J Biol Chem, Vol. 273, Issue 26, 16273-16280, June 26, 1998
Role of Electrostatic Interactions on the Affinity of Thioredoxin
for Target Proteins
RECOGNITION OF CHLOROPLAST FRUCTOSE-1,6-BISPHOSPHATASE BY MUTANT
ESCHERICHIA COLI THIOREDOXINS*
Santiago
Mora-García,
Roberto
Rodríguez-Suárez, and
Ricardo A.
Wolosiuk
From the Instituto de Investigaciones Bioquímicas,
Fundación Campomar, Facultad de Ciencias Exactas y
Naturales-Universidad de Buenos Aires, Consejo Nacional de
Investigaciones Científicas y Técnicas, Antonio Machado
151, 1405 Buenos Aires, Argentina
 |
ABSTRACT |
Chloroplast thioredoxin-f functions
efficiently in the light-dependent activation of
chloroplast fructose-1,6-bisphosphatase by reducing a specific
disulfide bond located at the negatively charged domain of the enzyme.
Around the nucleophile cysteine of the active site (-W-C-G-P-C-),
chloroplast thioredoxin-f shows lower density of negative charges than
the inefficient modulator Escherichia coli thioredoxin. To
examine the contribution of long range electrostatic interactions to
the thiol/disulfide exchange between protein-disulfide oxidoreductases
and target proteins, we constructed three variants of E. coli thioredoxin in which an acidic (Glu-30) and a neutral
residue (Leu-94) were replaced by lysines. After purification to
homogeneity, the reduction of the unique disulfide bond by NADPH via
NADP-thioredoxin reductase proceeded at similar rates for all variants.
However, the conversion of cysteine residues back to cystine depended
on the target protein. Insulin and difluoresceinthiocarbamyl-insulin
oxidized the sulfhydryl groups of E30K and E30K/L94K mutants more
effectively than those of wild type and L94K counterparts. Moreover,
the affinity of E30K, L94K, and E30K/L94K E. coli
thioredoxin for chloroplast fructose-1,6-bisphosphatase
(A0.5 = 9, 7, and 3 µM,
respectively) increased with the number of positive charges, and was
higher than wild type thioredoxin (A0.5 = 33 µM), though still lower than that of thioredoxin-f
(A0.5 = 0.9 µM). We also
demonstrated that shielding of electrostatic interactions with high
salt concentrations not only brings the A0.5
for all bacterial variants to a limiting value of ~9 µM
but also increases the A0.5 of chloroplast
thioredoxin-f. While negatively charged chloroplast
fructose-1,6-bisphosphatase (pI = 4.9) readily interacted with
mutant thioredoxins, the reduction rate of rapeseed napin (pI = 11.2) diminished with the number of novel lysine residues. These
findings suggest that the electrostatic interactions between
thioredoxin and (some of) its target proteins controls the formation of
the binary noncovalent complex needed for the subsequent
thiol/disulfide exchange.
 |
INTRODUCTION |
The superfamily of Trx1
comprises small proteins (~12 kDa) whose distinctive feature is the
amino acid sequence (-W-C-G-P-C-) functional in thiol/disulfide
exchange with other proteins (1). Their widespread occurrence and
structural stability are matched by a range of biological properties
from metabolic regulation (2) to virus replication (3) and cell
proliferation (4). The ability of the redox-active site to reduce a
broad spectrum of disulfide bonds in proteins is intimately linked to
the regulation of carbon, nitrogen, and sulfur assimilation (2, 5, 6), mRNA translation (7), and the biosynthesis of deoxyribonucleotides (8). The conversion of the active disulfide bond back to
sulfhydryl groups proceeds via NADPH and the flavoprotein
NADP-thioredoxin reductase in most cellular compartments (9) and by
reduced ferredoxin and the iron-sulfur protein ferredoxin-Trx reductase in oxygen-evolving photosynthetic organisms (10).
In higher plant chloroplasts, the presence of two distinct Trxs,
Trx-m and Trx-f, is a highly relevant but still poorly understood issue
(11). The comparison of their primary structures with counterparts from
other sources revealed that the former bears a significant identity
with a variety of prokaryotic Trxs whereas the latter groups with
eukaryotic ones (12). Although the relationship between the
phylogenetic origin and the metabolism of chloroplasts remains unknown,
it was found that the reduced forms of both Trxs participate in the
light-dependent modulation of enzymes. Moreover, these
studies led to the view that chloroplast Trx-m preferentially activates
and deactivates NADP-malate dehydrogenase and glucose-6-phosphate dehydrogenase, respectively, whereas chloroplast Trx-f is highly efficient in the stimulation of key enzymes of photosynthetic CO2 assimilation (CFBPase,
sedoheptulose-1,7-bisphosphatase, phosphoribulokinase, NADP-glyceraldehyde-3-P dehydrogenase). However, evidence
suggests the existence of other, perhaps complementary, mechanisms that may regulate the specificity of Trx for target proteins (13-16). For
example, in vitro studies have shown that spinach
chloroplast Trx-m and Escherichia coli Trx are
indistinguishable from chloroplast Trx-f when the activation of CFBPase
is performed in the presence of fructose 1,6-bisphosphate and
Ca2+ (13, 15).
Native (oxidized) CFBPase serves as excellent substrate for the
analysis of the interaction between Trx and target proteins because the
enzyme activity is effectively modulated not only by the formation of
sulfhydryl groups but also by subtle alterations of the tertiary
structure (14, 15). The reductive activation of CFBPase, but not the
catalytic step, depends on three cysteines clustered in a
solvent-exposed structure encompassing ~15 amino acid residues (named
the 170's loop by Villeret et al.) (17-19). In this
context, the presence of a highly negative potential around the 170's
loop was met with considerable interest because electrostatic attractions constitute a conceptually interesting framework for analyzing the affinity of Trxs for CFBPase (18). Congruent with this
view, the introduction and replacement of negatively charged amino acid
residues in Trxs was detrimental and beneficial, respectively, for the
modulation of CFBPase. For example, K44(58)D, N60(74)D, and Q61(75)D
chloroplast Trx-f as well as K69(70)E chloroplast Trx-m were less
efficient than wild type counterparts, whereas the substitution of
Asp-61 by asparagine in E. coli Trx enhanced 2-fold the
affinity for CFBPase (henceforth, the numbering of amino acid residues
refers to the location in E. coli Trx and those enclosed
between parentheses to the homologous position in the particular Trx)
(16, 20, 21). Nevertheless, previous studies lacked two relevant
features related to the functional significance of electrostatic
interactions. First, the creation of novel positively charged groups on
the surface of Trx should not only enhance the affinity for the
negatively charged domain of CFBPase but also impair that for basic
proteins. Second, the interaction of Trx with target proteins should be
sensitive to the shielding of electrostatic attractions by neutral
salts.
Our goal in the present study was to establish whether novel positive
charges will make inefficient Trxs much more effective in the
activation of CFBPase and concurrently sensitive to high ionic
strength. Therefore, the charge distribution on the surface of E. coli Trx was approached to that of chloroplast Trx-f by site-directed mutagenesis. The data reported herein show that mutants
of E. coli Trx, in which lysine residues are located at positions 30 and 94, evoke chloroplast Trx-f in the modulation of
CFBPase, even if the capacity of the active site for thiol/disulfide exchange with reductants and oxidants only changes slightly. However, more importantly, the affinity of all variants for CFBPase approaches to a common limiting value when high concentrations of neutral salts
shield the attraction between these interacting proteins. Consistent
with the predominant role of electrostatics in the interaction between
variants of E. coli Trx and the target protein, the higher
the number of lysine residues, the lower the reduction rate of a
positively charged protein, rapeseed napin (22).
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EXPERIMENTAL PROCEDURES |
Bacterial Strains and Cloning Vectors--
The gene coding for
the entire sequence of the E. coli Trx flanked by
NdeI and EcoRI restriction sites was amplified by
PCR using as template the plasmid pFP1 (21). Subsequently, this fragment of DNA was subcloned into an IPTG-inducible vector, pET22b(+), containing a T7 RNA polymerase promoter and a high-affinity ribosome binding site. Detailed properties of this overexpression vector have
been described elsewhere (23). The overexpression strain JM109/DE3
(F' traD36 proAB lacIq
{lacZ}M15/recA1 endA1 gyrA96 thi
hsdR17 (rK
,mK
)
supE44
(lac-proAB) relA1) was used as a
host strain for transformation in all experiments (Promega, Madison,
WI). Bacteria were grown at 37 °C in LB medium containing ampicillin
(200 µg/ml), and cell number was determined by light attenuation at
600 nm.
Materials--
Enzymes and solutions for DNA manipulations were
used according to either manufacturer's instructions (New England
Biolabs, Beverly, MA), Sambrook et al. (24), or Ausubel
et al. (25). Deoxiribonucleotides were procured from
Amersham Pharmacia Biotech (Uppsala, Sweden) and oligonucleotides from
NBI (Plymouth, MN) or GenSet (La Jolla, CA). Bovine pancreas insulin
(henceforth insulin) and biochemical reagents were purchased from
Sigma-Aldrich. E. coli NADP-thioredoxin reductase was
purchased from IMCO (Stockholm, Sweden). CFBPase and chloroplast Trx-f
were purified from fresh spinach leaves, according to Stein and
Wolosiuk (26).
Construction of Expression Plasmids--
Site-directed
mutagenesis was accomplished using the "megaprimer" method
described by Sarkar and Sommer (27). Briefly, two successive PCRs
required a pair of common oligonucleotides containing either the
NdeI or the EcoRI restriction sites flanking the
gene of E. coli Trx at the 5' and 3' positions, respectively
(primers A and B) and a particular mismatch-bearing oligonucleotide
that complemented the internal segment to be mutagenized. The first round of amplification on the wild type gene as template yielded a
truncated Trx sequence that spanned from either the 5'- or the 3'-end
to a short sequence beyond the mutagenized codon. Using the same
template, the novel (large) oligonucleotide and the other common
primer, the second PCR restored the entire, but mutated, DNA sequence
of Trx. The primers used for the specific mutation are listed below
(mismatches in bold type).
Thirty-three cycles of amplification (1 min at 94 °C, 45 s at variable temperatures, 45 s at 72 °C) were performed in
0.05 ml of a solution that contained 5 ng of the pET22b(+) plasmid harboring the complete coding sequence of E. coli Trx, 5 nmol of each dNTP, 25 pmol of flanking oligonucleotides, 1 unit of Vent
polymerase, and the respective commercial buffer (New England Biolabs).
Alternatively, this outline used the single mutant E30K E. coli Trx as template for the construction of the double mutant E30K/L94K E. coli Trx. After the predicted size of the PCR
product was confirmed by electrophoresis in 1% agarose, the excess of dNTP and oligonucleotides was removed by passage through Wizard DNA
Clean Up (Promega).
Expression and Assay of Recombinant Wild Type and Mutant E. coli
Trx--
Amplified DNAs and the expression vector pET22b(+) were
digested with NdeI and EcoRI, gel-purified, and
ligated with T4 DNA ligase. Expression of recombinant wild type and
mutant Trx was accomplished by electroporation of the E. coli strain JM109/DE3 and subsequent induction with IPTG. Given
that the replacement of amino acids altered the net charge of proteins,
we screened the appearance of mutants by nondenaturing PAGE of whole
cell lysates. Plasmids were isolated from overnight cultures of
selected colonies and, to ensure that only desired mutations were
present, the entire coding region was verified by the
dideoxynucleotide sequencing on both strands of DNA with
Sequenase version 2.0 (Amersham Pharmacia Biotech,
Buckinghamshire, UK).
Expression and Purification of Trx--
After an overnight
incubation, a 20-ml culture was inoculated into 1 liter of LB broth
containing ampicillin and grown at 37 °C to mid-exponential phase
(OD600 nm ~ 0.6). IPTG was added to a final
concentration of 0.2 mM, and the bacterial culture was
incubated at 37 °C for additional 4 h. Cells were harvested by
centrifugation at 10,000 × g for 10 min, washed off
from medium with 30 mM Tris-HCl (pH 7.9), 1 mM
EDTA, 150 mM NaCl, and resuspended in the same buffer
devoid of NaCl.
After two rounds of freezing and thawing, bacterial cells were
subjected to two passages through a French press (100 megapascals). The
lysate was clarified by centrifugation at 10,000 × g
for 10 min before fractionation of the supernatant fraction with
ammonium sulfate (20% to 90% of saturation). The final precipitate
was dissolved in 30 mM Tris-HCl (pH 7.9) and 1 mM EDTA and exhaustively dialyzed against the same solution
containing 100 mM NaCl. The dialyzate was applied onto a
Sephadex G-50 column equilibrated and eluted with 30 mM
Tris-HCl (pH 7.9) containing 100 mM NaCl. Fractions having
protein-disulfide reductase activity (see below) were pooled and loaded
on a DEAE-Sepharose Fast-Flow column (Amersham Pharmacia Biotech)
equilibrated in the latter buffer. After desorption of proteins with a
linear gradient between 0.1 and 0.6 M NaCl, fractions
containing the protein-disulfide reductase activity were concentrated
by ultrafiltration or lyophilization and dialyzed against 30 mM Tris-HCl (pH 7.9).
Protein-Disulfide Reductase (Trx) Activity--
The activity of
Trx as protein-disulfide reductase was assessed in the presence of a
dithiol (DTT) and an oxidized protein (insulin, di-FTC-insulin). In the
classical turbidimetric assay (28), we followed at 25 °C the
increase of light attenuation at 650 nm after DTT (0.5 mM)
was added to a solution of 100 mM potassium phosphate
buffer (pH 7.0), 1 mM EDTA, 100 µM insulin, and Trx (~1.5 µM). In the novel fluorometric assay (29,
30), the reaction, carried out in 50 mM potassium phosphate
buffer (pH 7.0), 1 mM EDTA, 0.7 µM
di-FTC-insulin and Trx (typically 0.1 µM), was started
adding DTT (0.1 mM). The reduction of di-FTC-insulin was
monitored in a Jasco FP-770 spectrofluorometer by following the
emission intensity at 519 nm when the fluorophore was excited at 495 nm. Given the appearance of lag phases in both procedures, we used the
maximum rate of the measurement for the calculation of the
protein-disulfide reductase activity.
Alternatively, the couple NADPH and NADP-thioredoxin reductase can be
used as a reductant of Trx instead of DTT. To this end, the reaction
was carried out at 25 °C with Trx (~1.5 µM) in 100 mM potassium phosphate buffer (pH 7.0), 1 mM
EDTA, 0.3 mM NADPH, and either 0.1 mM insulin
or 0.026 mM napin. The reaction was started by the addition
of NADP-thioredoxin reductase (25 nM) and followed by the
decrease of absorbance at 340 nm.
NADP-Trx Reductase Activity--
To evaluate the
interaction of Trx with NADP-thioredoxin reductase, we analyzed the
oxidation of NADPH linked to the reduction of DTNB (Ellman's reagent).
The reaction was performed at 25 °C in 100 mM potassium
phosphate buffer (pH 7.6), 1 mM EDTA, 0.25 mM
NADPH, 1 mM DTNB, and Trx (from 0.3 to 10 µM). The generation of 2-nitro-5-thiobenzoate was started
by the addition of NADP-thioredoxin reductase (25 nM) and
followed spectrophotometrically at 412 nm. The molar absorptivity of
2-nitro-5-thiobenzoate at 412 nm was 14,140 M
1·cm
1 for all calculations,
and data were fitted to a hyperbolic function by a non-linear least
squares method.
Determination of Trx Redox Potentials--
The reversibility of
the reaction was followed at 25 °C according to Moore et
al. (33).
Briefly, the reaction cuvette contained initially 100 mM potassium phosphate buffer (pH 7.0), 1 mM
EDTA, 50 µM NADPH (
340 nm = 6, 200 M
1·cm
1), 1.18 mM
NADP (
260 nm = 15, 300 M
1·cm
1), 20 nM
NADP-thioredoxin reductase, and variable amounts of Trx (from 8 to 20 µM). Absorbance at 340 nm was followed
spectrophotometrically until it remained constant for 2 min. At this
stage, NADP+ was added and the time-progress variation of
A340 was measured again. On the basis of (i)
changes of NADPH concentration and (ii) the stoichiometry of the above
reaction, concentrations of NADP+ and oxidized and reduced
Trx were calculated. From these data, the calculation of the
equilibrium constant
|
(Eq. 1)
|
provided the redox potential, E°'(Trx) = E°'(NADP) + (RT/nF)·ln Keq, in which
E°'(NADP) =
0.324 V (25 °C, pH 7.0),
R = 8.31 J·M
1·K
1, n = 2, and F = 96,487 J·M
1·V
1.
CFBPase Activity--
To assess the reductive activation of
CFBPase, the activity was analyzed by the two-stage assay (31). The
enzyme (typically 0.8 µg) was incubated at 24 °C for 30 min in 100 mM Tris-HCl buffer (pH 7.9), 5 mM DTT, and Trx.
Following the incubation, an aliquot was withdrawn and injected into
the solution for the assay of activity (100 mM Tris-HCl (pH
7.9), 2 mM MgCl2, 1 mM fructose 1,6-bisphosphate, and 0.1 mM EGTA). The hydrolysis of
fructose 1,6-bisphosphate was halted after 3 min at 24 °C by adding
the reagent for the quantification of the Pi released
(32).
Protein Determination--
Protein concentrations were
determined by the method of Lowry et al. using bovine serum
albumin as standard (34). A molar extinction coefficient of 13,700 M
1·cm
1 at 280 nm was used to
quantitate pure Trx preparations (35).
Gel Electrophoresis--
One-dimensional PAGE was run
using the Mini-PROTEAN II equipment from Bio-Rad. SDS-PAGE and
nondenaturing PAGE were performed according to Schägger and
von Jagow (36) and Laemmli (37), respectively. Gels were stained with
Coomassie Brilliant Blue and destained in methanol:acetic
acid:H2O (5:1:4, v/v/v).
Computational Methods--
The coordinates of the oxidized wild
type E. coli Trx were derived from the high resolution NMR
studies of Jeng et al. (38). Model building of spinach
chloroplast Trx-f by the automated SWISS-MODEL program (41) used as
template the coordinates of human Trx (39), whereas the tertiary
structures of spinach chloroplast Trx-m and E. coli variants
were based on the solved structures of E. coli (38) and
Anabaena (40) counterparts. Electrostatic potential maps on
the surface of proteins were obtained by running the GRASP program (42)
on a Silicon Graphics Iris 4.X computer. To this end, the electrostatic
potential was calculated using the following parameters: internal
dielectric of the protein, 2.0; solvent dielectric, 80.0; ionic
strength, 150 mM; probe radius, 1.4 Å; ionic radius, 2 Å;
net charge of all arginine and lysine residues, +1; and net charge of
all aspartic and glutamic residues,
1.
 |
RESULTS |
Computational Analysis of Trx Structure--
Any rational
attempt to determine the amino acid residues of chloroplast Trx-f that
contribute to the formation of the binary complex with CFBPase should
be based on the atomic model of both partners. At the onset of the
project, there had been no published three-dimensional structures of
the former (43), but the structures of the oxidized and reduced forms
of E. coli and human Trx were available (44). Therefore, we
performed a comparative study among computer-simulated models of
site-directed mutants aimed at specifically defining the distribution
of charges on the surface that surrounds the redox-active site. We
initially relied on the atomic coordinates of human Trx to simulate the
tertiary structure of plastidic Trx-f by the SWISS-MODEL program (41).
Similarly, the tertiary structure assignment of spinach chloroplast
Trx-m was based on the atomic coordinates of E. coli and
Anabaena Trxs (38, 40). As expected, modeled chloroplast
Trxs retained the general features of these proteins, i.e.
they consisted of a
-pleated sheet of three parallel and two
antiparallel strands surrounded by four helical segments (45).
We subsequently calculated by the GRASP program the electrostatic
potential at the level of solvent-accessible surface and represented
the isopotential contours at ± 2 kT (Fig.
1). Although modeled proteins had almost
the same size (E. coli Trx, 13,300 Å3; spinach
chloroplast Trx-f, 13,600 Å3; spinach chloroplast Trx-m,
13,700 Å3), the volume of positively charged isopotential
shells of chloroplast Trx-f (3,200 Å3) exceeded that of
E. coli Trx (2,500 Å3) and chloroplast Trx-m
(1,200 Å3). Mirroring this distribution of charges, the
volume of negative contours was 12,700 Å3 for chloroplast
Trx-m, 9,200 Å3 for E. coli, and 7,800 Å3 for chloroplast Trx-f. These calculations, however
approximate, disclosed that the surface of chloroplast Trx-f lacked
large negatively charged areas which were present in E. coli
and chloroplast m-type Trxs. Moreover, these data were consistent with
a higher pI value for spinach chloroplast Trx-f (6.1) than for E. coli (4.67) and spinach chloroplast Trx-m (4.5) (46). In light of
these results, we sought in the primary structure of E. coli
Trx information on amino acid residues that (i) interacted with the
solvent in the vicinity of the active site, (ii) lay on somewhat
distorted regions, and (iii) differed significantly with chloroplast
Trx-f. Specifically, the segment between residues 29-32, which
connects the C terminus of
-2 strand to the N terminus of
-2
helix, contains a variable residue interposed between two highly
conserved ones, Ala-29 (except in chloroplast Trx-f) and Trp-31. This
particular amino acid is acidic in E. coli and related
purple photosynthetic bacteria, serine in Chlorobium,
proline in cyanobacteria and chloroplast Trx-m, threonine in eukaryotic
Trxs, but only glutamine (spinach, rapeseed, Arabidopsis) or
lysine (pea) in chloroplast Trx-f. A highly variable amino acid
sequence also occurs in the 94-96 segment that links the last
-strand with
-4 helix. Next to conserved Gly-92 and Ala-93,
the side chain of the residue 94 is aliphatic and nonpolar in most
eubacterial Trx and chloroplast Trx-m, asparagine in eukaryotes, but
lysine in Trx-h and chloroplast Trx-f. Mutations in these particular
residues led to structures in which, as exemplified by E30K/L94K Trx
(Fig. 1c), the surface charge distribution departed from
wild type E. coli Trx and approached that of chloroplast Trx-f.

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Fig. 1.
Electrostatic properties of Trxs. Charge
distribution on molecular surfaces of E. coli wild type Trx
(a), spinach chloroplast Trx-f (b), E30K/L94K
E. coli Trx (c), and spinach chloroplast Trx-m
(d), as calculated with GRASP (42). Electrostatic potential
at protein surface and superimposed isopotential shells (calculated at
±2 kT) are colored as follows: red as negative
and blue as positive. The active site region of all proteins
is located at the center of each image. An S illustrates the
position of the accessible sulfur atom of Cys-32. Atom coordinates of
a come from the NMR studies of Jeng et al. (38);
b-d were modeled with the SWISS-MODEL program (41).
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Site-directed Mutagenesis, Expression, and Purification of Variants
of E. coli Trx--
DNA fragments encoding the entire sequence of the
wild type and the E30K, L94K, and E30K/L94K mutants of E. coli Trx were cloned between NdeI/EcoRI
sites of the bacterial expression vector pET22b(+), and the nucleotide
sequence was confirmed by the dideoxynucleotide termination method.
Next, we employed the E. coli strain JM109 (DE3) for the
expression of novel plasmids in order to avoid any homologous
recombination with the chromosomal gene coding for the wild type Trx.
Upon induction of transformed cells and disruption by French press,
high speed centrifugation of bacterial lysates yielded all variants of
Trx in the supernatant fraction. The purification process started with
an ammonium sulfate fractionation of the soluble fraction followed
successively by size-exclusion and ion-exchange chromatography over
Sephadex G-50 and DEAE-Sepharose Fast Flow, respectively. The purified
proteins have been shown to be pure at greater than 95%, as observed
on SDS-PAGE (Fig. 2a).
Moreover, the migration of novel Trxs in non-denaturing PAGE not only
was congruent with an increase of one (L94K), two (E30K), and three (E30K/L94K) positive charges in the molecule of E. coli Trx,
it also revealed the absence of any contamination with the wild type counterpart (Fig. 2b). Following the above procedure, the
average yield of all Trx variants ranged from 40 to 60 mg/liter of
culture media.

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Fig. 2.
Electrophoretic analysis of E. coli
Trxs. 10 µg of purified Trx were subjected to
Tricine/SDS-PAGE (36) (a) or nondenaturing PAGE (37)
(b). Lane 1, wild type; lane 2, E30K;
lane 3, L94K; lane 4, E30K/L94K; M,
molecular mass markers.
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|
In order to obtain an insight on structural differences between mutant
Trxs and the wild type counterpart, we analyzed the fourth-derivative
of the near ultraviolet absorption spectra (14). All variants showed
two large peaks (284.2 and 290.8 nm) and two large troughs (287.6 and
294.2 nm). When the intensity spanning from the maximum at 290.8 nm to
the minimum at 294.2 nm was made relative to the intensity between the
maximum at 284.2 nm and the minimum at 287.7 nm (i.e. the
geometrical factor R = h2/h1; Ref. 47), all
values ranged from 0.99 to 1.15. Moreover, the fourth-derivative
spectra nearly coincided in shape and in wavelength positions when all
Trxs were reduced with 10 mM DTT. Intrinsic fluorescence
was also monitored as indicator of conformational differences. When the
oxidized form was excited at 280 nm, the emission maximum at 339 nm and
the fluorescence intensity of all variants were similar to those in the
wild type protein. All reduced forms showed an emission maximum at 344 nm and a 3-fold enhancement of the quantum yield at pH 7.0. Taken
together, these data demonstrate that the mutation of residues at
peripheral loops did not elicit gross alterations around tryptophan and
tyrosine residues of oxidized and reduced E. coli Trx.
Further evidence for the lack of large conformational changes came from
a different approach. In protein-disulfide oxidoreductases, the redox
potential of the catalytic disulfide bond is extremely sensitive to the
substitution of amino acids that constitute or are close to the 14-atom
ring (48). To determine this particular feature for all variants of
E. coli Trx, we analyzed the reversible equilibrium
catalyzed by NADP-thioredoxin reductase as outlined by Moore
et al. (33). Redox potentials of mutant Trx (E30K,
0.269
V; L94K,
0.271 V; E30K/L94K,
0.268 V) were close to that of the
wild type counterpart (
0.272 V) when the concentrations of Trxs
spanned from 8 to 20 µM.
Protein-Disulfide Reductase Activity of Mutant Trxs--
Based on
the well known capacity of Trx for catalyzing the hydrogen transfer
from a reductant (Red-H2) to the disulfide bond of an
oxidant (Ox-S2), we examined the protein-disulfide
oxidoreductase activity of mutant proteins by using different acceptors
and donors as substrates (Scheme I).
Given that our primary goal was to study the affinity of reduced
Trx for protein substrates, it was necessary to exclude kinetic changes
due to the interaction between oxidized Trx and its reductants. Therefore, the oxidation of NADPH by NADP-Trx reductase for the reduction of Trx was assayed in the presence of DTNB. The large excess
of the final hydrogen acceptor circumvented the slowness of DTNB
reduction (k = 103
M
1·cm
1) relative to the
reduction of Trx by NADP-Trx reductase (k = 105 M
1·cm
1) and
in so doing kept most of Trx in the oxidized state (29). The variants
were all equally reactive toward NTR; they maintained the maximum
velocity (20 µmol of NADPH oxidized·min
1) and
Km with only feeble variations (wild type (1.43 µM), E30K (1.41 µM), L94K (1.71 µM), and E30K/L94K (1.40 µM)).
At variance, when insulin was the final hydrogen acceptor, the rate of
NADPH oxidation for E30K and E30K/L94K mutants (5.6 µmol·min
1) was persistently higher than for the wild
type and L94K Trx (4.6 µmol·min
1). That this effect
reflected differences in the interaction between Trx and insulin was
confirmed in the reaction driven by DTT, as proteins carrying the E30K
mutation were again 30% more active than other variants (Fig.
3). All these results demonstrated that novel positive charges near the active site of E. coli Trx
did not affect the interaction with NADP-Trx reductase but elicited slight modifications in the affinity of the reduced form for other target proteins (49).

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Fig. 3.
Protein-disulfide reductase activity of
E. coli Trxs. The ability of E. coli Trxs
to catalyze the reduction of intermolecular disulfide bonds of insulin
and di-FTC-insulin with DTT was followed by turbidimetry (empty
bars) and fluorometry (filled bars), respectively. The
activity of Trx variants relative to the wild type protein is the mean
value of at least three determinations. Control rates are 0.061 A650·min 1 and 0.029 µM di-FTC-insulin reduced·min 1 for the
precipitation and the fluorometric assay, respectively.
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Trx-mediated Activation of CFBPase--
Previous studies
have shown that the two-stage assay is very convenient to analyze the
activity of chloroplast enzymes because it separates the conversion of
the enzyme to a form with different kinetic properties (modulation)
from the transformation of substrates to products (catalysis) (2).
Accordingly, two well defined kinetic constants account for these
events, i.e. the A0.5 is the concentration of a modulator that yields half of the maximum specific activity and the S0.5 constitutes the
concentration of substrate, cofactor or effector that yields half of
the maximum velocity. On this basis, we determined the
A0.5 of Trx by incubating CFBPase with 5 mM DTT at various concentrations of Trx and subsequently measuring the catalytic capacity at 1 mM fructose
1,6-bisphosphate and 2 mM Mg2+. As shown in
Fig. 4, wild type E. coli Trx
(A0.5 = 33 µM) was much less
efficient than chloroplast Trx-f (A0.5 = 0.9 µM). But more important, mutants derived from the former
approached the affinity of the latter, i.e. the
A0.5 of E30K, L94K and E30K/L94K were 9, 7, and
3 µM, respectively. In fact, the increase of positive charges on the surface of E. coli Trx enhanced not only the
affinity for CFBPase but also the enzyme maximum specific activity (130 µmol of Pi released·min
1·mg of
protein
1). Given that these novel mutants departed
significantly from wild type E. coli Trx in their capacity
for reducing other disulfide bearing substrates and became akin to
chloroplast Trx-f in the stimulation of CFBPase activity, we
concluded that electrostatic components play a crucial role in the
interaction with the target protein.

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Fig. 4.
Reductive activation of CFBPase by E. coli Trxs. Spinach enzyme (0.8 µg) was incubated with
variable concentrations of chloroplast Trx-f ( ), or with the
following variants of E. coli Trx: , wild type; ,
E30K; , L94K; , E30K/L94K. The activation process and the assay
of fructose 1,6-bisphosphate hydrolysis were performed as described
under "Experimental Procedures."
|
|
Effect of the Ionic Strength on the Activation of
CFBPase--
If charge attraction is the main driving force in the
recognition of CFBPase by Trx, screening of electrostatic forces by high concentrations of neutral salts should restrict the activation of
CFBPase to the thiol/disulfide exchange reaction. As a consequence, the
A0.5 would converge to an unique value because
all Trxs share identical active site. Fig.
5a shows that high
concentrations of KCl drastically lowered the
A0.5 of wild type E. coli Trx, increased that of L94K and E30K/L94K mutants and did not modify that of
the E30K variant. More importantly, however, the convergence of the
A0.5 for all variants of E. coli Trx
to the limiting value of ~9 µM confirmed the prediction
that the elimination of electrostatic interactions circumscribes the
activation of CFBPase to the thiol/disulfide exchange event. Moreover,
electrostatic screening not only affected variants of E. coli Trx but also increased the A0.5 of the
highly efficient chloroplast Trx-f up to 5 µM. The
difference between the limiting value of A0.5
for chloroplast Trx-f and bacterial Trxs may be attributed to other
structural factors that also contribute to docking Trx to CFBPase.

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Fig. 5.
Effect of neutral salts on the interaction
between Trx and CFBPase. a, activation of CFBPase in the
presence of KCl. As described in Fig. 4, CFBPase (0.8 µg) was
incubated, in the presence of the indicated (fixed) concentrations of
KCl with varying concentrations of chloroplast Trx-f ( ), and the
following variants of E. coli Trx: , wild type; ,
E30K; , L94K; , E30K/L94K. To avoid any effect of residual KCl on
catalysis, its concentration was kept at 25 mM during the
assay of activity. b, effect of the ionic strength on the
A0.5 of Trx. Data from a were plotted
as a function of the inverse of the square root of the ionic strength,
I. Solid lines are the best fits to the equation
log A0.5 = N·M 1 + M 1·I 1/2, which was
derived from the extended Debye-Hückel equation (cf.
Equation 1 in Ref. 50). For the calculation of the ionic strength, the
ion concentration of the electrolyte was corrected for the contribution
of Tris+ (0.061 M at pH 7.9).
|
|
When the association between two proteins is dictated mainly by the
electrostatic potential, the log of the association rate constant
(k1) correlates linearly with the log of the
electrostatic contribution to the mean rational activity coefficient
for a neutral salt (f*) (50). In other words, log
k1 = log
k1(I=0) + a log
f*, where I is the ionic strength of the solution and a is the proportionality constant for a specific pair of
proteins. Log f* is related to I by the equation
log f* =
(N·M
1 + M
1·I
1/2), where
M and N are constants comprising the valency
numbers of anions and cations, the minimal distance that separates an anion from a cation, the temperature, and the dielectric constant of
the solution (cf. Equation 1 in Ref. 50). We analyzed
whether kinetic constants of Trx followed quantitatively the
relationship predicted for the electrostatic association with CFBPase.
Fig. 5b illustrates that the log A0.5
of all variants of E. coli Trx and chloroplast Trx-f was
linearly dependent on the inverse of the square root of the ionic
strength. The best fit of data to log A0.5
versus N·M
1 + M
1·I
1/2 was
obtained when the ionic strength of a solution containing a single
electrolyte of symmetrical valency included the contribution of the
cationic form of Tris (0.061 M at pH 7.9). Irrespective of
whether the slope was positive or negative, the extrapolation of log
A0.5 to I
1/2 = 0 pointed to a unique value (A0.5 ~ 9 µM) for all Trxs. This result showed clearly the
predominant role of electrostatics in the affinity of Trx for CFBPase
and concurrently quantified the contribution of the thiol/disulfide
exchange reaction to the modulation process.
Reduction of Rapeseed Napin by Mutant Trx--
At this stage, we
advanced the hypothesis that positive charges in the target protein
would be an obstacle for the protein-disulfide reductase activity of
mutant Trxs. If this assumption proved to be correct, the reactivity
with cystines of basic proteins would decrease with the number of novel
lysyl residues. To test this hypothesis we used napin, a small (12-15
kDa), highly basic (pI = 11.2), and disulfide-rich protein found
in seeds of Brassica napus (rapeseed). When the
protein-disulfide reductase activity of 1.5 µM Trx was
assayed in the presence of NADPH and NADP-thioredoxin reductase using
26 µM napin as oxidant, the rate of disulfide reduction
was 1, 1.02, 0.66, and 0.38 µmol of NADPH
oxidized·min
1 for the wild type, E30K, L94K, and
E30K/L94K Trx, respectively. The increase of positive charges on the
surface of Trx thus caused a substantial decrease in the rate of napin
reduction.
 |
DISCUSSION |
A cascade of thiol/disulfide exchanges links the
generation of reducing power in the photosynthetic electron transport
system with the modulation of enzymes. When the illumination of
chloroplasts triggers the functioning of this process, two proteins
approach to the active site of Trx: ferredoxin-Trx reductase
to the disulfide bridge of the 14-atoms ring of the oxidized form, and
the protein substrate to sulfhydryl groups of the reduced form. In this
context, the aim of the present study is to define structural features that modulate the affinity of reduced Trx for CFBPase. Determinants that contribute to the specific recognition of chloroplast enzymes should be located at residues that do not participate in redox reactions, as the active site of all Trxs contains identical amino acids. Indeed, Trxs seem to differ in the distribution of surface charges, while maintaining a common tertiary structure of five
-strands and four flanking helices (45, 51). On the other hand,
cysteines essential for the reductive activation of CFBPase reside in a
region surrounded by high density of negative charges, i.e.
the 170's loop (17, 18). These premises led us to consider electrostatic interactions between the protein-disulfide reductase and
the target protein as one of the mechanisms controlling the rate of
thiol/disulfide exchange. Significantly, residues 30 and 94 are located
in loops connecting secondary structure elements and exhibit high
variability among Trxs from different species, suggesting that they may
be available for interacting with target proteins. When positively
charged residues are placed at these positions, the capacity to
interact with hydrogen donors remains relatively constant, whereas the
reduction of hydrogen acceptors differs from the wild type counterpart.
Kinetic studies summarized in Table I are
congruent with this view. Substitution of amino acids does not
seemingly bring about perturbations of the tertiary structure, which
somewhat potentiate the protein-disulfide reductase activity. In fact,
spectroscopic and redox studies clearly marked similarities in the
properties of the wild type E. coli Trx with those of
mutants. Neither the fourth-derivative analysis of the ultraviolet
spectra nor the emission of intrinsic fluorophores showed wavelength
shifts or intensity changes. Moreover, redox potentials of mutants,
deduced from enzyme-mediated equilibria, are in reasonable agreement
with values of wild type E. coli Trx, determined by direct
electrochemistry (52).
These results attest to the importance of intermolecular
noncovalent interactions in controlling the reduction of disulfide bonds whereby the target protein acquires a functional state. Although
A0.5 values of E30K, L94K, and E30K/L94K
E. coli Trx are somewhat higher than that of chloroplast
Trx-f, lower values relative to the wild type counterpart indicate an
improved affinity due primarily to the better formation of a productive
complex with CFBPase. In line with these observations, the effect of
charged modulators on the activation of CFBPase provide a cogent
argument for the participation of electrostatic interactions in this
process. First, negatively charged dithiols are less efficient than
monothiols bearing positive charges in the enhancement of CFBPase
activity (26). Second, polycationic spermidine and spermine prevent the stimulation of CFBPase activity by chloroplast Trx-f, but the activation proceeds when these polyamines are removed (53). Finally, we
recently observed that anionic Tris(carboxyethyl)phosphine does not
activate (reduce) CFBPase, whereas neutral tributylphosphine does so
very efficiently (54). In addition, we presented a direct evidence for
the functional role of charge interactions in reductive processes
catalyzed by Trx, i.e. the incorporation of novel lysine residues to E. coli Trx results in lower reduction rates of
disulfides in a positively charged protein, such as napin (Table
I).
Recent studies by Schreiber and Fersht (50) have shown that
the association rate constant of barnase with barstar correlates with
the electrostatic contribution to the mean rational activity coefficient for neutral salts. On this basis, the most direct way to
further substantiate the involvement of surface charges in the
Trx-mediated activation of CFBPase was to analyze the susceptibility to
the ionic strength of the milieu. The relevant finding was that high
concentrations of KCl impair the affinity of highly efficient
modulators, like E30K/L94K E. coli Trx and chloroplast Trx-f, but improve that of the inefficient wild type E. coli
Trx. leading to a gradual approximation of A0.5
values to a unique value. But more important, the quantitative
relationship between the log A0.5 and the
I
1/2 is congruent with the theoretical
analysis that links the rate of protein interaction with the ionic
composition of the solution (50).
Our data can be rationalized by a mechanism in which the
electrostatic attraction between interacting proteins precedes the thiol/disulfide exchange that has been established for CFBPase (Scheme II) (55).
In this model, long range electrostatic attraction leads Trx-f and
CFBPase to the formation of a noncovalent complex. The non-charged
patch surrounding the nucleophile Cys-32 of Trx might provide the
proper complementarity of both surfaces (reaction 1 in Scheme II). The
correct docking drives the reactive thiolate anion of Trx to cleave the
disulfide bond of CFBPase with the formation of a transient mixed
disulfide between both proteins in which the nucleophilic catalysis
dictates the appearance of a thiolate in the CFBPase moiety (reaction 2 in Scheme II) (55). The intramolecular nature of the reaction leading
to oxidized Trx and reduced CFBPase could account for the rapidity and,
as a consequence, the unstability of the Trx-CFBPase mixed disulfide complex (reaction 3 in Scheme II). The catalytic cycle is then completed by the splitting of the noncovalent complex and release of
the products (reaction 4 in Scheme II) (see Ref. 56 for discussion on
this point). Site-directed mutagenesis on chloroplast Trx-f (57) and
studies on the pKa values of active site cysteines in E. coli Trx (58) make it likely that Cys-32 is involved
in mediating hydrogen transfer to the disulfide of CFBPase, but there is as yet no direct evidence for the formation of a mixed disulfide bridge. In this scheme, Trx-f would exhibit higher affinity for CFBPase
than Trx-m because of their peculiar distribution of surface charges,
which would favor and prevent, respectively, the formation of the
noncovalent complex. Electrostatic shielding with high concentrations
of KCl diminishes the contribution of the docking step to the overall
reaction rate (step1 in the scheme) and, as a consequence, the
activation of CFBPase becomes less sensitive to the source of Trx.
Although the convergence of A0.5 values to a
common value for all Trxs is in line with this view, the marginal
difference between bacterial Trx and chloroplast Trx-f in the limiting
A0.5 would point out to the role of hitherto
uncharacterized structural factors in the formation of the binary
complex. Conformation of non-charged residues around the active site of
chloroplast Trx-f might be relevant in this aspect, i.e.
Trp-31(45), the additional Cys-60(73), and the amino acid sequence
around Pro-76(90).
The involvement of other amino acid residues is claimed in studies
where the affinity for CFBPase is impaired by replacing either lysine
with glutamic in Trx-m (16) or lysine and polar non-charged residues
with negatively charged ones in Trx-f (20). de Lamotte-Guéry
et al. (21) also found a 2-fold enhancement of the
A0.5 for CFBPase when an asparagine replaces
Asp-61 of E. coli Trx. Modifications we introduced on the
primary structure of E. coli Trx increase from 4- to 11-fold
the affinity for CFBPase and, in so doing, provide a novel role for two
highly variable residues of Trxs. Nevertheless, caution must be
exercised in attributing the observed variations in protein-disulfide
reductase activity solely to specific amino acid residues. Several
lines of evidence suggest that an approach for improving the activity
of protein-disulfide reductases is likely to remain dependent on the
intrinsic properties not only of the reductant, but also of the
oxidant. We have shown previously that the A0.5
of wild type E. coli Trx is indistinguishable from that of
chloroplast Trx-f when fructose 1,6-bisphosphate, Ca2+, and
either chaotropic anions or cosolvents modify the conformation of
CFBPase (15). Moreover, results herein showed that the
protein-disulfide reductase activity of mutants is sensitive to the
target disulfide. For example, while the E30K mutation slightly
accelerates the reduction rate of insulin and di-FTC-insulin, it does
not impair the cleavage of cystines in napin but assists
synergistically the L94K mutation in this process. These observations
indicate that the above model is correct but probably not complete,
given the contribution of structural factors of the target protein to the docking process.
The role of electrostatic forces on the interaction of Trx with the
respective reductases remains to be established; FTR has not been
analyzed (although it readily reduces both Trx-m and Trx-f), and data
on NTR are contradictory. Present results suggest that charged
components do not significantly participate in the interaction with the
reductase, insofar as kinetic parameters remained unchanged. At
variance, the Km for E. coli and human
Trx bearing a K36E mutation (which could be considered complementary to
E30K) was higher than that for the wild type counterpart (59, 60). This
discrepancy raises the question whether charge distribution elicited by
the K36E mutation modify intramolecular or intermolecular interactions.
In brief, the specificity of Trx for other proteins will exploit
different structural determinants; Trx-reductases do not seem to be
specially sensitive to the distribution of charges around the active
site, whereas some target proteins are, e.g. CFBPase. Given
that different forms of Trx seem to coexist in many cellular
compartments (61), the proposed mechanism could indeed discriminate
between target proteins.
 |
ACKNOWLEDGEMENTS |
We are indebted to Dr. Alejandro P. Heuck for
the gift of rapeseed napin and helpful comments. We are also grateful
to Mario Sakson for skillful technical assistance.
 |
FOOTNOTES |
*
This work was supported by grants from Universidad de Buenos
Aires, Consejo Nacional de Investigaciones Científicas y
Técnicas (CONICET); Contract CT 92-0070 with the Commision of the
European Communities; a CONICET fellowship (to S. M. G.); a
CONICET research membership (to R. A. W.); and a fellowship
from the University of Buenos Aires (to R. R. S.).The costs of publication of this article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
To whom correspondence should be addressed: Fundación
Campomar, Antonio Machado 151, 1405 Buenos Aires, Argentina. Fax:
54-1-865-2246; E-mail: rwolo{at}iris.iib.uba.ar.
1
The abbreviations used are: Trx(s),
thioredoxin(s); CFBPase, chloroplast fructose-1,6-bisphosphatase;
di-FTC-insulin, difluoresceinthiocarbamyl-insulin; IPTG,
isopropyl-
-D-thiogalactopyranoside; DTNB,
5,5'-dithiobis(2-nitrobenzoic acid); PCR, polymerase chain reaction;
PAGE, polyacrylamide gel electrophoresis; DTT, dithiothreitol; Tricine,
N-tris(hydroxymethyl)methylglycine.
 |
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