J Biol Chem, Vol. 273, Issue 32, 20036-20045, August 7, 1998
Stabilization of p53 by Adenovirus E1A Occurs through Its
Amino-terminal Region by Modification of the Ubiquitin-Proteasome
Pathway*
Takuma
Nakajima
§,
Kenichi
Morita
,
Haruki
Tsunoda
,
Shinobu
Imajoh-Ohmi¶,
Hirofumi
Tanaka
,
Hideyo
Yasuda
, and
Kinichiro
Oda
From the
Department of Biological Science and
Technology, Science University of Tokyo, Noda 278, Japan,
¶ Institute of Medical Science, Tokyo University, 4-6-1 Shiroganedai, Minato-ku 108, Japan, and
School of Life Science,
Tokyo University of Pharmacy and Life Science, Hachioji,
Tokyo 192-03, Japan
 |
ABSTRACT |
The human epidermoid carcinoma-derived cell line
MA1, established by introduction of the adenovirus E1A 12 S cDNA
linked to the hormone-inducible promoter, elicits apoptosis after
induction of E1A12 S in response to dexamethasone.
E1A expression caused accumulation of wild type p53 more than 10-fold
within 24 h after dexamethasone treatment. The cell lines that
express E1A mutants containing a deletion either in the amino terminus
or the conserved region 1 were unable to accumulate p53. p53
accumulated was degraded efficiently in vitro in the S10-0
extract (S10-0) prepared from MA1 cells in an ATP and
ubiquitin-dependent manner, but not in S10-24 prepared
after treatment with dexamethasone for 24 h. The p53
polyubiquitination activity in S100-0 was
calcium-dependent and reduced greatly in S100-24.
Ubiquitin affinity chromatography revealed that p53 ubiquitination
activity in eluates thought to contain ubiquitin-conjugating enzymes
decreased greatly in S100-24 as compared with S100-0. The
accumulation of p53 was accompanied by the increase in the level of
Mdm2, which has been shown to degrade p53 through binding to it. The
high p53 level, however, was maintained until the late stage of the
apoptotic process. These results indicate that the stabilization of p53
by E1A occurs through modification of a ubiquitin-specific enzyme(s) in
the ubiquitin-proteasome pathway.
 |
INTRODUCTION |
The p53 protein, one of the tumor suppressors is primarily
involved with the maintenance of genomic integrity. The level of wild
type p53 in cells is maintained at a low level due to a short protein
half-life but is increased steeply by stabilization in response to
external stress signals, e.g. ionizing radiation (1-5). p53
functions at G1 cell cycle checkpoint and arrests the
damaged cells before entering S phase until DNA damage is repaired
(6-8). Loss of p53 function therefore results in accumulation of
mutations that lead the cells to malignancy (9). This
p53-dependent growth arrest is mediated by the activation
of the gene encoding cyclin-dependent kinase inhibitor p21
(10-15).
The function of p53 is also involved in the signaling of apoptosis in
response to external stress signals such as toxic insults that damage
DNA (3, 5, 16-18) and viral gene expression (19, 20). In the case of
the adenovirus E1A gene, the products E1A interact with multiple
cellular factors and perturb the regulation of cell growth and
differentiation, and in some cases they induce apoptosis in a wild type
p53-dependent manner (19-22). The E1A domain required for
induction of apoptosis has been recently mapped in the amino terminus
and conserved region 1 (CR1) (23, 24) that correspond to p300 binding
site (25). The region is also required for stabilization of p53 (20,
26, 27), although the precise mechanism of this stabilization has not
yet been clarified.
The turnover of p53 has been shown to be regulated by the
ubiquitin-dependent proteolysis system (28, 29). Ubiquitin
is first activated via thiolester formation with the
ubiquitin-activating enzyme
(E1)1 and then transferred to
members of the ubiquitin-conjugating enzyme family, E2s. E2s transfer
ubiquitin to specific substrates and form the polyubiquitin chain at a
particular Lys residue in collaboration with members of the ubiquitin
ligase family, E3s. The polyubiquitin chain targets the substrate for
degradation by the proteasome (30, 31). Wild-type p53 accumulates
markedly in a temperature-sensitive mutant of mouse BALB/3T3 cells at
the restrictive temperature owing to a defect in E1 (32). The
ubiquitin-mediated degradation of p53 is also shown by the action of
human papillomavirus E6 protein. E6 protein associates with cellular
E6-AP protein, a ubiquitin ligase (33), and targets p53 for degradation
(34). It has been recently shown that Mdm2, a nuclear phosphoprotein first identified as an oncoprotein (35) binds to p53 and targets it for
degradation by the ubiquitin-proteasome pathway (36, 37). In reverse,
the level of Mdm2 is regulated by p53, and the transcription of the
mdm2 gene is stimulated by p53 (38, 39). p53 is also a
substrate for cleavage by the calcium-activated protease, calpain
(40-43). Calpain activity is regulated by autoproteolysis and the
inhibitor protein calpastatin (44).
In the present study, the mechanism of wild type p53 stabilization in a
human epidermoid carcinoma cell line KB was studied with its derivative
cell line MA1, in which the expression of E1A can be regulated by
dexamethasone (45). The role of the amino terminus and CR1 of E1A was
studied by establishing the cell lines that express the mutant E1A
containing a deletion in either of these regions in response to
dexamethasone but fail to induce apoptosis. The results indicate that
stabilization of p53 occurred exclusively by modification of the
ubiquitin-proteasome pathway by E1A. The p53 polyubiquitination
activity was much reduced in MA1 cells after E1A expression.
Stabilization of p53 was accompanied by the elevation of Mdm2; however,
the high level of p53 was maintained thereafter, indicating that the
accumulated p53 is insensitive to the action of Mdm2 accumulated.
 |
EXPERIMENTAL PROCEDURES |
Materials--
Bovine erythrocyte ubiquitin, yeast apyrase,
creatine phosphokinase, and creatine phosphate were purchased from
Sigma. Proteasome inhibitor,
carbobenzoxy-L-leucyl-L-leucyl-L-norvalinal
(Z-LLnV-OH), was obtained from Peptide Institute (Tokyo, Japan).
Protein A-Sepharose FF beads were purchased from Amersham Pharmacia
Biotech. Calpastatin peptide (46) was synthesized with Fmoc
(N-(9-fluorenyl)methoxycarbonyl) amino acid derivatives on a
PerSeptive Biosystems 9050 synthesizer. After automatic synthesis,
protecting groups were removed and peptides were released from
supporting resins by treatment with trifluoroacetic acid (Kanto
Chemicals, Japan) in the presence of reducing agents. Biotinylated
ubiquitin was prepared from bovine erythrocyte ubiquitin by reacting
with Sulfo-NHS-LC-Biotin (Pierce) as described (47). Mouse
anti-adenovirus type 2 E1A monoclonal antibody (clone M73), anti-human
Mdm2 monoclonal antibody (SMP14), anti-human p53
NH2-terminal region monoclonal antibody (clone Bp53-12),
and rabbit polyclonal antibody for human p53 (FL-393) were purchased
from Santa Cruz Biotechnology, Inc. (Santa Cruz, CA). Mouse monoclonal
antibody to the COOH-terminal region of human p53 (pAb421) was
purchased from Oncogene Science. Horseradish peroxidase
(HRP)-conjugated goat anti-mouse immunoglobulin (Ig) was obtained from
Cappel. HRP-conjugated donkey anti-rabbit Ig, which has reduced
cross-reactivity with mouse, bovine, and human Igs, was purchased from
Chemicon. The ECL detection system was obtained from Amersham Pharmacia
Biotech.
Cell Lines--
MA1 cells were established from human epidermoid
carcinoma cell line KB by introducing the adenovirus E1A 12 S cDNA
linked to the mouse mammary tumor virus long terminal repeat. MA1 cells express E1A protein (E1A12 S) in response to dexamethasone
and elicit apoptosis (45). B12 and T5 cells were similarly established from KB cells by introducing mouse mammary tumor virus long terminal repeat-linked E1A 12 S cDNA containing a deletion either from codon
17 to 23 or 54 to 69, respectively (Fig. 1A). These cell lines were cultivated at 37 °C in Dulbecco's modified Eagle's medium supplemented with 10% fetal calf serum. For the viability assay, both floating and adherent cells were pooled and assessed by
trypan blue exclusion (45).
Construction of the Deletion Derivatives of E1A 12 S
cDNA--
For construction of E1A12S
17-23 cDNA
containing a deletion from codon 17 to 23, pBRE1A12S was cleaved at the
PvuII site between codons 22 and 23. The DNA was shortened
by successive digestion with ExoIII and mung bean nuclease
and circularized by blunt end ligation. The extent of deletion and the
joining of two ends in phase was confirmed by DNA sequencing. The
plasmid DNA was then cleaved with HindIII and
BglII, and the fragment containing the
E1A12S
17-23 cDNA was inserted between the
HindIII-BglII site of pMTV-dhfr (48), displacing
the dihydrofolate reductase cDNA to generate
pMTVE1A12S
17-23. E1A12S
54-69 cDNA
was constructed by using site-specific mutagenesis according to Kunkel
et al. (49). M13E1A12S was constructed by insertion of the
E1A 12 S cDNA at the KpnI-PstI site of
M13mp18. The sense strand of M13E1A12S was annealed with the 31-base
oligonucleotide lacking codons 54-69, and the antisense strand was
synthesized with T4 DNA polymerase and Escherichia coli DNA
ligase. The double-stranded DNA was then transfected to E. coli
ung+ cells (BMH71-18 mutS), and the
recombinant plasmid, M13E1A12S
54-69, was isolated. The
DNA was cleaved with HindIII and BglII, and the
fragment containing the E1A12 S cDNA
54-69 was
similarly inserted into pMTV-dhfr to generate
pMTVE1A12S
54-69.
Preparation of Cell Extracts--
Subconfluent cultures of MA1
cells, treated or untreated with 1 µM dexamethasone, were
washed twice in ice-cold phosphate-buffered saline (0.14 M
NaCl, 0.01 M potassium phosphate, pH 7.4), once in 10 volumes of ice-cold hypotonic buffer (20 mM Tris·HCl, pH 7.4, 5 mM MgCl2, 8 mM KCl, and 1 mM dithiothreitol (DTT)), and then resuspended in 10 volumes of hypotonic buffer. After incubation on ice for 15 min, the
swollen cells were collected in a 7.5-ml Dounce vessel and precipitated
by centrifugation at 200 × g for 2 min at 4 °C to
remove excess buffer. The cells were then disrupted by homogenization
with a tight pestle 40 times on ice. The homogenate was centrifuged
twice at 10,000 × g for 5 min, and the turbid supernatant (S10 extract) was collected. Aliquots of the S10 extracts were centrifuged at 105,000 × g for 6 h to
prepare the S100 extracts, which lack most of the proteasome
activity.
Western Blotting--
25-50 µg of protein in SDS-solubilized
whole cell lysate (45) were electrophoresed on 9% polyacrylamide gels
with Laemmli running buffer (25 mM Tris/glycine, pH 8.3, and 0.1% SDS) (50). Proteins were electrophoretically transferred to
nitrocellulose membranes and incubated in TBS-T (25 mM
Tris·HCl, pH 8.0, 137 mM NaCl, 2.7 mM KCl,
0.1% Tween 20) containing 5% skim milk and 0.1% thimerosal at room
temperature for 1 h to minimize nonspecific binding of antibody.
The membrane was incubated with primary antibody at an appropriate
dilution as indicated in the figure legends at room temperature for
1 h and washed three times in TBS-T for 15 min. The membrane was
then incubated with secondary antibody at a dilution of 1:10,000 at
room temperature for 1 h and washed three times in TBS-T for 15 min. Immune complexes were detected by ECL by treating the membrane
with the ECL detection system. Protein concentration was determined by
a dye-binding assay (51).
Immunoprecipitation of p53--
MA1 cells (approximately 2 × 108 cells) treated with dexamethasone for 24 h were
washed twice with ice-cold phosphate-buffered saline and lysed with 10 ml of RIPA buffer (2 mM Tris·HCl, pH 7.6, 5 mM EDTA, 150 mM NaCl, 1% Nonidet P-40, 1%
sodium deoxycholate, 0.025% SDS, 0.1 mM
4-(2-aminoethyl)-benzenesulfonyl fluoride·HCl). The lysate was
centrifuged at 1,700 × g for 10 min to remove cell debris. p53 was immunoprecipitated from supernatant with 10 µl of
pAb421 and 20 µl of protein A-Sepharose FF beads overnight. The
immunoprecipitate was washed four times with 10 ml of RIPA buffer,
resuspended in RIPA buffer to give a 10% suspension, and stored at
4 °C. The immunoprecipitate was washed three times with hypotonic
buffer and resuspended in the same buffer to a final concentration of
0.5% just before the degradation assay.
Ubiquitin Affinity Column--
Ubiquitin-Sepharose beads (~25
mg of ubiquitin/ml of swollen gel) were prepared as described by
Ciechanover et al. (52). 4 ml of swollen ubiquitin-Sepharose
beads were stuffed in a 16/10 column (Amersham Pharmacia Biotech) and
equilibrated with 15 ml of buffer A (50 mM Tris-HCl, pH
7.2, 10 mM MgCl2, 0.2 mM DTT) containing 2 mM ATP. 15 mg of protein of S100-0 and
S100-24 were incubated after the addition of 10 mM DTT on
ice for 30 min to dissociate ubiquitin conjugates of E1 and E2s, and
endogenous ubiquitin was removed by ultrafiltration with Macrosep-10k
after 1:40 dilution with buffer A. The samples were concentrated to a
final volume of 2 ml. The samples were mixed with an equal volume of
buffer A containing 4 mM ATP, 20 mM
phosphocreatine, and 10 units/ml inorganic pyrophosphatase and applied
to the ubiquitin-Sepharose columns after the removal of insoluble
materials by centrifugation at 15,000 × g for 15 min.
After unadsorbed fractions were collected, the columns were washed with
24 ml of buffer A containing 2 mM ATP, and adsorbed
components were eluted with 12 ml of 1 M KCl in 50 mM Tris-HCl, pH 7.2 (KCl fraction), 12 ml of 50 mM Tris-HCl, pH 7.2, 12 ml of 2 mM AMP in 50 mM Tris-HCl, pH 7.2, containing 40 µM sodium
pyrophosphate (AMP fraction), 12 ml of 10 mM DTT in 50 mM Tris-HCl, pH 7.2 (DTT fraction) and 12 ml of 2 mM DTT in 50 mM Tris-HCl, pH 9.0 (pH 9 fraction). Fractions of 4 ml were collected at a flow rate of 0.2 ml/min. The AMP, DTT, and pH 9 fractions were combined and concentrated
by ultrafiltration with Macrosep-10k (Pall Filtron). The salts in the
eluates were removed by another ultrafiltration to a final volume of
0.4 ml with Microsep-1k (Pall Filtron) after 1:100 dilution with
hypotonic buffer.
Degradation and Ubiquitination Assays of p53--
Degradation of
p53 was performed in either the S10 or the S100 extracts. The latter
lacks most of the proteasome. Ubiquitination of p53 was carried out
with the S100 extracts.
For degradation assays in the S10 extract, the reaction mixture (20 µl) contained 40 mM Tris·HCl, pH 7.6, 5 mM
MgCl2, 100 mM NaCl, 2 mM DTT, 2 mM ATP, 20 mM phosphocreatine, 0.2 unit/µl creatine phosphokinase, 0.2 µg/µl bovine erythrocyte ubiquitin, and
150 µg of protein in S10. The degradation in the S100 extract was
performed in the reaction mixture (6-30 µl) containing 40 mM Tris·HCl, pH 7.6, 5 mM MgCl2,
100 mM NaCl, 2 mM DTT, and 30-150 µg of
protein in S100. The reaction was carried out at 37 °C for 20 min or
at 30 °C for 40-80 min and terminated by boiling the mixture for 5 min after the addition of an equal volume of 2× Laemmli sample buffer
(280 mM Tris·HCl, pH 6.8, 200 mM DTT, 4% SDS, 12% glycerol, 0.01% bromphenol blue) (50). Aliquots of the
mixture were subjected to Western blotting using anti-p53 polyclonal
antibody FL-393 and HRP-conjugated secondary antibody to rabbit
IgG.
For ubiquitination assays, the reaction mixture contained 40 mM Tris·HCl, pH 7.6, 5 mM MgCl2,
100 mM NaCl, 2 mM DTT, and 0.2 µg/µl
biotinylated ubiquitin, 200 µg of protein in S100-24 as a source of
p53 and 1 mg of protein in S100-0. S100-0 was prepared from MA1
cells, and S100-24 was prepared from MA1 cells treated with
dexamethasone for 24 h. The reaction was carried out at 30 °C for 30 min and terminated on ice for 5 min. After the addition of
4-fold volumes of RIPA buffer to the reaction mixture, both ubiquitinated and unprocessed p53 were immunoprecipitated at 4 °C for 3 h with 1 µl each of pAb421 and Bp53-12 and 2.5 µl of
protein A-Sepharose FF beads. The immunoprecipitates were washed four times with 1 ml of RIPA buffer and then boiled after the addition of 40 µl of 2× Laemmli sample buffer for 5 min. Aliquots of 10 µl of the
sample were subjected to Western blot analysis. Ubiquitinated p53 was
detected by HRP-conjugated streptavidin, and unprocessed p53 was
detected by anti-p53 polyclonal antibody FL-393 and HRP-conjugated secondary antibody to rabbit IgG.
 |
RESULTS |
The Amino Terminus and CR1 of E1A Are Required for Accumulation of
p53--
The MA1 cell line, established from human epidermoid
carcinoma KB cells by introducing the mouse mammary tumor virus long terminal repeat-linked E1A 12 S cDNA, elicited apoptosis following the induction of E1A12 S in response to dexamethasone and
began to lose viability after about 36 h (Fig.
1B). Western blot analysis showed that after induction of E1A expression, the level of p53 increased steeply and reached a maximal level of more than 10-fold higher than the original at 24 h (Fig. 1C), while the
level of p53 mRNA was unchanged (45). Subsequently, topoisomerase
II
began to be degraded via the ubiquitin-proteasome
pathway reducing the level to
of the original as previously shown (45, 47, 53).

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Fig. 1.
The E1A amino terminus and CR1 responsible
for induction of apoptosis is required for stabilization of p53 and
degradation of topoisomerase II . A, functional
domains of E1A12S. The amino terminus (amino acids 1-40)
and CR1 are required for binding to p300. The domains required for
induction of apoptosis, defined by White et al. (23) and
Mymryk et al. (24), are shown by the thick
lines below the map of E1A12
S. The mutant cDNAs, E1A12S 17-23 and
E1A12S 54-69, containing a deletion from codon 17 to 23 and from codon 54 to 69 are shown at the bottom.
B, inability of E1A mutants to induce apoptosis. Sparse
cultures of MA1, B12, and T5 cells were treated with 1 µM
dex and harvested at the times indicated. The latter two cells express
E1A12S 17-23 and E1A12S 54-69,
respectively, in response to dexamethasone. Cell viability was
determined by trypan blue exclusion and expressed as the percentage of
the total cell number. C, inability of
E1A12S 17-23 and E1A12S 54-69 to
stabilize p53 and to induce degradation of topoisomerase II . The S10
extracts were prepared from MA1, B12, and T5 cells after treatment with
dexamethasone. Aliquots of 50 µg of protein/lane were
electrophoresed, and E1A, p53, and topoisomerase II were quantified
by Western blotting. The levels of these proteins are shown as relative
values.
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The E1A domain required for the induction of apoptosis has been mapped
in the amino terminus and CR1 (23, 24). These regions are required for
binding to p300 (Fig. 1A) (25). To analyze the function of
this domain, the expression vectors, pMTV-E1A
17-23 and
pMTV-E1A
54-69, that express E1A12S lacking the codons
between 17 and 23 and between 54 and 69, respectively in response to
dexamethasone (dex) (Fig. 1A), were introduced
into KB cells with pSV2neo (54), and the cell lines B12 and T5 were
established. Upon treatment with dexamethasone, both cells expressed
mutant E1A (Fig. 1C) but failed to induce apoptosis (Fig.
1B). Neither accumulation of p53 nor degradation of
topoisomerase II
was induced significantly (Fig. 1C).
These results indicate that the function of the amino terminus and the
CR1 of E1A is required for stabilization of p53, and the increase in
the p53 level correlates with the induction of topoisomerase II
degradation.
p53 Is Degraded by the Ubiquitin-Proteasome System in MA1
Cells--
Although the mechanism of induction of p53 stabilization by
E1A has not yet been clarified, it has been shown that p53 is degraded
either by the ubiquitin-proteasome system or by calpain in a
calcium-dependent manner. To determine the involvement of the ubiquitin-proteasome system and/or calpain in p53 degradation, the
S10 extracts were prepared from MA1, B12, and T5 cells before and after
treatment with dexamethasone, and p53 levels in these cell extracts
were directly compared by Western blotting. p53 was scarcely detected
in the extracts prepared from these cells before treatment with
dexamethasone. Only the case of the MA1 0 h extract (S10-0) is
shown in Fig. 2A,
lane 1. The p53 level in the MA1 24-h extract
(S10-24), prepared after treatment with dexamethasone for 24 h,
was almost 50-fold higher than the original level (lane
2), while those in B12 and T5 48-h extracts, prepared from
B12 and T5 cells treated with dexamethasone for 48 h, were very
low and similar to the original level (lanes 3 and 4).

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Fig. 2.
Degradation of p53 in MA1 cells occurs
predominantly by the ubiquitin-proteasome pathway. A,
the p53 levels in MA1, B12, and T5 cells. The p53 levels in the S10
extracts (50 µg of protein) prepared from MA1 cells before (0 h) and
after (24 h) treatment with dexamethasone (dex)
(lanes 1 and 2) and from B12 and T5
cells treated with dexamethasone for 48 h (lanes
3 and 4) were analyzed by Western blotting with
anti-p53 monoclonal antibody Bp53-12 and HRP-conjugated anti-mouse-Ig
antibody. B, effects of various protease inhibitors on
degradation of p53. Aliquots of the MA1 24-h extract (S10-24, 50 µg
of protein) containing accumulated p53 were incubated in the MA1 0-h
extract (S10-0, 250 µg of protein) in the presence of 2 mM ATP and 0.4 µg/µl ubiquitin. The concentrations of
proteasome and calpain inhibitors added are as follows: Z-LLnV-OH, 50 µM; apyrase, 0.125 units/µl; calpastatin peptide, 100 µM, and EGTA, 5 mM. The amounts of p53
undegraded were analyzed by Western blotting with anti-p53 polyclonal
antibody FL-393 and HRP-conjugated anti-rabbit IgG antibody.
C, degradation of p53 in S100-0 in the presence of
CaCl2. Aliquots of immunoprecipitated p53 were incubated in
the S100 extract prepared from MA1 cells (S100-0; 500 µg of protein)
at 30 °C for 80 min in the presence of 1 mM
CaCl2 and inhibitors as indicated above each
lane. No ATP and ubiquitin were added. The amounts of p53
undegraded were analyzed as stated above.
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The degradation reaction of p53 in vitro was performed by
incubating an aliquot of S10-24 as a source of p53 in S10-0 at
30 °C for 80 min in the presence of 2 mM ATP, 0.4 µg/µl ubiquitin, and various protease inhibitors. After the
reaction, the mixture was subjected to SDS-polyacrylamide gel
electrophoresis (SDS-PAGE), and the amount of p53 undegraded was
analyzed by Western blotting (Fig. 2B). Under these
conditions, most of p53 was degraded (lane 2).
The presence of Z-LLnV-OH, a proteasome inhibitor or apyrase that
destroys ATP, suppressed p53 degradation almost completely (lanes 3 and 4), while the presence of
calpastatin peptide, an inhibitor of calpain or EGTA that chelates with
calcium protected p53 from degradation only slightly (lanes
5 and 6).
To assay the calpain activity for degradation of p53 in the absence of
the proteasome, the S100 extract (S100-0), which lacks most of the
proteasome, was prepared from MA1 cells, and p53 was prepared by
immunoprecipitation with mouse anti-p53 monoclonal antibody pAb421 and
protein A-Sepharose FF beads. The p53 conjugated beads were incubated
in S100-0 at 30 °C for 80 min in the presence of 1 mM
CaCl2 but in the absence of ATP and ubiquitin. Degradation of p53 was analyzed by Western blotting using rabbit anti-p53 polyclonal antibody FL393 after electrophoresis (Fig. 2C).
Under these conditions, a small but significant fraction of p53 was degraded (lane 2). Calpastatin peptide
(lane 3) and EGTA (lane 5)
protected p53 from degradation significantly, but the presence of
apyrase (lane 4) and EDTA (lane
6) had no effect on the protection. These results suggested
that the degradation of p53 in MA1 cells occurs primarily by the
ubiquitin-proteasome system, although calpain is partly involved.
The Amino Terminus and CR1 Mutants of E1A Are Unable to Modify the
Ubiquitin-Proteasome Pathway to Stabilize p53--
The presence of a
very small amount of p53 in B12 and T5 cells after treatment with
dexamethasone suggested that the E1A mutants containing a deletion in
either the amino terminus or CR1 are unable to modify the
ubiquitin-proteasome pathway so as to suppress the proteolytic activity
for p53. To see the ubiquitin-dependent proteolytic
activity for degradation of p53, an aliquot of S10-24 (50 µg of
protein) containing accumulated p53 was incubated with increasing
amounts of B12 or T5 48 h extract (B12 S10-48 or T5 S10-48) in
the presence and absence of ATP and ubiquitin. As a control, S10-0 was
substituted for these extracts (Fig. 3).
Degradation of p53 was similarly analyzed by Western blotting. p53 in
S10-24 was degraded slightly by the addition of
of the
amount (10 µg) of protein in S10-0, but the fraction of p53 degraded
increased along with the increase in the amount of S10-0 added (Fig.
3A, lanes 2 and 4). No
significant degradation was observed in the absence of ATP and
ubiquitin (lane 1) and in the presence of
ubiquitin alone (lane 3). The degradation
occurred in the presence of only ATP (lane 2),
presumably due to residual ubiquitin present in the extracts. The
degradation of p53 occurred similarly by the addition of B12 S10-48 or
T5 S10-48 (Fig. 3B). The degradation proceeded even faster
than that caused by S10-0, and most of the p53 was degraded by the
addition of a 5-fold greater amount of protein in these extracts in the
presence of ATP (lanes 2 and 4), but
not in the absence of ATP (lanes 1 and
3). These results suggest that a component(s) of the
ubiquitin-proteasome pathway responsible for degradation of p53 is
inactivated or much reduced through the function of the amino terminus
and CR1 of E1A.

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Fig. 3.
Inability of E1A mutants to reduce the
ubiquitin-dependent proteolytic activity for p53.
A, the activity for degradation of p53 in MA1 cell extracts.
The S10 extracts were prepared from MA1 cells (0 h) and MA1 cells
treated with dexamethasone (dex) for 24 h. Aliquots of
50 µg of protein in the MA1 24-h extract (S10-24) were incubated
with 0.2-5-fold amounts of protein in the MA1 0-h extract (S10-0) at
30 °C for 90 min as shown on the left in the presence (+)
or absence ( ) of ATP (2 mM) and ubiquitin (0.4 µg/µl). Aliquots of the reaction mixtures were electrophoresed
followed by Western blotting as described in Fig. 2. B,
inability of E1A12S 17-23 and
E1A12S 54-69 to suppress the proteolytic activity for
p53 cells. The MA1 24 h extract (50 µg of protein) was incubated
with 0.2-5-fold amounts of protein in either the B12 48 h extract
or the T5 48 h extract. p53 was similarly analyzed by Western
blotting.
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The Ubiquitination Activity for p53 Is Reduced by E1A--
To
analyze the intermediates of p53 degradation and its proteolytic
cleavage products, an aliquot of 25 µg of protein in S100-24, prepared from the MA1 S10-24 by high speed centrifugation, was used as
a source of p53 and incubated with increasing amounts of S100-0 in the
absence of added ATP and ubiquitin. The reaction was first performed at
37 °C for 20 min, and aliquots of the reaction mixture were analyzed
by SDS-PAGE. p53 and its cleavage products were detected by Western
blotting using anti-p53 antibody FL-393. As shown in Fig.
4A, most of p53 remained
uncleaved in the absence of CaCl2 (lane
1). Two or three thin bands that migrated slightly faster
than p53 were observed, irrespective of the amounts of S100-0 added in
the presence of CaCl2 (lane 2). These
species of proteins seem to be the fragments of p53 cleaved by calpain, since the addition of EGTA or calpastatin peptide (lanes
3 and 4) abolished the generation of these
species of proteins. Calpain usually degrades its substrates to limited
extents (42). Unexpectedly, a large proportion of p53 was shifted to
the high molecular weight region in the presence of CaCl2
(lanes 2 and 4). The shift was dependent on calcium, since the presence of 5 mM EGTA
abolished the formation of the high molecular weight form of p53 almost completely (lane 3). The presence of calpastatin
peptide had no effect on this shift (lane 4). In
the high molecular weight region shown by a caret,
ladder-like bands were observed, suggesting that these are
polyubiquitinated p53. The polyubiquitination might be caused by
residual ATP and ubiquitin present in the extracts. The amount of high
molecular weight form of p53 increased slightly along with the increase
in the amount of S100-0 added, presumably due to the increase in the
amounts of ATP and ubiquitin supplied in addition to the increase in
the ubiquitination enzymes. The S100-0-dependent formation
of the high molecular weight form of p53 became more evident when the
reaction proceeded at a slower rate at 30 °C (Fig. 4A).
When
of the amount of S100-0 was mixed with S100-24, a
very small amount of p53 was converted to the high molecular weight
form, while the addition of a 5-fold greater amount of S100-0 resulted
in the conversion of most of p53 in the presence of CaCl2
(lanes 6 and 8). Under these
conditions, a very small amount of p53 was fragmented, again irrespective of the amounts of S100-0 added. These results suggest that the formation of the high molecular weight form of p53 is much
more dependent on the reaction temperature than the fragmentation of
p53 by calpain and occurs in a dose-dependent manner. The
requirement of calcium for the ubiquitin-dependent
degradation of cyclin B has been reported in the Xenopus
extract (55). The conversion of p53 to the high molecular weight form
was also analyzed with B12 and T5 S100-48 prepared from B12 and T5
cells treated with dexamethasone for 48 h in place of S100-0. As
shown in Fig. 4B, the addition of a 5-fold greater amount of
B12 S100-48 or T5-S100-48 to MA1 S100-24 in the presence of
CaCl2 resulted in the conversion of most of p53 to the high
molecular weight form. These results indicate that E1A mutants
containing a deletion in either the amino terminus or CR1 are unable to
repress the conversion of p53 to the high molecular weight form.

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Fig. 4.
Calcium-dependent formation of
the high molecular weight form of p53 in MA1, B12, and T5 cell
extracts. Aliquots of 25 µg of protein in MA1 S100-24
containing accumulated p53 were incubated with 0.2-5-fold amounts of
protein in MA1 S100-0 at 37 °C for 20 min or at 30 °C for 80 min
in the presence and absence of 1 mM CaCl2.
Inhibitors of calpain, EGTA, and calpastatin peptide were added to
lanes 3 and 4, respectively. Aliquots
of the mixture containing 7.5 µg of protein from MA1 S100-24 were
electrophoresed, and p53 was analyzed by Western blotting using
anti-p53 antibody (FL-393) and HRP-conjugated anti-rabbit-IgG antibody.
B, the same amounts of MA1 S100-24 were incubated with
5-fold amounts of protein in either B12 S100-48 or T5 S100-48
prepared from B12 and T5 cells treated with dexamethasone
(dex) for 48 h at 30 °C for 80 min. p53 was
similarly analyzed.
|
|
To confirm that the high molecular weight form of p53 is
polyubiquitinated p53, p53 in S100-24 (200 µg of protein) was
incubated with a 5-fold greater amount of S100-0 and biotinylated
ubiquitin in the absence of added ATP at 30 °C for 40 min (Fig.
5). Calpastatin peptide and Z-LLnV-OH
were added to minimize p53 degradation. The biotinylated ubiquitin
conjugates of p53 were immunoprecipitated using mouse anti-p53
monoclonal antibodies (pAb421 and Bp53-12) and protein A-Sepharose FF
beads and subjected to SDS-PAGE. The biotinylated ubiquitin conjugates
of p53 were analyzed by Western blotting using HRP-conjugated
streptavidin, which binds to biotin. As shown in Fig. 5A,
streptavidin revealed biotinylated ubiquitin conjugates of p53 in a
wide range, and a series of ladder-like bands was observed
(lane 2). The formation of these conjugates was
stimulated by CaCl2 (lane 3).
Residual amounts of ATP and ubiquitin present in S100-0 and S100-24
seemed to be sufficient for polyubiquitination of p53. The presence of
EGTA, which chelates with calcium, greatly reduced the amounts of
polyubiquitinated p53 formed (lanes 4 and
5), but the presence of an excess of CaCl2 partially overcame the effect of EGTA (lane 6).
When the reaction was performed with S100-24 alone in the absence of
CaCl2 (lane 7), p53 was not
polyubiquitinated at all; however, in the presence of CaCl2
a much smaller yet significant amount of polyubiquitinated p53 was
formed (lane 8). These results indicate that the
ubiquitination activity for p53 is still present in S100-24, although
the activity is much reduced and strictly dependent on calcium. The
amounts of unubiquitinated p53 remained were inversely correlated with the amounts of polyubiquitinated p53 (Fig.
6B, lanes
2, 3, and 6).

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Fig. 5.
Calcium-dependent
polyubiquitination of p53 in MA1 S100 extract. Aliquots of 0.2 mg
of protein in S100-24 were incubated with 1 mg of protein in S100-0
and 0.2 µg/µl biotinylated ubiquitin at 30 °C for 30 min in the
presence and absence of CaCl2 and EGTA as indicated
above each lane. In lanes 7 and 8, S100-24 alone was similarly incubated. After the
reaction, p53 was immunoprecipitated with 1 µl each of the anti-p53
monoclonal antibodies pAb421 and Bp53-12 and 2.5 µl of protein
A-Sepharose FF beads. The precipitates were analyzed by Western
blotting. A, polyubiquitinated p53 was detected with
HRP-conjugated streptavidin. B, unprocessed p53 was detected
with anti-p53 polyclonal antibody FL-393 and HRP-conjugated anti-rabbit
IgG antibody.
|
|

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Fig. 6.
Fractionation of p53 ubiquitination activity
in MA1 cells by affinity chromatography. A,
ubiquitin-Sepharose chromatography of S100-0 and S100-24. Aliquots of
15 mg of protein were applied to the columns. The flow-through fraction
and KCl, AMP, DTT, and pH 9 eluates were collected. The elution profile
of S100-0 proteins is shown. The profile of S100-24 proteins is
essentially the same. B, stimulation of p53
polyubiquitination by the eluates. The AMP, DTT, and pH 9 eluates were
combined, and aliquots of 14 ng of protein prepared from S100-0 and
S100-24 were added to S100-24 (25 µg of protein) containing
accumulated p53 and incubated at 30 °C for 40 min in the absence of
added ATP and ubiquitin. CaCl2, EGTA, and calpastatin
peptide were added as indicated above each lane.
Aliquots of a third of the mixture were subjected to SDS-PAGE, and
polyubiquitination of p53 was analyzed by Western blotting using
anti-p53 antibody (FL-393) and HRP-conjugated anti-rabbit IgG
antibody.
|
|
The Ubiquitin-specific Enzyme Activity Responsible for Degradation
of p53 Is Reduced by E1A--
The recognition of a target protein for
degradation by the ubiquitin-proteasome system is usually made by the
degradation signal present in a target protein and a
ubiquitin-conjugating enzyme (E2), which transfer the activated
ubiquitin to a Lys residue of a target protein (31). A ubiquitin ligase
(E3) is often required for the ubiquitination of the Lys residue. Both
the E2 and E3 enzyme families consist of multiple members, and each
member recognizes a set of target proteins (56).
To see whether the activity of a ubiquitin-conjugating enzyme(s)
responsible for polyubiquitination of p53 is reduced in MA1 cells
following induction of E1A, S100-0 and S100-24 were applied to
ubiquitin-Sepharose columns in the presence of ATP. The bound proteins
were sequentially eluted with high salt (1 M KCl), 20 mM AMP, 10 mM DTT, and pH 9 solution as shown
in Fig. 6A. The bulk of proteins were collected in the
flow-through fraction. Most of the E3 enzymes are recovered in the
flow-through fraction, and most of the E2 enzymes are eluted in the
AMP, DTT, and pH 9 fractions (57). The ubiquitin-activating enzyme E1
is eluted mostly in the AMP fraction. The AMP, DTT, and pH 9 fractions
were combined and concentrated by ultrafiltration. S100-24 (25 µg of protein) containing accumulated p53 was incubated with aliquots of the
concentrated eluates Ub eluate-0 and Ub eluate-24; the latter was
prepared from S100-24 and would have reduced enzyme activity involved
in polyubiquitination of p53. The reaction was performed at 30 °C
for 40 min in the presence and absence of 1 mM
CaCl2, and the mixture was subjected to SDS-PAGE followed
by Western blotting. As shown in Fig. 6B, the addition of
both eluates stimulated polyubiquitination of p53 in the presence of
CaCl2; however, the activity was much reduced in Ub
eluate-24 as compared with Ub eluate-0. The polyubiquitination was
completely abolished by the presence of EGTA but not by the presence of
calpastatin peptide. Polyubiquitination of p53 scarcely occurred in
S100-24 alone even in the presence of CaCl2. These results
suggest that a component(s) of the ubiquitin-proteasome pathway,
presumably a member of the E2 family, required for p53
polyubiquitination is altered by E1A either in the level of its
expression or in its activity so as to stabilize p53.
Stabilization of p53 in MA1 Cells Accompanies the Increase in the
Mdm2 Level--
The stabilization of p53 has been shown to be
regulated by Mdm2, a nuclear phosphoprotein that binds to p53 through
its amino terminus. p53 bound by Mdm2 is targeted for degradation by
the ubiquitin-proteasome pathway, and the pathway is continuously operating in cells to lower the levels of p53 (36, 41). In reverse, the
expression of Mdm2 is transcriptionally activated by p53 (38, 39). To
see the involvement of Mdm2 in the E1A-induced stabilization of p53,
the levels of Mdm2 and E1A in MA1 cells were analyzed by Western
blotting after treatment with dexamethasone. As shown in Fig.
7, A and C, the
level of p53 increased linearly after induction of E1A, reaching a
plateau at 16-20 h. The level of Mdm2 began to increase after p53
reached its maximal level, suggesting that the transcriptional
activation of the mdm2 gene by p53 also occurs in MA1 cells
after p53 stabilization. The level of p53, however, did not decline
after maximal elevation of Mdm2. The high level of p53 was maintained
throughout the apoptotic process at least until 72 h as previously
shown (45). The low level of p53 in untreated MA1 cells at 0 h
(lane 1), however, was maintained primarily by
the ubiquitin-proteasome system, since the addition of Z-LLnV-OH to the
culture medium elevated the p53 level to almost the maximum
(lane 8). The very low level of Mdm2 in the
untreat cells suggests that Mdm2 may not be involved in lowering the
p53 level and that E1A antagonizes the ubiquitin-proteasome pathway to
reduce the activity to target p53 for degradation.

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Fig. 7.
Stabilization of p53 in vivo and
its relation to expression levels of E1A and Mdm2. MA1 cells were
treated with 1 µM dexamethasone, and aliquots of the
cells were harvested and lysed at the times indicated above
each lane. The lysates were boiled after the addition of an
equal volume of 2× Laemmli sample buffer and subjected to SDS-PAGE.
The amounts of p53 (A), Mdm2 (B), and E1A
(C) were estimated by Western blotting using rabbit anti-p53
polyclonal antibody FL-393, mouse anti-Mdm2 monoclonal antibody SMP14,
and mouse anti-E1A monoclonal antibody M73, respectively.
HRP-conjugated anti-rabbit IgG and HRP-conjugated anti-mouse Ig
antibodies were used as secondary antibodies. In lanes
8 and 9, 50 µM Z-LLnV-OH was added
to the culture medium 1 h before the cell harvest.
|
|
 |
DISCUSSION |
Stabilization of p53 seems to be one of the cellular responses to
external stress signals that cause DNA damage such as ionizing radiation (1-5) and viral infection (58-61). Elevation of the p53
level by DNA-damaging agents often results in the arrest of cell cycle
progression in G1, preventing the damaged cells to enter S
phase (7, 8). p53 acts therefore as a guardian to maintain the genomic
integrity. Alternatively, elevation of the wild type p53 level in
rodent cells by the adenovirus E1A results in the induction of
apoptosis (19, 20), which might be a cellular defense mechanism to
prevent virus growth.
The cell line MA1 used in the present study expresses adenovirus
E1A12 S in response to dexamethasone and elicits apoptosis. Following induction of E1A, the level of p53 increased more than 10-fold within 24 h. The accumulated p53 was degraded efficiently in vitro in the S10-0 extract prepared from MA1 cells, but
not in the S10-24 extract prepared from MA1 cells after treatment with
dexamethasone for 24 h. The degradation was protected almost completely by the presence of Z-LLnV-OH or apyrase, both of which inhibit ubiquitin-proteasomedependent proteolysis, but
protected only weakly by the presence of EGTA or calpastatin peptide,
which inhibits calpain protease activity (Fig. 2). The accumulation of
p53 was inversely correlated with the extent of polyubiquitination. The
ubiquitination activity for p53 in MA1 cells was much reduced after
induction of E1A, but the activity in B12 and T5 cells, which express
E1A mutants having a deletion in the amino terminus or CR1 in response
to dexamethasone, was unchanged (Figs. 4 and 5). No p53 accumulation
was observed in these cells. Since these regions correspond to the p300
binding site, interaction of E1A with p300 might be involved in a
modification of the ubiquitin proteasome pathway so as to reduce p53
breakdown.
Polyubiquitination of p53 in S100-0, prepared from the S10-0 extract
by high speed centrifugation and devoid of most of the proteasome, was
enhanced greatly by CaCl2. Similar requirement of calcium
for ubiquitin-dependent degradation of cyclin B has been
reported in the Xenopus extract (55). In the extract
prepared from metaphase II-arrested Xenopus eggs,
degradation of cyclin B occurs at micromolar free Ca2+
concentration in the presence of calpastatin, an inhibitor of calpain.
When free Ca2+ is raised to millimolar range, cyclin B is
also degraded by calpain. In the MA1 S10-0 extract, however, the
reduction in Ca2+ concentration from 1 to 0.1 mM resulted in the decrease in the extent of p53
polyubiquitination to less than a half of the original in the presence
of calpastatin peptide. A calcium-activated protease, calpain, is also
involved in p53 degradation, but its contribution was minor, and the
calpain activity was not altered after E1A expression.
The ubiquitin-specific enzyme activity involved in stabilization of p53
by E1A was analyzed by ubiquitin affinity chromatography. The enzymes
in S100-0 and S100-24 prepared from MA1 cells before and after
treatment with dexamethasone were applied to ubiquitin affinity
columns, and bound enzymes were eluted by AMP, which competes with ATP,
by increased concentration of a thiol compound, DTT, and by raising the
pH. These fractions combined contain E1, most of the E2s and a portion
of the E3s. The addition of the combined eluate to the in
vitro p53 polyubiquitination reaction mixture (Fig. 6) revealed
that the polyubiquitination was enhanced greatly when the eluate
prepared from S100-0 was added, but this activity was much reduced in
the eluate prepared from S100-24. This result suggests that
ubiquitination of p53 might be suppressed by reduction either in the
activity or in the expression level of a component in the
ubiquitin-proteasome pathway, presumably a member of the
ubiquitin-conjugating enzyme E2 family. In the case of ubiquitination
of p53 by human papillomavirus E6, E6 first associates with E6-AP, a
member of E3 ubiquitin ligases, and the resulting complex interacts
with p53 to induce the ubiquitination (33). A cellular fraction thought
to contain an E2 enzyme is required for this ubiquitination. A human
E2, UbcH5 can function in the E6/E6-AP-mediated ubiquitination of p53,
and this function could be replaced with Ubc8 from Arabidopsis
thaliana (62). The expression level of UbcH5 in MA1 cells, so far
tested by Northern blotting, was unchanged after treatment with
dexamethasone (data not shown). A set of different members of E2s may
be involved in polyubiquitination of p53, depending on a respective
partner of the E3 family. We recently found that a species of E2 enzyme presumably involved in degradation of topoisomerase II
is induced in
MA1 cells after E1A expression (47).
The Mdm2 oncoprotein is a potent inhibitor of p53 and inhibits the
p53-dependent transcription of target genes through binding to the NH2-terminal transactivation domain (63). In
addition, Mdm2 promotes the proteasome-dependent
degradation of p53 through binding to it and thus terminates the p53
response to external signals (36, 37). On the other hand, p53 activates
the expression of the mdm2 gene (38, 39). In MA1 cells, the
level of p53 increased after expression of E1A, and the elevated p53,
in turn, promotes the expression of Mdm2 (Fig. 7). A high level of p53, however, was maintained irreversibly until the late stage of the apoptotic process (45). These results suggest the possibility that
either p53 or Mdm2 might be modified so as to make p53 insensitive to
the ubiquitin-proteasome pathway. It has been recently reported that
DNA-damaging agents induce stabilization of p53 through the activation
of DNA-dependent protein kinase, which phosphorylates serine residues in the amino-terminal region of p53 and impairs the
ability of Mdm2 to inhibit p53-dependent transactivation
(64). However, the involvement of modification of p53 in its
stabilization by E1A is unlikely, since p53 stabilized in MA1 cells was
susceptible to degradation in MA1 0-h extract (Fig. 2), and the level
of Mdm2 in MA1 cells was very low (Fig. 7).
The E1A-binding protein p300 and its related protein CBP have
properties with a transcriptional coactivator (65). They do not bind to
DNA but are recruited to promoters by association with transcription
factors such as CREB, c-Jun, c-Fos, and c-Myb (66). E1A dissociates the
complexes formed with p300/CBP and the transcription factors and
suppresses their negative regulation for cell cycle progression. The
E1A mutants containing a deletion in the amino terminus or CR1 lose the
ability to bind p300 and to suppress the negative role of p300/CBP in
cell proliferation. The transactivating function of p300/CBP complexed
with a transcription factor such as CREB or c-Jun might result in
activation of the gene encoding an enzyme involved in the
ubiquitin-proteasome pathway, which targets p53 for degradation, and
E1A may inhibit this transactivation through binding to p300.
 |
FOOTNOTES |
*
This work was supported by a grant-in-aid from the Ministry
of Education, Science and Culture of Japan.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
To whom correspondence should be addressed: Dept. of Biological
Science and Technology, Science University of Tokyo, Yamazaki, Noda-shi, Chiba 278, Japan. Tel: 81-471-24-1501 (ext. 4421); Fax: 81-471-25-1841; E-mail: nakajima{at}rs.noda.sut.ac.jp.
The abbreviations used are:
E1, ubiquitin-activating enzyme; E2, ubiquitin carrier protein; E3, ubiquitin-protein isopeptide ligase; Z-LLnV-OH, carbobenzoxy-L-leucyl-L-leucyl-L-norvalinalRIPA, radioimmune precipitationDTT, dithiothreitolHRP, horseradish
peroxidasePAGE, polyacrylamide gel electrophoresis.
 |
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