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Volume 272, Number 52, Issue of December 26, 1997
pp. 33167-33174
Genetic and Biochemical Evidence for a Novel Avermectin-sensitive
Chloride Channel in Caenorhabditis elegans
ISOLATION AND CHARACTERIZATION*
(Received for publication, September 18, 1997, and in revised form, October 15, 1997)
Demetrios K.
Vassilatis
§¶,
Joseph P.
Arena
,
Ronald
H. A.
Plasterk
**,
Hilary A.
Wilkinson
,
James M.
Schaeffer
,
Doris F.
Cully
 and
Lex H. T.
Van der
Ploeg
From the Department of Genetics and Molecular
Biology, Merck Research Laboratories, Rahway, New Jersey
07065-0900, the § Department of Genetics and Development,
Columbia University, New York, New York 10032, the ** Division of
Molecular Biology, Netherlands Cancer Institute, Plesmanlaan 121, 1066 CX Amsterdam, The Netherlands, the Department of Cellular
Biochemistry and Physiology, Merck Research Laboratories,
Rahway, New Jersey 07065-0900, and the  Department
of Parasite Biochemistry and Cell Biology, Merck Research
Laboratories, Rahway, New Jersey 07065
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
FOOTNOTES
ACKNOWLEDGEMENTS
Note Added in Proof
REFERENCES
ABSTRACT
Avermectins are a class of macrocyclic
lactones that is widely used in crop protection and to treat helminth
infections in man and animals. Two complementary DNAs (GluCl and
GluCl ) encoding chloride channels that are gated by avermectin and
glutamate, respectively, were isolated from Caenorhabditis
elegans. To study the role of these subunits in conferring
avermectin sensitivity we isolated a mutant C. elegans
strain with a Tc1 transposable element insertion that
functionally inactivated the GluCl gene (GluCl ::Tc1).
GluCl ::Tc1 animals exhibit a normal phenotype including
typical avermectin sensitivity. Xenopus oocytes expressing GluCl ::Tc1 strain mRNA elicited reduced amplitude
avermectin and glutamate-dependent chloride currents.
Avermectin binding assays in GluCl ::Tc1 strain membranes
showed the presence of high affinity binding sites, with a reduced
Bmax. These experiments suggest that GluCl
is a target for avermectin and that additional glutamate-gated and
avermectin-sensitive chloride channel subunits exist in C. elegans. We isolated a cDNA (GluCl 2) encoding a chloride channel that shares 75% amino acid identity with GluCl . This subunit forms homomeric channels that are gated irreversibly by avermectin and reversibly by glutamate. GluCl 2 coassembles with GluCl to form heteromeric channels that are gated by both ligands. The presence of subunits related to GluCl may explain the low level
and rarity of target site involvement in resistance to the avermectin
class of compounds.
INTRODUCTION
Extensive use of parasiticides and pesticides has resulted in the
emergence of resistant strains of target organisms. Characterization of
the molecular targets of such compounds would help elucidate their mode
of action and mechanisms of resistance. Avermectins are a class of
macrocyclic lactones with insecticidal and nematocidal activity.
Abamectin (avermectin B1) is a miticide and insecticide used in crop protection. Ivermectin (22,23-dihydroavermectin
B1) is an anthelmintic used to treat Dirofilaria
immitis (heartworm) infections in dogs and
onchocerciasis (river blindness) in humans (1). Avermectins
have been shown to increase chloride permeability in insect and
crustacean muscles (2-8). Incubation of Caenorhabditis elegans with ivermectin results in inhibition of pharyngeal
pumping and egg laying as well as overall paralysis (9-12).
Xenopus laevis oocytes injected with C. elegans
mRNA express avermectin-sensitive glutamate-gated chloride
(GluCl)1 channels (13-15).
Using Xenopus oocytes as an expression system, two
functional cDNAs (GluCl and GluCl ) encoding C. elegans glutamate-gated and avermectin-sensitive chloride channel
subunits were isolated (16). The individual subunits expressed
functional homomeric channels that were selectively responsive to
ivermectin or glutamate, respectively. Coexpression of GluCl and lead to formation of heteromeric channels that exhibited the rapidly
activating reversible glutamate- and irreversible ivermectin-sensitive
currents found in C. elegans mRNA injected oocytes (15,
16). Phylogenetic analysis suggests that GluCl and GluCl
represent an evolutionarily distinct class of ligand-gated ion channels
that may be orthologous to the vertebrate glycine receptors (17).
Extensive use of avermectins has led to the appearance of resistance to
this class of compounds. Low level (3-10-fold) ivermectin resistance
has only been detected in parasitic nematodes of goats and sheep. In
most cases multiple resistance to other groups of drugs is involved
(18). These findings suggest that either ivermectin acts on multiple
targets or that the target site is involved in essential processes.
The extensive genetic characterization of C. elegans makes
it a useful system to study the function of GluCl channels in
vivo and the mechanisms of resistance to ivermectin. In an attempt to understand the role of GluCl channels in conferring avermectin sensitivity and their physiological function, we determined the chromosomal localization of the GluCl and GluCl genes and
searched for known mutations mapping to these loci. However, mutations attributed specifically to these genes could not be identified. We then
identified a C. elegans strain with a Tc1 transposable element insertion in the GluCl gene. Here, we report the biochemical characterization of this mutant strain and the isolation of a novel
subunit (GluCl 2) with properties similar to GluCl .
EXPERIMENTAL PROCEDURES
Chromosomal Location of the GluCl and GluCl
Genes
Grids with ordered YAC clones were hybridized with
32P-labeled probes using the Random Priming Kit (Boehringer
Mannheim). Cosmid clones spanning the regions of the hybridizing YAC
clones were kindly provided by Dr. Alan Coulson (Medical Research
Council, Cambridge). Cosmid clone DNA isolation was performed by
alkaline lysis using Wizard Mini- and Maxiprep kits (Promega).
Hybridizations were done at 42 °C in 50% formamide overnight, and
washed at 65 °C in 0.2 × SSC, 0.1% SDS.
Identification of the GluCl ::Tc1 Strain
Pools
of DNA lysates corresponding to a mutant bank of frozen C. elegans strains with random Tc1 transposable element insertions were screened by PCR (19). Specific primers for the GluCl gene included the nested primers DKV1.3 (5 -TAATGGAGGACCAGTTGTGG-3 ) and
DKV1.4 (5 -GTGATTCTCACTGTTGGAC-3 ) and for Tc1 RI
(5 -GCTGATCGACTCGATGCCACGTCG-3 ) and RII
(5 -GATTTTGTGAACACTGTGGTGAAG-3 ) (Fig. 2). Three orthogonal matrices of
10 96-tube trays were screened with each set of the GluCl -specific
nested primer pair one-dimension at a time in quadruplicate. A single
lysate corresponding to a particular frozen stock in the mutant library
was identified. This stock was thawed and a single animal with a Tc1
insertion in the GluCl gene was identified by single worm PCR (19).
A homozygote strain for the GluCl ::Tc1 insertion was
identified in the progeny of the original animal by Southern analysis.
The GluCl ::Tc1 strain was backcrossed five times to remove
the mutator locus and other possible Tc1 insertions. Some of the
strains used were obtained from the Caenorhabditis Genetics Center.
GluCl ::Tc1 hermaphrodites were backcrossed to
dpy-5/+ males. dpy-5 balances the
mut-2 locus. Homozygous Dpy F2 progeny that no longer carry
the mut-2 locus were identified. These animals were used for
further backcrosses to unc-76/+ males. The use of the
unc-76 marker helped to balance the GluCl ::Tc1
insertion. The presence of the GluCl ::Tc1 mutation after
each backcross was verified by Southern analysis and nested PCR
reactions. The exact location of the Tc1 insertion was identified by
nested PCR amplification of genomic DNA from the
GluCl ::Tc1 strain using the DKV1-3, DKV1-4, and RI and
RII primers, and subcloning into the TA cloning vector (Promega). The
sequence of the insertion point was determined using the dideoxy
termination method (Amersham).
DNA and RNA Isolation
C. elegans strains
N2 and GluCl ::Tc1 maintained on seeded agar
Petri dishes were used to start 1-liter liquid cultures in S Basal
media (20). The resuspended bacterial pellet of a 1-liter overnight
culture of Escherichia coli (OP50) in LB was added to the S
Basal and the cultures were shaken overnight at ambient temperature.
The bacteria were replenished 24 h later and the incubation
continued overnight. The worms were isolated by flotation on 35%
sucrose as described and stored at 80 °C (20). DNA and RNA were
isolated following the Trireagent protocol (21). mRNA was isolated
by two rounds of purification on oligo(dT)-cellulose columns (5 -3 ).
The mRNA was ethanol precipitated, resuspended in RNase-free water,
and stored at 80 °C.
Southern and Northern Analysis
Restriction
endonuclease-digested C. elegans genomic DNA was
fractionated on agarose gels. The genomic fragments were transferred to
nitrocellulose filters and hybridized with 32P-labeled
probes prepared using the Random Priming Kit (Boehringer Mannheim).
High stringency hybridizations were performed at 42 °C in 50%
formamide. Filters were washed to 0.1 × SSC, 0.1% SDS at 65 °C prior to exposure to Kodak x-ray film. Northern analysis of
C. elegans mRNA was performed according to the procedure
of Boedtker (22). Low stringency Northern hybridizations with
[ -32P]ATP-labeled ANTI 1.1 oligonucleotide were
performed at 35 °C in 6 × NET (1 × NET: 150 mM NaCl, 1 mM EDTA, 15 mM Tris-HCl,
pH 7.5, 1 × Denhardt's solution, 2% dextran sulfate, 0.02%
sodium pyrophosphate, 0.1% SDS) with tRNA (40 µg/ml; Sigma) added as carrier. The filters were washed at 50 °C in 6 × SSC, 0.5%
Triton X-100 with several buffer changes and exposed at 80 °C on
Kodak x-ray film. Several washes at higher stringencies (up to
62 °C) were performed to improve signal to noise ratios.
RNase H Digestions
10 µg of either wild type or
GluCl ::Tc1 mRNA was mixed with 200 ng of an antisense
oligonucleotide (ANTI 1.1 5 -CCAGGTAGCCATTGCCGAAGC-3 ) to GluCl in
50 mM Tris, pH 8.0, 150 mM NaCl, 100 mM MgCl2, and 20 units of RNasin (Promega)
(22.5 µl total volume). The mixture was incubated at 42 °C for 15 min and then at ambient temperature for 30 min. After the addition of
10 mM dithiothreitol (3 µl) and RNase H (4 µl, Promega
4.0 units/µl) the reaction was incubated at 37 °C for 30 min. The
samples were ethanol precipitated with the addition of
NH4OAc (3 µl) and ethanol (81 µl).
Reverse Transcription and PCR
Reverse transcription
reactions were performed using 200 ng of C. elegans
mRNA. cDNA was synthesized with random primers using the
reagents of the Superscript kit (Life Technologies, Inc.). PCR
reactions were performed using the Superscript kit (Life Technologies, Inc.) adding 20 µCi of [ -32P]dCTP and the following
primers: (base 565 of the GluCl cDNA) 5 -GAATACACAATGATGGTACAG-3 and (base 680 of the GluCl cDNA) 5 -TGCAAGATCAATGGAACACTG-3 . PCR conditions were 95 °C 1 min, 55 °C 2 min, 72 °C 3 min for 35 cycles. The reactions were phenol extracted, ethanol precipitated, resuspended in 2 µl of
H2O, mixed with stop solution of the Sequenase kit (U. S. Biochemical Corp.), heated at 65 °C for 4 min, and
electrophoresed in a 7% sequencing gel. The gel was fixed in 5%
methanol, 5% acetic acid for 15 min, dried, and exposed to x-ray
film.
Isolation of GluCl 2 cDNA
Reverse transcription
reactions were performed using 200 ng of C. elegans
mRNA. First strand cDNA was synthesized with random or
oligo(dT) primers using the reagents of the Superscript kit (Life
Technologies, Inc.). PCR reactions were performed using the Superscript
kit (Life Technologies, Inc.) and the following primers:
5 -TTCAAACGTCATTTCATCCAATG-3 and 5 -TCTCCATTGAGGGCACCGGTATG-3 . PCR
conditions were 95 °C 1 min, 62 °C 2 min, 72 °C 3 min for 45 cycles. The GluCl 2 cDNA PCR product was subcloned to the pGEM-T easy vector (Promega). Subsequently, the
SacII/PstI fragment containing the GluCl 2
cDNA was transferred to Bluescript SK vector. A poly(A) tail was
added by annealing and ligation of two oligonucleotides containing 25 As to the NotI/PstI sites.
Electrophysiology
Xenopus oocytes from the same
donor were used in every set of experiments. Oocytes were injected with
50 nl of mRNA (1 µg/µl) or cRNA and voltage-clamped at 80 mV
at room temperature using a standard two-microelectrode voltage clamp
as described (13, 16). Oocytes injected with mRNA were analyzed 2 days after injection while those injected with cRNA 2-4 days after
injection. The water-soluble avermectin derivative, IVMPO4,
was used for these studies. GluCl 2 cRNA was synthesized using the T3
promoter of the Bluescript vector as described (16). The reported
current amplitudes are average responses of at least four oocytes. All
data in text are mean ± S.E.
Ivermectin Binding Assays and Pharmacology
Four different
membrane preparations of wild-type and GluCl ::Tc1 animals
were tested for [3H]IVM binding as described (23).
Wild-type and GluCl ::Tc1 animals were grown in liquid
media, membranes were prepared and binding assays were done in parallel
for each set (20). Motility assays in solution and plates as well as
egg laying assays were done as described (9, 24). Approximately 50-100
animals of mixed developmental stages or single L4 hermaphrodites were
used for each ivermectin concentration (0.1-500 nM).
RESULTS
Chromosomal Mapping of GluCl and GluCl Genes
The
GluCl and GluCl genes were assigned to yeast artificial
chromosome clones and corresponding cosmids (Fig.
1). The GluCl gene was found to be
within cosmid clone C25D4 of contig 313 on chromosome V, while the
GluCl gene was present within cosmid clone C04E4 of contig 465 on
chromosome I. These data indicate that the GluCl gene is located
between unc-76 and dpy-21 while the GluCl gene
is distal to unc-63 and next to unc-38. The
unc-38 mutation has been assigned to cosmid clone ZZ#11 that
overlaps with cosmid C04E4. The nucleotide sequence of
unc-38 shows it to be related to the nicotinic acetylcholine
receptors and therefore does not represent a mutation in the GluCl
gene (25). No other mutations have been assigned to the cosmids
containing the GluCl and GluCl genes.
Fig. 1.
Chromosomal map of the C. elegans
GluCl and GluCl genes. YAC clones and the corresponding
cosmids that hybridized to the GluCl (A) and GluCl
(B) cDNAs are shown in relation to the genetic map.
Filled boxes indicated by arrows show the
location of each of the genes in the cosmid inserts. The genetically
defined region between unc-76 and dpy-21 is
approximately 5 centimorgans, while the region between
unc-38 and unc-63 is approximately 0.5 centimorgans.
[View Larger Version of this Image (19K GIF file)]
Isolation of the GluCl ::Tc1 Strain
To study the
functional role of the GluCl channels in C. elegans we
sought to develop null mutants in the GluCl and GluCl genes using
transposon insertional mutagenesis (19). The C. elegans
strain, MT3126, which shows a high frequency of Tc1 transposable element insertions, was used to screen for mutations in the GluCl and GluCl genes. Tc1 insertions in the GluCl gene (strain NL704, allele pk54::Tc1) and GluCl gene (strain NL705, allele
pk55::Tc1) were identified by screening a frozen transposon
mutant bank arranged in an orthogonal matrix (19). A Tc1 insertion in
the GluCl gene that was identified did not result in a null mutation
(data not shown). Our subsequent attempts to obtain a null mutant in the GluCl gene by searching for a Tc1 excision/deletion event by PCR were unsuccessful (data not shown). A GluCl gene Tc1
insertion event identified did result in gene inactivation. A
homozygous GluCl ::Tc1 strain with a Tc1 insertion in the
GluCl gene was isolated and the majority of the irrelevant Tc1
insertions were eliminated by backcrosses.
Sequencing of the Tc1 insertion region of the GluCl ::Tc1
gene revealed that the Tc1 insertion (amino acid 255, Figs.
2 and 7) disrupted the putative
extracellular N-terminal domain of the GluCl protein. The Tc1
insertion interrupts a highly conserved, length invariant disulfide
loop that is found in all ligand-gated anion channels (Fig. 2). Thus,
it is unlikely that the GluCl ::Tc1 gene encodes a
functional channel subunit.
Fig. 2.
Schematic representation of the
GluCl ::Tc1 allele. The nucleotide sequence of the
junction point is indicated in the lower part of the figure.
The Tc1 sequence is in lowercase characters. The
approximate positions of DKV1.3, DKV1.4, RI, and
RII are indicated.
[View Larger Version of this Image (8K GIF file)]
Analysis of GluCl ::Tc1 Transcripts
To confirm
that the Tc1 insertion resulted in a mutated GluCl gene we compared
the GluCl gene products of wild-type N2 and GluCl ::Tc1
animals (Fig. 3, lanes 1 and
2, respectively) by Northern blot analysis. A GluCl
cDNA probe detected 1.6- and 2.3-kilobase (kb) transcripts in the
N2 lane and 0.8-, 1.6-, 2.3-, and 3.2-kb transcripts in the
GluCl ::Tc1 lane (Fig. 3). The 0.8-kb mRNA that is
specific for GluCl ::Tc1 hybridized to a probe
corresponding to the region 5 of the Tc1 insertion site but not to a
probe derived from the region 3 of the Tc1 insertion (data not shown). These results indicate that the 0.8-kb mRNA (denoted with an
asterisk in Fig. 3) is an N-terminal truncated transcript of
the GluCl gene. The 1.6- and 2.3-kb mRNAs that appear in the
wild-type lane were reduced in intensity in the GluCl ::Tc1
lane by 15-20 fold, as determined by PhosphorImager intensity
quantitation. Expression of GluCl mRNA in the
GluCl ::Tc1 strain was unaffected, showing that disruption
of the GluCl gene does not affect GluCl transcription levels
(data not shown).
Fig. 3.
Northern analysis of the
GluCl ::Tc1 transcripts. Lane 1, wild-type
mRNA; lane 2, GluCl ::Tc1 mRNA. The Tc1
insertion has resulted in the truncation of the primary transcript
(lane 2, asterisk), however, there remain apparently
wild-type GluCl transcripts due to somatic excision of Tc1 (see
text).
[View Larger Version of this Image (22K GIF file)]
The GluCl ::Tc1 strain is homozygous for the Tc1 insertion
and appears genetically stable. However, low frequency somatic excision
of Tc1 transposable elements has been reported by several laboratories
(26, 27). Thus, it is likely that the faint transcripts at 1.6- and
2.3-kb that appear in the GluCl ::Tc1 strain are the result
of somatic excision of Tc1. This was confirmed by analysis of the Tc1
integration/excision site by reverse transcription of mRNA followed
by PCR amplification of the resultant cDNA. Reverse transcriptase-PCR reactions of GluCl ::Tc1 strain mRNA
with primers flanking the integration site revealed multiple reverse
transcriptase-dependent bands that were not present in the
N2 mRNA (see "Experimental Procedures" for details)
(data not shown). These bands were up to 50 nt larger or up to 20 nt
smaller than the wild-type GluCl PCR-derived control fragment. Bands
corresponding to the wild-type GluCl PCR-derived control fragment
were not detected in the GluCl ::Tc1 strain mRNA. These
results indicate that the 1.6- and 2.3-kb GluCl transcripts arise
from imperfect somatic Tc1 excision and are mutated at the site of
excision. Due to small deletions or amino acid additions at this
highly conserved region the majority of these (near) full-length
GluCl mRNAs are likely to be defective (28). However, it is
possible that a small percentage of these transcripts is
functional.
In summary, as a result of the Tc1 insertion a truncated GluCl
mRNA encoding a nonfunctional protein is generated. A low level of
near full-length GluCl mRNA may result in some somatic cells by
Tc1 excision that could restore the reading frame in one-third of these
rare mRNAs. We therefore conclude that the GluCl gene is
functionally inactivated in most cells of the GluCl ::Tc1 animals and the amount of functional GluCl mRNA in the
GluCl ::Tc1 strain is reduced at least 45-60-fold.
Phenotypic Analysis and Pharmacology
The
GluCl ::Tc1 strain was inspected for phenotypic
abnormalities and found to lack any visible defects. Since the GluCl channel is thought to be a target of avermectin, we tested the GluCl ::Tc1 strain for sensitivity to avermectin and found
it to be equal to the wild-type strain. Ivermectin sensitivity was tested in motility assays in liquid (9) plates and egg laying (24)
assays (data not shown). This result may indicate that C. elegans expresses additional ivermectin-sensitive GluCl channel(s) that can functionally compensate for the elimination of GluCl .
Expression of GluCl ::Tc1 Strain
mRNA
Wild-type and GluCl ::Tc1 animals were
tested for the presence of ivermectin-sensitive GluCl channels by
mRNA expression in Xenopus oocytes. The average response
to 1 mM glutamate was 266 ± 20 nA for oocytes
injected with wild-type mRNA and 84 ± 7 nA for those injected
with GluCl ::Tc1 strain RNA; the average IVMPO4 response was 218 ± 16 and 75 ± 8 nA, respectively (Fig.
4). Perfusion of Xenopus
oocytes with 100 µM picrotoxin (PTX), can distinguish between glutamate elicited currents from homomeric GluCl (PTX sensitive) and heteromeric GluCl and (PTX insensitive) GluCl channels (13).2 The glutamate
responses in oocytes injected with either wild-type or
GluCl ::Tc1 mRNA were insensitive to 100 µM PTX, indicating that the expressed channels were
heteromeric (data not shown). These data indicate an approximately
3-fold difference in amplitude of the glutamate and IVMPO4
responses between GluCl ::Tc1 and wild-type samples. To
exclude that this difference results from an overall decreased ability
of the GluCl ::Tc1-injected RNAs to be expressed in
Xenopus oocytes, we measured the induced amplitude of the
endogenous calcium-activated chloride channel currents in the same
oocytes.3 The amplitude of
this current was comparable for oocytes injected with either wild-type
or GluCl ::Tc1 strain mRNA (812.5 ± 77 and 886 ± 83 nA, respectively; control oocytes showed responses of 250 ± 35 nA). If the glutamate and IVMPO4 responses
of oocytes injected with wild-type mRNA were dependent on the
contribution of GluCl mRNA alone, an approximately 45-60-fold
reduction in the current amplitudes would have been expected in oocytes
injected with GluCl ::Tc1 strain RNA.
Fig. 4.
Expression of C. elegans mRNA
in Xenopus oocytes. Glutamate and ivermectin responses
of Xenopus oocytes injected with mRNA from wild-type
(N2) and GluCl ::Tc1. The scale for each of the traces is
different and is indicated on the lower right. The responses
are similar but of different amplitudes.
[View Larger Version of this Image (8K GIF file)]
In reconstitution experiments, synthetic GluCl and GluCl cRNAs
were expressed in a 1:50 ( : ) ratio, which resulted in a 97%
decrease in IVMPO4 and glutamate responses as compared with a 1:1 ( : ) ratio (data not shown). The channels formed in these experiments were insensitive to 100 µM PTX, indicating
that the expressed channels were heteromeric. Expression of
GluCl ::Tc1 mRNA results only in a 3-fold reduction in
its response to IVMPO4 and glutamate. Since the reduction
in the current amplitudes of oocytes injected with
GluCl ::Tc1 strain RNA is only 3-fold, these experiments predict the presence of additional GluCl -like subunit(s) in C. elegans.
Specific Elimination of GluCl Transcripts from Wild-type
mRNA
Specific elimination of GluCl transcripts by RNase H
digestion was employed to confirm that other C. elegans
genes exist that can encode avermectin-sensitive GluCl channels.
mRNA from wild-type and GluCl ::Tc1 animals were
hybridized with an antisense oligonucleotide (ANTI 1.1) to the GluCl
coding sequence, spanning the translation initiation site, and then
treated with RNase H. Specific digestion of the DNA-RNA hybrid of the
GluCl mRNA was confirmed by Northern analysis (Fig.
5A) (29). Labeled ANTI 1.1 oligonucleotide detected intact GluCl transcripts only in the
untreated samples (lane N2, band labeled with arrow in Fig. 5A). RNase H treatment, as expected, eliminated the
hybridization to ANTI 1.1 oligonucleotide. The cross-hybridizing bands
detected with this probe are unaffected and are of identical size in
the RNase H-treated and untreated samples, indicating specific
elimination of the GluCl transcripts. The RNase H-treated GluCl
mRNA in the wild-type and the GluCl ::Tc1 strain were
reduced in size by 60 nt as determined by hybridization of the same
membrane with a GluCl cDNA probe (Fig. 5B). The
remainder of the RNase H-treated RNA samples were expressed in
Xenopus oocytes (Fig. 5C). The oocytes expressing
either wild-type or GluCl ::Tc1 strain mRNA treated with RNase H responded to both glutamate (1 mM) and
IVMPO4 (1 µM): 18 ± 3 nA glutamate,
24 ± 4 nA IVMPO4; 14 ± 4 nA glutamate, 21 ± 4 nA IVMPO4, respectively. The channels formed were
insensitive to 100 µM PTX, indicating that they were
heteromeric. The magnitude of the currents to IVMPO4 and
glutamate were reduced by about 3-fold when compared with the
expression of untreated GluCl ::Tc1 mRNA, as were the
responses of the endogenous Ca2+-activated Cl
channels indicating a nonspecific effect. These experiments indicate that additional chloride channel subunit genes with properties similar
to GluCl are expressed in C. elegans.
Fig. 5.
Specific elimination of GluCl
transcripts. A, Northern analysis of RNase H-treated
mRNA from wild-type (N2) and GluCl ::Tc1. The membrane
was hybridized with the ANTI 1.1 oligonucleotide. Bands corresponding
to the GluCl transcripts appear in the untreated samples and not on
the RNase H-treated samples (the major band in the N2 lane is indicated
by an arrow; the major band in the lane
GluCl ::Tc1 by an asterisk). The size markers on
the left side are in kilobases. B, the same
membrane as on panel B was rehybridized with the GluCl
cDNA probe. The bands detected in the RNase H-treated samples
appear undegraded and of reduced size by ~60 nt in comparison to the
controls. The major bands are indicated by arrows. Size
markers in kb are indicated on the left. C,
electrophysiological responses of Xenopus oocytes injected
with the RNase H-treated mRNA from wild-type (N2/RNase H) and
GluCl ::Tc1 (GluCl ::Tc1/RNase H) analyzed on
panels A and B. Similar responses to both
glutamate and ivermectin are observed.
[View Larger Version of this Image (30K GIF file)]
Equilibrium Binding Analysis of GluCl ::Tc1
Membrane-binding Sites
Membrane preparations of wild-type and
GluCl ::Tc1 strain animals were tested for
[H3]ivermectin binding (30). The
Bmax of the wild-type membranes was 0.55 ± 0.09 pmol/mg of protein (n = 4) while for the
GluCl ::Tc1 membranes this level dropped ~40% to
0.32 ± 0.02 pmol/mg of protein (n = 4) (Fig.
6). These data indicate that high
affinity ivermectin-binding sites exist in C. elegans
membranes in the absence of functional GluCl gene expression.
Scatchard plot analysis of the wild-type membrane binding indicated a
Kd of 0.111 ± 0.019 nM, while for
the GluCl ::Tc1 membrane binding of 0.153 ± 0.018 nM (Fig. 6).
Fig. 6.
Ivermectin binding. Saturation binding
assays of ivermectin to wild-type (A) and
GluCl ::Tc1 (B) membranes. The average values of
four different binding assays for each, mutant and wild-type, were
plotted. The corresponding Scatchard analysis for each curve are
inserted.
[View Larger Version of this Image (12K GIF file)]
Isolation of a GluCl 2 cDNA
The indications for
the presence of additional GluCl -like channels in C. elegans prompted us to search the data bases for related genes.
One such gene, GluCl 2, that showed homology to GluCl (from here
on GluCl 1) was identified within cosmid T10G3 of contig 313 on
chromosome V. The introns of the GluCl 2 gene appear in identical
positions to the introns of the GluCl 1 gene (17). Oligonucleotides
corresponding to the 5 - and 3 -ends of the GluCl 2 gene were used to
isolate a GluCl 2 cDNA by reverse transcriptase-PCR. The
5 -oligonucleotide included a 20-nt upstream sequence of the putative
initiator Met codon, while the 3 -oligonucleotide was upstream of the
putative poly(A) addition signal. Nucleotide sequencing of an isolated
GluCl 2 cDNA revealed no mismatches to the sequence of the
predicted exons of cosmid T10G3. The GluCl 2 cDNA revealed 80, 63, and 61% nucleotide identity with GluCl 1, GluCl , and
DrosGluCl, respectively (31); the corresponding predicted amino acid
identities were 75, 49, and 49%. Alignment of GluCl 2, GluCl 1,
GluCl , and DrosGluCl-predicted amino acid sequences is shown in Fig.
7. The putative GluCl 2 protein has a
289-amino acid long N-terminal extracellular domain followed by three
closely spaced putative transmembrane domains (M1-M3), an 83-amino acid
cytoplasmic loop and a fourth transmembrane domain (M4). Two pairs of
cysteine residues that are conserved in all GluCls and glycine
receptors are found in the N-terminal extracellular domain of GluCl 2
and a protein kinase C recognition sequence is conserved between
GluCl 1 and GluCl 2.
Fig. 7.
GluCl 2 predicted amino acid sequence
comparisons. The predicted amino acid sequences of GluCl 2,
GluCl 1, GluCl , and DrosGluCl were aligned using Pileup and
conserved amino acids were boxed using Prettyplot from the
GCG package. The putative transmembrane domains M1-4 are
underlined (solid lines) and the two putative
disulfide bridges are overlined (dashed lines).
The protein kinase C phosphorylation recognition sequence found in GluCl 1 and GluCl 2 are indicated with an inverted filled
triangle.
[View Larger Version of this Image (70K GIF file)]
GluCl 2 Expression
Xenopus oocytes injected with
GluCl 2 cRNA (500 pg/oocyte) responded to both glutamate (1 mM) and IVMPO4 (1 µM) (Fig.
8A). The glutamate responses
were rapid, desensitizing, and reversible while the IVMPO4
responses were slow and irreversible. The average glutamate response
was 5.7 ± 0.5 µA with an EC50 of 208.3 µM and a Hill coefficient of 2.1, indicating that more
than 1 glutamate molecule is required to open the channel (Fig.
8A). IVMPO4 responses of the same oocytes were
21.4 ± 1.8 µA with an EC50 of 107.8 nM and a Hill coefficient of 1.6 (Fig. 8C). Coapplication of
PTX (100 µM) reduced the average glutamate (1 mM) response to 5.27 ± 0.4 µA indicating a weak PTX
block of the GluCl 2 homomeric channel. The GluCl 2 homomeric
channels were insensitive to -aminobutyric acid (1 mM),
glycine (1 mM), aspartate (1 mM), and kainate
(1 mM).
Fig. 8.
GluCl 2 expression in Xenopus
oocytes. A, glutamate, glutamate and picrotoxin, and
ivermectin responses of Xenopus oocytes injected with
GluCl 2, GluCl 2 and , and GluCl cRNA. The horizontal
lines represent the application duration of the indicated
compounds. B, ivermectin dose-response curves of oocytes expressing GluCl 2 or GluCl 2 and . C, glutamate
dose-response curves of oocytes expressing GluCl 2 or GluCl 2 and
.
[View Larger Version of this Image (14K GIF file)]
Coinjection of Xenopus oocytes with GluCl 2 and GluCl
(10 and 50 pg, respectively) resulted in heteromeric channel formation that responded to both glutamate (1 mM) and
IVMPO4 (1 µM) (Fig. 8A). The
kinetics of the glutamate response retained the kinetics attributed to
GluCl , such as reversibility and slow desensitization, but were PTX
(100 µM) insensitive. The maximal glutamate response was
3356 ± 341 nA, while the maximal IVMPO4 response was
3574 ± 273 nA. Dose-response curves for ivermectin and glutamate
of oocytes coexpressing GluCl 2 and are shown in Fig. 8,
B and C. The ivermectin EC50 was
calculated to be 103 nM with a Hill coefficient of 1.85 and
62 µM glutamate and 2.4, respectively. The GluCl 2 and
heteromeric channels were insensitive to -aminobutyric acid (1 mM), glycine (1 mM), aspartate (1 mM), and kainate (1 mM). These experiments
indicate that the pharmacological properties of Xenopus
oocytes injected with GluCl 1::Tc1 mRNA could be
accounted for by the formation of GluCl 2 and heteromeric
channels.
Since GluCl 2 is homologous to GluCl 1, we tested whether its
expression is altered in the GluCl 1::Tc1 strain. Northern
analysis of mRNA from wild-type and GluCl 1::Tc1
revealed two GluCl 2 transcripts of approximately 1.7 and 2.3 kb
(data not shown). Expression of the two GluCl 2 transcripts in the
GluCl ::Tc1 strain was unaffected (data not shown).
DISCUSSION
A comparison of wild-type and mutant organisms can be instrumental
in addressing questions about gene function. Despite detailed characterization of the GluCl 1 and GluCl proteins in
vitro, their in vivo function remains unknown (16, 32).
We tried to identify previously characterized mutations that map to the GluCl and GluCl genes by determining their chromosomal
localization (Fig. 1). Since such mutations were not identified, a
C. elegans strain with an insertion of the Tc1 transposable
element in the GluCl 1 gene was identified in a frozen transposon
mutant bank. The Tc1 insertion occurred in an exon encoding part of the
extracellular region of the GluCl 1 protein and resulted in
truncated GluCl 1 transcripts.
Correlation between biological activity, binding affinity to C. elegans membranes, and in vitro potency of a series of
avermectin analogs strongly suggests that GluCl 1 and GluCl
represent efficacious ivermectin targets that may have a
physiologically essential function (16, 33, 34). However, inactivation
of the GluCl 1 gene resulted in animals with no obvious phenotype and
typical ivermectin sensitivity, suggesting that there could be
functional complementarity of GluCl channel subunit genes with
similarity to GluCl 1. It is also possible that the developmental and
spatial expression of GluCl 1 is such that interference of ivermectin
with its function does not result in a detectable phenotype, or that
GluCl 1 is expendable. The electrophysiological and biochemical
experiments presented demonstrate the existence of
ivermectin-sensitive, GluCl channels in addition to GluCl 1 in
C. elegans.
As predicted by the above experiments, a gene (GluCl 2) with high
degree of homology to GluCl 1 was identified in the data bases.
Cloning and expression of a cDNA encoding GluCl 2 revealed pharmacological properties similar to GluCl 1. However, in contrast to GluCl 1, GluCl 2 is gated by glutamate. Co-injection of
GluCl 2 and in Xenopus oocytes resulted in heteromeric
channel formation as indicated by the decreased rate of desensitization
of the glutamate response; by the PTX insensitivity of the channels
formed, and by the shift of the glutamate dose-response curve to lower
values (Fig. 8). Interestingly, coexpression of GluCl 2 and reduced the EC50 for glutamate of GluCl from 380 to 62 µM while coexpression of GluCl 1 and increased it
to 1.3 mM (16). This may indicate that the GluCl 2 and
subunit combination may be the naturally occurring one.
Co-immunoprecipitation and co-localization experiments could prove
this association. Our experiments indicate that GluCl 2 can
account, at least partially, for the ivermectin responses of the
GluCl 1::Tc1 mRNA, but cannot exclude the existence of additional avermectin-sensitive GluCl channels besides GluCl 1 and GluCl 2 or that ivermectin acts on other targets in addition to
the GluCl channels.
The target site involvement in the development of resistance to
avermectins is of primary importance. Significant resistance to
ivermectin has emerged in the field but target site involvement has not
been documented. Four-fold resistant strains of Haemoncus contortus, a nematode parasite of sheep, tested for the presence of high affinity ivermectin-binding sites did not indicate an alteration in the Kd or Bmax
over controls (18, 35). Our data indicate that ivermectin may be acting
on multiple related targets. The experiments presented in this paper
predict that high level resistance to ivermectin may be rare because of
the presence of several avermectin-sensitive GluCl channel subunits, each of which may need to be mutated to confer resistance.
GluCl channels are proteins with interesting pharmacological properties
(36). Understanding the physiology of the GluCls can provide insight
into mechanisms of anthelmintic and insecticide resistance (37).
Furthermore, their study could lead to rational approaches to the
discovery of novel anthelmintics and other antiparasitic and
insecticidal agents (38). The GluCl ::Tc1 strain, although it does not exhibit an obvious phenotype, could be useful in
understanding the physiological function of GluCl channels in C. elegans and other invertebrates. Possibly in other genetic
backgrounds a phenotype can be detected. Mutations in other GluCl
channel subunits such as GluCl 2, Cegbr, or GluCl should help in
elucidating the physiological role of the GluCl channels and the action
of the avermectin class of compounds.
FOOTNOTES
*
The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
¶
To whom correspondence should be addressed: Dept. of Cell
Biochemistry and Physiology, RY80Y-300, Merck Research Laboratories, P. O. Box 2000, Rahway, NJ 07065-0900. Tel.: 908-594-7524; Fax: 908-594-5878; E-mail: demetrios_vassilatis{at}merck.com.
1
The abbreviations used are: GluCl,
glutamate-gated chloride; IVM, ivermectin; IVMPO4,
ivermectin phosphate; PCR, polymerase chain reaction; cRNA, copy RNA;
kb, kilobase(s); nt, nucleotide(s); PTX, picrotoxin.
2
A. Etter, personal communication.
3
J. P. Arena, unpublished data.
ACKNOWLEDGEMENTS
We thank Dr. Paul Liberator for
discussions, advice, and for the synthesis of numerous
oligonucleotides. Dr. Michel Hamelin for help and advice with the
backcrosses and critical reading of the manuscript. Drs. Charles Cohen
and Wesley Shoop for critical reading of the manuscript. Ken Liu and
Dr. Reid Leonard in the electrophysiology experiments and Dr. Anna
Pomes for critical advice in the binding assay experiments. The
transposon insertion mutant was isolated by D. K. V. during a
stay in the laboratory of R. H. A. P. and was isolated
from a mutant library supported by the National Institutes of
Health/NCRR Grant 5 R01 RR10082-02.
Note Added in Proof
Dent et al. (Dent, J. A.,
Davis, M. W., and Avery, L. (1997) EMBO J. 16, 5867-5879) have found that avr-15 encodes GluCl 2 and is
required for functional M3 synapse.
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