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Volume 272, Number 9,
Issue of February 28, 1997
pp. 5594-5599
©1997 by The American Society for Biochemistry and Molecular Biology, Inc.
T-cell Proto-oncogene Rhombotin-2 Is a Complex Transcription
Regulator Containing Multiple Activation and Repression Domains*
(Received for publication, November 5, 1996, and in revised form, December 20, 1996)
Shifeng
Mao
§,
Geoffrey A. M.
Neale
and
Rakesh M.
Goorha
§¶
From the Department of Virology and Molecular
Biology, St. Jude Children's Research Hospital, Memphis, Tennessee
38101 and the § Department of Pathology, University of
Tennessee, Memphis, Tennessee 38163
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
REFERENCES
ABSTRACT
The LIM domain protein rhombotin-2
(RBTN-2/TTG-2/LMO2) is involved in many processes, including
leukemogenesis and erythropoiesis. It is thought that the principle
role of RBTN-2 in these processes is to regulate transcription. To
examine the potential for RBTN-2 to modulate transcription, we
constructed RBTN-2/GAL4 DNA-binding domain fusion proteins and measured
their ability to activate transcription of a reporter gene construct.
From these studies we identified a transcription activation domain
within the NH2 terminus of RBTN-2. This activation domain
was further localized within a proline-rich 19-amino acid region. A
second activation domain of 11 amino acids was also identified. This
domain was located within the COOH terminus of RBTN-2, and functioned
in mammalian cells but not in yeast. Furthermore, the two LIM domains of RBTN-2 were shown to function as transcription repression domains. Each individual LIM domain acted as an independent transcription repression domain on a heterologous activation domain. However, in
context of full-length RBTN-2, the LIM domains selectively repressed
the NH2-terminal activation domain, but had no effect on
the COOH-terminal domain. Overall, these results demonstrate that the
T-cell oncogene RBTN-2 is a complex transcription factor possessing
multiple transcription regulatory modules, including two activation
domains and two repression domains.
INTRODUCTION
Chromosomal translocations, juxtaposing two different regions of
the genome, are the recurrent events in human cancers, particularly leukemias (1, 2). Molecular analyses of the breakpoints in lymphocytic
leukemias have revealed that genes specifying transcription factors are
the most frequent target of the changes brought about by these
translocations (2). Translocations cause two types of changes in the
affected transcription factors. In one type, a chimeric fusion
transcription factor is generated when the breakpoints occur in the
coding regions of the affected genes. The resulting fusion
transcription factor, possessing altered specificity, is produced in
the cancer cells. The other type of change results in the increased,
and usually ectopic, expression of a structurally intact transcription
factor. This change most frequently occurs when translocation
breakpoints occur in the regulatory region of a proto-oncogene,
juxtaposing the proto-oncogene to either immunoglobulin or T-cell
receptor genes in lymphocytic leukemias. Thus, either altered or
ectopic expression of proto-oncogenes is thought to contribute toward
the pathogenesis of human leukemias.
Translocations to the rhombotin-2 (RBTN-2/TTG-2/LMO2) locus represent
the second type of change to a proto-oncogene. The RBTN-2 locus at
chromosome 11p13 is the most frequent site of chromosomal translocation
in childhood T-cell acute lymphoblastic leukemia (3-5). Translocations
to this locus involve T-cell receptor genes, and almost invariably
result in high expression of normal RBTN-2 (3, 4). While RBTN-2 is
expressed in virtually all tissues during fetal and adult life, it is
not expressed in T-lymphocytes (4, 6, 7). Thus, the ectopic expression
of RBTN-2 in thymocytes contributes to leukemogenesis as demonstrated
in transgenic mice with enforced expression in T-cells (8-10). A
normal function for RBTN-2 in erythropoiesis has recently been found.
Homozygous null mice lacking RBTN-2 die in utero around day
11 due to lack of red blood cells in the embryonic yolk sac (11). The
mechanism of RBTN-2 protein in its leukemogenic and normal functions is implicated in transcriptional regulation because of its nuclear location in hematopoietic cells (7, 11), and recent demonstration that
RBTN-2 forms complexes with other transcription factors: namely tal-1,
GATA-1, and GATA-2 (12-14).
Additional evidence that RBTN-2 functions in transcriptional regulation
is derived from the structural similarity between RBTN-2 and known
transcription factors. The RBTN-2 gene encodes a 158-amino acid
protein, approximately two-thirds of which is comprised of tandemly
repeated cysteine-rich zinc-binding motifs called LIM domains (15, 16).
The LIM domain was originally identified in the transcription factors
Lin-11 (17), Isl-1 (18), and Mec-3
(19). However, unlike these LIM-homeodomain transcription factors,
RBTN-2 has no demonstrable DNA binding activity (15, 16). Recently, the
LIM domain has been shown to facilitate a variety of protein-protein
interactions. In vitro studies have shown that the LIM
domain can dimerize with other LIM domain (20, 21) or other motifs such
as helix-loop-helix domain (12, 13). Thus, RBTN-2, lacking known
transactivation domains and DNA-binding motifs, was thought to regulate
transcription by binding other transcription factors and modulating
their activity. However, recently, RBTN-2 was shown to possess
transcription activity when fused to the DNA-binding domain of GAL4
(22)1. In this report, we confirm this
transactivation activity and further show that RBTN-2 has complex
transcriptional regulatory activities; it has two separate activation
domains and two repression domains. Furthermore, we show that the LIM
domains, in addition to their known function as protein-protein
interaction domains, have transcription repression activity. These
results support the notion that RBTN-2 may regulate the transcription
of target genes in a complex manner that, when ectopically expressed in T-lymphocytes, may eventually lead to leukemias.
MATERIALS AND METHODS
Plasmids
All RBTN-2 clones and deletion mutants used in
yeast were generated by polymerase chain reaction (PCR)2
and cloned into the NcoI site of the yeast fusion vector
pAS2 (24). Every construct was sequenced fully to verify fidelity of
the PCR. These constructs include full-length RBTN-2 (158 amino acids),
and the following portions of RBTN-2: the NH2 terminus deletion (RdN, amino acids 27-158), the NH2 terminus
region (RN, amino acids 1-26), the COOH terminus deletion (RdC, amino
acids 1-147), the LIM domain region (R2L12, amino acids 27-150,
containing both LIM domains), the first LIM domain (R2L1, amino acids
27-86), and the second LIM domain (R2L2, amino acids 92-150). The
yeast vector pAS2 (a kind gift from Dr. Stephen Elledge, Baylor College of Medicine, Houston, TX) is a GAL4 DNA-binding protein (GBD) fusion
protein expression vector. This vector contains a tryptophan (Trp) selection marker and a yeast origin of replication. A
positive control construct, pACT/c145, encodes the GAL4
activation domain fused with the COOH-terminal 69 amino acids of
the retinoblastoma-binding protein-2 that has been shown to bind
RBTN-2.1
Among the RBTN-2 constructs used in mammalian cells, the
NH2-terminal region deletion mutants and the COOH terminus
region mutant were generated using synthetic oligonucleotides (Center for Biotechnology, St. Jude Children's Research Hospital, Memphis, TN)
and cloned into the HindIII site of mammalian fusion vector pM3 (25). The NH2-terminal region deletion mutants include: RN1-10 (amino acids 1-10), RN1-13 (amino acids 1-13), RN11-19 (amino acids 11-19), RN11-23 (amino acids 11-23), RN11-25 (amino acids 11-25), RN11-29 (amino acids 11-29), and RN14-23 (amino acids
14-23). The COOH terminus region mutant is RC (amino acids 148-158).
All constructs were sequenced to verify the fidelity of the
oligonucleotide synthesis, and the open reading frame of the cloned
sequences. The pM3 vector is a mammalian version of the GBD fusion
expressing vector under the control of the SV40 early promoter
(25).
The other RBTN-2 constructs used in mammalian cells were generated by
PCR. They include the NH2 terminus region (RN, amino acids
1-29), the NH2 terminus deletion mutant (RdN, amino acids 30-158), the COOH terminus deletion mutant (RdC, amino acids 1-145), the LIM domain region (R2L12, amino acids 30-147), the first LIM domain (R2L1, amino acids 30-83), and the second LIM domain (R2L2, amino acids 94-147). Of these PCR-generated mutants, RN, RdN, and RdC
were cloned into the HindIII site of pM3 vector, while the
LIM domain region mutants, R2L12, R2L1, and R2L2, were cloned into the
EcoRI site of pM3 vector and the EcoRI site of
the pM3/3CGln vector. The pM3/3CGln vector (a kind gift from Dr. Clare
Sample, St. Jude Children's Research Hospital, Memphis, TN), encodes
the GBD fused with the glutamine-rich activation domain (3CGln) from Epstein-Barr virus transcription factor, EBNA3C (26). The LIM domain
mutants cloned into this vector were positioned before and in-frame
with the 3CGln transactivation domain. Authenticity of the above
constructs was confirmed by sequencing.
The CAT reporter gene vector pG5EC contains the gene encoding
chloramphenicol acetyltransferase (CAT), which is under the control of
a promoter with the adenovirus E1b TATA box and five consecutive
GAL4-binding sequences (25). The pCMV- -gal plasmid contains the
-galactosidase gene under the control of the CMV promoter (Clontech,
Palo Alto, CA).
Cell Lines and Transfections
The COS-1 cells and NIH
3T3 cells were grown in Dulbecco's modified Eagle's medium
containing 10% fetal bovine serum, 100 units/ml penicillin, and 100 µg/ml streptomycin.
All transfections were performed using LipofectAMINETM reagent as
described by the supplier (Life Technologies, Inc.). The expression of
fusion proteins in transfection assays was examined by Western blot
using an antibody to the GAL4 DNA-binding domain (Santa Cruz
Biotechnology, Santa Cruz, CA). GAL4 fusion proteins expressed in
transfected cells were immunoprecipitated with the GAL4 DNA-binding
domain antibody, and detected by Western blot using the same
antibody.
Yeast Strain and Assays
The yeast strain Y190
(24) was provided by Dr. Stephen Elledge. It contains two reporter
genes, HIS3 and lacZ, under the control of
promoters containing the GAL4-binding sites (24, 27). The yeast was
grown on YPAD medium, or SD minimal medium supplemented as described
(24).
The pAS2 constructs were transformed into Y190 as described (24). The
activation of the reporter genes, HIS3 or lacZ,
was judged by the ability of transformants: 1) to grow in the absence of histidine (50 mM 3-amino-1,2,4-triazole, a histidine
synthesis inhibitor, was added to increase selection pressure) and 2)
to turn blue on plates containing
5-bromo-4-chloro-3-indolyl- -D-galactoside (40 ng/ml), or
by filter-lift assay as described by the supplier (Clontech).
CAT Assays
Two micrograms each of the following three
plasmids (6 µg total DNA), the CAT reporter construct pG5EC,
GBD-RBTN-2 mutant fusions vectors (pM3), and pCMV- -gal, were
co-transfected into COS-1 cell lines, using 24 µl of LipofectAMINETM
reagent based on the protocol provided by the supplier (Life
Technologies, Inc.). After 72 h, the cells were harvested and the
amount of the cell lysate used in each CAT assay was normalized on the
basis of the -galactosidase activity of each extract. The CAT assays
were performed as described (28).
RESULTS
RBTN-2 Has Intrinsic Transcription Activity in
Yeast
We1 and others (22) have found that RBTN-2,
when fused to a DNA-binding domain, has transactivation activity in
yeast. The full-length RBTN-2 coding sequence was cloned into the GBD
fusion protein expression vector pAS2 and transformed into
Saccharomyces cerevisiae strain Y190, which
contains two reporter gene constructs: HIS3 and
lacZ (24). As shown in Fig. 1, full-length
RBTN-2, when fused to GBD, activated the reporter genes and the
correspondent yeast transformants grew in the absence of histidine and
turned blue in the filter-lift assay, indicating that RBTN-2 indeed has intrinsic transcription activation activity.
Fig. 1.
Transcriptional activity of RBTN-2/Gal4
DNA-binding domain fusion proteins in yeast. A, schematic
representation of the regions of RBTN-2 cloned in the yeast expression
vector pAS2, and summary of the transcription activity of each fusion
protein when transformed into yeast Y190. The topmost figure
depicts full-length RBTN-2, while those below indicate the
portions of RBTN-2 tested for transcription activity in yeast.
Transcription activity of each construct was determined by the ability
of transformants: (i) to produce histidine and grow in the presence of
histidine synthesis inhibitor 3-amino-1,2,4-triazole; and (ii) to
generate blue color (lacZ activity) in filter lift assays.
The two LIM domains of RBTN-2 are indicated by shaded boxes.
B, transcription activity of RBTN-2 fusion proteins as determined
by lacZ activity. Fusion constructs depicted in Panel
A were transformed in yeast Y190 and assayed for lacZ
activity by filter lift assay. Positive -galactosidase activity
is indicated by blue coloring (dark) of the colonies. A positive
control (R2L12/RBP2) is also shown in the figure. This control is a
yeast co-transformant expressing the GBD fusion of both LIM domain
region of RBTN-2 (pAS2/R2L12) and the GAL4 activation domain fusion of
the COOH-terminal end of retinoblastoma-binding protein-2, a RBTN-2
interactive partner (see Footnote 1).
[View Larger Version of this Image (30K GIF file)]
To identify the region(s) of RBTN-2 responsible for this transcription
activity in yeast, we generated various deletion mutants of the RBTN-2
gene by the PCR (Fig. 1A). These deletion mutants were
cloned into the pAS2 vector and transformed into the yeast strain
Y190. As shown in Fig. 1 (panel A and
B), deletion of the NH2-terminal 26 amino acids
(RdN) abolished the activation activity of RBTN-2; while deletion of
the COOH terminus (RdC) had no effect on this activity. Neither LIM
domain alone nor LIM domains together (RL1, RL2 and RL12) showed any
transcription activity. This result further supported the
transactivation activity of RBTN-2 and indicated that the activation
domain was located in the 26-amino acid sequence of the NH2
terminus.
RBTN-2 Functions as a Transcriptional Regulator in Mammalian
Cells
Since RBTN-2 is a mammalian gene, we sought to establish
whether RBTN-2 exhibits transcription activation in mammalian cells. Therefore, the full-length RBTN-2 coding sequence was cloned into the
mammalian GBD fusion protein expression vector pM3 (25). This construct
was co-transfected into COS cells with the CAT reporter gene construct
pG5EC (25) which contains five tandemly repeated GAL4-binding sites in
its promoter region. The transfected cells were incubated for 72 h
for optimum CAT gene expression. After the incubation period, the cells
were lysed and assayed for CAT activity. As shown in Fig.
2A, full-length RBTN-2, when fused to GBD,
showed 3-fold more CAT activity (lane 2) as compared to
control cells that were transfected with the empty pM3 (lane 1). The increase in transcriptional activity was low, but was consistently observed in six different experiments (range 3-6-fold over the background). Control experiments using a CAT reporter plasmid
(E1b-CAT) lacking GAL4-binding sites showed no activity with any of the
constructs tested (Fig. 2B). Thus, the transactivation activity of the fusion proteins was dependent on binding to the GAL4
target sites on the reporter plasmid. These results establish that, as
in yeast, RBTN-2 has transcription activation in mammalian cells. These
findings were confirmed when the NH2-terminal 29-amino acid
region fused to GBD also showed 6-fold higher transcription activity (Fig. 2A, lane 3) as compared to
the control cells (lane 1). However, in contrast to yeast,
we found that deletion of 29 amino acids from the NH2
terminus region or RBTN-2 did not abolish the increase in the CAT
activity (Fig. 2A, lane 4), suggesting the
presence of other transactivation domain(s). Overall, these results
suggested a more complex transcription regulatory behavior of RBTN-2 in
mammalian cells than that seen in yeast.
Fig. 2.
RBTN-2 functions as a transcription factor in
mammalian cells. Full-length, or portions of RBTN-2, were cloned
into the mammalian GBD fusion protein expression vector pM3 and
co-transfected into COS cells with CAT reporter gene constructs. After
72 h, cells were lysed and CAT activity measured. The amount of
cell lysates used in CAT assays was normalized based on transfection efficiency measured using an internal control plasmid expressing -galactosidase activity. Panel A shows a representative
CAT assay using the pG5EC reporter plasmid which contains five tandemly repeated GAL4 DNA-binding sites in the promoter region. Lane
1, pM3 empty vector; lane 2, vector expressing
full-length RBTN-2 (pM3/RBTN-2); lane 3, vector expressing
only the first 29 amino acids of RBTN-2 (pM3/RN1-29); lane
4, vector expressing a RBTN-2 mutant lacking the first 29 amino
acids (pM3/RdN). Panel B shows that the GAL4 DNA-binding
domain is required for transactivation by RBTN-2 constructs. In these
experiments, RBTN-2 constructs were co-transfected with either pG5EC
(lanes 1 and 2) or pE1b-CAT (lanes
3-6). pE1b-CAT is identical to pG5EC except that it lacks the 5 GAL4 DNA-binding sites upstream of the adenovirus E1b promoter. Lanes 1 and 3, pM3 empty vector; lanes
2 and 4, vector expressing the NH2-terminal
activation domain of RBTN-2 (pM3/RN1-29); lane 5, vector
expressing the COOH-terminal activation domain of RBTN-2 (pM3/RC);
lane 6, vector expressing full-length RBTN-2
(pM3/RBTN2).
[View Larger Version of this Image (34K GIF file)]
The NH2-terminal Activation Domain Is Located within a
Proline-rich Region
To further localize the NH2
terminus activation domain, a series of deletion mutants were made
either by PCR or synthesis of oligonucleotides and then cloned into the
pM3 vector (Fig. 3A). These constructs were
transfected into COS cells along with the CAT reporter gene construct
pG5EC. Transfected cells were incubated for 72 h and cell lysates
were assayed for CAT activity. As shown in Fig. 3B, the
first 10 amino acids of the NH2-terminal region (RN1-10)
did not contribute to the transcription activation because this
10-amino acid stretch did not show any significant activity over the
background, whereas, the rest of the 19 amino acids (Fig. 3B,
RN11-29) possessed full activity. Therefore, we further examined
the transcription activity of this 19-amino acid region in detail.
There are only 4 proline residues in full-length RBTN-2, and all these
4 prolines are present in this 19-amino acid stretch (Fig.
3A). When we deleted the sequence from 24 to 29 amino acids,
which contains two consecutive prolines, the transcription activation
was reduced by about 50% (Fig. 3B, RN11-23 and RN1-23), suggesting
that proline residues play an important role in the transcription
activation activity of the NH2 terminus region. The
sequence from residue 15 to 23 has been proposed, by Sanchez-Garcia and
colleagues (22), to have homology with the acidic activation domain of
VP16 and is included in this 19-amino acid stretch. However, the region
containing these amino acids (Fig. 3B, RN14-23) contributed
only about 40% of the total activity, whereas a region lacking 4 amino
acids of the "VP16 homology region" (RN11-19) showed about 60% of
the total activity. To ensure that the differences in activity were not
due to varying amounts of fusion proteins, we examined the fusion
protein levels by Western blot analysis (Fig. 3C). The
results showed that very similar amounts of the fusion proteins were
expressed in the transfected cells. Therefore, the differences in CAT
activity reflect the differing abilities of the
NH2-terminal deletion constructs to activate transcription. Based on this deletion analysis, we conclude that the complete activation domain of the NH2 terminus resides in the
19-amino acid stretch from residue 11 to 29, and that the proline
residues and VP-16 homology regions contribute significantly to the
total transactivation activity of the NH2 terminus
region.
Fig. 3.
The NH2-terminal activation
domain resides within a proline-rich region. Various portions of
the NH2-terminal region were cloned into the mammalian GBD
fusion protein expression vector pM3 and analyzed for transcription
activity as described in the legend to Fig. 2. A, schematic
representation of the NH2-terminal region and its deletion
constructs. Each construct is named based on the position of the first
and the last amino acid residues. Each bar corresponds to
the length of the amino acid sequence and the position of the construct
relative to the NH2-terminal region. B, the
relative CAT activity of the NH2-terminal deletion constructs. Quantification of CAT activity was performed using a
PhosphorImager (Molecular Dynamics) and the associated software ImageQuant. The relative CAT activity of each construct is represented as a percentage of the CAT activity of the complete NH2
terminus (RN1-29). C, equivalent amounts of GAL4 fusion
proteins are expressed in transfection assays. Extracts from the
transfected cells were immunoprecipitated with a GAL4 DNA-binding
domain antibody, and fusion proteins were detected by Western blot
using the same antibody. Lane 1, empty pM3 vector expressing
only the GAL4 DNA-binding domain (GBD); lanes 2-8, pM3
vector containing the various NH2-terminal deletion mutants
of RBTN-2 as indicated in Panel A. Molecular mass in
kilodaltons (kDa) is shown to the right of the blot. The intense band at 51 kDa corresponds to the GAL4 DNA-binding region antibody used in the initial immunoprecipitation.
[View Larger Version of this Image (35K GIF file)]
The COOH Terminus of RBTN-2 Has Transactivation Activity in
Mammalian Cells
In contrast to yeast, deletion of the
NH2 terminus did not abolish the activity of RBTN-2 in
mammalian cells (Fig. 2A, lane 4). These results
show that additional activation domain(s) exist in regions other than
the NH2 terminus of RBTN-2. Since deletion of the COOH
terminus greatly reduced the overall activity (Fig. 4,
lane 4), we therefore tested the transcription activity of this region by cloning the COOH terminus of RBTN-2 into pM3 vector. COS
cells transfected with the pM3 construct containing the COOH terminus
region (11 amino acids) and the CAT reporter gene construct pG5EC
showed 4 times more CAT activity than the control cells (Fig. 4,
compare lanes 1 and 3). These results show that
the COOH terminus region of RBTN-2 possesses transcription activation
activity in mammalian cells. Surprisingly, the existence of the COOH
terminus seems to be critical to the overall activation activity of
RBTN-2 in mammalian cells, since its deletion (Fig. 4, lane
4) greatly reduced the overall transcription activation, even
though the truncated RBTN-2 molecule contained the
NH2-terminal activation domain.
Fig. 4.
The COOH terminus of RBTN-2 contains the
second activation domain. COS cells were co-transfected with the
CAT reporter gene, pG5EC, and GBD fusion expression plasmids bearing
full-length or portions of RBTN-2. CAT assays were performed as
described in the legend to Fig. 2. Lane 1, pM3 empty vector;
lane 2, construct expressing full-length RBTN-2
(pM3/RBTN-2); lane 3, construct expressing only the last 11 amino acids of RBTN-2 (pM3/RC); lane 4, construct expressing
a RBTN2 mutant lacking the last 11 amino acids (pM3/RdC).
[View Larger Version of this Image (50K GIF file)]
LIM Domains of RBTN-2 Act as Transcriptional Repressors
We
observed an interesting phenomenon in that the overall activation
activity of RBTN-2 did not reflect the sum of the individual activation
domains of the NH2 terminus and the COOH terminus in mammalian cells. In fact, the activity of the NH2 terminus
domain alone is stronger than that of the full-length RBTN-2 (Fig.
2A, lanes 2 and 3), suggesting that
the activity of this domain is somehow repressed in the context of the
whole molecule. Besides the two activation domains at the two termini,
the two LIM domains constitute virtually the rest of the RBTN-2
protein. Therefore, we examined the possibility that the LIM domains
act as transcription repressor. We positioned the LIM domain region of
RBTN-2 between the GBD and a heterologous activation domain. We used
the glutamine-rich region (3CGln) of the Epstein-Barr virus
transcription factor EBNA3C which has been shown to possess
transactivation activity (26). The transcription activity of the 3CGln
(pM3/3CGln) is shown in lane 2 of Fig. 5.
This activity was completely repressed when 3CGln was fused to the LIM
domain region of RBTN-2 (pM3/L12-3CGln, lane 5), indicating
that the LIM domain region of RBTN-2 can repress the transcription
activity of a heterologous activation domain. We further examined if
this repression effect required both LIM domains. Each LIM domain was
cloned independently between the GBD region and 3CGln domain. As shown
in lanes 3 and 4 of Fig. 5, the activation
activity of 3CGln was abolished in the presence of either LIM domain.
As expected, each individual LIM domain (Fig. 5, lanes 6 and
7) had no activation activity. The absence of CAT activity
was not due to unequal amounts of the fusion proteins expressed in the
transfected cells. Western blot analysis showed that roughly equal
amounts of the GAL4 fusion proteins were present (data not shown).
Overall, these results indicate a single LIM domain can act as a
transcription repression domain. In addition, LIM domain repression of
a heterologous activation domain suggests that the LIM domain may
function in other proteins as a transcriptional repressor.
Fig. 5.
The LIM domain acts as transferable
transcription repression domain. The LIM domains of RBTN-2 were
positioned between the GBD of pM3 and a heterologous activation domain
(3CGln) from the Epstein-Barr viral transcription factor EBNA3C (26).
Transcription activity of each construct was determined as described in
the legend to Fig. 2. Lane 1, pM3 empty vector; lane
2, construct expressing the transcription activation domain
(3CGln) of EBNA3C (pM3/3CGln); lane 3, construct expressing
3CGln fused with the first LIM domain of RBTN-2 (pM3/L1-3CGln);
lane 4, construct expressing 3CGln fused with the second LIM
domain of RBTN-2 (pM3/L2-3CGln); lane 5, construct
expressing 3CGln fused with both RBTN-2 LIM domains together
(pM3/L12-3CGln); lane 6, construct expressing the first LIM
domain of RBTN-2 (pM3/LIM1); lane 7, construct expressing the second LIM domain of RBTN-2 (pM3/LIM2).
[View Larger Version of this Image (54K GIF file)]
DISCUSSION
Most oncogenes activated by chromosomal translocations in
lymphocytic leukemias are transcription factors (2). Accumulated evidence suggests that RBTN-2 is involved in transcription regulation: (i) immunofluorescence studies show that RBTN-2 is predominantly nuclear in cells of hematopoietic lineages (7, 11); (ii) as an LIM-only
protein, RBTN-2 interacts with the transcription factors Tal-1 (12,
13), GATA-1 and GATA-2 (14), and retinoblastoma-binding protein-21; (iii) RBTN-2 fused to GBD activates
transcription (22).1 In this study, we have confirmed that
RBTN-2 functions as a transcription activator in both yeast and
mammalian systems. In addition, we have localized the NH2
terminus activation domain to a 19-amino acid region and identified a
second activation domain at the COOH terminus of RBTN-2. The
COOH-terminal activation domain, unlike the NH2 terminus
activation domain, functions in mammalian cells but not in yeast.
Furthermore, we have demonstrated that the LIM domains, currently
recognized as protein-protein interaction domains, also function as
repression domains. The presence of LIM domains result in the overall
low transcription activation activity of full-length RBTN-2 compared to
those of the individual activation domains at both termini.
Studies on the eukaryotic transcription factors indicate that, as
opposed to DNA-binding domains, the transcription activation domains of
these proteins are less well defined (29). However, based on primary
amino acid sequences, several classes of activation domains have been
loosely defined, e.g. acidic, proline-rich, glutamine-rich,
serine/threonine-rich, and recently identified isoleucine-rich domains
(30-32). But some activation domains do not fit into any of these
classes (33). In agreement with Sanchez-Garcia et al. (22),
we have found that the NH2 terminus region of RBTN-2 serves
as an activation domain in yeast, as well as in mammalian cells. In
addition, we have localized the activation domain to a 19-amino acid
stretch which displays the full transcription activation activity of
the NH2 terminus region. It has been suggested that an
8-amino acid region (residues 15-23), with homology to the acidic
activation domain of VP16 (34), may account for the transcription
activity of RBTN-2 (22). However, we found that the "VP16 homologous
sequence" in a deletion construct (RN14-23, Fig. 3) gave only
~40% of the total activation activity of the NH2
terminus domain. Thus, our data suggest that the VP16 homologous sequence contributes significantly but does not account for the total
transcription activity of the NH2 terminus activation
domain of RBTN-2. This notion is further supported by our observation that an 8-amino acid stretch (RN11-19, Fig. 3) gave ~60% of the total activation activity even though it lacked 4 of the 8 amino acids
constituting the VP16 homologous region.
We found that the aromatic amino acid proline seems to play an
important role in the transcription activity of the NH2
terminus activation domain. This conclusion is based on the following
observations: (i) there are only 4 proline residues in RBTN-2, but all
of them are present within this 19-amino acid activation domain; (ii) deletion of two consecutive prolines, Pro-24,25, from this region (RN1-23 and RN11-23, Fig. 3) resulted in an approximately 50% decrease in the transcription activity; (iii) the level of
transcription activation exhibited by the NH2 terminus
activation domain of RBTN-2 is similar to that seen in other
proline-rich domains of transcription factors, such as AP-2 (3-6-fold
activity over the background) (35, 36). These transcription factors
usually act in a TATA-proximal position and have considerably lower
activity compared to the transcription factors containing acidic-rich
domain (35, 36). However, further studies involving site-directed mutagenesis are required to determine whether or not proline residues play a critical role in the NH2-terminal activation domain
of RBTN-2.
We also discovered a second activation domain in the COOH terminus
region of RBTN-2 that was active in mammalian cells, but was silent in
yeast. This activation domain, comprised of 11 amino acids, does not
easily fit into any class of the activation domains, but it has four
isoleucine residues. Thus, the COOH-terminal region may represent
either a novel class or an isoleucine-rich activation domain (32). It
is noteworthy that the COOH-terminal activation domain is required for
the transactivation activity of the entire RBTN-2 protein. Removal of
the COOH terminus alone results in silencing of the NH2
terminus activation domain in mammalian cells (Fig. 4, lane
4).
The presence of two activation domains in RBTN-2 is not too surprising
since it is not unusual for eukaryotic transcription factors to have
multiple activation domains (37). For example, the HLH family member
E2A contains at least two separate activation domains; one functions
efficiently in a variety of mammalian cell lines, whereas the second
functions preferentially in pancreatic beta cell lines (38). In some
eukaryotic transcription factors, the situation is even more complex.
c-Fos has three activation domains in its COOH terminus which show weak
activity independently but act synergistically in combination (39, 40).
Recently, two additional activation domains and an inhibitory region
has been identified in NH2 terminus of c-Fos (39).
Multiple, regulatory domains in the eukaryotic transcription activation
factors, such as RBTN-2, may allow these proteins to respond to
different signals and/or endow them with multiple functions.
The two activation domains of RBTN-2 behave quite differently in that
the NH2-terminal one functions in both yeast and mammalian cells, whereas, the COOH-terminal one has activity only in mammalian cells. One possibility for this different behavior of activation domains is that it reflects the basic differences in the general transcriptional machinery between mammalian cells and yeast. Indeed, recent studies have shown that some activation domains, e.g.
the class of glutamine-rich domains such as those of SP1, AP2, Oct-1, Oct-2 (29, 31, 41), do not stimulate transcription in yeast S. cerevisiae, even when human TATA-binding protein or human-yeast hybrid TATA-binding protein is supplied (31). Thus, the COOH-terminal activation domain of RBTN-2 may target transcription factor(s) in
mammalian cells that are absent in yeast.
The distinct behaviors of the two separate activation domains of RBTN2
imply that each domain may have different function. This view is
consistent with the observations that RBTN-2 is a multifunctional
protein. RBTN-2 is required for erythropoiesis (11), and is involved in
T-cell leukemogenesis (8, 10). In addition, RBTN-2 is implicated in the
acute-phase response (7). In this context, it is noteworthy that RBTN-2
binds multiple protein partners, especially transcription factors
through its LIM domains (12-14).1 It is likely that each
function requires different partner(s) that may interact with the
distinct LIM domains of RBTN-2. Thus, the functions of RBTN-2 may
depend upon the relative availability of the protein partners, that in
turn may be influenced by the developmental stages, different tissue
distribution, or cellular environment. In this context, it will be
interesting to determine the relative activity of the two activation
domains in different tissues.
We found that the overall transcription activity of RBTN-2 was lower
than that of each individual activation domain, suggesting the presence
of a repressor domain in RBTN-2. The most obvious candidates for the
repressor effect are the LIM domains since, other than the
NH2 and COOH terminus activation domains, they virtually
constitute the remaining portion of RBTN-2. Indeed, our results show
that RBTN-2 LIM domains, either individually or in combination,
suppress the transcription induced by a heterologous activation domain
(the EBNA3C protein of the Epstein-Barr virus, Fig. 5). Since each LIM
domain can inhibit transcription activation independently, we consider
that RBTN-2 has two repressor domains. A similar "mix and match" of
protein domain approach has led various investigators to identify
repressor domains in different transcription factors such as WT1, eve,
en, c-Evb-A, and v-Evba (37, 42). These repressor domains are termed
"portable" or "transferable" because they function in the
context of heterologous activation and DNA-binding domains. Thus,
RBTN-2 possesses two portable repressor domains. These repressor
domains function in a position independent manner, i.e.
repression was seen when LIM domains were positioned either
amino-terminal (Fig. 5, lanes 3-5) or carboxyl-terminal (Fig. 4, lane 4) to activation domains. Despite this
observation, the COOH terminus activation domain is not repressed by
LIM domains (Fig. 2A, lane 4). Therefore, it is
important to note that in context of the whole RBTN-2 protein, the LIM
domains selectively repress the NH2 terminus activation
domain (Fig. 4, lane 4). The mechanism of this selective
repression is not known.
The selective repression of the NH2-terminal domain
provides a mechanism for differential activity of RBTN-2. It is
possible that repression of the NH2-terminal domain is
abrogated through binding LIM interacting proteins. Based on this
hypothesis, LIM interacting proteins would be present in yeast, but not
in COS cells, since the NH2-terminal domain is active in
yeast despite the presence of the LIM domains (Fig. 1). It is likely
that the NH2-terminal domain is also active in mammalian
cells. The unmasking of the NH2-terminal domain activity in
selective tissues, and/or during fetal development would be dependent
on expression of LIM interacting proteins in these tissues.
Tissue-specific unmasking of activation domains is known to occur,
e.g. an activation domain of E2A functions only in
pancreatic beta cells (38).
In summary, our study establishes that the primary cellular role of
T-cell oncogene, RBTN-2, is to serve as a transcription regulator. The
mapping of two distinct activation domains and two repression domains
suggest a complex behavior of RBTN-2 on transcription regulation. In
this context, RBTN-2 is similar to other complex, multifunctional
transcription regulatory proteins such as p53 (43), c-Fos (39), SRF
(44), and IRF (23), that possess multiple negative and positive
regulatory domains. The presence of multiple transcription regulatory
modules suggests that the overall activity of RBTN-2 depends on the
interplay among these activation and repression domains, as well as on
the differential binding of LIM domain to different target proteins
during fetal development and in different tissues.
FOOTNOTES
*
This work was supported in part by Cancer Center Support
CORE Grant P30 CA 21765, Grant CA 43277, from the National
Institutes of Health, and the American Lebanese Syrian Associated
Charities (ALSAC). The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
¶
To whom correspondence should be addressed: Dept. of Virology
and Molecular Biology, St. Jude Children's Research Hospital, 332 N. Lauderdale, Memphis, TN 38101. Tel.: 901-495-3400;
Fax: 901-523-2622.
1
Mao, S., Neale, G. A. M., Bram, R. J., and
Goorha, R. M. (1997) Leukemia, in press.
2
The abbreviations used are: PCR, polymerase
chain reaction; GBD, GAL4 DNA-binding domain; CAT, chloramphenicol
acetyltransferase.
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