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Volume 272, Number 51, Issue of December 19, 1997 pp. 32308-32314

Multisite Phosphorylation and the Nuclear Localization of Phosphatase Inhibitor 2-Green Fluorescent Protein Fusion Protein during S Phase of the Cell Growth Cycle*

(Received for publication, August 19, 1997, and in revised form, October 2, 1997)

Yasutaka Kakinoki , Jeremy Somers Dagger and David L. Brautigan §

From the Center for Cell Signaling, University of Virginia Health Sciences Center, Charlottesville, Virginia 22908

ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
REFERENCES


ABSTRACT

Human phosphatase inhibitor 2 (Inh2) is a phosphoprotein that complexes with type 1 protein phosphatase, and its expression peaks during S phase and mitosis during the cell cycle. Localization of Inh2 was visualized in HS68 human fibroblasts by fusing Inh2 to green fluorescent protein (GFP). During G1 phase, Inh2-GFP was localized in the cytoplasm, and as cells progressed into S phase Inh2-GFP accumulated in the nucleus. Known phosphorylation sites of Inh2 at Thr-72, Ser-86, and Ser-120/121 were each replaced with alanine. None of the mutated Inh2-GFP proteins accumulated in the nucleus during S phase, indicating that all of these phosphorylation sites were required. Mutation of two lysine residues in a putative nuclear localization sequence in Inh2 also prevented the Inh2-GFP fusion protein from accumulating in the nucleus during S phase. Recombinant Inh2 was phosphorylated by kinases in cytosols prepared from G1 and S phase cells. The amount of Inh2 kinase attributed to casein kinase 2, based on inhibition by heparin, increased 2.6-fold from G1 to S phase. In addition, kinases in G1 versus S phase cytosols produced distinct Inh2 phosphopeptides. The results indicate that changes in phosphorylation of Inh2 are involved in intracellular redistribution of the protein during the cell cycle.


INTRODUCTION

Human phosphatase inhibitor-2 (Inh2)1 is a 23-kDa heat-stable protein first identified as a phosphatase inhibitor protein in rabbit skeletal muscle (1). Rabbit Inh2 was purified to homogeneity, (2, 3) and the amino acid sequence was determined as 204 residues (4). The cDNA sequences of rabbit skeletal muscle Inh2 (5, 6), rabbit liver Inh2 (5), and human Inh2 (7) have been determined. These amino acid sequences are over 90% identical. The GLC8 gene in Saccharomyces cerevisiae encodes a protein with some similarity to Inh2, but only 25% of the amino acid sequence is identical (8-10).

Inh2 forms a stable heterodimer with the catalytic subunit of type 1 protein phosphatase (PP1) (11-15) that has been called MgATP-dependent phosphatase. It is activated by reaction with glycogen synthase kinase 3 in the presence of MgATP (12, 16-19), which produces a transient phosphorylation of Thr-72 in Inh2. Both cyclin B-cdc2 (20) and mitogen-activated protein kinase (21) can also phosphorylate Thr-72 of Inh2 in biochemical assays. The phosphorylation sites found by protein sequencing were Ser-86, Ser-120, and Ser-121, all phosphorylated by casein kinase 2 (CK2) (22). Prior phosphorylation of Inh2 by CK2 enhances phosphorylation by glycogen synthase kinase 3 (5, 12). Inh2 also can be phosphorylated on a tyrosine residue by purified insulin receptor, with loss of its inhibitory activity toward PP1 (23). Phosphoamino acid analysis of Inh2 from mouse diaphragm (24) and rat fat cells (25) showed predominantly phosphoserine and only trace amounts of phosphothreonine.

The function of Inh2 and the role of its phosphorylation in living cells remains unsettled. One proposal is that MgATP-dependent phosphatase is a significant cytoplasmic form of PP1. Results using PP1 expressed in bacteria led to another proposal that Inh2 functions as a molecular "chaperone" for folding newly synthesized PP1 into a biologically active conformation (26, 27). On the other hand, the amount of Inh2 protein and heat-stable inhibitory activity against PP1 were found to oscillate during the cell cycle in rat embryo fibroblasts, peaking during S phase and mitosis (28, 29), suggesting a possible role for Inh2 in the cell division cycle. A similar cell cycle-dependent change in the amount of the yeast GLC8 protein has been reported (8).

The green fluorescent protein (GFP) of jellyfish Aequorea victoria (30, 31) has emerged as a unique tool for examining intracellular phenomena in living cells. Because GFP possesses an intrinsic fluorescence that does not require other cofactors and because the S65T mutant of GFP shows an enhanced brightness compared with the wild type protein, fusion proteins with GFPS65T provide a powerful system to analyze protein expression and distribution in living cells (32-34). In the present study, we used a Inh2-GFP fusion protein to examine intracellular localization of Inh2 during G1 and S phases of the cell cycle.


MATERIALS AND METHODS

Cell Culture

Human foreskin fibroblasts (HS68 cells) and SV40-transformed African green monkey kidney cells (COS-7) were obtained from ATCC and cultured in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal calf serum (FCS) plus 2 mM glutamine. Cell growth was synchronized in serum-free DMEM for 36-48 h, followed by addition of 10% FCS. Addition of 1-2 mM hydroxyurea was used to arrest cells near G1/S. For fluorescence microscopy to detect GFP protein, cells were cultured in phenol red-free DMEM.

Analysis of Growth Synchronization

HS68 cells were seeded at a density of 1.5 × 104 cells/35-mm dish. To monitor the induction of DNA synthesis [methyl-3H]thymidine (Amersham Corp.) was added in pulses of 1 µCi/2 ml of medium for 4 h. At the indicated time points, cells were released from the dish with 200 µl of 0.25% trypsin, 0.02% EDTA and treated with 500 µl of 1% Triton X-100 followed by addition of 700 µl of 10% trichloracetic acid. The precipitate was collected by vacuum filtration on GF/C filters and washed with 5% TCA. The [3H]thymidine in DNA was quantified by liquid scintillation counting.

Distribution of cells in S phase was analyzed by fluorescence-activated cell sorting with ModFit software (Verity Software) using a Power Mac 7600. Cells were pelleted by centrifugation (200 × g for 5 min) and resuspended in 600 µl of propidium iodide solution containing 0.1% sodium citrate, 0.3% Nonidet P-40, 100 µg of RNase A/ml, and 50 µg of propidium iodide/ml and then subjected to FACScan analysis (Becton Dickinson).

We analyzed whether transfected cells expressing GFP proteins entered S phase at the same time as non-transfected cells. Cells growing on a 100-mm dish were transfected and then synchronized in S phase by hydroxyurea block/release. Cells were sorted by FACS Vantage (Becton Dickinson) based on sorting gates set up around GFP-positive and GFP-negative populations; these gates were based on S65TGFP fluorescence (excitation, 488 nm; emission, 530 nm). GFP-positive cells were recovered (purity, >95%) and then subjected to analysis using propidium iodide staining.

Plasmid Constructs

Vector pNAssCMVGFPS65T was constructed from pNAssCMV (35) (the cDNA encoding GFPS65T was linked downstream of the CMV promoter) and was kindly provided by Dr. Richard Day (University of Virginia). Human Inh2 cDNA was generated using reverse transcription-polymerase chain reaction, in which total RNA was extracted from HS68 cells using the acid-guanidinium thiocyanate-phenol-chloroform extraction method (36). Primers used for polymerase chain reaction contained EcoRI sites 5'-CGAATTCCAATGGCGGCC TCGACGG-3' and 5'-TTGAATTCCTGTTGGTCACTTGGAG-3', creating a human Inh2 cDNA fragment lacking the C-terminal seven amino acids. To make a Inh2-GFPS65T fusion gene, the Inh2 cDNA fragment was cloned into EcoRI sites in the pNAssCMVGFPS65T vector, which directs a synthesis of the fusion protein, tagged with GFPS65T at the C terminus of Inh2. The four Inh2 mutants, T72A, S86A, S120/121A, and K143/145A, were generated by megaprimer polymerase chain reaction (37, 38) and cloned into EcoRI sites in the pNAssCMVGFPS65T vector.

To generate FLAG-tagged Inh2 containing the DYKDDDDK epitope, the Inh2 cDNA fragment was cloned into the EcoRI site of FLAG-fused pcDNA3 vector (Invitrogen) to create a fusion protein tagged with FLAG at the N terminus of Inh2. To make FLAG-Inh2-GFP, the GFPS65T insert with SV40poly(A) was excised from pNAssCMVGFPS65T by digestion with EcoRI and XbaI and then cloned into EcoRI and XbaI sites of FLAG-fused pcDNA3 vector. Inh2 cDNA was inserted into the EcoRI site between FLAG and GFPS65T, creating the FLAG-Inh2-GFP fusion gene. All plasmid constructs were confirmed by dideoxy sequencing (39).

Microscopic Analyses of Cells Expressing GFP Fusion Proteins

Expression vectors encoding the Inh2-GFPS65T fusion proteins were transfected into HS68 cells using liposome-mediated gene transfer carried out according to instructions for the LipofectACE product (Life Technologies, Inc.). Cells (5 × 103) were grown on a 1.5-mm-thick coverglass (18 × 18 mm) in 35-mm culture dishes and maintained for 36-40 h with 2 ml of phenol red-free and serum-free DMEM to arrest growth. Quiescent cells were treated with 2-5 µg of plasmid DNA in 30 µl of liposome reagent and then cultured in a 5% CO2 incubator at 37 °C for 6-8 h. After incubation, cells were washed with PBS, the medium was replaced with phenol red-free DMEM containing 10% FCS, and then living cells were examined at the indicated times using a Nikon Microphot-FXA/SA fluorescence microscope with a fluorescein filter (Chroma).

Nuclear accumulation of GFP fusion proteins was assayed by counting and scoring all of the fluorescent green cells on the coverglass, typically about 80-100 cells out of 5 × 103. Cells with higher fluorescence intensity in the nucleus compared with the cytoplasm were scored as positive. Cells with higher intensity in the cytoplasm were scored as negative. The fraction of positive cells of the total green fluorescent cells was defined as the nuclear/cytoplasmic index (N/C index). The results were replicated in 5-6 independent experiments, and the data were used to produce mean ± S.D. values that are plotted in the figures. Photographs of individual cells (Fig. 1C) were taken with Kodak Ektachrome 400 color slide film through an oil immersion × 60 objective lens. The slides were scanned by a Nikon LS-3510AF scanner and processed through Adobe Photoshop, version 3.0.

Analysis of Inh2 Phosphorylation in Cells

Transient expression of FLAG-Inh2 or FLAG-Inh2-GFP fusion proteins in COS-7 cells (2-5 × 106) used transfection in 100-mm dishes with lipofection (5-8 µg of pcDNA3 plasmid). Cells were grown in DMEM supplemented with 10% FCS, incubated with 2 mM hydroxyurea for 20 h, and released from hydroxyurea; 2.5 h later, cells were radiolabeled with 0.5 mCi/ml of [32P]orthophosphate (NEN Life Science Products) for 1 h at 37 °C in phosphate-free DMEM supplemented with 10% FCS that had been dialyzed against 0.8% NaCl. Cells were washed with PBS, trypsinized from the dish, and collected by centrifugation. The cell pellet was resuspended in 1 ml of cell lysis buffer (10 mM Tris-HCl, pH 7.8, 0.15 M NaCl, 5 mM EDTA, 5 mM EGTA, 1% Nonidet P-40, 1 mM DTT, 1 mM sodium orthovanadate, 1 µM microcystin Leu-Arg, 20 mM sodium pyrophosphate, 1 mM phenylmethylsulfonyl fluoride, 10 µg/ml aprotinin, 0.3 mg/ml benzamidine, and 10 µg/ml lima bean trypsin inhibitor) and then kept at 4 °C for 45 min. After the lysate was centrifuged at 13,000 × g for 10 min, the supernatant was used as cell extract. Fusion proteins were immunoprecipitated with anti-FLAG M2 affinity gel (Eastman Kodak Co.). After resolution of the immunoprecipitates by SDS-PAGE (10% gel), the proteins were transferred to Immobilon P membrane (Millipore). The phosphorylated FLAG-Inh2 and FLAG-Inh2-GFP fusion proteins were detected by autoradiography. Western blotting was performed using anti-FLAG M2 monoclonal antibody, followed by the use of the RenaissanceTM detection system (NEN Life Science Products).

Phosphorylation and Peptide Mapping of Recombinant Inh2

Recombinant rabbit Inh2 (rInh2) was expressed in bacteria and purified to homogeneity (40). Samples of 2 µg of rInh2 were incubated for 30-60 min at 30 °C in 60 µl of cytosol prepared from HS68 cells (5 µg of protein), which was made in buffer including 50 mM Hepes, pH 7.5, 10 µg/ml aprotinin, 10 µg/ml leupeptin, 10 mM MgCl2, 10 mM beta -glycerophosphate, 1 µM microcystin LR, 1 mM sodium orthovanadate, 1 mM DTT, and 1 mM phenylmethylsulfonyl fluoride using mechanical disruption generated by a Dounce homogenizer. Phosphorylation reaction was performed in the presence of 5 µCi of [gamma 32P]ATP, 200 µM ATP, and 10 mM MgCl2. After phosphorylation, the reaction mixture was analyzed by SDS-PAGE followed by autoradiography. For two-dimensional phosphopeptide mapping, the corresponding bands were excised and digested with trypsin (0.2 mg/ml) overnight at 30 °C, and then the tryptic phosphopeptides were loaded onto thin layer cellulose plates (Selecto Scientific flexible TLC plate) and resolved first by electrophoresis in a pH 1.9 buffer and then by ascending chromatography in an isobutyric acid solvent (41).


RESULTS

Intracellular Localization of Inh2-GFP during G1 and S Phase

The intracellular localization of a Inh2-GFP fusion protein was examined in HS68 cells made quiescent by serum deprivation for 36-48 h and then stimulated into synchronous growth by serum refeeding. To define the time of S phase, cells were pulse-labeled for 4-h intervals with [3H]thymidine. Fig. 1A shows a sharp peak of DNA synthesis at 21 h. As an alternative method for synchronization of cell growth, we used hydroxyurea to block cells near G1/S. After washout of hydroxyurea, incorporation of [3H]thymidine could be detected as early as 30 min, and it reached a peak at 2 h (Fig. 2A). At the peak of S phase, more than 70% of the cells were immunostained for incorporation of bromodeoxyuridine using either method of synchronization (data not shown). The results of both analyses were consistent and established two alternative methods for the synchronization of HS68 cells in S phase.


Fig. 1. Cell cycle changes in localization of Inh2-GFP fusion protein in HS68 cells. A, [3H]Thymidine incorporation was determined as described under "Materials and Methods" using cells synchronized by serum starvation. Cells were pulse-labeled with [3H]thymidine for 4 h, and each data point indicates the middle of the pulse-labeled period. Experiments were performed in triplicate, and data are shown as mean ± S.D. B, nuclear accumulation of Inh2-GFP. Cells were synchronized and then transfected to express either GFP alone (open circles) or Inh2-GFP (closed circles). The nuclear accumulation of GFP was examined by fluorescence microscopy and cells scored for N/C index as described under "Materials and Methods." The mean ± S.D. is shown for five independent experiments involving a total of 400 green fluorescent cells. C, the GFP fluorescence of selected living cells was detected at × 600 magnification as described under "Materials and Methods." a, a cell in G1 phase expressing Inh2-GFP mostly in the cytoplasm; b, a cell in S phase in which accumulation of Inh2-GFP in nucleus is evident; c, a cell expressing GFP itself, with uniform distribution that appeared the same in G1 phase or S phase.

[View Larger Version of this Image (22K GIF file)]



Fig. 2. Nuclear localization of Inh2-GFP fusion protein after release from hydroxyurea block. A, [3H]thymidine incorporation was determined as described under "Materials and Methods." HS68 cells were synchronized by serum starvation and then grown in the presence of serum plus 1 mM hydroxyurea to prevent S phase entry. Cells were washed three times to remove hydroxyurea and pulse-labeled with [3H]thymidine for 1 h. Experiments were performed in triplicate, and data are shown as mean ± S.D. B, nuclear accumulation of Inh2-GFP. Cells grown on coverglass were synchronized as in A and transfected to express either GFP alone (open circles) or Inh2-GFP (closed circles). After release from hydroxyurea block, cells were examined using fluorescence microscopy and scored for N/C index as described under "Materials and Methods." The mean ± S.D. is shown for five independent experiments involving a total of 400 green fluorescent cells.

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GFP fluorescence was detected in approximately 5% of cells transfected with an Inh2-GFP expression vector. Transfection efficiency for HS68 cells was limited by the serum starvation protocol used to provide synchronous growth of the cells. After various trials, it was found that transfection was best done during the time period just prior to readdition of serum. After serum stimulation, Inh2-GFP protein was predominantly cytosolic up to 12 h, corresponding to the G1 phase of growth (Fig. 1C, panel a). However, Inh2-GFP protein accumulated in the nucleus as these cells progressed from G1 to S phase (Fig. 1C, panel b). At 21 h, when 70% of the cells were in S phase as shown by bromodeoxyuridine staining, nuclear translocation-positive cells reached 68 ± 15%, expressed as a N/C index of 0.68 (Fig. 1B, closed circles). Most of the cells transfected with GFP alone as a control exhibited green fluorescence uniformly throughout the cell (Fig. 1C, panel c), and these cells had a low N/C index during S phase (Fig. 1B, open circles).

In separate experiments, at 2.5 h after hydroxyurea release (that is, during S phase (Fig. 2A)), Inh2-GFP protein accumulated in the nucleus, again expressed as a N/C index > 0.6 (Fig. 2B, closed circles), whereas control cells expressing GFP itself did not show accumulation of GFP in the nucleus (Fig. 2B, open circles). The results show that the Inh2-GFP protein was predominantly cytoplasmic during G1 phase and that it accumulated in the nucleus during S phase. Both methods for synchronization of cell growth gave the same percentage of green fluorescent cells exhibiting nuclear localization of the Inh2-GFP fusion protein (N/C index), and this agreed exactly with the percentage of cells in the entire culture that were positive for bromodeoxyuridine staining.

As an additional control experiment, we examined whether transient expression of Inh2-GFP or GFP itself affected entry into S phase. FACScan analysis by propidium iodide staining showed the distribution of mock-transfected cells (Fig. 3A) during hydroxyurea blockade (broken line) and 2.5 h after release by washout (solid line). For this analysis, cells expressing GFP (Fig. 3B) or Inh2-GFP (Fig. 3C) were sorted by GFP fluorescence and then analyzed by propidium iodide staining. The results demonstrate that expression of Inh2-GFP or GFP itself did not affect cell cycle progression into S phase after hydroxyurea blockade.


Fig. 3. Expression of Inh2-GFP does not alter cell cycle progression. COS-7 cells expressing either GFP itself or Inh2-GFP were analyzed using FACScan. Cells were transfected and growth arrested by addition of 2 mM hydroxyurea to the medium for 20 h. Cells were collected, sorted based on GFP fluorescence as described under "Materials and Methods," and then analyzed using propidium iodide staining. The following populations of cells were compared: A, mock-transfected cells, blocked with hydroxyurea (broken line) and 2 h after washout of hydroxyurea (solid line); B, cells expressing GFP itself, 2 h after hydroxyurea washout; C, cells expressing Inh2-GFP, 2 h after hydroxyurea washout. The abscissa shows relative DNA content, and the ordinate shows the number of cells. Expression of GFP or Inh2-GFP did not affect entry into S phase following arrest with hydroxyurea.

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Mutations to Define Requirements for Nuclear Accumulation of Inh2 during S Phase

The known phosphorylation sites in Inh2 were mutated to alanines using megaprimer polymerase chain reaction, creating T72A-Inh2, S86A-Inh2, and S120A/121A-Inh2, which were expressed as GFP fusion proteins in HS68 cells. In contrast to the wild type Inh2-GFP (Fig. 4, column 2), none of the point mutants accumulated in the nucleus during S phase (Fig. 4, columns 3-5). The N/C index <0.2 was the same as that for GFP itself (Fig. 4, column 1). The total number of green fluorescent cells was the same for GFP, for mutated Inh2-GFP, and for wild type Inh2-GFP, and the results were replicated in three to five independent experiments. Thus, mutation of any one of the known phosphorylation sites in Inh2 altered localization of the Inh2-GFP fusion protein in living cells during S phase.


Fig. 4. Effects of mutations on intracellular distribution of Inh2-GFP fusion proteins. HS68 cells grown on a coverglass were transfected with plasmids encoding wild type or mutated Inh2-GFP fusion proteins and then synchronized with hydroxyurea as described in the legend to Fig. 2. The living cells were examined using a fluorescence microscope 2.5 h after washout of hydroxyurea. The results are shown as the mean ± S.D. (n = 5) of the N/C index defined under "Materials and Methods." Schematic representation of the Inh2-GFP constructs is shown under the graph. The position of mutations of the Inh2-GFP fusion proteins is given as one-letter code in the box. Numbers in the lower panel correspond to column numbers in the upper panel.

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Inh2 has two clusters of basic amino acid residues within the sequence 134-147 (REKKRQFEMKRKLH. The lysine residues at positions 143 and 145 were mutated to alanines, giving a K143A/K145A mutant of Inh2 (Inh2-KK/AA). rInh2 with lysines 143 and 145 mutated to non-basic amino acids had inhibitory specific activity toward PP1 that was identical to the wild type Inh2 protein (data not shown). Inh2-KK/AA-GFP fusion protein expressed in HS68 cells did not become concentrated within the nucleus; instead, it localized predominantly in the cytoplasm during both G1 and S phases (Fig. 4, column 6). There was no difference in the number of cells expressing Inh2-KK/AA-GFP, wild type Inh2-GFP, or GFP itself. Mutation of lysines at positions 143 and 145 was like mutation of phosphorylation sites in Inh2; i.e. it prevented nuclear localization of the Inh2-GFP fusion protein in living cells during S phase.

Phosphorylation of Inh2 and Inh2-GFP in Living Cells

Inh2 is phosphorylated by multiple protein kinases, providing a potential mechanism for regulating its localization. Antibodies against Inh2 or GFP were not effective at immunoprecipitation in our hands, preventing analysis of phosphorylation by direct recovery of endogenous Inh2 or transiently expressed Inh2-GFP. As an alternative, to produce enough protein for analysis of phosphorylation, COS-7 cells were transfected with plasmids encoding epitope-tagged FLAG-GFP, FLAG-Inh2, or FLAG-Inh2-GFP. Cells were synchronized into S phase by hydroxyurea block/release and metabolically labeled with 32P. As shown in Fig. 5A, FLAG-Inh2-GFP (lane 1), FLAG-GFP (lane 2), and FLAG-Inh2 (lane 3) were immunoprecipitated as 70-, 31-, and 41-kDa proteins, respectively, based on anti-FLAG immunoblotting. Both FLAG-Inh2-GFP and FLAG-Inh2 proteins were 32P-labeled (Fig. 5B, lanes 1 and 3), whereas the FLAG-GFP protein was not. FLAG-Inh2-GFP and FLAG-Inh2 were phosphorylated to approximately the same specific radioactivity (FLAG-Inh2-GFP/FLAG-Inh2 = 0.8), calculated by densitometry. We concluded that the sites in the Inh2 portion, not in the GFP portion, of the fusion protein were phosphorylated in living cells. Presumably, the same sites were phosphorylated in FLAG-Inh2-GFP and FLAG-Inh2. Acid hydrolysis and phosphoamino acid analysis revealed only 32P-labeled Ser in these proteins (data not shown).


Fig. 5. In vivo phosphorylation of Inh2-GFP fusion proteins during S phase. COS-7 cells were transfected and synchronized as described in the legend to Fig. 3. Cells were labeled with [32P]orthophosphate for 1 h as described under "Materials and Methods." Cell extracts were prepared and immunoprecipitated with anti-FLAG M2 antibody. Proteins were separated by SDS-PAGE and transferred to the filter. Lane 1, FLAG-Inh2-GFP; lane 2, FLAG-GFP; lane 3, FLAG-Inh2. A, immunoblotting using anti-FLAG M2 monoclonal antibody.

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Phosphorylation of Thr-72 in Inh2 in Living Cells during S Phase

To provide evidence that Thr-72, which was required for nuclear accumulation during S phase (Fig. 4), was phosphorylated in living cells, COS-7 cells were transfected with plasmids for FLAG-Inh2, FLAG-T72A-Inh2, FLAG-S86A·S120A·S121A-Inh2 (triple mutant), and FLAG-T72A·S86A·S120A·S121A-Inh2 (quadruple mutant). Cells were synchronized into S phase and metabolically labeled with 32PO4 as described above. Immunoprecipitates from these cells using anti-FLAG M2 antibody were subjected to SDS-PAGE, Coomassie Blue staining, and autoradiography. As shown in Fig. 6A, FLAG-Inh2 and FLAG-T72A-Inh2 were robustly phosphorylated (lanes 2 and 3). In comparison, the triple mutant FLAG-S86A·S120A·S121A-Inh2 was also 32P-labeled, but at a much lower level (lane 4). The quadruple mutant FLAG-T72A·S86A·S120A·S121A-Inh2 had 32P labeling even lower than that of the triple mutant FLAG-S86A·S120A·S121A-Inh2. This difference in 32P labeling between the triple and quadruple mutant proteins was attributed to phosphorylation of T72. Interestingly, even the quadruple mutant Inh2 was radiolabeled (Fig. 6A, lane 5), showing that there are other sites in Inh2 phosphorylated in these cells. Coomassie Blue staining was used to measure the recovery of various FLAG-Inh2 proteins (Fig. 6B). Although the same amount of antibody was used for each sample, as seen from staining for the heavy chain at the top of each lane, there were different amounts of FLAG-Inh2 recovered in each sample. In the Coomassie-stained gel, differences in electrophoretic mobility of the various Inh2 proteins were evident. The single mutation of T72 resulted in increase in mobility relative to wild type (Fig. 6B, lane 2 versus lane 3). The triple and quadruple mutants migrated in the same way (Fig. 6B, lanes 4 and 5), and this was different from the wild type and T72A forms of Inh2. The mobility in SDS-PAGE is another indication of phosphorylation of these sites in Inh2. The results are further evidence for multisite phosphorylation of Inh2 at T72, S86, S120, and S121 in living cells during S phase.


Fig. 6. In vivo phosphorylation of wild type and mutated Inh2 proteins during S phase. A, phosphorylation of wild type and mutated FLAG-Inh2 proteins was performed in COS-7 cells labeled with [32P]orthophosphate for 1 h in phosphate-free DMEM plus 10% dialyzed FCS. Anti-FLAG M2 immunoprecipitates were separated by SDS-PAGE and transferred to the filter. Lane 1, FLAG alone; lane 2, FLAG-Inh2; lane 3, FLAG-T72A-Inh2; lane 4, FLAG-S86A·S120A·S121A-Inh2; lane 5, FLAG-T72A·S86A·S120A·S121A-Inh2.

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Differential Phosphorylation of Recombinant Inh2 by Kinases in the Cytosols from G1 and S Phase Cells

Inh2 kinase activity in cytosols prepared from G1 versus S phase cells was assayed with rInh2 as an exogenous substrate. As shown in Fig. 7A, rInh2 was phosphorylated by kinases present in the cytosol of HS68 fibroblasts. Cytosols prepared from S phase cells (Fig. 7A, lane 4) had a specific activity (32P labeling/µg of cytosol protein) that was 1.6 times higher than that of cytosols from G1 phase cells (Fig. 7A, lane 1). Rabbit Inh2 is known to be phosphorylated at S86, S120, and S121 by CK2, so we added 1 µg of heparin, an inhibitor of CK2 (42), to the 60-µl reaction mixtures. At this dosage, heparin strongly inhibited the phosphorylation of rInh2 (Fig. 7A, compare lanes 1 versus 2 and lanes 4 versus 5), reducing labeling by 40% using G1 or by 60% using S phase cytosol as a source of kinase (quantitation done by scintillation counting of the excised proteins). We calculated a 2.6-fold increase from G1 to S phase in the heparin-sensitive Inh2 kinase activity, attributed to CK2.


Fig. 7. Phoshorylation of rInh2 by kinases in the cytosols from G1 and S phase cells. A, autoradiograph of 32P-phosphorylated rInh2 (2 µg; lanes 1, 2, 4, and 5) that was incubated without (lanes 1 and 4) or with (lanes 2 and 5) 1 µg of heparin for 1 h at 30 °C with cytosols (5 µg of protein) from synchronized HS68 cells (lanes 1-3: 8 h after serum stimulation; lanes 4-6: 21 h after serum stimulation) in the presence of [gamma -32P]ATP. Lanes 3 and 6 are controls without added rInh2, to reveal phosphorylation of proteins in the cytosols. B, phosphopeptide mapping. The 32P-labeled rInh2 in lanes 1 and 4 of panel A and rInh2 labeled by purified CK2 were digested with trypsin, and peptides were resolved in two dimensions as described under "Materials and Methods." a, phosphorylation by lysate of G1 cells, 8 h after serum stimulation; b, phosphorylation by lysate of S phase cells, 21 h after serum stimulation; c, phosphorylation by purified CK2. Sites of sample application are marked by x. Corresponding phosphopeptides are denoted with numbers.

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To examine the sites of phosphorylation in rInh2, the radiolabeled samples shown in Fig. 7A, lanes 1 and 4, were excised from the gel and subjected to two-dimensional tryptic phosphopeptide mapping as described under "Materials and Methods." As shown in Fig. 7B, panel a, there was one predominant tryptic phosphopeptide (peptide 1) plus several other phosphopeptides (peptides 2, 4, 5, and 6) recovered from rInh2 after labeling with G1 cytosol as a source of kinase. In contrast, rInh2 phosphorylated using cytosol from S phase cells (Fig. 7B, panel b) had only a trace of phosphopeptide 1 and instead was labeled with about equal intensity in five other phosphopeptides (peptides 2-6). Phosphopeptides 2, 4, and 5 matched those obtained from rInh2 phosphorylated with purified CK2 (Fig. 5B, panel c). Therefore, in S phase cells, CK2 accounted for most of the rInh2 kinase activity. There were two notable differences between the G1 and S phase phosphopeptide patterns. First, there was a kinase in G1 phase cytosols that produced phosphopeptide 1. This kinase and the site in Inh2 both remain unidentified. Second, both phosphopeptides 3 and 6 were produced by a cytosolic kinase(s) from S phase cells but not by purified CK2. These analyses show that (a) there are multiple Inh2 kinases in cytosols; (b) the level of heparin-sensitive Inh2 kinase activity increased from G1 to S phase; and (c) the sites phosphorylated in Inh2 changed between G1 and S phase.


DISCUSSION

This study examined the intracellular localization of Inh2 in living cells during G1 and S phases of the cell cycle using an Inh2-GFP fusion protein. Accumulation of Inh2-GFP from the cytoplasm into the nucleus occurred during S phase. GFP itself, expressed as a control, remained uniformly distributed in the cell throughout G1 and S phase. Mutations to eliminate phosphorylation of Inh2 at either Thr-72, or Ser-86, or Ser-120 and Ser-121 abolished nuclear localization during S phase. Differences in amino acid residues at positions immediately adjacent to a phosphorylation site (e.g. C85 in human versus Y85 in rabbit) do not affect nuclear import of Inh2,2 supporting the idea that the multisite phosphorylation of Inh2 is required for its cell cycle-dependent localization.

Phosphorylation of Inh2 is cooperative, or "synergistic," because reaction with CK2 at Ser-86 potentiated phosphorylation of Thr-72 by glycogen synthase kinase 3, making phosphorylation of Thr-72 highly sensitive to the extent of prior phosphorylation by CK2. Different proline-directed protein kinases, namely glycogen synthase kinase 3, CDK2, and mitogen-activated protein kinase, can phosphorylate Thr-72. Therefore, it is possible that mutation of Ser-86 prevented nuclear localization indirectly by interfering with efficient phosphorylation of Thr-72. We present evidence that Thr-72 was phosphorylated in living cells even in the triple mutant S(86/120/121)A. One might suspect, therefore, that the failure of the S86A mutant of Inh2-GFP to localize in the nucleus indicates a function for this site beyond simply promoting phosphorylation of Thr-72. In addition, the CK2 phosphorylation sites at S120/121 themselves might facilitate nuclear accumulation, parallel to the case of SV40 T antigen (see below). It seems that all of these phosphorylation sites in Inh2 contribute to and are required for nuclear localization during S phase.

Cell cycle-dependent nuclear localization of Inh2 also depended on a basic sequence resembling a NLS. Because the molecular size of Inh2-GFP is 63 kDa, it seems unlikely that the distribution of this fusion protein was a result of simple diffusion between cytoplasm and nucleus (43, 44). At residues 134-147 in Inh2, there is a sequence of two clusters of basic amino acids in a region of Inh2 that is related in sequence to c-fos (5, 22). Mutation of lysines 143 and 145 abolished nuclear localization of Inh2 during S phase. As a transcription factor, c-fos surely is imported into the nucleus, but its NLS has not been functionally defined. Maybe Inh2 and c-fos are similar in sequence in the region used as their NLS.

There are several examples of nuclear import of proteins mediated by a NLS and regulated by phosphorylation. Undoubtedly the best known example is that of SV40 T antigen, which has a NLS with the sequence PKKKRKV (45). When this sequence is fused or conjugated to other proteins, it results in their accumulation in the nucleus. However, it has not been well appreciated that the rate of nuclear import mediated by this NLS is controlled by phosphorylation of two serine sites approximately 20 residues to the N-terminal side (46). Phosphorylation of these serines by CK2 accelerated by 30-fold the rate of nuclear import of a SV40 T antigen-beta galactosidase fusion protein (47). The spacing of the dual CK2 Ser phosphorylation sites and basic residues of the putative NLS in Inh2 matches that in large T antigen, so similar mechanisms may govern localization of these proteins. Phosphorylation of cyclin B also results in nuclear localization, which is critical for its function at G2/M in the cell cycle (48). The sites in cyclin B under cell cycle control are thought to be phosphorylated by CK2 and mitogen-activated protein kinase, an interesting parallel to Inh2. Other examples of phosphorylation-regulated nuclear import are the transcription factor SWI5 of S. cerevisiae and the v-Jun oncoprotein. Both proteins are localized in nuclei in their unphosphorylated forms. Phosphorylation of SWI5 by CDC28 kinase results in its displacement into the cytoplasm (49). Phosphorylation of v-Jun also is correlated to loss of nuclear localization (50). Thus, phosphorylation can be employed to enhance or to eliminate nuclear localization.

The Inh2 kinase activity in cytosols increased between G1 and S phase. Most of this activity was potently inhibited by heparin, a characteristic of CK2. The results fit together with the previous data showing that CK2 activity oscillates during the cell cycle, peaking at S phase (51). Inh2 phosphorylated by these S phase cytosols or by purified CK2 gave several of the same major phosphopeptides. This is consistent with Ser-86, Ser-120, and Ser-121, the sites in Inh2 phosphorylated by CK2, being phosphorylated during S phase. Peptides 3 and 6 were not produced by purified CK2, but were prominent in Inh2 phosphorylated by cytosols from S phase cells. The PhosPepSort2 program (GCG Computer Group) predicts this map location for phosphopeptides containing Thr-72, and because peptide 6 was produced by both G1 and S phase cytosols, we suspect that Thr-72 is phosphorylated during throughout G1 and S phases. A remaining issue is the identity of the site in phosphopeptide 1, which was the major site phosphorylated by G1 phase cytosol. The change in localization of Inh2 at G1/S may involve inactivation of a kinase and the dephosphorylation of the site in phosphopeptide 1. Overall, the results contribute to the concept that CK2 is part of a signaling system that regulates the nuclear import of multiple proteins at G1/S (reviewed in Refs. 52 and 53).

What might be the biological function of the nuclear accumulation of Inh2 at G1/S? One possibility is that it inhibits PP1, which dephosphorylates the retinoblastoma protein Rb in the nucleus throughout the G1 period (54). Recent evidence shows Rb-dependent cell cycle arrest at G1/S in cells loaded with a PP1 mutant that lacks an inhibitory phosphorylation site at T320 (55). Inhibition of nuclear PP1 by an influx of Inh2 plus CDK phosphorylation of T320 could form a double shut-off system for PP1. Inhibition of PP1 coupled to activation of cyclin D:CDK4 would be a potent means to produce abrupt phosphorylation of Rb, which is recognized as a key step for entry into S phase (reviewed in Ref. 56).


FOOTNOTES

*   This research was supported in part by Grant BE 130 from the American Cancer Society and by Grant GM-56362 from the National Institutes of Health, and we used facilities provided by the Lucille P. Markey Charitable Trust.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Dagger    Present address: MaGee-Women's Research Institute, Pittsburgh, PA 15213.
§   To whom correspondence should be addressed: Center for Cell Signaling, Box 577, Hospital West 7196, University of Virginia Health Sciences Center, Charlottesville, VA 22908. Tel.: 804-924-1235; Fax: 804-924-1236; E-mail: db8g{at}virginia.edu.
1   The abbreviations used are: Inh2, human phosphatase inhibitor 2; GFP, green fluorescent protein; Inh2-GFP, protein of residues 1-197 of Inh2 fused to GFP; FLAG, epitope tag of sequence DYKDDDDK; rInh2, recombinant rabbit inhibitor-2 protein; N/C, nuclear/cytoplasmic index; CK2, casein kinase 2; NLS, nuclear localization signal; PP1, type 1 protein phosphatase; DMEM, Dulbecco's modified Eagle's medium; FCS, fetal calf serum; PAGE, polyacrylamide gel electrophoresis.
2   J. Somers, N. J. C. Lamb, and D. L. Brautigan, unpublished data.

ACKNOWLEDGEMENTS

We thank Drs. Ned J. C. Lamb and Anne Fernandez for collaborative experiments that provoked these studies, Dr. Richard Day for the generous gift of the pNAssCMVGFPS65T vector, and Christine Palazzolo for help with preparation of the manuscript.


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Volume 272, Number 51, Issue of December 19, 1997 pp. 32308-32314
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.

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