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J Biol Chem, Vol. 273, Issue 18, 11062-11068, May 1, 1998
Syringomycin Action Gene SYR2 Is Essential for
Sphingolipid 4-Hydroxylation in Saccharomyces
cerevisiae*
Michelle M.
Grilley ,
Stephen D.
Stock ,
Robert C.
Dickson§,
Robert L.
Lester§, and
Jon Y.
Takemoto ¶
From the Department of Biology, Utah State
University, Logan, Utah 84322 and the § Department of
Biochemistry and the Lucille P. Markey Cancer Center, University of
Kentucky, Lexington, Kentucky 40536
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ABSTRACT |
The Saccharomyces cerevisiae gene
SYR2, necessary for growth inhibition by the cyclic
lipodepsipeptide syringomycin E, is shown to be required for
4-hydroxylation of long chain bases in sphingolipid biosynthesis. Four
lines of support for this conclusion are presented: (a) the
predicted Syr2p shows sequence similarity to diiron-binding membrane
enzymes involved in oxygen-dependent modifications of
hydrocarbon substrates, (b) yeast strains carrying a
disrupted SYR2 allele produced sphingoid long chain bases
lacking the 4-hydroxyl group present in wild type strains,
(c) 4-hydroxylase activity was increased in microsomes
prepared from a SYR2 overexpression strain, and
(d) the syringomycin E resistance phenotype of a
syr2 mutant strain was suppressed when grown under
conditions in which exogenous 4-hydroxysphingoid long chain bases were
incorporated into sphingolipids. The syr2 strain produced
wild type levels of sphingolipids, substantial levels of hydroxylated
very long chain fatty acids, and the full complement of normal yeast
sphingolipid head groups. These results show that the SYR2
gene is required for the 4-hydroxylation reaction of sphingolipid long
chain bases, that this hydroxylation is not essential for growth, and
that the 4-hydroxyl group of sphingolipids is necessary for
syringomycin E action on yeast.
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INTRODUCTION |
Syringomycin E is a member of a family of cyclic lipodepsipeptides
produced by strains of the plant bacterium Pseudomonas syringae pv. syringae (1). Traditionally regarded as a
virulence factor in a variety of bacterial necrotic diseases of plants
(2), syringomycin E and its analogs also possess antifungal properties, and it has been suggested that these metabolites are fungal antagonists that aid survival of the producing bacteria on plants (3, 4).
How these compounds produce their toxic effects is unknown, but past
physiological studies have shown that syringomycin E targets primarily
the plasma membrane (1, 5, 6). To further investigate the molecular
mechanisms of action of this bioactive compound, resistant mutants of
Saccharomyces cerevisiae were isolated to identify genes
that encode proteins necessary for growth inhibition by syringomycin E
(7). Several of the mutants were deficient in sterols, and one group
was complemented by the gene SYR1 (identical to
ERG3), which encodes sterol C-5,6 desaturase of the
ergosterol biosynthetic pathway (8). These findings, when combined with results from binding (9) and lipid bilayer (10) studies, indicate that
sterols influence the interaction of syringomycin E with the target
plasma membrane.
Syringomycin E action in yeast was more recently shown to require a
second, nonsterol biosynthetic gene, SYR2 (11).
SYR2 is identical to SUR2, which was identified
in a screen for mutants that suppress the impaired recovery of
rvs161 strains from nutritional starvation (12).
Syringomycin E-resistant syr2 mutants showed altered
glycerophospholipid levels, and the SYR2 gene product was
localized to the endoplasmic reticulum (11). Nevertheless, the precise
function of Syr2p was unclear from these studies.
In addition to sterols and glycerophospholipids, sphingolipids are
major lipid components of the plasma membrane (13). Ubiquitous in
eukaryotic cells, sphingolipids all possess a sphingoid long chain base
with mainly, in fungi and plants, a hydroxyl group at the C-4 position
(phytosphingosine) or, in animals, a double bond at the C-4,5 position
(sphingosine). Sphingolipids serve numerous roles, including mediating
cell-cell interactions, anchoring membrane proteins, acting as enzyme
co-factors (14), and serving as receptors for Escherichia
coli verotoxin (15-17). In addition, sphingolipids are becoming
recognized as significant players in the control of cell growth,
differentiation, and response to stress through the second messenger
action of sphingolipid metabolites sphingosine,
sphingosine-1-phosphate, and ceramide (18-20). Despite their
importance, numerous gaps remain in the knowledge of sphingolipid metabolism, including the nature of the enzymes directly responsible for phytoceramide or ceramide formation from the presumed
immediate precursor dihydroceramide (Fig.
1) (21).

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Fig. 1.
Sphingolipid biosynthesis in S. cerevisiae. Shown is the likely pathway for de
novo sphingolipid biosynthesis in yeast, along with the genes,
when known, involved at each step. The two possible pathways for long
chain base 4-hydroxylation, proposed to be catalyzed by Syr2p, and long
chain base acylation are shown. Hydroxylation of the very long fatty
acid chain is thought to occur at some point after acylation. Very long
fatty acid chains of 24 and 26 carbon length and with zero, one, or two
hydroxyl groups have been reported in S. cerevisiae (39).
The predominant monohydroxy-C-26 fatty acid is pictured. R
can be phosphoinositol, phosphoinositol-mannose, or
diphosphoinositol-mannose. AUR1 is necessary for inositol
phosphorylceramide synthase activity (26), whereas
SYR4/IPT1 catalyzes addition of the terminal
phosphoinositol (Ref. 57 and S. D. Stock, J. A. Radding,
D. A. Young, and J. Y. Takemoto, unpublished results).
Additional genes involved in head group assembly have not yet been
identified.
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In this report we present evidence that S. cerevisiae SYR2
is required for 4-hydroxylation of sphingoid bases and that this activity is necessary for syringomycin E action. We show that strains
mutant in SYR2 produce sphingolipids missing the hydroxyl group at the C-4 position of the long chain base moiety, that supplying
such cells with C-4 hydroxylated long chain base suppresses the
syringomycin E-resistant phenotype of syr2 strains, and that strains that overexpress Syr2p are enriched in 4-hydroxylase
activity.
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EXPERIMENTAL PROCEDURES |
Yeast Strains and Growth Conditions--
Yeast strains used in
this study are listed in Table I. Yeast
were grown at 28-30 °C with shaking. YPD, SC-ura, SG-ura (as SC-ura
with glucose replaced by galactose), and SC-trp were as described by
Kaiser et al. (22). The lcb1 mutants were grown in modified YPD (1% yeast extract, 1% peptone, 4% glucose, 50 mM sodium succinate, pH 5.0, 0.05% Tergitol (U. S.
Biochemical Corp.), 25-50 µM phytosphingosine·HCl
(PHS)1 or
DL-erythro-dihydrosphingosine (DHS) (both from
Sigma) or synthetic medium as described by Pinto et al. (23)
minus either uracil or tryptophan. Stock solutions (100 mM)
of PHS and DHS in 95% ethanol were diluted into 0.5% Tergitol and
then added to the media to yield the indicated final long chain base
and Tergitol concentrations.
Long Chain Base Analysis--
Yeast were grown in YPD and
harvested at 1.5 × 108 cells/ml. Methanol-HCl
hydrolysates of wild type (W303C and KZ1-1C) and syr2 cells
(W SYR2 and 13N-F2), as well as C-18 DHS and C-18 PHS
standards were derivatized with the UV-absorbing 4-biphenylcarbonyl chloride by the method of Jungalwala et al. (24) as adapted by Dickson et al. (25). Samples were resolved by HPLC on a
250 × 4.6-mm Alltech Econosil C18 column with a 10-mm guard
column. Elution was isocratic with methanol/water (90:10, v/v) as the solvent at a flow rate of 1.0 ml/min. Effluent was monitored by absorbance at 280 nm. Electrospray ionization mass spectrometry was
performed by the Utah State University Biotechnology Center.
Sphingolipid Analysis--
W303C and W SYR2
cells were inoculated to 5 × 106 cells/ml in modified
YPD containing 0.5 mCi of [3H]inositol (New England
Nuclear Co., 20 mCi/µmol) or 0.5 mCi of [4,5-3H]DHS
(2.56 mCi/µmol) derived by hydrolysis of
[3H]N-acetyl-DHS prepared as described
previously (26). After culture for 18 h at 30 °C the cells
reached a density of 1.9-2.4 × 108 cells/ml, and the
reaction was stopped by adding trichloroacetic acid to a final
concentration of 5%. The cells were processed to deacylate the ester
lipids followed by extraction of the sphingolipids as described
previously (27). To further purify the acidic sphingolipids, the
sphingolipid extract was bound to and eluted from AG4 resin (Bio-Rad)
as described previously (28). The AG4 eluate was dried, dissolved in 1 ml of chloroform/methanol/water (16:16:5, v/v/v), and 3-7-µl
aliquots were subjected to thin layer chromatography on 20-cm silica
gel plates (Whatman HP-K) with the solvent chloroform/methanol/4.2 N aqueous NH4OH (9:7:2, v/v/v). Each lane
contained a mixture of yeast PHS-containing sphingolipids: 2 nmol each
of inositolphosphoryl ceramide (IPC) and mannosylinositolphosphoryl
ceramide (MIPC) species containing mono- and di-OH fatty acids and
mannosyl-di(inositolphosphoryl) ceramide (M(IP)2C) with a
mono-OH fatty acid. Radioactivity was measured with a BioScan
apparatus. The standards were located by charring after spraying with
10% (w/v) CuSO4·5H2O in 8%
H3PO4 followed by heating at 160 °C for 30 min (29). The mannosylated sphingolipids in the deacylated lipid
extract were also detected after thin layer chromatography of larger
aliquots (125 µl) on 20-cm Whatman K5 plates developed with the same
solvent as above. The plate was first treated with orcinol reagent (30)
to detect the carbohydrate containing sphingolipids, MIPC and
M(IP)2C, and then treated with the
CuSO4/phosphoric acid reagent as above.
To examine the nature of the long chain bases in the sphingolipid
fractions, a portion of the [4,5-3H]DHS-labeled AG4
eluates were dried and hydrolyzed in 1 N HCl in
methanol/water (82:18) at 80 °C for 18 h. The hydrolysates were
dried, dissolved in chloroform/methanol/water (16:16:5, v/v/v), and
spotted on Whatman LK5 plates along with 20 nmol of PHS and DHS
standards in each lane. The plates were developed with
chloroform/methanol/2 N aqueous NH4OH
(40:10:1). Radioactivity was measured with a BioScan apparatus followed
by detection of the standards with ninhydrin reagent.
Fatty Acid Analysis--
Fatty acids from an acidic sphingolipid
fraction (prepared as described above without the addition of
radioisotopes) or whole cells were liberated by saponification and
converted to UV-absorbing phenacyl derivatives that were resolved and
quantitated by reverse phase HPLC as described previously (25).
Assay of 4-Hydroxylase Activity--
The previously constructed
SYR2 overexpression plasmid, pYSYR2, placed a
5'-truncated SYR2 gene under the control of the
galactose-inducible promoter GAL1 (11). For this work the
truncated SYR2 insert was removed and replaced with an
AccI-SphI fragment containing the entire
SYR2 coding region. Expression of Syr2p from this construct, pYSYR2a, was confirmed by observation of galactose-inducible
complementation of syringomycin E resistance of a syr2
strain.
W303C containing pYSYR2a or the control plasmid pYES2 was
grown overnight in SC-ura. Cells were washed with sterile water and
diluted into 300 ml of SG-ura (8 × 106 cells/ml) to
induce Syr2p expression. Cells were harvested after an additional
16 h of growth and washed with water. W SYR2 cells were grown similarly except the medium was SC-ura at each step. Microsome preparation was modified from published procedures (31). The
washed cell pellet was resuspended in 25 ml of 100 mM
Tris-sulfate, pH 9.4, 10 mM dithiothreitol and incubated at
room temperature 15 min, followed by a wash with 10 mM
Tris-HCl, pH 7.5, 0.6 M sorbitol, 0.1 mM
dithiothreitol, 0.1 mM EDTA. Cells were then incubated
1 h at 30 °C in 7.5 ml of 10 mM Tris-HCl, pH 7.5, 2 M sorbitol, 0.1 mM dithiothreitol, 0.1 mM EDTA, 0.1 mg/ml Zymolyase 100T (Seikagaku Corp., Tokyo).
After washing with 10 mM Tris-HCl, pH 7.5, 2 M
sorbitol, cells were disrupted with glass beads in 1 ml of cold 10 mM Tris-HCl, pH 7.5, 0.65 M sorbitol, 0.1 mM phenylmethylsulfonyl fluoride, 1 µg/ml leupeptin, 1 µg/ml pepstatin. Glass beads and cell debris were removed by
centrifugation. Microsomal membranes were collected by centrifugation
at 4 °C for 90 min at 100,000 × g. Pellets were
homogenized in 0.6 ml of cold 10 mM Tris, pH 7.5, 20%
glycerol. Protein concentrations of the microsomal preparations were
determined using Pierce Coomassie protein assay reagent with bovine
serum albumin as standard.
To assay 4-hydroxylase activity, 50 nmol of either DHS or
dihydroceramide in chloroform was dried in a stream of nitrogen and
then resuspended by sonication in 0.1 ml 0.3% CHAPS. This was combined
with 0.1 ml of 100 mM Tris-HCl, pH 7.5, 0.2 mM
NADPH, 0.2 mM NADH, and microsomes (0.7 mg of protein) to
initiate the reaction. Incubation was at 25 °C for 90 min, followed
by methanol-HCl hydrolysis, 4-biphenylcarbonyl chloride derivatization,
and reverse phase HPLC analysis of long chain bases as described above.
Chromatographs were integrated using Beckman System Gold Nouveau
software.
Construction of lcb1 Disruptant Strains--
A disrupted
LCB1 allele, lcb1- 3, was constructed by
replacing in pTZ18-LCB1 (32), a 1.5-kilobase pair
SalI/BamHI fragment that contains the C-terminal
80% of the LCB1 gene, with a 1.4-kilobase pair
TRP1-containing fragment to yield plasmid
pLCB1- 3. Plasmids were propagated in E. coli
DH5 . 3 µg of pLCB1- 3 were digested with restriction
endonuclease NdeI, the fragments were separated on a 0.8%
agarose gel, and the 3.1-kilobase pair fragment containing the
lcb1- 3 allele was isolated using an Elu-Quik DNA
Purification Kit as directed by the manufacturer (Schleicher & Schuell). The DNA fragment was transformed into diploid strain W303-1A
by electroporation and plated onto SC-trp medium. Trp+
colonies were isolated and sporulated, and the resultant tetrads were
dissected onto modified YPD plates containing 25 µM PHS. One Trp+ long chain base auxotrophic colony was selected
and designated W LCB1. Replacement of the LCB1
allele with lcb1- 3 was confirmed by Southern blotting
using enhanced chemiluminescence detection (Amersham Pharmacia
Biotech). The double disruptant, W LCB1 SYR2, was produced by crossing W LCB1 with
W SYR2a and selecting for Trp+
Ura+ long chain base auxotroph progeny. Standard genetic
procedures were as described by Kaiser et al. (22).
Syringomycin E
Treatment--
W LCB1 SYR2 cells were grown
overnight in modified YPD containing either 50 µM DHS or
50 µM PHS. W SYR2 and W303C were grown in
modified YPD with no long chain base addition. Cells were washed once
with sterile water and then transferred to modified YPD minus Tergitol
and long chain base and with the indicated amounts of syringomycin E,
prepared as described previously (33). Final cell densities were
A600 = 0.2 as measured in a Shimadzu UV-1201 spectrophotometer (1 A600 unit equals
approximately 3.7 × 107 cells/ml). Incubation was
continued at 28 °C. After 1 h Tergitol was restored to 0.05%,
and DHS or PHS was restored to 50 µM as appropriate to
prevent starvation for long chain base. Syringomycin E was found to be
ineffective if added directly to medium containing working
concentrations of Tergitol and long chain base. 16 h after syringomycin E addition, aliquots were removed and diluted 10-fold to
measure growth by turbidity at A600.
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RESULTS |
Sequence Analysis Suggests That Syr2p Is a Diiron Binding Lipid
Hydroxylase or Desaturase--
BLAST algorithm (34) comparisons of the
deduced amino acid sequence of Syr2p with those in protein data bases
showed significant similarities to endoplasmic reticulum proteins
associated with lipid metabolism. In particular, close similarities
were found with S. cerevisiae SYR1/ERG3 (C-5
sterol desaturase, score 51, p = 0.0098, 33%
identities, 56% positives), Arabidopsis thaliana ERG3 (C-5
sterol desaturase, score 77, p = 0.014, 44%
identities, 68% positives), and yeast ERG25 (C-4 sterol
methyl oxidase, score 65, p = 4.5 × 10 8, 52% identities, 65% positives). Similar findings
were reported by Bard et al. (35) and Li and Kaplan (36).
Despite the similarity of Syr2p to enzymes of sterol biosynthesis, an
involvement for Syr2p in sterol metabolism could not be found.
Comparisons of sterol profiles of syr2 mutants with
similarly grown wild type strains revealed no differences
(11),2 indicating that Syr2p
functions in some other metabolic pathway.
Sequence comparisons also pointed to the occurrence in Syr2p of an
eight-histidine motif grouped into three characteristic clusters (Fig.
2). Shanklin et al. (37) have
recently reported that 75 proteins of known function contain this
eight-histidine motif, which is thought to bind a catalytically active
diiron cluster. Of these proteins, 66 are integral membrane proteins. All 66 catalyze 1 of 11 distinct O2-dependent
modifications of hydrocarbon substrates, acting as either desaturases,
hydroxylases, oxidases, or decarbonylases (37). Syr2p contains the
eight-histidine motif and, based on sequence analysis and subcellular
fractionation studies, is an integral membrane protein (11) and thus
was predicted to also catalyze an O2-dependent
modification of a hydrocarbon substrate. Because SYR2 did
not appear to play a role in sterol biosynthesis and also differed from
the yeast gene, OLE1, required for glyceride fatty acid
desaturation (38), we were prompted to investigate the potential
involvement of SYR2 in sphingolipid synthesis. In the yeast
sphingolipid biosynthetic pathway (Fig. 1), two uncharacterized
processes were deemed potential candidates for catalysis by
eight-histidine motif hydroxylases: C-4 hydroxylation of the sphingoid
long chain base portion of the sphingolipid and hydroxylation of the
very long chain fatty acid.

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Fig. 2.
Putative metal binding domains of Syr2p and
similarity to sterol biosynthetic enzymes. The sequences were
obtained as part of a BLAST analysis and are from S. cerevisiae (S.c.) or A. thaliana
(A.t.). Histidine residues identified by Shanklin et
al. (58) as being involved in metal binding are indicated in
bold type. Histidine residues identified by Li and Kaplan
(36) as a fourth histidine cluster motif specific to the
ERG3/ERG25/SYR2 family of sequences
are underlined.
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Yeast Strains Deficient in SYR2 Lack the Sphingoid Long Chain Base
Phytosphingosine--
Sphingolipids in yeast are normally composed of
the sphingoid long chain base PHS (D-4-hydroxysphinganine),
typically of 18 or 20 carbon chain length (C-18 and C-20,
respectively), an amide-linked very long chain fatty acid, primarily
mono-hydroxy-C-26 chains with lesser amounts of di- and nonhydroxyl
forms, and a phosphoinositol-containing head group (39) (Fig. 1). To
test the involvement of Syr2p in the sphingoid base 4-hydroxylation,
the sphingoid base compositions of mutant strain W syr2
and the isogenic wild type strain W303C were determined (25). Reverse
phase HPLC separation of biphenylcarbonyl-derivatized long chain bases
derived from the wild type strain W303C revealed two peaks of
UV-absorbing material, as expected, with retention times of 15 and 25 min (Fig. 3B). Coelution with
a derivatized C-18 PHS standard and electrospray mass spectral analysis
of the material collected from the two peaks verified their identities as C-18 PHS at 15 min and mainly C-20 PHS at 25 min. The derivatized long chain bases from the syr2 mutant strain also
separated into two peaks, with one again eluting at 25 min but the
other eluting at 42 min (Fig. 3C). Little material with a
retention time of 15 min was apparent (<0.3% of total long chain
base). Authentic C-18 DHS treated in the same manner as the lipid
extracts eluted with a retention time of 25 min (Fig. 3A).
It was not possible to distinguish between the C-20 PHS and C-18 DHS
derivatives by the chromatography system used, but mass spectral
analysis of the syr2 material eluting at 25 min revealed
a molecular ion mass of 482.3 Da, consistent with its assignment as the
N-biphenylcarbonyl derivative of C-18 DHS. The mass of the
material eluting at 42 min was 510.4 Da, as expected for
N-biphenylcarbonyl-C-20 DHS. Similar results were obtained
with an independently isolated syr2 mutant strain in a
different genetic background (13N-F2 (syr2) and KZ1-1C
(SYR2); data not shown).

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Fig. 3.
Sphingoid long chain bases produced by wild
type and syr2 strains. Methanol-HCl hydrolysates of
wild type strain W303 (B) and W syr2 cells
(C), as well as C-18 DHS and C-18 PHS standards
(A), were derivatized with the UV-absorbing
4-biphenylcarbonyl chloride and resolved by reverse phase HPLC as
described under "Experimental Procedures." Effluent was monitored
by absorbance at 280 nm.
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Thin layer chromatography of acid-hydrolyzed, radiolabeled
sphingolipids from syr2 and wild type cells confirmed
that the wild type produced sphingolipids containing primarily PHS
(85%) with 15% DHS, whereas the syr2 mutant produced
solely DHS (data not shown). We conclude from these data that Syr2p is
necessary for the 4-hydroxylation of the DHS component of yeast
sphingolipids. These results are consistent with Syr2p functioning as
dihydroceramide or DHS hydroxylase.
Fatty Acid Analysis of syr2 Strain--
The effect of the
syr2 mutation on hydroxylation of the very long chain fatty
acid component of sphingolipids was also examined as described under
"Experimental Procedures." Hydroxylation of the very long chain
fatty acids was observed in the absence of Syr2p activity. For example,
the percentage of distribution of non-, mono-, and di-hydroxyl fatty
acids for wild type cells was 8, 78, and 14%, respectively, and for
syr2 cells, it was 53, 47, and 0%, respectively. Clearly
syr2 cells hydroxylate the very long chain fatty acid in
sphingolipids. Why the distribution of hydroxylated species differs
from wild type is not known.
In Vitro Measurement of 4-Hydroxylase Activity--
Sphingoid base
4-hydroxylase activity was measured in microsomal fractions, because
Syr2p has previously been localized to the endoplasmic reticulum (11).
Microsomes, prepared from SYR2 wild type, overexpression,
and deletion strains, were supplied with substrate, either DHS or
dihydroceramide solubilized in CHAPS, along with NADH and NADPH. Both
NADH and NADPH have been reported to be cofactors for activity of other
putative diiron proteins involved in oxygen-dependent
reactions of hydrocarbon substrates. After 90 min at 25 °C,
sphingoid long chain bases were released by methanol-HCl hydrolysis and
extracted, and their 4-biphenylcarbonyl derivatives were separated and
quantitated by reverse phase HPLC. Hydroxylated product was apparent
when DHS or dihydroceramide were supplied to microsomes from a
SYR2 overexpressing strain, W303C(pYSYR2a). Using
the same amount of protein, 3-4-fold less hydroxylated product was
produced if NADH and NADPH were omitted from the reaction or if the
source of microsomes was a wild type strain, W303C(pYES2), containing
only the chromosomal copy of SYR2 and a control plasmid
(Table II). No 4-hydroxyl products were
detected if microsomes were from the deletion strain
W syr2 .
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Table II
In vitro 4-hydroxylase activity
Microsomes were prepared from the indicated strains, then incubated
with either 50 nmol DHS or dihydroceramide with or without 0.1 mM each NADH and NADPH. Sphingoid long chain bases were
treated with methanol-HCl, extracted, derivatized, and analyzed by
reverse phase HPLC as described under "Experimental Procedures."
Values are the averages of two to three trials with standard deviations
for 90-min reactions containing 0.7 mg of microsomal protein. ND, none
detected. , not measured.
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Growth in the Presence of PHS Suppresses the syr2
Phenotype--
To confirm that the syringomycin E resistance phenotype
of the syr2 mutant is due to a loss of hydroxylase activity
rather than an additional unknown activity of Syr2p, we wished to test whether syringomycin E sensitivity is restored by supplying
syr2 cells with the product of the hydroxylase. It is still
uncertain, however, if the hydroxylase substrate is phytoceramide, PHS,
or both (see "Discussion"). As yeast do not readily utilize
exogenous ceramides but will incorporate exogenous sphingoid long chain bases into the sphingolipid biosynthetic pathway (40), syringomycin E
sensitivity was tested following growth in medium containing hydroxylated (PHS) or nonhydroxylated (DHS) long chain bases rather than hydroxylated or nonhydroxylated ceramides. Also, to ensure that all sphingolipids were built on the exogenous long chain base, the
LCB1 gene was deleted in strain W syr2a
(see "Experimental Procedures"). LCB1 encodes a subunit
of serine palmitoyltransferase, the first enzyme in sphingolipid
biosynthesis (Fig. 1). An lcb1 mutation results in
auxotrophy for long chain bases (32).
The syr2 lcb1 double mutant was grown
several generations in medium containing either DHS or PHS to ensure
that sphingolipids lacked or contained phytoceramide, respectively.
Each culture was diluted into fresh medium and then challenged with
increasing concentrations of syringomycin E. The effectiveness of
syringomycin E was assessed after an additional 16 h of growth.
For the syr2 lcb1 strain, syringomycin E
had no noticeable effect on growth of the DHS-containing cultures. The
PHS-containing cultures, on the other hand, showed essentially no
growth at syringomycin E concentrations of 1 µg/ml and higher (Fig.
4). These results, with the
syr2 lcb1 strain supplemented with either
DHS or PHS, mimicked those obtained upon syringomycin E treatment of
syr2 and SYR2 strains, respectively (Fig. 4).
Further, an isogenic SYR2 lcb1 strain, which
retains Syr2p function, also retained its syringomycin E sensitivity
whether supplied with DHS or PHS in the growth medium (not shown).
Thus, the syr2 lcb1 strain was restored to
the wild type syringomycin E-sensitive phenotype by supplying it with
hydroxylated long chain base, and the difference between
syr2 lcb1 cultures grown on PHS or DHS was
dependent on a lack of Syr2p function. These results support the
conclusion that Syr2p functions as a 4-hydroxylase and indicate that
this hydroxylation is essential for syringomycin E action.

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Fig. 4.
Effect of PHS and DHS on the syringomycin E
resistance syr2 phenotype.
W LCB1 SYR2, cultured in the presence of
either PHS ( ) or DHS ( ), W303C ( ) and W SYR2
( ) cells were diluted into medium with the indicated amounts of
syringomycin E. Syringomycin E resistance, as measured by cell growth
(turbidity (O.D.600)), was evaluated 16 h after
syringomycin E addition. The example shown is representative of three
independent experiments.
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Sphingolipid Analysis of syr2 Strain--
The fact that
syr2 mutants are viable, whereas sphingolipids are
essential, raised questions about the mutant lipid composition. The
loss of long chain base hydroxylation could result in the simple
substitution of nonhydroxylated long chain base for 4-hydroxy-long chain base in the sphingolipid pools or, alternatively, in an alteration of the overall levels or types of sphingolipids. The recovery of similar quantities of long chain base from mutant and wild
type strains (Fig. 3) would argue against a large change in total
sphingolipid content, but in order to more directly investigate the
quantity and nature of sphingolipids produced by the syr2 mutant, wild type and syr2 cells were cultured overnight
with either [3H]inositol or [3H]DHS to
label the sphingolipids. The cells were processed to deacylate the
ester lipids, such as phosphatidylinositol (PI), and sphingolipids were
extracted. Based on the radioactivities of
[3H]inositol-labeled extracts before and after PI
deacylation, the distribution and amounts of PI and inositol
sphingolipids were about the same in wild type (25.7 × 106 cpm PI, 15.3 × 106 cpm sphingolipid)
and syr2 cells (30.6 × 106 cpm PI,
14.4 × 106 cpm sphingolipid), confirming that the
mutant strain was able to make as much total sphingolipid as the wild
type.
The sphingolipid extracts were further purified by binding to and
elution from AG4 resin. Thin layer chromatography was carried out on
the final preparations, and the results for the
[3H]DHS-labeled preparations are shown in Fig.
5. The upper trace (Fig. 5)
from wild type cells shows the location of PHS-containing sphingolipid
standards, which are coincident with the radiolabeled sphingolipids.
These include species G and H, which are IPCs, with mono- and
dihydroxylated fatty acids, respectively; species I and J, which are
MIPCs, with mono-and dihydroxylated fatty acids, respectively; and
species K, which is M(IP)2C with a monohydroxyfatty acid.
The sphingolipid preparation from the syr2 mutant strain (Fig. 5, lower trace) shows peaks that are displaced to
higher RF values for which we propose the following
compositions, all containing DHS instead of PHS: A and B, IPCs with
non- and mono-hydroxylated fatty acids, respectively; C and D, MIPCs
with non- and mono-hydroxylated fatty acids, respectively; E and F,
M(IP)2Cs with non- and mono-hydroxylated fatty acids,
respectively.

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Fig. 5.
Thin layer chromatography of sphingolipids
obtained by in vivo labeling of wild type and syr2
cells with [3H]DHS. Wild type W303C and
W syr2 cells were grown in the presence of
[4,5-3H]DHS and then processed to deacylate the ester
lipids, followed by extraction and purification of the sphingolipids as
described under "Experimental Procedures." Samples were subjected
to thin layer chromatography on 20-cm silica gel plates (Whatman HP-K)
with the solvent chloroform/methanol/4.2 N aqueous
NH4OH (9:7:2, v/v). Each lane contained a mixture of yeast
PHS-containing sphingolipids: 2 nmol each of IPC and MIPC species
containing mono- and di-OH fatty acids and M(IP)2C with a
mono-OH fatty acid. The standards were located by charring after
spraying with 10% (w/v) CuSO4·5H2O in 8%
H3PO4 followed by heating at 160 °C for 30 min (29). The radioactivity was evaluated with a BioScan apparatus
(solid line, wild type; dotted line, mutant). The
upper curve was displaced upward by 1500 counts for display
purposes. G, H, I, J, and
K refer to the locations of an unlabeled mixture of yeast
PHS containing sphingolipids added to each lane and detected by
charring. G and H, IPCs with mono- and di-OH
fatty acids, respectively; I and J, MIPCs with
mono- and di-OH fatty acids, respectively; K,
M(IP)2C with a mono-OH fatty acid. A,
B, C, D, E, and
F are the locations of peaks in the mutant strain, all with
DHS. A and B, IPCs with zero and mono-OH fatty
acid, respectively; C and D, MIPCs with zero and
mono-OH fatty acid, respectively; E and F,
M(IP)2Cs with zero and mono-OH fatty acid,
respectively.
|
|
Several lines of evidence support these assignments. First, the results
obtained with the [3H]inositol-labeled sphingolipid
extracts (not shown) are identical to those obtained with
[3H]DHS labeling (Fig. 5), showing that the lower trace
in Fig. 5 consists of inositol-labeled sphingolipids. Second, as stated above, analysis of the HCl-methanol hydrolysate of the sphingolipid preparation from the mutant strain exhibits only DHS, not PHS, whereas
the wild type shows mainly PHS and some DHS. Finally, when the
sphingolipid preparations from unlabeled cells are subjected to thin
layer chromatography followed by staining for mannose by spraying with
orcinol-sulfuric acid, the mutant exhibits orcinol positive lipids in
the locations of species C and D; species E and F, which are located at
higher RF values than the orcinol-positive spots in wild
type cells; species I and J (MIPCs); and species K
(M(IP)2Cs). This result is consistent with the conclusions
that species C and D and species E and F are MIPC and
M(IP)2C species, respectively. We conclude that the
syr2 cells make sphingolipids with head groups similar to
those found in wild type cells but that their ceramide moieties contain
only DHS and no PHS.
 |
DISCUSSION |
The present study of yeast gene SYR2 reveals that
sphingolipids play a key role in the action of the antifungal
syringomycin E. It also uncovers a previously uncharacterized activity
of the sphingolipid biosynthetic pathway. The lack of PHS-based
sphingolipids and accumulation of DHS-based sphingolipids in
syringomycin E-resistant syr2 mutants, the greater
4-hydroxylase activity in a SYR2 overexpression strain, the
lack of activity in a syr2 mutant strain, and the ability to
bypass the syr2 defect with exogenously added PHS provide support for a biosynthetic role of Syr2p in 4-hydroxylation of sphingoid bases. In addition, the sequence similarity of Syr2p to
membrane hydroxylases and desaturases and its localization in the
endoplasmic reticulum (11), the site of early sphingolipid biosynthetic
steps (41), suggest that Syr2p is the enzyme that catalyzes this
specific hydroxylation step. An essential catalytic role in fatty acid
hydroxylation is not likely because very long chain fatty acid
hydroxylation was still detected in the syr2 mutant despite
a complete loss of SYR2 transcripts (11). While this report
was in preparation, Haak et al. (42) reported that an
independent sur2/syr2 mutant produces
sphingolipids lacking long chain base 4-hydroxylation, whereas a second
gene product, Scs7p, is required for sphingolipid very long chain fatty
acid hydroxylation.
Identification of Syr2p as the sphingolipid 4-hydroxylase will pave the
way for isolation and characterization of the enzyme. This will, in
turn, permit clarification of several issues regarding sphingolipid
biosynthesis. One important question concerns the identity of the lipid
substrate of Syr2p. The analogous reaction in animal cells,
desaturation at the C-4 position, is thought to occur at the level of
dihydroceramide (43). In yeast, however, it is not known if
4-hydroxylation occurs before or after long chain base acylation,
i.e. if Syr2p converts DHS to PHS, dihydroceramide to
phytoceramide, or both (Fig. 1). Inhibition of ceramide synthesis leads
to accumulation of both DHS and PHS (44, 45), suggesting a direct
conversion from DHS to PHS is possible, at least under conditions of
limited ceramide formation. We have shown that incubation of either DHS
or dihydroceramide with microsomes from a SYR2
overexpressing strain leads to hydroxylation. With crude microsome
preparations, however, enzymes capable of catalyzing acylation or
deacylation of the added substrate before hydroxylation may be
present and obscure the true nature of the substrate.
Confirmation that Syr2p is in fact an iron-containing oxidative enzyme
as predicted from the sequence (Fig. 2) will also be afforded by
biochemical analysis. The stimulation of 4-hydroxylase activity by
reduced pyridine nucleotide, as shown here, is consistent with Syr2p
being a member of this enzyme family. Molecular oxygen has been shown
to be the main source of oxygen added to dihydroceramide (46), but
little else is known of the mechanism of this reaction. Knowledge about
Syr2p will also reveal mechanisms about mammalian sphingolipid
biosynthesis. Phytoceramide is produced by certain mammalian tissues
(47) as well as by fungi and plants, and these tissues are predicted to
contain a Syr2p homolog. The primary mammalian sphingolipids based on
ceramide contain the long chain base sphingosine, which has a C-4,5
double bond rather than the 4-hydroxyl group. Recent reports concerning
the enzyme in rats that catalyzes this reaction, dihydroceramide
desaturase, suggest it also has properties similar to diiron-containing
lipid desaturases and hydroxylases (43, 48).
How sphingolipids, and more specifically sphingolipid 4-hydroxylation,
allow susceptibility to syringomycin E can only be speculated. One
possibility is that 4-hydroxylated sphingolipids directly bind this
antifungal compound at the cell surface. The 4-hydroxyl group is
expected to influence the degree of sphingolipid exposure on the
membrane surface, but it will also affect lipid and protein nearest
neighbor interactions in the plane of the membrane. Another possibility
is that 4-hydroxylated sphingolipids indirectly influence
syringomycin E-cell interaction by modulating sterol or
glycerophospholipid compositions or both. Syringomycin E action is
influenced by sterols (8, 10), phospholipid bilayers facilitate ion
channel formation by syringomycin E molecules (49), and syr2
mutants have lowered cellular glycerophospholipid levels (11). Despite
evidence for cross-regulation of the biosynthetic pathways of these
various lipid classes in yeast (50), it is difficult to predict
precisely how an alteration in the hydroxylation state of sphingolipids
could influence cellular sterol and phospholipid composition.
Furthermore, 4-hydroxylation could influence the insertion and assembly
of lipids as well as proteins into the plasma membrane. Finally, the
requirement for sphingolipid 4-hydroxylation may reflect the
involvement of phytoceramide-mediated growth inhibition processes in
syringomycin E action. Phytoceramide and ceramide, but not
dihydroceramide, are reported to mediate cell death in animal cells and
growth inhibition in yeast (18, 51, 52), although the phenomenon is not
always observed (53). Exposure of yeast cells to syringomycin E may
cause increased cellular levels of phytoceramide (perhaps by activating
sphingolipid turnover), which in turn may activate specific protein
kinases and phosphatases (18, 51, 52), leading to growth arrest.
Without the ability to hydroxylate dihydroceramide to phytoceramide
and the consequent substitution of dihydroceramide into mature
sphingolipids, syr2 mutants would be incapable of undergoing
this process.
The observation that SYR2 encodes a nonessential function
raises questions about the cellular roles of 4-hydroxylated
sphingolipids in yeast growth and survival. Normal SYR2
strains produce sphingolipids that are based almost exclusively on
phytoceramide (this study and Ref. 54), but syr2 mutants
grow well with dihydroceramide-based sphingolipids. Sphingolipids are
indicated to be required for maintaining proton permeability barriers
across the membrane or for proton extrusion (55) and for maturation of
glycosylphosphatidylinositol-anchored proteins (56). Preliminary
observations, however, show that syr2 mutants display wild
type growth phenotypes under conditions where proper functioning of
these processes may be essential, namely at acidic pHs (4.1), high
temperatures (39 °C), and high salt concentrations (0.75 M NaCl).3 Also,
Calcofluor staining of chitin, a probe of cell wall structure, was
unperturbed in the syr2 mutant, although growth of the
syr2 mutant was slightly retarded by
Calcofluor.4 The two
phenotypes previously associated with syr2/sur2
mutations, resistance to syringomycin E, and suppression of
rvs161 mutations can now be said to be associated with a
loss of 4-hydroxylation of the long chain base moiety of sphingolipids.
The only apparent commonality of these two phenotypes is growth
restoration under conditions that inhibit growth of wild type cells.
The mechanism(s) responsible for these effects await elucidation, as
does a clear definition of the role of 4-hydroxy-sphingolipids in yeast
biology and syringomycin E action.
 |
ACKNOWLEDGEMENTS |
We thank Gerald Wells and Elizabeth Nagiec
for expert technical assistance.
 |
FOOTNOTES |
*
This work was supported by grants from Eli Lilly, the Utah
Agricultural Experiment Station Project 607, and the National Science Foundation Grant 9003398 (to J. Y. T.) and National Institutes of
Health Grant GM41302 (to R. C. D. and R. L. L.).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
This is Utah Agricultural Experiment Station Journal Paper 6022.
¶
To whom correspondence should be addressed: Dept. of Biology,
Utah State University, Logan, UT 84322-5305. Tel.: 435-797-1909; Fax:
435-797-1575; E-mail: takemoto{at}cc.usu.edu.
1
The abbreviations used are: PHS,
phytosphingosine; DHS, dihydrosphingosine; HPLC, high performance
liquid chromatography; IPC, inositolphosphoryl ceramide; MIPC,
mannosylinositolphosphoryl ceramide; M(IP)2C,
mannosyl-di(inositolphosphoryl) ceramide; PI, phosphatidylinositol;
CHAPS, 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonic acid.
2
L. Parks, S. Kelly, and M. Bard, personal
communications.
3
J. Y. Takemoto, unpublished results.
4
M. M. Grilley and J. Y. Takemoto,
unpublished results.
 |
REFERENCES |
-
Takemoto, J. Y.
(1992)
in
Bacterial Phytotoxin Syringomycin and Its Interaction with Host Membranes (Verma, D. S., ed), pp. 247-260, CRC Press, Boca Raton, FL
-
Gross, D.
(1991)
Annu. Rev. Phytopathol.
29,
247-278
-
Hrabak, E. M.,
and Willis, D. K.
(1993)
Mol. Plant-Microbe Interact.
6,
368-375
-
Adetuyi, F. C.,
Isogai, A.,
Giorgio, D. D.,
Ballio, A.,
and Takemoto, J. Y.
(1995)
FEMS Microbiol. Lett.
131,
63-67[CrossRef][Medline]
[Order article via Infotrieve]
-
Hutchison, M. L.,
Tester, M. A.,
and Gross, D. C.
(1995)
Mol. Plant-Microbe Interact.
8,
610-620[Medline]
[Order article via Infotrieve]
-
Zhang, L.,
and Takemoto, J. Y.
(1987)
Phytopathology
77,
297-303[CrossRef]
-
Takemoto, J. Y.,
Yu, Y.,
Stock, S. D.,
and Miyakawa, T.
(1993)
FEMS Lett.
114,
339-342[CrossRef]
-
Taguchi, N.,
Takano, Y.,
Julmanop, C.,
Wang, Y.,
Stock, S.,
Takemoto, J.,
and Miyakawa, T.
(1994)
Microbiology
140,
353-359[Abstract/Free Full Text]
-
Julmanop, C.,
Takano, Y.,
Takemoto, J. Y.,
and Miyakawa, T.
(1993)
J. Gen. Microbiol.
139,
2323-2327[Abstract/Free Full Text]
-
Feigin, A. M.,
Schagina, L. V.,
Takemoto, J. Y.,
Teeter, J. H.,
and Brand, J. G.
(1997)
Biochim. Biophys. Acta
1324,
102-110[Medline]
[Order article via Infotrieve]
-
Cliften, P.,
Wang, Y.,
Mochizuki, D.,
Miyakawa, T.,
Wangspa, R.,
Hughes, J.,
and Takemoto, J. Y.
(1996)
Microbiology
147,
477-484
-
Desfarges, L.,
Durrens, P.,
Jugelin, H.,
Cassagne, C.,
Bonneu, M.,
and Aigle, M.
(1993)
Yeast
9,
267-277[CrossRef][Medline]
[Order article via Infotrieve]
-
van der Rest, M. E.,
Kamminga, A. H.,
Nakano, A.,
Anraku, Y.,
Poolman, B.,
and Konings, W. N.
(1995)
Microbiol. Rev.
59,
304-322[Abstract/Free Full Text]
-
Hannun, Y. A.,
and Bell, R. M.
(1989)
Science
243,
500-507[Abstract/Free Full Text]
-
Fishman, P. H.,
Pacuszka, T.,
and Orlandi, P. A.
(1993)
Adv. Lipid. Res.
25,
165-187[Medline]
[Order article via Infotrieve]
-
Lingwood, C. A.
(1993)
Adv. Lipid Res.
25,
189-211[Medline]
[Order article via Infotrieve]
-
Lingwood, C. A.
(1996)
Trends Microbiol.
4,
147-153[CrossRef][Medline]
[Order article via Infotrieve]
-
Hannun, Y. A.
(1996)
Science
274,
1855-1859[Abstract/Free Full Text]
-
Dickson, R. C.,
Nagiec, E. E.,
Skrzypek, M.,
Tillman, P.,
Wells, G. B.,
and Lester, R. L.
(1997)
J. Biol. Chem.
272,
30196-30200[Abstract/Free Full Text]
-
Jenkins, G. M.,
Richards, A.,
Wahl, T.,
Mao, C.,
Obeid, L.,
and Hannun, Y.
(1997)
J. Biol. Chem.
272,
32566-32572[Abstract/Free Full Text]
-
Merrill, A. H., Jr.,
and Wang, E.
(1992)
Methods Enzymol.
209,
427-437[Medline]
[Order article via Infotrieve]
-
Kaiser, C.,
Michaelis, S.,
and Mitchell, A.
(1994)
Methods in Yeast Genetics, pp. 73-83 and 209-210, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
-
Pinto, W. J.,
Srinivasan, B.,
Shepherd, S.,
Schmidt, A.,
Dickson, R. C.,
and Lester, R. L.
(1992)
J. Bacteriol.
174,
2565-2574[Abstract/Free Full Text]
-
Jungalwala, F. B.,
Evans, J. E.,
Bremer, E.,
and McCluer, R. H.
(1983)
J. Lipid Res.
24,
1380-1388[Abstract]
-
Dickson, R. C.,
Wells, G. B.,
Schmidt, A.,
and Lester, R. L.
(1990)
Mol. Cell. Biol.
10,
2176-2181[Abstract/Free Full Text]
-
Nagiec, M. M.,
Nagiec, E. E.,
Baltisberger, J. A.,
Wells, G. B.,
Lester, R. L.,
and Dickson, R. C.
(1997)
J. Biol. Chem.
272,
9809-9817[Abstract/Free Full Text]
-
Zweerink, M. M.,
Edison, A. M.,
Wells, G. B.,
Pinto, W.,
and Lester, R. L.
(1992)
J. Biol. Chem.
267,
25032-25038[Abstract/Free Full Text]
-
Lester, R. L.,
Wells, G. B.,
Oxford, G.,
and Dickson, R. C.
(1993)
J. Biol. Chem.
268,
845-856[Abstract/Free Full Text]
-
Fewster, M. E.,
Burns, B. J.,
and Mead, J. F.
(1969)
J. Chromatogr.
43,
120-126[CrossRef][Medline]
[Order article via Infotrieve]
-
Skipski, V. P.,
and Barclay, M.
(1969)
Methods Enzymol.
14,
545-546
-
Kato, R.,
Yasumori, T.,
and Yamazoe, Y.
(1991)
Methods Enzymol.
206,
183-190[Medline]
[Order article via Infotrieve]
-
Buede, R.,
Rinker-Schaffer, C.,
Pinto, W. J.,
Lester, R. L.,
and Dickson, R. C.
(1991)
J. Bacteriol.
173,
4325-4332[Abstract/Free Full Text]
-
Bidwai, A. P.,
and Takemoto, J. Y.
(1987)
Proc. Natl. Acad. Sci. U. S. A.
84,
64755-64759
-
Altschul, S. F.,
Gish, W.,
Miller, W.,
Myers, E. W.,
and Lipman, D. J.
(1990)
J. Mol. Biol.
215,
403-410[CrossRef][Medline]
[Order article via Infotrieve]
-
Bard, M.,
Bruner, D. A.,
Pierson, C. A.,
Lees, N. D.,
Biermann, B.,
Frye, L.,
Koegel, C.,
and Barbuch, R.
(1996)
Proc. Natl. Acad. Sci. U. S. A.
93,
186-190[Abstract/Free Full Text]
-
Li, L.,
and Kaplan, J.
(1996)
J. Biol. Chem.
271,
16927-16933[Abstract/Free Full Text]
-
Shanklin, J.,
Achim, C.,
Schmidt, H.,
Fox, B. G.,
and Munck, E.
(1997)
Proc. Natl. Acad. Sci. U. S. A.
94,
2981-2986[Abstract/Free Full Text]
-
Stukey, J. E.,
McDonough, V. M.,
and Martin, C. E.
(1990)
J. Biol. Chem.
265,
20144-20149[Abstract/Free Full Text]
-
Lester, R. L.,
and Dickson, R. C.
(1993)
Adv. Lipid Res.
26,
253-274[Medline]
[Order article via Infotrieve]
-
Pinto, W. J.,
Wells, G. W.,
and Lester, R. L.
(1992)
J. Bacteriol.
174,
2575-2581[Abstract/Free Full Text]
-
Hechtberger, P.,
Zinser, E.,
Paltauf, F.,
and Daum, G.
(1994)
in
Assembly of Sphingolipids into Membranes of the Yeast, Saccharomyces cerevisiae (Op den Kamp, J. A. F., ed), Vol. H82, pp. 23-31, Springer-Verlag, Berlin, Germany
-
Haak, D.,
Gable, K.,
Beeler, T.,
and Dunn, T.
(1997)
J. Biol. Chem.
272,
29704-29710[Abstract/Free Full Text]
-
Geeraert, L.,
Mannaerts, G. P.,
and Van Veldhoven, P. P.
(1997)
Biochem. J.
327,
125-132
-
Wu, W.-I.,
McDonough, V. M.,
Nickels, J. T., Jr.,
Ko, J.,
Fischl, A. S.,
Vales, T. R.,
Merrill, A. H., Jr.,
and Carman, G. M.
(1995)
J. Biol. Chem.
270,
13171-13178[Abstract/Free Full Text]
-
Oh, C.-S.,
Toke, D. A.,
Mandala, S.,
and Martin, C. E.
(1997)
J. Biol. Chem.
272,
17376-17384[Abstract/Free Full Text]
-
Kulmacz, R. J.,
and Schroepfer, G. J.
(1978)
J. Am. Chem. Soc.
100,
3963-3964[CrossRef]
-
Hakomori, S.
(1996)
Cancer Res.
56,
5309-5318[Abstract/Free Full Text]
-
Michel, C.,
van Echten-Deckert, G.,
Rother, J.,
Sandhoff, K.,
Wang, E.,
and Merrill, A. H., Jr.
(1997)
J. Biol. Chem.
272,
22432-22437[Abstract/Free Full Text]
-
Feigin, A. M.,
Takemoto, J. Y.,
Wangspa, R.,
Teeter, J. H.,
and Brand, J. G.
(1996)
J. Membr. Biol.
149,
41-47[CrossRef][Medline]
[Order article via Infotrieve]
-
Greenberg, M. L.,
and Lopes, J. M.
(1996)
Microbiol. Rev.
60,
1-20[Free Full Text]
-
Fishbein, J. D.,
Dobrowsky, R. T.,
Bielawska, A.,
Garrett, S.,
and Hannun, Y. A.
(1993)
J. Biol. Chem.
268,
9255-9261[Abstract/Free Full Text]
-
Nickels, J. T.,
and Broach, J. R.
(1996)
Genes Dev.
10,
382-394[Abstract/Free Full Text]
-
Ella, K. M.,
Qi, C.,
Dolan, J. W.,
Thompson, R. P.,
and Meier, K. E.
(1997)
Arch. Biochem. Biophys.
340,
101-110[CrossRef][Medline]
[Order article via Infotrieve]
-
Smith, S. W.,
and Lester, R. L.
(1974)
J. Biol. Chem.
249,
3395-3405[Abstract/Free Full Text]
-
Patton, J. L.,
Srinivasan, B.,
Dickson, R. C.,
and Lester, R. L.
(1992)
J. Bacteriol.
174,
7180-7184[Abstract/Free Full Text]
-
Skrzypek, M.,
Lester, R. L.,
and Dickson, R. C.
(1997)
J. Bacteriol.
179,
1513-1520[Abstract/Free Full Text]
-
Dickson, R. C.,
Nagiec, E. E.,
Wells, G. B.,
Nagiec, M. M.,
and Lester, R. L.
(1997)
J. Biol. Chem.
272,
29620-29625[Abstract/Free Full Text]
-
Shanklin, J.,
Whittle, E.,
and Fox, B. G.
(1994)
Biochemistry
33,
12787-12794[CrossRef][Medline]
[Order article via Infotrieve]
Copyright © 1998 by The American Society for Biochemistry and Molecular Biology, Inc.

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D. Andes, A. Lepak, J. Nett, L. Lincoln, and K. Marchillo
In Vivo Fluconazole Pharmacodynamics and Resistance Development in a Previously Susceptible Candida albicans Population Examined by Microbiologic and Transcriptional Profiling.
Antimicrob. Agents Chemother.,
July 1, 2006;
50(7):
2384 - 2394.
[Abstract]
[Full Text]
[PDF]
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P. Ternes, P. Sperling, S. Albrecht, S. Franke, J. M. Cregg, D. Warnecke, and E. Heinz
Identification of Fungal Sphingolipid C9-methyltransferases by Phylogenetic Profiling
J. Biol. Chem.,
March 3, 2006;
281(9):
5582 - 5592.
[Abstract]
[Full Text]
[PDF]
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S. Zink, C. Mehlgarten, H. K. Kitamoto, J. Nagase, D. Jablonowski, R. C. Dickson, M. J. R. Stark, and R. Schaffrath
Mannosyl-Diinositolphospho-Ceramide, the Major Yeast Plasma Membrane Sphingolipid, Governs Toxicity of Kluyveromyces lactis Zymocin
Eukaryot. Cell,
May 1, 2005;
4(5):
879 - 889.
[Abstract]
[Full Text]
[PDF]
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A. Kihara and Y. Igarashi
FVT-1 Is a Mammalian 3-Ketodihydrosphingosine Reductase with an Active Site That Faces the Cytosolic Side of the Endoplasmic Reticulum Membrane
J. Biol. Chem.,
November 19, 2004;
279(47):
49243 - 49250.
[Abstract]
[Full Text]
[PDF]
|
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A. H. Merrill Jr.
De Novo Sphingolipid Biosynthesis: A Necessary, but Dangerous, Pathway
J. Biol. Chem.,
July 12, 2002;
277(29):
25843 - 25846.
[Full Text]
[PDF]
|
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|

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E. Swain, K. Baudry, J. Stukey, V. McDonough, M. Germann, and J. T. Nickels Jr.
Sterol-dependent Regulation of Sphingolipid Metabolism in Saccharomyces cerevisiae
J. Biol. Chem.,
July 12, 2002;
277(29):
26177 - 26184.
[Abstract]
[Full Text]
[PDF]
|
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P. Ternes, S. Franke, U. Zahringer, P. Sperling, and E. Heinz
Identification and Characterization of a Sphingolipid Delta 4-Desaturase Family
J. Biol. Chem.,
July 5, 2002;
277(28):
25512 - 25518.
[Abstract]
[Full Text]
[PDF]
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K. Gable, G. Han, E. Monaghan, D. Bacikova, M. Natarajan, R. Williams, and T. M. Dunn
Mutations in the Yeast LCB1 and LCB2 Genes, Including Those Corresponding to the Hereditary Sensory Neuropathy Type I Mutations, Dominantly Inactivate Serine Palmitoyltransferase
J. Biol. Chem.,
March 15, 2002;
277(12):
10194 - 10200.
[Abstract]
[Full Text]
[PDF]
|
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K. Funato and H. Riezman
Vesicular and nonvesicular transport of ceramide from ER to the Golgi apparatus in yeast
J. Cell Biol.,
December 10, 2001;
155(6):
949 - 960.
[Abstract]
[Full Text]
[PDF]
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O. Hwang, G. Kim, Y. J. Jang, S. W. Kim, G. Choi, H. J. Choi, S. Y. Jeon, D. G. Lee, and J. D. Lee
Synthetic Phytoceramides Induce Apoptosis with Higher Potency than Ceramides
Mol. Pharmacol.,
April 16, 2001;
59(5):
1249 - 1255.
[Abstract]
[Full Text]
|
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S. D. Stock, H. Hama, J. A. Radding, D. A. Young, and J. Y. Takemoto
Syringomycin E Inhibition of Saccharomyces cerevisiae: Requirement for Biosynthesis of Sphingolipids with Very-Long-Chain Fatty Acids and Mannose- and Phosphoinositol-Containing Head Groups
Antimicrob. Agents Chemother.,
May 1, 2000;
44(5):
1174 - 1180.
[Abstract]
[Full Text]
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M. E. Cardenas, M. C. Cruz, M. Del Poeta, N. Chung, J. R. Perfect, and J. Heitman
Antifungal Activities of Antineoplastic Agents: Saccharomyces cerevisiae as a Model System To Study Drug Action
Clin. Microbiol. Rev.,
October 1, 1999;
12(4):
583 - 611.
[Abstract]
[Full Text]
[PDF]
|
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C. L. Bender, F. Alarcon-Chaidez, and D. C. Gross
Pseudomonas syringae Phytotoxins: Mode of Action, Regulation, and Biosynthesis by Peptide and Polyketide Synthetases
Microbiol. Mol. Biol. Rev.,
June 1, 1999;
63(2):
266 - 292.
[Abstract]
[Full Text]
[PDF]
|
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C. Mao, R. Xu, A. Bielawska, Z. M. Szulc, and L. M. Obeid
Cloning and Characterization of a Saccharomyces cerevisiae Alkaline Ceramidase with Specificity for Dihydroceramide
J. Biol. Chem.,
September 29, 2000;
275(40):
31369 - 31378.
[Abstract]
[Full Text]
[PDF]
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G. M. Jenkins and Y. A. Hannun
Role for de Novo Sphingoid Base Biosynthesis in the Heat-induced Transient Cell Cycle Arrest of Saccharomyces cerevisiae
J. Biol. Chem.,
March 9, 2001;
276(11):
8574 - 8581.
[Abstract]
[Full Text]
[PDF]
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T. C. Hallstrom, L. Lambert, S. Schorling, E. Balzi, A. Goffeau, and W. S. Moye-Rowley
Coordinate Control of Sphingolipid Biosynthesis and Multidrug Resistance in Saccharomyces cerevisiae
J. Biol. Chem.,
June 22, 2001;
276(26):
23674 - 23680.
[Abstract]
[Full Text]
[PDF]
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M. Abe, I. Nishida, M. Minemura, H. Qadota, Y. Seyama, T. Watanabe, and Y. Ohya
Yeast 1,3-beta -Glucan Synthase Activity Is Inhibited by Phytosphingosine Localized to the Endoplasmic Reticulum
J. Biol. Chem.,
July 13, 2001;
276(29):
26923 - 26930.
[Abstract]
[Full Text]
[PDF]
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N. Chung, C. Mao, J. Heitman, Y. A. Hannun, and L. M. Obeid
Phytosphingosine as a Specific Inhibitor of Growth and Nutrient Import in Saccharomyces cerevisiae
J. Biol. Chem.,
September 14, 2001;
276(38):
35614 - 35621.
[Abstract]
[Full Text]
[PDF]
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Copyright © 1998 by the American Society for Biochemistry and Molecular Biology.
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