 0.5 M NaCl in the same buffer. Fractions of 8 ml were collected
at a flow rate of 60 ml/h, and fractions containing GLDase activity
were pooled and ammonium sulfate was added to a concentration of 1 M. The extract was then loaded on a phenyl-Sepharose CL-4B
column (2.2 × 15.0 cm) equilibrated in buffer C (1 M
ammonium sulfate, 25 mM sodium phosphate, pH 7.0). After
washing with 2 column volumes of buffer C, elution was carried out at
30 ml/h by mixing buffer C with a 600-min linear gradient of 80%
ethylene glycol in 25 mM sodium phosphate (pH 7.0).
Fractions containing GLDase activity were again pooled, concentrated to
10 ml by ultrafiltration using a PM-10 membrane (Amicon, Beverly, MA),
and then applied onto a Sephacryl SF-200 gel filtration column
(2.6 × 94 cm) equilibrated in buffer D (20% ethylene glycol, 40 mM NaCl, 80 mM sodium phosphate, pH 7.4). The
enzyme was eluted with the same buffer at a flow rate of 25 ml/h.
Fractions of 5 ml were collected and fractions with activity pooled.
This preparation could be stored at 4 °C for several weeks without
any detectable loss of activity.
Two gel filtration preparations were combined and concentrated with
buffer exchange to buffer E (20% ethylene glycol, 20 mM Tris-HCl, pH 8.0) by ultrafiltration (PM-10 membrane). The resulting solution was applied to a strong anion exchange column (Resource Q, 6 ml; Pharmacia Biotech Inc.) equilibrated in buffer E and connected to
an FPLC system (Pharmacia). The column was eluted at 1 ml/min with a
gradient of 0-450 mM NaCl in buffer E as follows: 0-85
mM in 18 min, 85-110 mM in 10 min, 110-130
mM in 14 min, and 130-450 mM in 10 min.
Fractions of 1 ml were collected. The activity of the main peak, which
eluted at 120 mM NaCl, was collected and adjusted to pH 6.0 with 50 mM sodium phosphate.
The pooled fractions were loaded onto a Poros 20 SP strong cation
exchange column (PerSeptive Biosystems, Cambridge, MA) equilibrated in
buffer F (20 mM sodium phosphate, pH 6.0, 20% ethylene
glycol) and eluted using the FPLC at a flow rate of 1 ml/min. Elution was carried out with a gradient of 0-500 mM NaCl in buffer
F as follows: 125-225 mM in 40 min and 225-500
mM in 37 min. Fractions of 2 ml were collected. Two peaks
of activity eluted: peak I at 210 mM and peak II at 225 mM NaCl. Peak II was dialyzed against 10 mM
sodium phosphate, pH 7.2, containing 1 mM L-AA
and the volume was reduced to 200 µl by lyophilization (Heto Lab
Equipment, Lyngby, Denmark).
As a final step, the pooled fractions of peak II were separated by HPLC
using a Zorbax gel filtration column GF-250 (9.4 × 250 mm)
(Rockland Technologies Inc., Newport, DE) equilibrated in 750 mM NaCl, 50 mM sodium phosphate (pH 7.2).
Fractions of 1 ml were collected at a flow rate of 1 ml/min.
Protein Determination
The protein concentration of extracts
was determined according to Bradford (18) using bovine serum albumin as
standard.
Determination of Molecular Mass
The molecular mass of the
native GLDase was estimated by gel filtration on a Sephacryl SF-200
column (2.5 × 94 cm) equilibrated in 40 mM NaCl, 80 mM sodium phosphate (pH 7.4). The column was eluted at a
flow rate of 20 ml/h and fractions of 4 ml were collected. The
molecular mass was estimated by comparing the elution of GLDase with
that of the standard proteins: ferritin (450 kDa), alcohol dehydrogenase (150 kDa), bovine serum albumin (66 kDa), carbonic anhydrase (29 kDa), and cytochrome c (12.5 kDa).
SDS-PAGE
Analytical SDS-PAGE was performed in slab gels of
10% polyacrylamide as according to Chua (19). Proteins were visualized either by Coomassie Brilliant Blue R-250 staining (19) or silver nitrate staining (20).
Affinity Retardation Chromatography
Cytochrome c
was covalently bound to thiol-activated Sepharose 4B as described by
Azzi et al. (21) and packed into a column (1.0 × 20 cm) that eluted at flow rates of 8 ml/h in 10 mM sodium phosphate buffer (pH 7.4). Fractions of 2 ml were collected and tested
for activity.
Lycorine Extraction
Lycorine was purified from
non-flowering, whole plants of Crinum jagus or Crinum
asiaticum as described by Davey et
al.2.
Partial Amino Acid Sequence Determination
Purified GLDase
from the Poros 20 SP purification step was applied to SDS-PAGE. The
separated polypeptides were blotted onto polyvinylidene difluoride
membranes (Millipore) as described by Bauw et al. (23).
NH2-terminal and internal amino acid sequence analyses of
the polyvinylidene difluoride-bound proteins were performed as
described by Bauw et al. (24). Trypsin was used for the
in situ digests and the resulting peptides were separated by
reversed-phase HPLC. Amino acid sequencing was performed on a 473 protein sequencer (Applied Biosystems, Foster City, CA).
Isolation of Total RNA and First-strand cDNA
Synthesis
Cauliflower floret tissue (300 mg) was ground to a
powder in liquid nitrogen with a mortar and pestle and RNA was
extracted using a method based on LiCl precipitation as described by
Goormachtig et al. (25). The RNA isolated from cauliflower
florets (4 µg) was used to synthesize first-strand cDNA according
to the instruction manual for SuperscriptTM
Preamplification System for first-strand cDNA synthesis (Life Technologies, Inc., Gaithersburg, MD).
Polymerase Chain Reaction
Degenerate oligonucleotides were
synthesized on an oligonucleotide synthesizer (Applied Biosystems) and
used as primers in polymerase chain reactions. The peptide sequences
used for synthesizing the corresponding coding and complementary
oligonucleotides were designed according to the partial amino acid
sequence obtained earlier, and designated 3, 6, and 8 (underlined in Fig. 5).
Fig. 5.
Nucleotide sequence and predicted amino acid
sequence of GLDase. Nucleotides are numbered from the first base
of the cDNA insert. The deduced amino acid sequence is indicated
below the nucleotide sequence in single-letter code. The first
methionine of the open reading frame is designated as the first amino
acid of the putative polypeptide. The termination codon is indicated by
an asterisk. Amino acid sequences determined from GLDase
polypeptides are underlined and numbered 1-9.
Degenerate oligonucleotides were designed based on peptides 3, 6, and
8. " " indicates the point of breakage forming the 26- and 30-kDa
degradation products separated by SDS-PAGE (Fig. 2).
[View Larger Version of this Image (56K GIF file)]
First-strand cDNA synthesized from cauliflower florets was used as
a template. The amplification mixture consisted of template, polymerase
chain reaction buffer, 200-300 ng of each primer, 2.5 mM
cNTP, and 1 unit of Taq polymerase in a total volume of 50 µl. The amplification program consisted of 32 cycles of denaturation (94 °C, 1 min), annealing (50 °C, 1 min), and primer extension (72 °C, 2 min). Products of the reaction were separated on 1% agarose gels, excised, and then purified according to the QIAEX Handbook (Diagen GmbH, Hilden, Germany). The purified products were
cloned into a pGEM-T vector (Promega, Madison, WI).
Screening of cDNA Library
A cauliflower cDNA
library constructed in ZAP II (Stratagene, La Jolla, CA) was used.
Aliquots of the cDNA library were plated out using
Escherichia coli XL-1 Blue cells on 23 × 23-cm baking plates (Nunc, Roskilde, Denmark) containing NZY agar. Approximately 600,000 plaques of the library were transferred onto duplicate nylon
membranes (Hybond N+; Amersham). The membranes were treated
in accordance with the manufacturer's instructions for plaque
blotting. DNA was fixed to membranes by irradiation with ultraviolet
light (UV Stratalinker; Stratagene). A 250-bp polymerase chain
reaction-amplified fragment was labeled with
[ -32P]dCTP using a random primed DNA labeling kit
(Boehringer, Mannheim, Germany) and subsequently used as probe for
screening the cDNA library. The membranes were washed for 4 h
at 65 °C in hybridization buffer (1% (w/v) bovine serum albumin,
7% (w/v) SDS, 1 mM EDTA, and 0.25 M sodium
phosphate, pH 7.2), before 20 h incubation with the
32P-labeled probe in hybridization buffer at 65 °C. The
membranes were then rinsed twice for 15 min with 2 × SSC (1 × SSC: 150 mM NaCl, 15 mM
Na3-citrate, pH 7.0) and 1% SDS at room temperature and
exposed to X-Omat AR film (Kodak, Rochester, NY) with an enhancer screen for autoradiography. Plaque-purified phage clones were converted
into phagemids (Bluescript SK-/+; Stratagene) by in vivo
excision using the ExAssistTM System.
DNA Sequence Determinations
DNA sequence determinations
were carried out in accordance with protocols obtained from Applied
Biosystems. Initial sequences were obtained by use of T7 and T3 vector
primers. To complete the sequences on both strands, cDNA-specific
primers were used. The sequence analyses were carried out using
software of the Genetics Computer Group (Madison, WI).
Expression in Yeast
To express the GLDase cDNA in yeast
(Saccharomyces cerevisiae), the Bluescript vector containing
the full-length cDNA was digested with ApaI and
KpnI and a 27-bp adapter containing a NotI restriction site subsequently ligated into the
ApaI-KpnI-linearized vector. The resulting
construct containing two NotI restriction sites was cloned
into the NotI restriction sites of the pFL61 vector (26).
Yeast cells of the strain W303B (Mat , ade2, ura3, his3, trp1,
leu2, can1-100) (27) were transformed by the method of Dohmen
et al. (28) and plated on selective 1.5% agar plates (lacking uracil) containing minimal SD medium (0.2% yeast nitrogen base (Difco, Detroit, MI), 0.7% ammonium sulfate, 2.7% glucose) supplemented with adenine, tryptophan, leucine at 20 µg/ml, and histidine at 10 µg/ml (as above minus agar). Transformed cells were
transferred to liquid SD medium and grown for 3 days at 30 °C. The
cells were collected by centrifugation (8,000 × g, 15 min), washed, and resuspended in 50 mM Tris-HCl (pH 8.0).
For GLDase activity tests and protein determinations the cells were
disrupted by two passages through a French Press after a cycle of
freezing ( 70 °C) and thawing.
Extraction and HPLC Analysis of L-GL
Up to
1 g of plant tissue was first thoroughly homogenized using a
pestle and mortar in liquid nitrogen, and extracted using 10%
trichloroacetic acid to precipitate proteins and inhibit degradative enzymes. After filtration and partitioning against water-saturated diethyl ether to remove trichloroacetic acid, samples were concentrated and injected onto the C18 HPLC column, eluted with 0.1%
trifluoroacetic acid. Peaks eluting in the region of L-GL
elution were collected and tested for their ability to serve as a
substrate for GLDase. Analogous peaks from up to 10 runs were combined,
dried under vacuum, and re-injected onto the aminopropyl HPLC column
for weak anion exchange. Once again peaks eluting in the region of the L-GL standard were collected and tested for their ability
to serve as a substrate for GLDase. Positive peaks from several runs
were pooled, concentrated, and finally reinjected on a C18
reversed-phase HPLC column eluted with phosphoric acid (pH 2.5). HPLC
was carried out using a 600E pump (Waters, Milford, MA) and a Waters
996 diode-array detector. Injections (20-40 µl) were made using a
WISP 412 (Waters) autosampler onto a C18, 3-µM spherical
particle size, 250 × 4.6 mm inner diameter, reversed-phase HPLC
column (Bio-Rad), fitted with a 10-mm guard column. Separations were
carried out isocratically at 800 µl/min with phosphoric acid (pH
2.5), or 0.1% trifluoroacetic acid as mobile phase. Data were
collected and analyzed, and the entire system was controlled using the
Millenium 2010 (v1.15) chromatography management system (Waters). Weak
anion exchange separations were carried on a 250 × 3.6-mm
aminopropyl column (Phenomenex Inc., Torrance, CA), eluted
isocratically with 15% (v/v) 20 mM
KH2PO4 (pH 6.0), in acetonitrile. The column
was regenerated after each analysis with a 10-min linear gradient of
15-50% acetonitrile in 20 mM
KH2PO4 (pH 6.0) at 1 ml/min. Strong anion
exchange HPLC with pulsed amperometric electrochemical detection was
carried out on the same system fitted with an HP 1049A electrochemical detector containing a gold amalgam-working electrode at an operating potential of +100 mV. Separations were performed on a 300 × 4.6-mm, Dionex PA-100 strong anion exchange column (Dionex Corp.,
Sunnyvale, CA) eluted with a 20-min linear gradient of 0 to 200 mM sodium acetate in 3 ml/liter NaOH.
RESULTS
Enzyme Purification
A summary of the purification of GLDase from cauliflower florets
is presented in Table I. As the enzymatic
activity was found to be most stable in 20% ethylene glycol this
reagent was included in all buffers except for buffers A and B used in
the first two purification steps. Interestingly, after the
DEAE-Sepharose step the total GLDase activity increased slightly,
probably due to removal of inhibitory compounds present in the crude
extract. The first three purification steps had relatively little
influence on the purity of GLDase, but the FPLC Resource step (strong
anion exchange) resulted in an increase in the purification factor from 63 to 900, although there was a corresponding decrease in recoveries to
only 47% compared with the activity present in the gel filtration pool. After passage through the strong cation exchange column (Poros 20 SP), GLDase activity was resolved into two peaks designated I and II
(Fig. 1). The activity forming the latter
peak was used for further analysis. At this stage GLDase was purified
1693-fold from the initial mitochondrial fraction with a recovery of
1.1% (Table I). The purity of the final enzyme preparation was
confirmed by SDS-PAGE, where we consistently obtained three polypeptide bands corresponding to approximately 56, 30, and 26 kDa (Fig. 2). Further purification of the enzyme by
a high resolution gel filtration on a Zorbax GF 250 column did not
result in elimination of the 30- and 26-kDa polypeptide bands; and
subsequent amino acid sequence analyses revealed them to be breakdown
products of the 56-kDa band. The native molecular mass of the enzyme
was estimated to be approximately 56 kDa by Sephacryl SF-200 (Fig. 3) and Zorbax GF 250 high resolution gel
filtration.
Table I.
Purification scheme for GLDase
Mitochondrial extract from 15 kg of cauliflower florets were used for
the preparation
|
| Step |
Volume |
Protein |
Activity
|
Fold |
Recovery
|
| Total |
Specific
|
|
|
ml |
mg |
units |
units/mg |
|
%
|
| Acetone
precipitation |
2,500 |
1,510 |
44,900 |
30 |
1 |
100 |
| DEAE
ion exchange |
83 |
55 |
46,500 |
845 |
28 |
104
|
| Phenyl-Sepharose |
38 |
21 |
30,800 |
1,467 |
49 |
69 |
| Gel
filtration |
54 |
11 |
20,900 |
1,900 |
63 |
47 |
| FPLC Resource
Q |
32 |
0.3 |
8,100 |
27,000 |
900 |
18 |
| FPLC Poros 20 SP |
4 |
0.01 |
508 |
50,800 |
1,693 |
1.1 |
|
Fig. 1.
Separation and purification of GLDase
activity ( ) peak I and peak II by a Poros SP cation exchange
column. Protein (A280) ( ).
[View Larger Version of this Image (25K GIF file)]
Fig. 2.
SDS-PAGE. Lane A, molecular mass
standards; lane B, GLDase peak II from the Poros SP (strong
anion exchange) purification step, analyzed by SDS-PAGE after an
additional high-resolution HPLC gel filtration step. A polypeptide band
corresponding to approximately 56 kDa (GLDase), and two degradation
products of 30 and 26 kDa (confirmed by amino acid sequence analyses)
were visualized by silver nitrate staining.
[View Larger Version of this Image (41K GIF file)]
Fig. 3.
Estimation of molecular mass of GLDase.
The native molecular mass was estimated by gel filtration
chromatography on Sephacryl SF-200. The arrow indicates
GLDase activity. Molecular mass standards used were: 1)
ferritin (450 kDa); 2) alcohol dehydrogenase (150 kDa);
3) bovine serum albumin (66 kDa); 4) carbonic
anhydrase (29 kDa); and 5) cytochrome c (12.5 kDa).
[View Larger Version of this Image (15K GIF file)]
Partial Amino Acid Sequence Determination of Purified GLDase
Polypeptides
NH2-terminal sequence analysis of the complete 56- and
30-kDa polypeptide bands were found to be identical, and the partially determined sequence of the 26-kDa band was located within the deduced
amino acid sequence of the GLDase cDNA (Asp-273 to Leu-289). Trypsin digestions of the 56-kDa protein yielded a series of peptides which were separated by reversed-phase HPLC. A number of the peptides were subjected to partial sequence analysis and could again be located
in the GLDase cDNA, as indicated in Fig. 5.
Characterization
Substrate Specificity and pH Dependence
Various isomeric
compounds were tested as possible substrates for the purified GLDase
using cytochrome c as electron acceptor. These were
L-GL, D-galactono- -lactone,
D-gulono- -lactone, L-GuL, D-erythronic- -lactone,
D-xylonic- -lactone, L-mannono- -lactone, D-galactonic acid, D-glucuronic acid, and
D-gluconic acid. Apart from L-GL, none of the
compounds tested could serve as a substrate for GLDase because no
reduction of cytochrome c was observed.
GLDase obeyed Michaelis-Menten-type kinetics using L-GL as
substrate. With the method of Lineweaver and Burk (Fig.
4), the Km value was
determined to be 3.3 mM with a Vmax
of 7.1 units/min. Concentrations of L-GL used were from 1.0 to 32.6 mM. Substrate inhibition was observed at 32.6 mM.
Fig. 4.
Lineweaver-Burk plot of GLDase activity as a
function of L-galactono- -lactone concentration.
[View Larger Version of this Image (14K GIF file)]
The pH dependence of the enzyme activity was examined using 50 mM sodium phosphate buffer in the pH range from 6.0 to 7.6 and 50 and 100 mM Tris-HCl in the range between 7.4 and 8.8 at 22 °C with 4.2 mM L-GL. A broad maximum
of activity between pH 8.0 and 8.5 was observed (results not
shown).
Electron Acceptors
The enzyme assay is based on the reduction
of cytochrome c by GLDase, in which for each micromole of
oxidized L-GL, 2 µmol of cytochrome c are
reduced, because the L-AA formed is spontaneously oxidized
by cytochrome c to dehydroascorbic acid. The purified GLDase
showed strict specificity for cytochrome c, and neither FAD,
NAD, NADP, nor molecular oxygen were able to serve as electron acceptors for the enzyme.
Inhibitors/Stimulators
The effect of various substrate
analogues, organic inhibitors, and some divalent metal ions were
examined for their influence on the enzyme activity. The oxidation of
L-GL by GLDase was tested in the presence of equimolar
concentrations of each of the following compounds:
D-galactono- -lactone, D-gulono- -lactone,
L-gulono- -lactone, D-erythronic- -lactone,
D-xylonic- -lactone, L-mannono- -lactone, D-galactonic acid, D-glucuronic acid, and
D-gluconic acid. None of these had any influence on the
reaction rate.
Of the divalent metal salts we tested, MgCl2,
CaCl2, and SrCl2 had no effect on the GLDase
activity at concentrations up to 15 mM. The chelating agent
EDTA had no significant effect on the enzyme activity supporting the
conclusion that there was no metal requirement for the enzymatic
activity.
Sulfhydryl-modifying agents, however, were able to partially inhibit
GLDase: N-ethylmaleimide, monoiodoacetic acid, and
p-hydroxymercuribenzoic acid inhibited the enzyme activity
by 18% at 12.5 mM, 42% at 26.9 mM, and 81%
at 0.4 mM, respectively. These observations indicate that
cysteine residues play an important role in the enzyme catalysis. We
did not observe any inhibition of the GLDase-dependent
reduction of cytochrome c in the presence of 5.2 mM riboflavin, a well known flavoprotein inhibitor
(29-31).
Lycorine, an alkaloid isolated from members of the
Amaryllidaceae has been reported to be a specific inhibitor
of ascorbic acid biosynthesis in plants and animals at concentrations
as low as 1 µM (32-34); once again, however, no
influence of lycorine on GLDase activity could be found at
concentrations of up to 100 µM.
Cytochrome c Affinity Chromatography
Partly purified enzyme
extract was observed to be slightly retarded compared with other
proteins (measured as the absorption at 280 nm) when eluted from a
cytochrome c affinity column. This indicated interaction
between GLDase and cytochrome c.
Isolation and Sequencing of GLDase cDNA Clone
DNA fragments were obtained by polymerase chain reaction
amplification of oligo(dT)-primed cDNA using degenerate
oligonucleotides (based on the peptide sequences) as primers. These DNA
fragments were subcloned into a pGEM-T vector and sequenced. One 400-bp fragment contained a nucleotide sequence which corresponded to the
amino acid sequence of one of the sequenced internal peptides in
addition to the sequences corresponding to the primers. Therefore, this
fragment was radiolabeled and used as a probe to screen a cDNA
library from cauliflower. We screened 2 × 106 plaques
resulting in isolation of several positive clones. After in
vivo excision of the Bluescript plasmid followed by digestion with
EcoI and KpnI, the two longest cDNA inserts
were found to be approximately 2,000 bp. Subsequent subcloning and
sequencing revealed an uninterrupted open reading frame of 1803 nucleotides, containing all of the partially sequenced tryptic
peptides, the NH2-terminal amino acid sequence, the first
ATG codon (position 56) representing the consensus sequence of an
initiator codon (35), and a TAA terminator codon. The presence of these
elements showed that the full-length cDNA corresponding to the
purified protein had been isolated. Fig.
5 shows the deduced amino acid sequences
of the 1803-bp open reading frame coding for 600 amino acids, a 55-bp
putative 5 -noncoding region, and a 206-bp 3 -noncoding region
including a poly(A) tail. A hexanucleotide AATAAA consensus signal for
polyadenylation is found 20 nucleotides before the poly(A)+
tract. Interestingly, nucleotides coding for the determined
NH2-terminal amino acid sequence were found 270 bp
downstream from the initiator codon, indicating that the protein is
synthesized as a pre-protein (600 amino acids with a predicted
molecular mass of 67,829 Da). The resulting mature protein of 509 amino
acids has a calculated molecular mass of 57,837 Da and a theoretical pI
value of 6.85. A putative mitochondrial signal is also present
(36).
Expression in Yeast
The GLDase cDNA was cloned into a pFL61 yeast vector (26) in
both the sense and antisense orientations relative to the
phosphoglycerate kinase promoter and terminator. Untransformed and
transformed yeasts were grown and extracts were prepared and tested for
GLDase activity. Extracts from yeast transformed with a sense-oriented GLDase cDNA showed a specific GLDase activity of 3.0 units/min/mg protein compared with those made from extracts from untransformed yeast
and yeast transformed with antisense orientated GLDase cDNA in
which no GLDase activity could be measured with L-GL as
substrate (Fig. 6).
Fig. 6.
Expression in yeast. GLDase activity in
nontransformed yeast ( ), and in yeast transformed with the GLDase in
sense orientation ( ), and in antisense orientation ( ).
[View Larger Version of this Image (16K GIF file)]
HPLC Analysis of L-GL
We used several different systems for the analysis of
L-GL by HPLC. These included ion suppression reversed-phase
HPLC, weak anion exchange HPLC, and strong anion exchange HPLC. In no
case was it possible to obtain unequivocal resolution of
L-GL from all other sugar-lactone analogues, but
semipreparative separations using weak anion exchange and
reversed-phase HPLC in combination with spectrophotometric assays for
GLDase activity, allowed us to consistently identify a fraction that
co-migrated with L-GL standard and which served as a
substrate for the GLDase-based reduction of cytochrome c.
Peaks co-eluting in all three systems with L-GL standard
were found to be able to serve as a substrate for GLDase (results not
shown). This indirect evidence strongly suggests the presence of a
natural substrate for GLDase in plant tissue extracts. In addition to
this observation, acid extracts of plant tissues were resolved using
pulsed amperometric detection and strong anion exchange on a Dionex
PA-100 column. Under conditions of high pH (pH 11-12), it is possible
to ionize neutral carbohydrates at the C-2 OH position, allowing the
separation on appropriate ion exchange columns. Analysis of acid
extracts from cauliflower and parsley by strong anion exchange HPLC
with pulsed-amperometric detection at a gold electrode showed the
presence of small amounts of a peak that co-migrated with
L-GL (data not shown). However, in this system,
L-GL also co-migrates with DL-GuL and with
D-GL, so that it is not possible to unequivocally
demonstrate the presence of this compound as a natural substrate.
DISCUSSION
GLDase was purified 1693-fold from cauliflower florets by a 5-step
method with 1.1% recovery. The loss in recovery was approximately 20%
in each purification step. This compares favorably with the results of
Ôba et al. (14) who recently published a 5-step purification of GLDase from sweet potato roots in which the enzyme was
purified 294-fold with a recovery of 0.9% with a specific activity of
37,000 units/mg. By comparison, after our purification method we
obtained a specific activity of 50,800 units/mg.
From the Poros SP column (strong anion exchange) GLDase activity was
separated into two peaks of activity (I and II), suggesting the
existence of at least two isoforms of GLDase. The most pure and
abundant peak, peak II, was subjected to high-resolution gel filtration
by HPLC and analyzed by SDS-PAGE (Fig. 2). A polypeptide band
corresponding to approximately 56 kDa and two degradation products
(confirmed by amino acid sequence analysis) of 30 and 26 kDa separated
on the gel.
In most respects, the physical characteristics of GLDase from
cauliflower are similar to those of the enzyme purified from sweet
potato roots. With regard to the substrate specificity we found like
Mapson and Breslow (12) that GLDase was absolutely specific for
L-GL; Ôba et al. (14), however, observed a
1% oxidation of L-GuL relative to L-GL by the
sweet potato enzyme. We measured the Km value of
GLDase for L-GL as substrate to be 3.3 mM which
is again in the same range as the value obtained by Mapson and Breslow
(12), but considerably higher than the value of 0.12 mM
obtained by Ôba et al. (14).
However, the native molecular mass of 56 kDa determined by gel
filtration is identical to the value obtained by Ôba et
al. (14). According to our experiments, GLDase has a pH optimum between 8.0 and 8.5, which again corresponds well with the results obtained by Mapson and Breslow (12) and Ôba et al.
(14).
The GLDase enzyme from cauliflower seems to require sulfhydryl groups
for its activity, as reduced activity was observed in the presence of
reagents which inactivate these groups. Strongest inhibition was
observed with 0.4 mM p-hydroxymercuribenzoic
acid which caused 81% inhibition. These observations are in accordance with results obtained by Mapson and Breslow (12), who obtained 50% or
more inhibition with all sulfhydryl group-modifying agents tested.
Arrigoni et al. (37) recently published results from which
they concluded that the alkaloid lycorine acts by inhibiting the
conversion of L-GL to L-AA. Consequently, the
enzyme we have purified from cauliflower is different to the homologous
enzyme which Arrigoni et al. (37) used for their
measurements. These authors also isolated GLDase activity from
cauliflower using a different protocol including detergent. We were
unable to detect any influence of lycorine on the activity of GLDase
from cauliflower at concentrations of up to 100 µM
lycorine.
Based on the partial amino acid sequences of tryptic peptides, the
cDNA for GLDase was cloned and characterized. The complete amino
acid sequence deduced from the cDNA and the localization of the
NH2-terminal amino acid sequence suggest that the mature GLDase protein is preceded by a 91-amino acid pre-peptide. We consider
GLDase from cauliflower to be a mitochondrial enzyme as it was purified
from a mitochondrially enriched extract from cauliflower florets. This
corresponds well with the fact that the deduced pre-protein contains a
relatively high number of Ala, Leu, Arg, and Ser residues (11, 10, 8, and 10, respectively); and relatively few Asp, Glu, Ile, and Val
residues (0, 3, 2, and 0, respectively), which is characteristic for
polypeptides targeted to the mitochondria (38, 39). In addition, the
GLDase pre-protein cleavage site FR YA resembles a cleavage site
motif (RXY (S/A) which is relatively common in a number of higher and
lower eukaryotes (36). These data are in accordance with results
obtained by Ôba et al. (13) who by sucrose density
gradient cell fractionation of extract from potato tuber tissue
detected GLDase activity in the same fractions as fumarase, a
mitochondrial marker enzyme. By the same technique, Mutsuda et
al. (40) judged the enzyme to be located in mitochondrial
membranes of spinach leaves. The relative molecular mass of GLDase was
predicted to be 57,837 Da from the cDNA, which corresponds well
with the molecular mass of 56 kDa, estimated by SDS-PAGE and gel
filtration. We found one potential N-glycosylation site
Asn-X-Ser/Thr at position 13 in the mature protein, but the
enzyme was unretarded on a lectin concanavalin A column, which binds
molecules containing an -D-mannopyranosyl, -D-glucopyranosyl, and sterically related sugars
(41).
It has been suggested that GLDase contains a covalently bound flavin
moiety as prosthetic group, because inhibition of GLDase activity by
flavoprotein inhibitors was reported by Mapson and Breslow (12) and
Ôba et al. (14). However, we could not observe any
inhibition of GLDase from cauliflower by riboflavin or obtain the
typical flavin protein absorption spectrum from the purified GLDase. In
addition, there was no significant homology between the deduced amino
acid sequence of cauliflower GLDase and the sequences of flavin-binding
regions of the following flavoenzymes: rat liver dimethylglycine
dehydrogenase (42), beef heart succinate dehydrogenase (43), E. coli succinate dehydrogenase (44), E. coli fumarate
reductase (45), Arthrobacter oxidans
6-hydroxy-D-nicotine oxidase (46), and rat liver
NADPH-cytochrome P-450 oxidoreductase (47).
Interestingly, an homology search with cauliflower GLDase in protein
data bases revealed that the first 230 NH2-terminal amino acid of GLDase had 28% identity with an NH2-terminal
stretch of L-gulono- -lactone oxidase (EC 1.1.3.8) from
rat (48), 26% with a yeast
clone,3 and 16% with an
NH2-terminal stretch of D-lactate
ferricytochrome c oxidoreductase from yeast (22) (Fig.
7). This conservation between the
NH2-terminal parts of L-gulono- -lactone
oxidase and GLDase could indicate that this domain is involved in
similar functional roles.
Fig. 7.
Sequence comparison. Alignment of the
amino acid sequence (residue 29 to 509) of GLDase (gldase)
with the amino acid sequence of L-gulono- -lactone
oxidase from rat (glo) (48), a sequence from the
S. cerevisiae sequencing project
(yeast),3 and D-lactate ferricytochrome
c oxidoreductase from S. cerevisiae (lac) (22). Dashes represent regions where the
sequences have been extended to allow optimal sequence alignment.
Identical residues are indicated by shaded letters.
Asterisks indicate identical residues present in all four
sequences. Indicated numbers on the right refer
to the amino acid positions used for GLDase in Fig. 5.
[View Larger Version of this Image (54K GIF file)]
Here, we have clearly shown that the isolated GLDase is 100% specific
for L-GL and that a peak that co-elutes with
L-GL in four different HPLC separation systems, and can
serve as a substrate for GLDase, is naturally present in plant
extracts. Although we cannot unequivocally rule out the presence of
some other compound, the high substrate specificity of GLDase strongly
suggests that L-GL is a natural constituent of plant
tissues and that this pathway of L-AA biosynthesis is
physiologically relevant.
The results presented here are the first important step in the
characterization of the biosynthetic pathway of L-AA in
plants. In our laboratory we are progressing toward making plants
transformed with the GLDase cDNA, which will allow us to
down-regulate the expression of GLDase by antisense technology and
study the role of L-AA in plants. Furthermore, in the near
future the isolation of the GLDase cDNA may give us the possibility
to engineer crops containing stably increased levels of vitamin C.
FOOTNOTES
*
This work was supported in part by grants from the Belgian
Program on Interuniversity Poles of Attraction (Prime Minister's Office, Science Policy Programming, number 38), the Vlaams
Actieprogramma Biotechnologie (ETC 002), and the Krediet aan Navorsers
(Fund for Scientific Research-Flanders).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) Z97060.
Recipient of a Human Capital and Mobility postdoctoral fellowship
of the European Union.
§
To whom correspondence should be addressed: Laboratorium voor
Genetica, Universiteit Gent, K. L. Ledeganckstraat 35, B-9000 Gent, Belgium. Tel.: 32-9-2645170; Fax: 32-9-2645349; E-mail: mamon{at}gengenp.rug.ac.be.
1
The abbreviations used are: L-AA,
L-ascorbic acid; FPLC, fast protein liquid chromatography;
HPLC, high-performance liquid chromatography; L-GL,
L-galactono- -lactone; L-GuL,
L-gulono- -lactone; GLDase,
L-galactono- -lactone dehydrogenase; PAGE, polyacrylamide gel electrophoresis; bp, base pair(s).
2
M. W. Davey, G. Persiau, A. De Bruyn, J. Van Damme, G. Bauw, and M. Van Montagu, submitted for publication.
3
DBSource, EMBL, locus SC9725, accession
Z46660.
ACKNOWLEDGEMENTS
We thank Prof. J. S. Hyams (University
College, London, UK) for providing the cauliflower cDNA library,
Esmeralda Posada for technical assistance, Wilson Ardiles for DNA
sequencing, Jørgen Holst Christensen and Carmen Simon-Mateo for
helpful suggestions, and Martine De Cock for layout.
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W.-K. Huh, S.-T. Kim, H. Kim, G. Jeong, and S.-O. Kang
Deficiency of D-Erythroascorbic Acid Attenuates Hyphal Growth and Virulence of Candida albicans
Infect. Immun.,
June 1, 2001;
69(6):
3939 - 3946.
[Abstract]
[Full Text]
[PDF]
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C. G. Bartoli, G. M. Pastori, and C. H. Foyer
Ascorbate Biosynthesis in Mitochondria Is Linked to the Electron Transport Chain between Complexes III and IV
Plant Physiology,
May 1, 2000;
123(1):
335 - 344.
[Abstract]
[Full Text]
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J. E. Pallanca and N. Smirnoff
The control of ascorbic acid synthesis and turnover in pea seedlings
J. Exp. Bot.,
April 1, 2000;
51(345):
669 - 674.
[Abstract]
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[PDF]
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P. L. Conklin, S. A. Saracco, S. R. Norris, and R. L. Last
Identification of Ascorbic Acid-Deficient Arabidopsis thaliana Mutants
Genetics,
February 1, 2000;
154(2):
847 - 856.
[Abstract]
[Full Text]
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M. W. Davey, C. Gilot, G. Persiau, J. Østergaard, Y. Han, G. C. Bauw, and M. C. Van Montagu
Ascorbate Biosynthesis in Arabidopsis Cell Suspension Culture
Plant Physiology,
October 1, 1999;
121(2):
535 - 544.
[Abstract]
[Full Text]
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E. Siendones, J. A. González-Reyes, C. Santos-Ocaña, P. Navas, and F. Córdoba
Biosynthesis of Ascorbic Acid in Kidney Bean. L-Galactono-gamma -Lactone Dehydrogenase Is an Intrinsic Protein Located at the Mitochondrial Inner Membrane
Plant Physiology,
July 1, 1999;
120(3):
907 - 912.
[Abstract]
[Full Text]
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J. E. Pallanca and N. Smirnoff
Ascorbic Acid Metabolism in Pea Seedlings. A Comparison of D-Glucosone, L-Sorbosone, and L-Galactono-1,4-Lactone as Ascorbate Precursors
Plant Physiology,
June 1, 1999;
120(2):
453 - 462.
[Abstract]
[Full Text]
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P. L. Conklin, S. R. Norris, G. L. Wheeler, E. H. Williams, N. Smirnoff, and R. L. Last
Genetic evidence for the role of GDP-mannose in plant ascorbic acid (vitamin C) biosynthesis
PNAS,
March 30, 1999;
96(7):
4198 - 4203.
[Abstract]
[Full Text]
[PDF]
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S. Choe, B. P. Dilkes, B. D. Gregory, A. S. Ross, H. Yuan, T. Noguchi, S. Fujioka, S. Takatsuto, A. Tanaka, S. Yoshida, et al.
The Arabidopsis dwarf1 Mutant Is Defective in the Conversion of 24-Methylenecholesterol to Campesterol in Brassinosteroid Biosynthesis
Plant Physiology,
March 1, 1999;
119(3):
897 - 908.
[Abstract]
[Full Text]
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Copyright © 1997 by the American Society for Biochemistry and Molecular Biology.
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