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J Biol Chem, Vol. 273, Issue 37, 24216-24222, September 11, 1998
Multiple Receptor Domains Interact to Permit, or Restrict,
Androgen-specific Gene Activation*
Arno
Scheller,
Elizabeth
Hughes,
Kish L.
Golden, and
Diane M.
Robins
From the Department of Human Genetics, University of Michigan
Medical School, Ann Arbor, Michigan 48109-0618
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ABSTRACT |
A critical problem within transcription factor
families is how diverse regulatory programs are directed by highly
related members. Androgen and glucocorticoid receptors (AR, GR)
recognize a consensus DNA hormone response element (HRE), but they
activate target genes with precise specificity, largely dependent on
the promoter and cell context. We have assessed the role of different receptor domains in hormone-specific response by testing chimeras of AR
and GR for their ability to activate the androgen-specific enhancer of
the mouse sex-limited protein (Slp) gene. Although all of
the mutant receptors activated simple HREs, only a few activated the
androgen-specific element. One component shared by receptors functional
on the AR-specific target was the AR DNA binding domain. Activation was
not due to differential DNA affinity but rather to the AR DNA binding
domain escaping suppression directed at the GR DNA binding domain in
this enhancer context. A further mechanism increasing specific
activation was cooperation of receptors at multiple and weak HREs,
which was accentuated in the presence of both the AR N terminus and
ligand binding domain. These domains together increased recognition of
weak HREs, as demonstrated by in vitro DNase I footprinting
and transactivation of mutant enhancers. Further, AR N-terminal
subdomains reported to interact directly with the ligand binding domain
relieved an inhibitory effect imposed by that domain. Therefore,
functions intrinsic to AR augment steroid-specific gene activation, by
evading negative regulation operating on the domains of other receptors
and by enhancing cooperativity through intra- and inter-receptor domain
interactions. These subtle distinctions in AR and GR behavior enforce
transcriptional specificity established by the context of nonreceptor
factors.
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INTRODUCTION |
Many developmental, reproductive, and homeostatic functions are
coordinated by steroid hormones via their specific receptors that
regulate gene expression (1). The basis for distinct physiological roles of each steroid remains enigmatic, because the highly conserved DNA binding domains (DBD)1 of
several receptors recognize a common hormone response element (HRE).
Multiple mechanisms, acting through distinct receptor domains, may
influence specificity. Notably, other transcription factors may
interact differentially with receptors, in part via dissimilar N-terminal transactivation domains. The DBDs may display differential affinities on nonconsensus HREs of natural promoters. Further, recently
discovered co-activators that interact broadly with conserved regions
of the ligand binding domain (LBD) may prove to discriminate among
receptors.
Steroid receptors interact directly with a variety of transcription
factors to elicit precise positive or negative regulation (2-4), and
these interactions can be highly context-dependent (5, 6).
Nevertheless, no factor has yet been shown to be required by a
particular receptor, or to be exclusive in its interactions. The
growing number of receptor co-activators and co-repressors (reviewed in
Refs. 7 and 8) do not resolve specific response, since they appear to
function widely across the nuclear receptor family through conserved
protein domains. However, some co-activators more limited in their
receptor associations have been described (9).
Some complex regulatory elements from genes that are androgen-specific
in vivo retain a specific steroid response when fused to
reporter genes, allowing examination of sequence requirements for
specificity (10-12). These enhancers require as yet unidentified DNA
binding factors for specific response, and characteristically depend on
multiple nonconsensus HREs, some of which bind androgen receptor (AR)
with higher affinity than glucocorticoid receptor (GR) (13-15). This
discrimination among variant HREs may prevent inappropriate hormonal
activation, and the difference may be amplified by multiple receptor
binding sites.
For AR, activity is modulated by interactions between distinct
functional domains of the homodimer. In particular, strong interaction
between the amino and carboxyl termini of AR has been implicated in
ligand binding, receptor stabilization, and enhanced transactivation
(16-20). Physical association between domains requires an intact LBD,
within which distinct surfaces are contacted, and multiple regions of
the N terminus (17, 19, 20). Within the AR N terminus, a
transcriptionally active discrete subdomain akin to the GR 1 (21)
has not been defined, but active regions have been revealed by their
deletion (18, 22, 23). Large N-terminal deletions render the receptor a
trans-dominant repressor of full-length AR (24). Surprisingly, the LBD
is most active in in vitro transcription (25), demonstrating
that isolated domains can have unexpected behaviors.
For androgen-specific response, the enhancer of the mouse sex-limited
protein (Slp) gene depends on a consensus HRE and multiple nonreceptor factor binding sites within a 120-bp DNA fragment (10). GR
not only fails to activate this enhancer in transfection, but blocks AR
activation, dependent upon an intact GR DBD. Subtle alterations in
sequence or position of the HRE, or inclusion of binding sites for
other factors, can reduce specificity and permit GR function (13). A
chimeric receptor that replaced the AR N terminus with that of GR
activated simple HREs but not the androgen-specific enhancer,
demonstrating importance of this region in selectivity (10). However,
the N terminus of AR before the DBD and LBD of GR was not sufficient to
activate the specific enhancer. To determine domain involvements in
specificity, we tested an array of chimeric receptors and find that
each domain plays a distinct role. The AR DBD escapes suppression of
activity that operates on the GR DBD in the context of the specific
enhancer. Perhaps more importantly, interactions within and between
receptors increase utility of nonconsensus HREs. This provides a
mechanism whereby a specific response can be generated by AR
cooperativity from multiple weak elements with poor affinity for
GR.
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MATERIALS AND METHODS |
Construction of Mutant Receptors--
The mouse androgen
receptor (mAR) and rat glucocorticoid receptor (rGR) cDNAs (26, 27)
(originally from D. Tindall and K. Yamamoto, respectively) were cloned
into the pCMV5 expression vector (28). Chimeric receptors were
generated by exchanging the N termini, DBD, or LBD of AR and GR. To
create a joint between the DBD and LBD, a BamHI site was
introduced by overlap extension PCR-mediated mutagenesis, at
Asn533 for GR and Asp634 for AR. Primers for
mutagenesis were (mutated bases are lowercase, BamHI sites
are underlined): mAR sense, 5'-CCC ACT GAG GAt CCA TCC CAG
A-3' (1891-1913); antisense, 5'-CTG GGA TGG aTC CTC AGT GGG-3' (1912-1891); rGR sense, 5'-CAC TTC GcA ggA TCC TAA
CAA AAC-3' (1587-1611); antisense, 5'-GTT TTG TTA GGA Tcc
TgC GAA GTG-3' (1611-1587). To retain similar rGR sequence character, Glu532 and Asn533 were changed to
Gln532 and Asp533. No amino acids were changed
in mAR. Primers for the other ends of the PCR products were directed at
the translation start codon (ATG), and were altered to
include a KpnI site overlapping a Kozak consensus: mAR
sense, 5'-ggc ggt acc gcc ATG GAG GTG CAG TTA
GGG-3'; rGR sense, 5'-ggc ggt acc gcc ATG GAC
TCC AAA GAA TCC-3'; and at the 3'-untranslated region (ending with an
XbaI site): mAR antisense, 5'-gcg tct aga GTT
ATA TAA CAG GCA GAA G-3'; rGR antisense, 5'-gcg tct aga GTT
CAA CTT TCT TTA AGG CAA C-3'.
The HindIII site in the first zinc finger was mutated to a
unique NheI site by PCR to create a
NheI-BamHI cassette of the DBD. The same
mutagenic primers were used for AR (Ser547) and GR
(Ser448), without changing the amino acid sequence of
either. mAR sense, 5'-GAT GAA GCT agc GGa TGT CAC TAC GG-3'
(1630-1656); mAR antisense, 5'-CCG TAG TGA CAt CCg ctA GCT
TCA TC-3' (1656-1630); rGR sense, 5'-GAT GAA GCT agc GGA
TGT CAc TAC GG-3' (1333-1359); rGR antisense, 5'-CCG TAg TGA CAT
CCg ctA GCT TCA TC-3' (1359-1333).
These first-round chimeric receptors were inserted into pCMV5 between
the KpnI and XbaI sites. The ends and junctions
of PCR fragments and the DBDs between the NheI and
BamHI sites were sequenced to ensure fidelity. Large
internal segments were then replaced with unmodified parent receptor
cDNA, to obviate extensive sequencing. The fragments were: a
1340-bp SmaI-MunI fragment of the AR N terminus, a 498-bp StuI-NdeI fragment of the AR LBD, a
1146-bp MscI-BspEI GR N-terminal fragment, and a
707-bp PstI-EcoRI GR LBD fragment. To enhance
utility of the DBD cassette, the BamHI site in the pCMV5
polylinker was eliminated by treatment of BamHI-cleaved vector with mung bean nuclease, followed by religation. Further, to
optimize equivalent expression of the receptors, which now had
identical short untranslated leader sequences, the cauliflower mosaic
virus ribosomal binding site was introduced at the EcoRI site in the polylinker of pCMV5: 5'-gaa ttc cTT TTT ATT TTT AAT TTT CTT
TCA AAT ACT TCC ATC gaa ttc-3'. For controls, mAR and rGR with the
introduced NheI and BamHI sites and common leader sequence were generated and denoted ARnb and GRnb.
mAR C was constructed by replacing the human 1685-bp
BglII-SacI fragment of AR707-ConAc
(the kind gift of M. Marcelli) (29) with that from mAR, in pCMV4T.
AR N-terminal sequences were introduced into the chimeric receptor GAA
via convenient restriction sites that maintained translational frame.
The first 37 amino acids of AR were placed at the N terminus of GAA
(A37GAA) by joining the SpeI-SmaI
fragment encompassing the pCMV5-ARnb promoter and N terminus to
SpeI-KpnI-digested GAA (fragments were rendered
blunt-ended by treatment with T4 DNA polymerase), introducing an
alanine between AR Pro37 and GR Met1.
G391aAA truncated the GR N terminus at the BspEI
site, which was filled and joined to ARnb at the HaeII site
at 1170, resulting in GR Gly391 fused to AR
Trp392; this deletes 45 residues of GR, and includes an
additional 144 residues of AR, before the DBD.
Construction of Mutant CAT Reporters--
The same primers used
to generate the linker scan mutants of C' 9 by overlap extension PCR
(13) were used to mutate HRE-1 (ls7) in the context of C' 9 mutants
in which the position of HRE-3 was altered by 10 bp (space 10, s10), to
generate s10-ls7.
Cells and Transfection--
CV-1 cells were grown and
transfected, and CAT activity assayed as described previously (13, 30).
Briefly, 9 µg of reporter DNA and 100 ng of pCMV5 receptor expression
plasmid were introduced by DEAE dextran into 106 CV-1 cells
in a 10-cm dish. Cells were grown 40 h with or without 10 7 M dexamethasone, or 10 8
M dihydrotestosterone (added every 12 h), in
Dulbecco's modified Eagle's medium plus 3% charcoal-stripped NuSerum
IV (Collaborative Research). Between 10 and 40 µg of cell protein
were assayed for CAT activity by the phase extraction method (31). Some
transfections as noted were performed by calcium phosphate
precipitation of the same amounts of reporter and receptor DNAs, and 2 µg of Rous sarcoma virus-luciferase plasmid. Cells were grown in 5%
charcoal-stripped NuSerum IV in Dulbecco's modified Eagle's medium,
with or without hormone as before, and glycerol-shocked after 16 h. 24 h later, cells were harvested for CAT activity in the cold
to stabilize luciferase.
Western Blot Analysis--
COS-7 cells at 50% confluence were
transfected by calcium phosphate precipitation of 20 µg of pCMV5
receptor DNA. 40 h post-transfection, and 4 h after addition
of hormone (10 7 M
dihydrotestosterone/10 7 M dexamethasone),
cells were harvested with 0.5 ml/10-cm dish of SDS-TEN buffer (62.5 mM Tris-HCl, pH 6.8, 10% glycerol, 2% sodium lauroyl
sulfate; 5% v/v -mercaptoethanol) (32). DNA was sheared by passing
the lysate four times through a 26-gauge needle, and proteins were
resolved by SDS-polyacrylamide gel electrophoresis. Gels were
electroblotted at 15 mA overnight onto BA-85S nitrocellulose (Schleicher & Schuell), which was then blocked with 5% nonfat milk in
Tween 20-Tris-buffered saline buffer. Receptors containing the AR N
terminus were revealed with a rabbit polyclonal antisera raised against
a glutathione S-transferase fusion protein containing mAR
residues 133-334 (33), while those with the GR N terminus were
detected with FIGR2 monoclonal antibody (34), a generous gift of W. Pratt. Antibody complexes were visualized with the Amersham
chemiluminescent kit.
DNase I Protection Analysis--
DNase I protection was
performed as described previously (15). Recombinant receptors were
obtained from Spodoptera frugiperda Sf9 cells
infected with baculoviruses (kindly provided by O. Janne), harboring
full-length (FL) rAR, rAR deleted between residues 46 and 408 ( N),
or rAR truncated at amino acid 788 ( C) (35). Cells were grown and
whole cell extracts prepared as described previously (36). After
dialysis in binding buffer (below) to remove ammonium sulfate, aliquots
were stored at 70 °C. For footprinting, increasing quantities of
whole cell extracts were mixed with binding buffer (20 mM
HEPES, pH 7.6, 50 mM KCl, 0.2 mM EDTA, 2 mM dithiothreitol, 20% glycerol), 1 µg of poly(dI-dC),
50 nM dihydrotestosterone, protease inhibitors (0.5 mM phenylmethylsulfonyl fluoride, 2 µg/ml leupeptin, 2 µg/ml pepstatin, 2 mM benzamidine, 20 milliunits/ml aprotinin), 0.05% Nonidet P-40, and 10,000 cpm of end-labeled DNA
probe. The probes were one or three copies of the consensus HRE-3
cloned into the BamHI site of tkCAT (30), the specific enhancer C' 9 (10), or C' 9 mutated at HRE-3 (ls9) or at the weak
HRE-1 (ls7). Probes were end-labeled with 32P by
polynucleotide kinase at the MluI site and excised with
PvuII. After binding the cell extracts to the probe for
3 h on ice, MgCl2 and CaCl2 were added to
2 mM each, and varying concentrations of DNase I added for
5 min on ice. The reactions were terminated, deproteinized,
concentrated, and resolved on 8% sequencing gels as described
previously (13).
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RESULTS |
Previous results from our laboratory suggest that the AR N
terminus is necessary but not sufficient for androgen-specific gene
activation (10). To examine the intrinsic activities of the major
receptor domains, as well as interactions between domains, chimeric
receptors were constructed from mAR and rGR. Unique restriction sites
were introduced at regions of peptide sequence homology to rejoin the
cDNAs (see "Materials and Methods"). A NheI site placed within the first zinc finger and a BamHI site within
the nuclear localization signal divided the receptors into three
cassettes encompassing N terminus, DBD, and LBD (Fig.
1A). Receptors are named by
the origin of each domain, with A or G for AR or GR; thus the N
terminus of GR fused to the DBD and LBD of AR is the chimera GAA.

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Fig. 1.
Construction and expression of AR-GR chimeric
receptors. A, the N terminus, DBD, and LBD are depicted
for mAR and rGR. Positions of the introduced unique NheI
(n) and BamHI (b) sites are indicated.
B, wild type and mutant receptors were expressed in COS-7
cells for 44 h and detected by Western blotting of 20 µg of
whole cell extract. LNCaP and HTC cells express endogenous hAR and rGR,
respectively; the COS lane contains extract from untransfected cells.
Unmodified mAR and rGR are compared with parent receptors containing
the NheI and BamHI sites and modifications of the
5'-untranslated region (ARnb, GRnb). Antibodies directed against
N-terminal sequences detected receptors with the AR (left)
or the GR N terminus (right) (33, 34). C,
activation by chimeric receptors of the androgen-specific enhancer
C' 9 compared with multimerized simple response elements, 3xHRE-3,
was tested by transfection into CV-1 cells. Activity of the linked CAT
reporter is expressed as the percent conversion of chloramphenicol to
butyrated forms, with the values on C' 9 shown in black
bars and 3xHRE-3 in white bars; note different scales.
The S.E. of four independent assays is shown for C' 9. For 3xHRE-3,
the extract amount was adjusted to keep assays in the linear conversion
range, and values were normalized to AR; S.E. values were within 12%
of total activity. Diagrams below show C' 9, with the consensus
HRE-3, the half-site HRE-1, and a crucial nonreceptor binding site
(FPIV), in comparison to 3xHRE-3.
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AR, GR, and chimeric receptors were introduced into COS-7 cells, and
their expression was compared by Western blotting (Fig. 1B).
The receptors were all correct in size, but expression levels varied,
despite each having identical 5'-untranslated sequences. AGG
accumulated to low levels while GAA and GGA reached high steady states.
These disparate levels could result from differences in protein
stability or formation of inclusion bodies following overexpression in
COS cells (32, 37, 38). However, the functional level of these
receptors, as assayed by activation of simple HRE-tkCAT reporters (see
below), was more equivalent, and extremes of activity did not correlate
with protein expression levels detected by Western blot analysis (see
below).
The chimeric receptors were tested for induction of CAT activity from
the androgen-specific enhancer C' 9, in comparison to multimerized
consensus HREs (3xHRE-3), by transfection into CV-1 cells (Fig.
1C). Relative activity is shown rather than fold induction since activity of these reporters in the absence of hormone was negligible. AR activation of C' 9-tkCAT was 42% the activity of 3xHRE-3-tkCAT; in Fig. 1C, activation of the two reporters
is on different scales to allow direct comparison of specific
versus general function of each receptor. The chimeras
activated simple HREs at least as well as AR, with AGG and AGA having a
fewfold greater activity, except for GGA which was only one-fourth as active as AR. In sharp contrast, only AAG and GAG activated the specific enhancer C' 9 to levels approaching that of AR. These two
chimeras had in common the AR DBD, indicating a crucial role for this
domain. However, the AR DBD may be necessary but was not sufficient for
C' 9 induction since GAA was only somewhat more active than GR on the
specific enhancer. While not all receptors containing the AR DBD could
activate C' 9, receptors containing both the AR N terminus and DBD
could (AAG and AR itself). In fact, GAG activation of the
androgen-specific enhancer was unexpected, because DNA selectivity
alone is not known to distinguish AR and GR targets. This suggested
experiments below to test whether multiple and perhaps alternative
functions were involved in specific response.
We have previously shown that AR requires not only the consensus HRE-3
but also a nearby half-site, called HRE-1, to activate the
androgen-specific enhancer C' 9 (15). To contrast the mechanisms by
which AAG and GAG activated the specific enhancer, their use of the
weak HRE-1 was tested. Mutation of this site (C' 9-ls7) revealed
disparate sensitivities to HRE-1 (Fig.
2), whereas all receptors required HRE-3
for activation (not shown). Unlike AR, whose induction was reduced
5-fold in the absence of HRE-1, GAG was at least as active on the
mutant as on the wild type enhancer. AAG activity was decreased without
HRE-1, but not to the extent of AR. The dependence upon multiple
receptor binding sites suggested that activation by AR relied on
cooperativity between receptor dimers. That AAG was less affected than
AR suggested multiple domains might be involved in cooperative
interactions. To explore this further, AR C, which lacks most of the
LBD but is half as active as AR on C' 9, was tested and, in fact,
showed little sensitivity to the weak HRE (Fig. 2). This suggests that
the ability of AR to use HRE-1 is not intrinsic to the N terminus or
the DBD, but may involve interaction of the AR N and C termini. The
intermediate dependence of AAG on two HREs may stem from some
functionality provided by the partial homology of the GR LBD.

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Fig. 2.
Activation by AR depends upon multiple
HREs. AR, AAG, GAG, and AR C were tested for activation of
C' 9 mutated at the HRE-1 half-site (C' 9-ls7, depicted below the
histogram). Activity ±S.E. for each receptor is relative to activation
by that receptor of wild type C' 9.
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To test further the role of domain interactions and utilization of
multiple HREs, a mutant of C' 9 was used that supports activation by
GR. This variant enhancer has a linker scan disruption within HRE-3 and
a copy of the HRE-3 sequence inserted 10-bp distal to the enhancer (see
Fig. 3). GR can activate this reporter
(s10) about half as well as AR, which was ascribed to escaping
repressive effects of juxtaposed nonreceptor factors (13). Mutant
receptors that poorly activated C' 9 were tested for dependence on a
second HRE in derivatives of s10 in which HRE-1 had been inactivated (s10-ls7). AGA, like AR, showed greater induction when both HREs were
present (Fig. 3). In contrast, GR, GAG, and AR C were unaffected by
mutation of the weak element, while AAG (not shown) was intermediate in
sensitivity to AR and GR. The sensitivity by AGA to mutation of the
weak HRE was greater even than that of AR. This suggested that both AR
N and C termini are involved, via direct or indirect interaction, in
cooperative usage of multiple HREs. Further, AGA revealed that the AR
DBD is not requisite for activity per se in this context,
but may serve to evade repression on the specific enhancer that is
directed at the other steroid receptors via their DBDs.

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Fig. 3.
Utilization of HRE-1 is dependent on
interaction between the AR N terminus and LBD. AR, GR, AGA, GAG,
and AR C were tested on the s10 mutant of C' 9 that is activable
by GR due to displacement of HRE-3. The CAT activity ±S.E. is
normalized to AR activity on s10, with GAG and AR C on different
scales. 50 ng of receptor plasmid were used in transfections, except
for AR C which was at 100 ng. The CAT reporters are depicted below,
with targeted mutagenesis of either the consensus HRE-3 or the
half-site HRE-1 indicated by an X.
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Involvement of the AR N Terminus and LBD in Cooperative DNA
Binding--
Results thus far indicated that AR activation of the
specific enhancer relied on binding to both HRE-1 and -3. This was not solely a function of the DBD, suggesting that distinct domains of
receptor dimers at nearby sites might enhance cooperative DNA binding,
due to direct or indirect interactions. To obtain physical evidence of
this, baculovirus-expressed FL or N- or C-terminally deleted ( N,
C) rat ARs were used in DNase I protection assays. DNA binding was
first compared with a single element versus three tandem
copies of the consensus HRE (Fig. 4). FL
AR in 5 µg of Sf9 whole cell extract completely protected
3xHRE-3 from DNase I cleavage, but only protected a single HRE to
one-fifth that level. Full protection of single HREs was obtained with
20 µg of extract. This cooperativity extends observations of
footprints obtained with just the DBD on the probasin promoter (39) or with FL AR or N AR gel-shifts of HREs (36).

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Fig. 4.
Cooperative DNA binding by full-length AR and
AR deletion mutants on consensus HREs. Whole cell extracts from
Sf9 cells infected with baculovirus expressing full-length rAR
(AR FL), AR- N46-408 ( N), or
AR- C788-902 ( C) were used in DNase I
protection assays with the indicated extract protein amounts. DNA with
a single copy (1x) or multiple copies (3x) of the
consensus HRE-3 from the enhancer was used as a probe. The positions of
the HREs are indicated with arrows. The percent protection
of the HRE relative to digestion of naked DNA (0) is shown
near the lanes with lower extract concentrations, and was derived from
selected band intensities measured on a Molecular Diagnostics
PhosphoImager, normalized within the lane to a band unaffected by the
addition of extract.
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The source of the receptor domains in the chimeras altered the
functional dependence on weak HREs in transfection, which could reflect
altered affinity for these sites. The contribution to binding by the AR
N terminus and LBD were examined using baculovirus-expressed rAR
deletion mutants. N lacks residues 46-408 and behaves as a dominant
negative in transfection; C is truncated after residue 787 and has
no transactivation ability (24). N is produced at about the same
level as FL rAR in Sf9 cells, but C accumulates to only
5-10% of that level (36), as confirmed by Western blotting with an
antibody raised against a peptide near the DBD (data not shown). To
compensate, 5-10 times as much C-containing extract was used as for
the other receptors. N protected somewhat less efficiently overall
than FL rAR, but showed clear evidence of cooperative binding, in that
5 µg of extract protected three HREs to a much greater extent than
the monomer. This supports evidence from transfections with AR C
(Fig. 2 and 3) that the LBD contributes to cooperative interaction
between adjacent receptors. The capacity of C to protect single or
multiple HREs was less than that of FL rAR and N; increased extract
amounts protected 3xHRE-3 only somewhat more than 1xHRE-3, suggesting
little cooperativity.
Binding of FL rAR was examined on the specific enhancer C' 9 and on
derivatives in which HRE-1 or HRE-3 had been mutated (ls7 and ls9,
respectively) to determine whether cooperativity was evident for the
natural sequence (Fig. 5). At high
protein concentrations, either site could be independently protected to
a similar level of 85-95% protection as on the parental enhancer.
However, at lower extract concentrations (5 µg), the protection at a
single HRE was noticeably decreased by mutation of the other HRE
relative to the intact enhancer. This was particularly distinct for
binding to HRE-1 when HRE-3 was inactivated (ls9), but cooperation from the weak site was even evident for binding to HRE-3 (ls7). This cooperation was less dramatic than that demonstrated between multiple consensus elements in Fig. 4, perhaps due to additional weak receptor binding elsewhere on the enhancer or differences in geometry of the
sites. Nevertheless, even the weak HRE measurably increased AR binding
to the consensus site.

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Fig. 5.
Cooperativity conferred by binding to HRE-1
is diminished in the absence of the N- or C-terminal receptor
domains. A, whole cell extract containing full-length
rAR was used in DNase I protection on the androgen-specific enhancer
C' 9, as well as mutants altered in either the weak HRE-1
(ls7), or the strong HRE-3 (ls9). The
left lane shows the protection pattern of C' 9
without protein (0); positions of HRE-1 and -3 are
indicated. The middle panel shows the maximal protection
attained with 20 µg of extract. Lanes to the right include
percent protection attained for each site with 5 µg of extract when
the second site is mutated, in comparison to the center lane
with the wild type probe. B, protection of C' 9 by N
and C at high protein concentrations is shown in comparison to FL
AR, revealing poorer protection, especially of HRE-1 by the deleted
receptors by the percent protection for each site relative to naked DNA
to the right of the respective lane.
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The truncated receptors discriminated more than FL AR in binding to
HRE-1 and HRE-3 in C' 9, protecting less well overall and with poorer
affinity for HRE-1 (Fig. 5). With 20 µg of extract, there was
reasonable protection by N of the strong HRE-3, but relatively less
protection over HRE-1. This suggested that, while the LBD contributed
to cooperativity on multimerized consensus sites (Fig. 4), regions of
the N terminus might enhance stable binding to nonconsensus HREs. C
showed greater differential, protecting HRE-3 well, but HRE-1 only
modestly, again suggesting that recognition or association with the
weak HRE was impaired without an intact LBD. Thus domains outside of
the DBD may influence binding, particularly to nonconsensus HREs which
are requisite for AR activation of the specific enhancer.
AR N-terminal Subdomains Can Convert the GR N Terminus to an
Androgen-specific Activator--
The above experiments suggest that
activation of the androgen-specific enhancer by AR relied partly on
utilization of multiple HREs, accentuated by interactions involving the
AR N terminus and the LBD, and partly on a permissive effect of the AR
DBD. To confirm this, we sought to convert the chimeric receptor GAA to
an activator of C' 9, by adding regions of the AR N terminus that
might promote physical association with the C terminus but would not
add transactivation functions (17, 18, 20, 22, 40). We tested the first
37 amino acids of AR, fused to the translation start of GAA
(A37GAA), and AR sequences just upstream of the DBD, fusing
the GR N terminus through residue 391 to AR residue 392 (G391aAA). These mutants increased activation of C' 9 at
least 2-fold over activation by GAA, which was proportionally greater
than their increased activation of simple HREs (Fig.
6). These mutant receptors also showed
increased sensitivity to mutation of HRE-1 (not shown). A double mutant
with both the AR N-terminal addition and the region upstream of the DBD
did not show an additive increase in activation (not shown). This
modulation of GAA activity by AR N-terminal subdomains, including
increased sensitivity to HRE-1, is further evidence that the activation
of the specific enhancer, as well as general AR activity, is dependent
on interactions between N and C termini.

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Fig. 6.
Subdomains from the AR N terminus relieve the
N-terminal block of GR to transactivation. GAA and variants that
included subdomains from the AR N terminus were tested for activation
of the specific enhancer C' 9, using calcium phosphate to introduce
the DNAs into CV-1 cells. CAT activity is expressed relative to that of
AR, ± S.E. The receptors are depicted to the left, to
indicate N-terminal AR subdomains (black) added to that of
GR (white) in GAA. To the right is shown the
ratio of CAT attained for each receptor from the reporter driven by
C' 9 compared with driven by 3xHRE-3, relative to the AR value set to
1.0 (actual value was 0.88 in these experiments).
|
|
The AR N-terminal sequences that enhance specific activity of GAA could
be providing a positive function, or could be overcoming an inhibition
by other sequences, such as ascribed to the AR LBD in the absence of
the AR N terminus (24, 32). To address this, the AR LBD was truncated
at residue 634 in both AR and GAA. Both of these receptors activated
C' 9 to a greater extent than GR or GAA (GA634 is shown
in Fig. 6), implying that at least some inefficiency of GAA is due to
repression by the AR LBD, which can be relieved by sequences from the
AR N terminus.
 |
DISCUSSION |
In this study, we have discerned innate features of AR that are
involved in functional distinctions in activity from GR. For AR,
specific gene activation is problematic since its DNA sequence recognition overlaps with that of GR, which is more widely and abundantly expressed. Therefore androgen specific response mechanisms must emphasize AR activation while minimizing participation by GR. For
steroid receptors, like many other transcription factors, a major
determinant of specificity arises from interaction with additional DNA
binding proteins. For example, precise control by the
Drosophila homeoprotein ultrabithorax is attained by its interaction with extradenticle (41, 42). Both in vitro and in vivo, the androgen specificity of the Slp
enhancer relies on nonreceptor factors (15, 43). These cooperative
interactions may not only restrict DNA binding specificity, but may
also allow selective binding to natural sites that are of low affinity.
Cooperativity that refines specificity may occur between multimers of
the same protein, via domains not directly involved in DNA binding, as shown for STAT4 (44). Results obtained here reveal the importance of AR
cooperativity, with itself and with other factors, in accentuating the
AR/GR differential response.
The differential ability of AR-GR chimeric receptors to activate the
androgen-specific Slp enhancer C' 9 reveal that each of
the three major domains of the receptor plays a distinct role in
specificity. Further, the activity of each domain is modulated by the
presence of the others, implying complex interactions within receptor
dimers, and between them. Two receptor-intrinsic features in particular
enforce the AR specific response. First, the AR DBD evades a
context-dependent suppression that operates via the GR DBD.
Second, and of more general significance, the presence of both AR N and
C termini, whose interaction is well established (16-20), enhances
cooperative DNA binding. This allows AR to augment activation by
utilizing weak HREs that are ignored by GR.
The domain common to all receptors that activate the androgen-specific
enhancer (AR, AAG, GAG) is the AR DBD. This could reflect simply an
inability of GR to bind C' 9 sequences, or, alternatively, suppressive effects on the DBDs of non-androgen receptors in the C' 9
context. Whichever mechanism operates, it is strongly influenced by
nonreceptor factors, since this same enhancer is
glucocorticoid-responsive in T47D cells (13). GR binds both HRE-3 and
the HRE-1 weak site in DNase I footprinting assays, despite HRE-3
having low relative affinity for GR in competitive gel shift analysis
(13, 15). Nevertheless, receptors with the GR DBD activate HRE-3 well
in other contexts, such as when the site is moved 10 bp distal.
Therefore GR can bind HRE-3, but in C' 9, binding, or function once
bound, is dependent on adjacent sequences and the cohort of cellular factors. The effects of other sequences and factors is likely to
influence how the N terminus and LBD constrain the constitutive activity shown by the DBD alone, for both AR and GR (18, 38, 45).
After evading the context-dependent suppression operating
on other receptors via the DBD, AR activation is greatly enhanced by
cooperation from multiple response elements. The importance of the AR
N-C domain interaction in cooperativity is underscored by comparing the
behaviors of the chimeras GAG and AGA. GAG activates the specific
enhancer, having escaped suppression via the DBD, but does not require
the weak HRE, as demonstrated by its insensitivity to ls7 mutations. In
contrast, the chimera AGA, which functions when DBD repression is
abrogated on the s10 enhancer, gains greatly in activity when HRE-1 is
available. In fact, the extreme sensitivity of AGA to ls7 may indicate
that the AR DBD has a more direct influence on the transcriptional
response, rather than a simply permissive role, perhaps by affecting
efficacy of the N-C interaction.
A notable exception to the permissive effect of the AR DBD is shown by
GAA, whose inactivity on C' 9 demonstrates that the AR DBD is a
necessary, but insufficient, determinant of specificity. Importantly,
this receptor can be partially cured of its dysfunction by inclusion of
AR N-terminal sequences that allow association with the AR LBD (17), or
by removing the AR LBD entirely (Fig. 6). This implies that the AR LBD
restrains activity of the GR N terminus, in a manner similar to the
transdominant repression imposed by AR N against full-length AR (24).
This inhibitory effect occurs with the AR but not the GR LBD, since AAG
activates C' 9 efficiently. Along with the N terminus, the AR LBD
itself aids recognition of, or stabilizes binding to, weak HREs (Fig. 5). Thus when N-terminal AR sequences are added to GAA, in addition to
circumventing LBD repressive effects, they confer an enhanced ability
to utilize HRE-1.
The precise physical role of the N terminus and LBD in cooperative
receptor interactions is not yet clear. However, absence of either
domain lessens cooperative binding to multimerized consensus sites and
is particularly detrimental to binding to HRE-1 (Figs. 4 and 5). The
importance of the LBD is apparent in poor cooperativity of C even on
consensus elements. While N shows moderate cooperativity on
multimerized HREs, it binds HRE-1 poorly, like C. This suggests that
the N terminus aids use of weak HREs, at either the level of sequence
recognition or of binding stability. Communication between the N and C
termini during the process of DNA binding may occur via conformational
changes in the DNA-bound DBD, by direct contacts within the dimer, or
through contacts between dimers on adjacent HREs. In contrast to
intra-receptor interactions of ROR (46), the major transactivation
region of the AR N terminus does not appear to be involved in HRE
discrimination, however sensitive it might be to hormone occupation of
the LBD. It is appealing to consider that modes of communication
already well characterized within the AR dimer (17, 18, 20) may also exist between dimers.
Activation reliant on multiple and often nonconsensus HREs appears to
be a hallmark of androgen-dependent enhancers. Conforming to this mode are the prostate-specific probasin promoter, which like
the Slp enhancer retains androgen specificity in
vitro (11), and complex regulatory elements from genes for
prostate specific antigen (23), prostate C3 (47), and mouse aldose
reductase (48). In contrast, other androgen-dependent genes
manifest only single or less obvious HREs in regions required for
hormonal response (12, 49). As a consequence, nonreceptor factors are
crucial to regulation of these latter promoters. Even on promoters with multiple HREs, however, AR requires additional factors to generate a
specific response, both to increase intrinsic activation and to exclude
other receptors. Multiple weak binding sites are commonly exploited by
nuclear receptors (50-52), but AR in particular seems to rely on this
function. Our data suggests that the strong interaction between the N
terminus of AR and its LBD underlies this heightened cooperativity.
Coupled with the ability of the AR DBD to evade context-dependent suppression, these intrinsic features of
receptor work in concert with nonreceptor factors to refine the
differential between AR and GR response. In this manner, precise
specificity can be attained by conjoining several mechanisms, no one of
which by itself is stringently specific.
 |
ACKNOWLEDGEMENTS |
We thank Olli Janne for generously providing
baculovirus stocks of recombinant full-length and deleted rat ARs, Bill
Pratt for FIGR2 antibody, and Mike McPhaul and Marco Marcelli for
hAR C-ConAc. We thank Ron Koenig and Kate Tullis for helpful comments
on the manuscript.
 |
FOOTNOTES |
*
This work was supported by National Institutes of Health
Grant GM-31546 (to D. M. R.).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
To whom correspondence should be addressed. Tel.: 734-764-4563;
Fax: 734-763-3784; E-mail: drobins{at}umich.edu.
The abbreviations used are:
DBD, DNA binding
domain; LBD, ligand binding domain; HRE, hormone response element; AR, androgen receptor; GR, glucocorticoid receptor; mAR, mouse AR; rGR, rat
GR; PCR, polymerase chain reaction; CAT, chloramphenicol
acetyltransferase; tk, thymidine kinase; FL, full-length; bp, base
pair(s).
 |
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