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Volume 272, Number 51, Issue of December 19, 1997
pp. 32163-32168
(Received for publication, July 25, 1997, and in revised form, September 15, 1997)
From the Ruttenberg Cancer Center, Mount Sinai School of Medicine,
New York, New York 10029, the Regulatory proteins are often ubiquitinated,
depending on their phosphorylation status as well as on their
association with ancillary proteins that serve as adapters of the
ubiquitination machinery. We previously demonstrated that c-Jun is
targeted for ubiquitination by its association with inactive c-Jun
NH2-terminal kinase (JNK). Phosphorylation by
activated JNK protects c-Jun from ubiquitination, thus by prolonging
its half-life. In the study reported here, we determined the ability of
JNK to target ubiquitination of its other substrates (Elk1 and
activating transcription factor 2 (ATF2)) and associated proteins (ATF2
and JunB). We demonstrate that phosphorylation by JNK protects ATF2,
but not Elk1, from JNK-targeted ubiquitination. We also show that
association of inactive JNK with JunB or ATF2 is necessary to target
them for ubiquitination. Unlike its targeting of c-Jun, JNK requires
additional cellular components, yet to be identified, to target the
ubiquitination of ATF2. Elk1 is phosphorylated by JNK, but JNK neither
associates with nor targets Elk1 for ubiquitination. The implications
for the dual role of JNK in the regulation of ubiquitination and
stability of c-Jun, ATF2, and JunB in normally growing
versus stressed cells are discussed.
The cellular response to stress activates early response proteins
by both transcription and post-translational modifications which
dictate the cell's ability to undergo cell cycle arrest for DNA damage
repair or to initiate programmed cell death. Among the stress-modulated
factors that contribute to the cell's ability to cope with stress are
c-Jun and ATF2,1 both of
which are activated by their NH2-terminal phosphorylation via stress-activated protein kinases (c-Jun NH2-terminal
kinases; JNK) (1-3). JNKs are proline-directed serine/threonine
kinases, which are activated by a wide variety of stimuli, including
physical and chemical DNA-damaging agents and inhibitors of protein
synthesis as well as heat and osmotic shock (reviewed in Kyriakis and
Avruch (4)). Different forms of stress utilize alternate cellular pathways for JNK activation (5). For example, JNK activation by UV
irradiation requires their phosphorylation by the upstream kinase,
mitogen-activated protein-kinase kinase 4 (6), the association of JNK
with p21ras (7), the presence of nuclear DNA lesions (8, 9),
and inactivation of a redox-sensitive
inhibitor.2
JNK were first identified and named as a Jun-associated kinases (11),
reflecting their strong hydrophobic interaction with c-Jun. JNK-c-Jun
association is ATP-independent and is required for efficient
ATP-dependent phosphorylation of c-Jun at flanking phosphoacceptor sites (Ser63 and Ser73). The
mechanism by which JNK phosphorylation confers transcriptional activities of c-Jun remains largely unknown.
One of the key mechanisms for regulating protein's activity is tight
control of its stability. Many regulatory proteins are selectively
degraded by the proteasome pathway at specific phases of cell growth.
Polyubiquitination, i.e. covalent attachment of multiple
ubiquitin residues to Central to JNK's association with c-Jun is the Constructs encoding
c-Junhis (15),
c-Junhis Histidine-fusion proteins were expressed in the BL21(D:E3)3pLysS
bacterial strain and purified by affinity chromatography using nickel
resins under denaturing conditions, as recommended by the manufacturer
(Qiagen). Proteins attached to the beads were refolded by excessive (20 volumes) column washings with mixtures of 8 M urea in
sodium phosphate buffer (pH 8.0) and renaturation buffer (Tris-HCl, pH
7.8, 150 mM NaCl, 1 mM EDTA, 1 mM
dithiothreitol, 10% EtOH, and 0.2% Nonidet P-40) at the subsequent
ratios of 3:1, 1:1, 1:3, and 1:7. The columns were then washed three
times with 20 volumes of renaturation buffer, followed by two
additional washes using the same buffer without alcohol. The beads were
then washed with 2 × storage buffer (40 mM HEPES, pH
7.6, 150 mM NaCl, 10 mM EDTA, 1 mM
dithiothreitol, 0.5 mM phenylmethylsulfonyl fluoride, and
0.2% Nonidet P-40) to block the remaining nonoccupied nickel binding
sites, which are not protected by bound proteins. Bead-bound proteins
were then resuspended in 50% glycerol and stored at HA-tagged ubiquitin (Ub-HA)-bound beads were washed three more times
(rather than resuspended in glycerol) with thrombin cleavage buffer (40 mM Tris-HCl, pH 8.5, 150 mM NaCl, 2.5 mM CaCl2) and incubated in 10 volumes of the
same buffer with thrombin (Sigma; 2 units/mg of recombinant protein)
for 16 h at 20 °C. Resins were pelleted, and the supernatant
containing Ub-HA was incubated at 90 °C for 15 min, chilled on ice,
and cleared by centrifugation at 15,000 × g for 20 min
at 4 °C. The resulting supernatant was concentrated and washed in
double distilled water using Ultra-free-15 centrifugation units (Sigma)
with 5000 cutoff membranes to obtain pure Ub-HA (verified by silver
staining of SDS-PAGE gel and immunoblotting with antibodies against
ubiquitin and HA).
4A-3T3 and NIH-3T3
mouse fibroblasts were grown in Dulbecco's modified Eagle's medium
supplemented with 10% calf serum (Life Technologies, Inc.) and
antibiotics at 37 °C and 5% CO2. Calpain inhibitor LLM
(Sigma) and proteasome inhibitor MG132 (Peptide International Co.) were
added to the cells at 50 and 10 µM (respectively) in
Me2SO (less than 0.1% of medium volume) 16 h before
harvesting. UV exposure (50 J/m2) or sham irradiation was
performed as described previously (16). Rabbit blood enriched with
reticulocytes was purchased (Pel-Freeze). Cell lysates and reticulocyte
lysates (RL) were prepared as described previously (16). Since RL were
found to contain trace amounts of JNK they were immunodepleted of JNK
prior to their use (16).
For JNK purification, 600 mg of protein extract from 4A-3T3 cells were
prepared from UV-irradiated 4A-3T3 cells (60 J/m2) 45 min
after the treatment and subjected to the purification procedure as
described previously (11). Briefly, the protein extract was loaded on a
sizing column (Sepharose 6B; Pharmacia Biotech Inc.) and active
fractions (measured in the solid phase kinase assay) (11) between 30 and 70 kDa were pooled, preincubated with glutathione
S-transferase-bound beads, and loaded on the glutathione
S-transferase-c-Jun (amino acids 5-89) affinity columns. After extensive washes with kinase buffer, the proteins were eluted with 3% n-octyl HA11
monoclonal antibodies were purchased (Babco) and used in immunoblotting
at 1:1000 dilution. Anti-c-Jun, anti-JunB, and anti-Elk1 polyclonal and
anti-ATF2 monoclonal antibodies were purchased (Santa Cruz
Biochemicals) and used in immunoblotting at 1:2000 dilution.
Anti-ubiquitin monoclonal antibodies, described elsewhere (20), were
used at 1:50 dilution. Anti-JNK monoclonal (clones 666 and 333)
antibodies were provided by Dr. C. Monel (PharMingen). The
immmunoblotting procedure was performed as described elsewhere
(16). For determination of c-Jun, JunB, and ATF2 co-precipitated with
JNK, 1.5 mg of NIH-3T3 lysates, precleared with protein G-bound beads
(Santa Cruz), were incubated with anti-JNK monoclonal (clone 333)
antibody. Material precipitated using protein G-beads was washed four
times in phosphate-buffered saline with 0.1% of Nonidet P-40, resolved
on 10% SDS-PAGE, and analyzed by means of immunoblotting with
respective antibodies (Santa Cruz).
Previously we established an
in vitro system for studying the ubiquitination of c-Jun
(16). In this system, after preincubation of recombinant c-Jun with
whole cell extract, the unbound proteins are washed off and the
targeting effects of c-Jun-bound proteins on its ubiquitination by
rabbit RL are monitored. The extent of ubiquitination is reflected by
the intensity of the multi-ubiquitin chain that appears as a smear of
ubiquitin immunoreactive material produced from the position of the
substrate to the top of the gel. Using this system, we demonstrated
that binding of cellular proteins from rat fibroblasts to recombinant
c-Jun increases its ubiquitination. Immunodepletion of JNK reduced the
targeting activity of protein extracts, which could be restored by
adding immunopurified JNK (16). However, in the absence of any
fibroblast proteins, the purified form of JNK was capable of mediating
only a marginal increase in c-Jun ubiquitination. The latter has been
attributed to low sensitivity of our detection system which relied on
antibodies to ubiquitin.
To improve the sensitivity of ubiquitination detection, we generated a
construct that allows expression and purification of Ub-HA. The
NH2-terminal fusion of HA peptide was shown not to interfere with formation of polyubiquitin chains in vivo
(15), and yet it enabled tracking ubiquitination of different
substrates with highly specific and sensitive anti-HA antibody.
Fifty micrograms of whole cell lysates from NIH-3T3 cells
(immunodepleted with normal rabbit serum or antibody against JNK as
described previously (16)) or 0.1 µg of purified JNK were incubated
on ice with bacterially expressed substrates (1-5 µg) bound to
nickel beads for 45 min. After extensive washes (four times with 1 ml
of kinase buffer) (16), the substrate-bound beads were equilibrated
with 1 × ubiquitination buffer (50 mM Tris-HCl, pH
8.0, 5 mM MgCl2, 0.5 mM
dithiothreitol, 2 mM NaF, and 3 mM okadaic
acid) and incubated in the same buffer supplemented with 2 mM ATP, 10 mM creatine phosphate, 0.02 unit of
creatine phosphokinase, 2 µg of Ub-HA, 1.5 mM ATP To analyze the association of JNK
with JunB and JunB Preincubation of c-Junhis with JNK purified
from 4A-3T3 mouse fibroblasts led to substantial increase in
c-Junhis ubiquitination by RL immunodepleted of JNK (Fig.
1; compare lanes 1 and
2). A further increase was noted when the whole cellular
extract, immunodepleted with normal rabbit serum, was added as a source
of targeting proteins (Fig. 1, lane 3). Immunodepletion of
whole cellular extract with antibody to JNK substantially decreased its
ability to target c-Junhis ubiquitination; adding purified
JNK to the JNK-depleted protein extract restored the original level of
c-Jun ubiquitination (Fig. 1). The addition of ubiquitin aldehyde to
the ubiquitination reaction did not change the pattern of results (data
not shown), suggesting that addition and removal of JNK affected the
conjugation of ubiquitin rather than isopeptidase activity. As negative
control nickel resins were incubated with protein lysates of uninduced bacterial strain BL21(D;E)3pLysS and purified, as c-Junhis
did not exhibit any HA-detectable smear, providing evidence of the substrate specificity of the reaction (Fig. 1, lane NTA).
The same results were observed when an immunoblot from a parallel experiment was probed with anti-ubiquitin monoclonal antibody (not
shown).
[View Larger Version of this Image (71K GIF file)]
Since the physical association between JNK and c-Jun targets the latter
for ubiquitination, their in vivo interaction is expected to
be unstable because of c-Jun degradation. To modulate the steady state
level of the c-Jun-JNK complex, mouse fibroblasts were pretreated with
potent proteasome inhibitor MG132 (20). Fig.
2A demonstrates that
pretreatment with MG132 substantially increased the amount of c-Jun
which could be co-immunoprecipitated with antibody against JNK. MG132
treatment did not affect the JNK level (Fig. 2B) but increased the amount of c-Jun measured in the whole cell extracts (Fig.
2A). These findings suggest that the c-Jun-JNK complex
in vivo is a target for proteasome activity. UV irradiation
of mouse fibroblast cells neither affected the JNK-c-Jun association
nor led to retardation of the electrophoretic mobility of c-Jun bound to JNK (Fig. 2A). These data provide further support for the
role of JNK as a targeting molecule in c-Jun ubiquitination and,
therefore, in determining its stability.
[View Larger Version of this Image (39K GIF file)]
In addition to its
ability to bind and phosphorylate c-Jun, JNK is known to associate with
JunB and ATF2 and to phosphorylate Elk1 and ATF2. We therefore examined
the possible involvement of JNK in the regulation of ATF2, Elk1, and
JunB ubiquitination. In all cases, the His-tagged substrates were used
in our in vitro ubiquitination assay. To study Elk-1
ubiquitination we used a bacterially expressed histidine-tagged Elk-1
protein, which was previously shown to be a functional sequence
specific DNA binding protein (17). As is evident from the data
presented in Fig. 3, Elk1 is efficiently
ubiquitinated by RL, even in the absence of targeting molecules.
Preincubation with either purified JNK or with whole cell lysate did
not alter the extent of ubiquitination (Fig. 3). These findings suggest
that Elk1, which is not capable of association with JNK (17), cannot be
targeted for ubiquitination by JNK (purified or in the content of the
cell lysate). The ability of RL to mediate a high degree of Elk1
ubiquitination suggests that RL provides all necessary components for
Elk1 ubiquitination, including enzymes of the ubiquitination machinery
and targeting molecule(s), which were not depleted by the antibodies to
JNK (16). As JNK phosphorylation of c-Jun protects it from subsequent targeting for ubiquitination (16, 22), we tested whether Elk1 phosphorylation affects its degree of ubiquitination. Unlike c-Jun, extensive phosphorylation of Elk1 by JNK (data not shown) did not alter
its ubiquitination (Fig. 3).
[View Larger Version of this Image (80K GIF file)]
JunB preserves a
[View Larger Version of this Image (61K GIF file)]
To further confirm JNK's role in targeting JunB ubiquitination, we
performed experiments using
JunBhis Transcription factor ATF2
can associate with JNK and is a substrate for JNK-mediated
phosphorylation. Surprisingly, preincubation of ATF2his
with JNK2 purified from 4A-3T3 cells did not target ubiquitination of
this recombinant protein (Fig.
5A, compare lanes 2 and 3). Addition of cell extract as a source of targeting
molecules led to a clear increase in the extent of ATF2 ubiquitination
(Fig. 5, lane 4). Immunodepletion of this protein
extract with antibody to JNK substantially decreased
ATF2his ubiquitination. Conversely, reconstituting this
protein extract with purified JNK restored the extent of ATF2
ubiquitination (Fig. 5, lanes 5 and 6).
[View Larger Version of this Image (33K GIF file)]
To further support the role of JNK in ATF2 ubiquitination, we performed
experiments using ATF2his Phosphorylation of ATF2his by JNK leads to a modest yet
highly reproducible increase in the extent of its basal ubiquitination (Fig. 5B, lane 1 versus 2). However, such
phosphorylation prevents an increase in the degree of
ATF2his ubiquitination by mouse fibroblast protein extracts
(compare lanes 3 and 4). Additional studies to confirm the protective effect of ATF2 phosphorylation by JNK in ATF2
ubiquitination utilized an ATF2 mutant in which JNK phosphorylation sites (Thr69 and Thr71) were replaced with Ala
residues. Phosphorylation of this mutant by JNK was not capable of
preventing whole cell extract-targeted ubiquitination (Fig.
5B; compare lanes 3 and 4 versus 7 and
8).
Treatment of mouse fibroblasts with
proteasome inhibitor MG132 (but not with calpain inhibitor LLM)
increased the amount of JunB co-immunoprecipitated with anti-JNK
antibody (Fig. 6A). Blocking the proteasome pathway did not alter the total amount of JunB, suggesting that only a small portion of JunB is bound to JNK and susceptible for JNK-targeted ubiquitination and proteasome-mediated degradation. We cannot rule out the possibility that
calcium-dependent proteases play a role in a JunB
degradation in the JNK-independent manner.
[View Larger Version of this Image (38K GIF file)]
Immunoblotting analysis of the same experiment with antibodies to ATF2
revealed multiple splicing variants of ATF2 and the cross-reactive ATFa
(Fig. 6B) which is also known to bind JNK (25) (Fig.
6B). While the amount of full-length ATF2 (molecular mass,
68 kDa) slightly increased after MG132 treatment, its association with
JNK was noticed only in the immunoprecipitates from MG132-treated cells
when the blot was overexposed (not shown). The 41.5-kDa splicing
version of mouse ATF2, which is a constitutively active transcription
factor (26), was sensitive to proteasome inhibition, especially when
complexed with JNK (Fig. 6B). These data demonstrate that
JNK-associated JunB and ATF2 are substrates for a proteasome pathway.
Post-translational modifications of preexisting transcription
factors play a central role in the immediate cellular response to
damage and stress. Members of the AP1 and ATF families are among the
stress-activated transcription factors that we studied in the present
investigation. Phosphorylation of c-Jun by JNK correlates with its
transactivation (27, 28), providing the mechanistic link between JNK
signaling and the induction of de novo expression of
stress-responsive genes. Since the transactivating potential of v-Jun,
which lacks the The data presented here, together with our previous results, suggest
that JNK actively participates in the regulation of c-Jun's stability
and, therefore, availability. In nonstressed cells, JNK functions as a
targeting molecule for ubiquitination, an activity which depends not on
the fact that it is a kinase, but on its ability to associate tightly
with c-Jun. This association attracts the enzymes of ubiquitination
machinery to c-Jun, thereby marking it for a
proteasome-dependent degradation. The necessity of JNK for
ubiquitination (and degradation) is directly supported by the data
presented here.
JNK regulates c-Jun ubiquitination depending on (i) JNK association
with c-Jun and (ii) c-Jun phosphorylation status. The fact that c-Jun
is protected from ubiquitination upon being phosphorylated by JNK (16,
22) prompted us to test the role of JNK in ubiquitination of its
associated substrate ATF2 (19), its nonassociated substrate Elk1 (17)
and associated yet non-substrate JunB (17, 23). JNK was incapable of
targeting the ubiquitination of Elk1 (Fig. 3). Moreover,
phosphorylation of Elk1 by JNK did not protect this transcription
factor from ubiquitination. These observations suggest that JNK
requires a physical association to regulate ubiquitination.
JNK participates in the targeting of JunB for ubiquitination through
its association with this protein (Fig. 4), albeit in a
non-phosphorylation-dependent manner since JunB is not
phosphorylated by JNK (17, 23). The JunB mutant, which lacks the
JNK binding domain (Fig. 4B) (23), is poorly ubiquitinated
(Fig. 4C). Interestingly, the inability to bind JNK was also
documented for another member of the Jun family, JunD (17, 23). JunD,
which does not have a JNK binding domain, is poorly ubiquitinated
compared with c-Jun (32). Together, these data strengthen JNK's role
in ubiquitination of its associated proteins.
ATF2 is another member of the bZIP transcription factor superfamily
which participates in the cellular response to stress/damage (19, 24,
33, 34). The ATF2-c-Jun heterodimers were shown to mediate
transactivation from the UV-responsive element (35) the motif which
regulates various stress-responsive genes (i.e. c-Jun,
ERCC3) (36). JNK-mediated phosphorylation of ATF2 at Thr69
and Thr71 has been shown to induce its transactivation
potential (19, 24, 33). As for c-Jun, the flanking hydrophobic domain
(amino acids 40-66) was found to interact with JNK and to facilitate ATF2 phosphorylation (19, 24). Here we demonstrate that although JNK
alone does not target ATF2 for ubiquitination, its presence in the
cellular lysate is required for such targeting (Fig. 5A). The ATF2 mutant, which lacks amino acids 40-66, cannot be targeted for
ubiquitination, possibly because of its lack of association with JNK.
Thus, JNK association with ATF2 is necessary but not sufficient for
targeting ATF2 ubiquitination. The additional required factors are yet
to be identified.
Phosphorylation of c-Jun by JNK was shown to facilitate the recruitment
of cyclic AMP response element-binding protein (37), which links cyclic
AMP response element-dependent transactivation by cyclic
AMP response element-binding protein with the transcription machinery
(37, 38). For ATF2, NH2-terminal phosphorylation is thought
to abrogate the self-inhibitory intramolecular interaction (39, 40).
Common to both proteins is likely to be the change in their
conformation due to phosphorylation, which would result in weaker
association with cellular adapters and/or ubiquitin machinery
enzymes.
Change in conformation would also coincide with greater stability of
these proteins, as shown for their In all, the emerging model from our studies suggests that JNK targeting
for ubiquitination requires tight interaction with its associated
protein. Phosphorylation of the associated protein decreases JNK
targeting capacity, as shown for c-Jun and ATF2, probably due to
altered conformation of the associated protein, which is likely to
affect this binding affinity. Ubiquitination of c-Jun, JunB, and ATF2
targeted by JNK is expected to play a central role in rendering
transcription factors such as these inactive through their rapid
degradation in nondamaged cells. We hypothesize that JNK targeting
ubiquitination of ATF2, which regulates the expression of c-Jun, as of
c-Jun itself, is a functionally important mechanism that maintains a
balanced expression of key regulatory proteins in normally
proliferating cells. The activation of these proteins via
phosphorylation and gained stability, in response to stress, has been
implicated as an early signal in apoptosis (10).
We thank Michael Karin and Dirk Bohmann for
providing plasmids and Craig Monel (PharMingen) for anti-JNK monoclonal
antibodies.
c-Jun NH2-terminal Kinases Target the Ubiquitination
of Their Associated Transcription Factors*
,
Department of Cell Biology
and Anatomy, New York Medical College, Valhalla, New York 10595, and
the § Howard Hughes Medical Institute, University of
Massachusetts Medical Center, Worcester, Masschusetts 01605
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES
-lysil amino groups of lysine, serves as a
marker for proteasome recognition (reviewed in Hochstrasser (12)). The
ubiquitination process is regulated by several mechanisms, including
degradation of inhibitors, processing of inactive precursors, and
stabilization of activated proteins. For example, activation of NF
B
requires the ubiquitination and degradation of its inhibitor I
B as
well as the processing of its precursor p105 (13). Conversely, it is
the DNA damaged-induced stabilization of the tumor suppressor protein
p53 that acquires its activities (14).
domain of c-Jun
(amino acids 30-57), which is deleted in its oncogenic counterpart v-Jun. The
domain is also essential for c-Jun ubiquitination, which
explains the mechanism underlying the greater stability of v-Jun as
compared with its cellular homologue (15). Using an in vitro
model system, we previously demonstrated that c-Jun is targeted for
ubiquitination by association with JNK. However, phosphorylation of
c-Jun on Ser73 by JNK is sufficient to protect c-Jun from
ubiquitination, resulting in a prolonged half-life (16). The dual
activity of JNK in targeting c-Jun ubiquitination via physical
association and in protecting it from entering this pathway via
phosphorylation points to the role of JNK in controlling c-Jun's
stability in cells exposed to environmental stress or inflammatory
cytokines. In light of finding phosphorylation-dependent
targeting of c-Jun ubiquitination, in the present study, we have
compared JNK target ubiquitination of its substrates and associated
protein (ATF2, c-Jun) with nonassociated substrate (Elk1) and
associated non-substrate (JunB). Our results provide the foundation for
the model in which (i) JNK-targeted ubiquitination requires tight
association and (ii) the degree of targeting is affected by the extent
of phosphorylation on JNK-associated protein.
Plasmids and Recombinant Proteins
1-72 (16) and
Elk1his (17) were previously described. JunB open reading
frame was amplified by PCR using the wild type JunB mammalian
expression vector (18) as a template and cloned into the pET15b vector (Novagen) at the NdeI site. A BamHI digest of the
same amplification product has been cloned into pET15b at the
BamHI site, providing the JunBhis construct,
which lacks the first 44 amino acids
(JunBhis
1-44). Full-length ATF2 as
well as ATF2 with mutated JNK phosphoacceptor sites Thr
Ala69 and Ala71 open reading frames were
amplified by PCR using pECE-ATF2 plasmids (4, 19) as templates followed
by unidirectionally cloning them into pET15b at
NdeI/BamHI sites, resulting in
ATF2his and ATF2his
69,71
constructs, respectively. The ATF2 mutant lacking JNK binding site
(ATF2his
40-66) has been created
using a QuickChange site-directed mutagenesis kit (Stratagene). An
HA-tagged ubiquitin encoding construct was generated by PCR-mediated
cloning. The sequence encoding ASYPYDVDPYASLSR followed by the second
codon of ubiquitin open reading frame was used as a 5
primer for PCR
amplification and cloned unidirectionally into pET15b at
NdeI/BamHI sites. Open reading frames of all
final constructs were verified by dideoxy sequencing (Sequenase kit, U. S. Biochemical Corp.).
20 °C.
-D-glucopyranoside (Sigma),
dialyzed against kinase buffer, and loaded onto a phenyl Sepharose
column (Pharmacia). The bound material was eluted with 0.2 M (NH4)2SO4 and
separated on a SuperX gel filtration column (Pharmacia). The middle
active fraction containing ~80% of JNK2 and 20% of JNK1 (revealed
by immunoblotting) was used in in vitro ubiquitination
assays (~0.1 µg/assay). The substrates were phosphorylated by means
of the purified JNK2 (20 ng/reaction) or active bacterially expressed JNK (Biomol; 400 ng/reaction) in the solid phase kinase reaction as
described elsewhere (16).
S
(Sigma) and 33% RL (v/v) in a total volume of 30 ml at 30 °C for 5 min. Ubiquitin-aldehyde, synthesized as described previously (21), was
added at 1 µM final concentration as indicated under
"Results." The reaction was stopped by adding 0.5 ml of 8 M urea in sodium phosphate buffer (pH 6.3) with 0.1% of
Nonidet P-40. The beads were washed three times with the stop-buffer
and once with phosphate-buffered saline supplemented with 0.5% of
Triton X-100, and the protein moiety was eluted with Laemmli sample
buffer at 100 °C. Samples were resolved on 8% SDS-PAGE and
electrotransferred onto a nitrocellulose filter. When anti-ubiquitin
antibody was used, a polyvinylidene difluoride membrane served as a
filter. Nitrocellulose filters were boiled in double distilled water
for 10 min, blocked with 5% nonfat milk, and probed with HA11
antibody. After their detection via chemiluminescence (ECL, Amersham
Corp.) the blots were stripped and reprobed with antibody against the
specific substrate, followed by alkaline phosphatase detection to
ensure equal loading of the substrate.
1-44, 250 µg of lysates obtained
from UV-irradiated 4A-3T3 cells were incubated with NTA bead-bound JunB
proteins for 45 min on ice. After four washes with kinase buffer,
proteins were eluted by boiling in Laemmli sample buffer, separated on
10% SDS-PAGE, and transferred onto a nitrocellulose filter. The filter
was probed with antibodies to JNK (clone 666, PharMingen) and reprobed
with polyclonal anti-JunB (Santa Cruz) antibody.
JNK Targeting of c-Jun Ubiquitination and
Stability
Fig. 1.
c-Jun ubiquitination in
vitro. Upper panel, recombinant c-Junhis
was subjected to an in vitro ubiquitination reaction as
indicated under "Materials and Methods." Components added to this
reaction are indicated. Whole cell extracts immunodepleted of JNK or
treated with nonimmune rabbit serum are designated WCE-JNK and WCE-NRS, respectively. Ubiquitination of the NTA beads
treated with uninduced bacterial lysate (which does not contain c-Jun) is reflected in the lane marked NTA. Immunoblot with
antibodies to HA is shown. The position of the ubiquitin conjugates is
marked on right lane. Lower panel, the blot was reprobed
with polyclonal antibody against c-Jun followed by alkaline phosphatase
detection. The position of c-Jun is indicated.
Fig. 2.
Effect of MG132 treatment on steady-state
level of c-Jun-JNK complexes in vivo. A, NIH-3T3
mouse fibroblasts were grown in Dulbecco's modified Eagle's medium
supplemented with calpain inhibitor LLM (50 µM) or
proteasome inhibitor MG132 (10 µM) for 15 h before
exposure to UV (50 J/m2; UV lane) or sham
irradiation (C lane). One hour after irradiation cells were
harvested and whole cell extracts (WCE) prepared. Whole cell
extracts (WCE) (1.5 mg) were incubated with anti-JNK
monoclonal antibody (clone 333). Precipitated material as well as 60 µg of WCE were analyzed by means of immunoblotting (WB)
with anti-c-Jun polyclonal antibody. B, for control
experiment parallel samples were analyzed by immunoblotting with
monoclonal anti-JNK antibody (clone 666). Positions of JNK1 (46 kDa)
and JNK2 (54 kDa) are indicated on the right.
Fig. 3.
Elk1 ubiquitination in vitro
performed as described for c-Jun (Fig. 1). Phosphorylation of
substrate was performed by active bacterially expressed JNK in solid
phase kinase reaction. WCE represents whole cell extract
added for targeting ubiquitination. Upper panel, anti-HA
blot, Position of the ubiquitin conjugates is marked on the
right; lower panel, anti-Elk1 blot.
domain-like sequence within its NH2 terminus, thus enabling
JNK binding (17, 23). Basal levels of JunBhis ubiquitination by RL were higher than those found with c-Jun (data not
shown). As in the instance of c-Jun, preincubation with JNK or with
whole cellular extract increased the extent of JunBhis ubiquitination (Fig. 4A,
compare lanes 1-3). Whole cell extract immunodepleted of
JNK mediated the decreased extent of JunBhis ubiquitination, whereas addition of a purified form of JNK to these
extracts restored the original degree of ubiquitination (Fig.
4A, lanes 4 and 5).
Fig. 4.
A, JunB ubiquitination in
vitro performed as described for c-Jun (Fig. 1). Whole cell
lysates immunodepleted of JNK or treated with nonimmune rabbit serum
are designated WCE-JNK and WCE-NRS, respectively.
Upper panel, anti-HA blot. Position of ubiquitin conjugates
is marked on the right; lower panel, anti-JunB
blot. B, JunB-JNK association in vitro. To
analyze the JNK association with JunB and JunB
1-44 (the
mutant lacking first 44 amino acids), 250 µg of lysates obtained from
UV-irradiated 3T3 cells were incubated with bacterially expressed JunB
proteins attached to NTA beads on ice for 45 min. After four washes
with kinase buffer, proteins were eluted by boiling in Laemmli sample
buffer, separated on 10% SDS-PAGE, and transferred onto a
nitrocellulose filter. Filter was probed with anti-JNK (upper
panel) and reprobed with polyclonal anti-JunB antibody
(lower panel). NTA represents control binding of NTA beads
treated with uninduced bacterial lysates instead of those containing
isopropyl-1-thio-
-D-galactopyranoside-induced JunB and/or JunB
1-44. C, JunB
1-44
ubiquitination in vitro was performed as described in
A. Upper panel, anti-HA blot; lower panel,
anti-JunB blot.
1-44, which lacks the first
44 amino acids. This mutant lacks the ability to associate with JNK as
suggested by available data (23) and evidenced by an in
vitro binding assay (Fig. 4B). Ubiquitination of
JunBhis
1-44 was severely impaired.
Neither JNK nor cell extract could increase JunBhis
1-44 ubiquitination (Fig.
4C). Although JNK binds JunB, it cannot phosphorylate this
transcription factor because of the absence of phosphoacceptor sites
(17, 23). Indeed, preincubation of JunB with JNK and ATP in a solid
phase kinase reaction followed by JNK removal (with 3%
n-octyl
-D-glucopyranoside as described previously (16)) did not result in incorporation of
[32P]phosphate into JunB nor did it yield any protection
from subsequent ubiquitination (data not shown).
Fig. 5.
A, ATF2 ubiquitination in
vitro, effect of JNK binding. The experiment was performed as
described for c-Jun (Fig. 1). Components added to this reaction are
indicated. Whole cell lysates immunodepleted of JNK or treated with
nonimmune normal rabbit serum are designated WCE-JNK and
WCE-NRS, respectively. Ubiquitination of NTA beads treated
with uninduced bacterial lysate (which does not contain ATF2 or mutant
lacking anino acids 40-66; ATF2
40-66) is reflected in
lane marked NTA. Upper panel, anti-HA blot. Position of
ubiquitin conjugates is marked on the right; lower panel, anti-ATF2 blot. B, ATF2 ubiquitination in
vitro, effect of phosphorylation by JNK. The experiment was
performed as described for c-Jun (Fig. 1). Phosphorylation of substrate
was performed by active bacterially expressed JNK in solid phase kinase
reaction. ATF2 with mutated JNK phosphoacceptor sites Thr
Ala69 and Ala71 is designated
ATF269,71. Upper panel, anti-HA blot. The
position of ubiquitin conjugates is marked on the right;
lower panel, anti-ATF2 blot.
40-60,
which cannot bind JNK (19, 24). Although
ATF2his
40-60 exhibits some basal
ubiquitination by RL, it cannot be increased by whole cell extract
(Fig. A, lanes 7 and 8).
Fig. 6.
Effect of MG132 treatment on steady-state
level of JunB-JNK and ATF2-JNK complexes in vivo.
A, cells were treated and JNK was immunoprecipitated as described
in the legend to Fig. 2. An immunoblot with anti-JunB polyclonal
antibody is shown. B, the same blot has been stripped and
reprobed with ATF2 monoclonal antibody. The position of full-length (68 kDa) and the constitutively active spliced form (41.5 kDa) of ATF2 are
indicated by arrows. Ig points to the position of the heavy
chain of immunoglobulins.
domain, seems to be independent of phosphorylation
(29, 30), it may be attributed to the increased stability that is due
to its lack of JNK association and targeted ubiquitination (15, 16).
That association of JNK with c-Jun via the
domain
impairs this protein's ability to undergo transactivation in
nonstressed cells, which has been previously proposed and is consistent
with our model (31).
domain-deleted counterparts. The
activity of various proteins is often limited by their availability, as
shown for another JNK-associated protein, p53 (41). We suggest that
stabilization of c-Jun and ATF2 through their protection from
ubiquitination by JNK-mediated phosphorylation provides an important
mechanism for their activation.
*
This work was supported by National Institutes of Health
Grant CA-59908 (to Z. R.).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
¶
To whom correspondence should be addressed: Ruttenberg Cancer
Center, One Gustave L. Levy Place, Box 1130, New York, NY 10029. Tel.:
212-824-8193; Fax: 212-849-2446; E-mail:
zeev_ronai{at}smtplink.mssm.edu.
1
The abbreviations used are: ATF2, activating
transcription factor 2; JNK, c-Jun NH2-terminal kinase;
PCR, polymerase chain reaction; Ub-HA, hemagglutinin-tagged ubiquitin;
PAGE, polyacrylamide gel electrophoresis; RL, reticulocyte lysate; HA,
hemagglutinin; ATP
S, adenosine 5
-O-(thiotriphosphate;
NTA, nitrilotriacetic acid.
2
V. Adler, S. Y. Fuchs, M. R. Pincus,
K. D. Tew, R. J. Davis, and Z. Ronai, manuscript submitted
for publication.
Volume 272, Number 51,
Issue of December 19, 1997
pp. 32163-32168
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.
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