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J Biol Chem, Vol. 273, Issue 38, 24874-24883, September 18, 1998
The Catalytic Subunit of the cAMP-dependent Protein
Kinase of Ovine Sperm Flagella Has a Unique Amino-terminal
Sequence*
Jovenal T. San
Agustin ,
John D.
Leszyk§,
Lydia M.
Nuwaysir¶, and
George B.
Witman
From the Department of Cell Biology and
§ Protein Chemistry Facility, University of Massachusetts
Medical Center, Worcester Foundation Campus, Shrewsbury, Massachusetts
01545 and ¶ Perkin Elmer Sciex, Applied Biosystems Division,
Foster City, California 94404
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ABSTRACT |
The basis for the unusual properties of the
catalytic subunit (C) of ram sperm cAMP-dependent protein
kinase was investigated. Ram sperm C was purified and found by mass
spectrometry (MS) to be ~890 Da smaller than C , the predominant
somatic isoform. Partial internal amino acid sequence from ram sperm C
was an exact match to that of bovine C , but differed from the
predicted sequences for the C and C isoforms. MS analysis of
2-nitro-5-thiocyanatobenzoic acid fragments showed that the mass
difference originated in the amino-terminal region. A unique blocked
amino-terminal fragment was isolated from sperm C and sequenced by a
combination of tandem mass spectrometry and Edman degradation of a
subfragment. The results revealed that the amino-terminal myristate and
the first 14 amino acids of C are replaced by an amino-terminal
acetate and six different amino acids in sperm C. The predicted mass
difference due to these changes is 899 Da. The region of homology
between sperm C and C begins at the exon 1/exon 2 boundary in C ,
suggesting that sperm C results from use of an alternate exon 1 in the
C gene. The different amino terminus of sperm C may be related to a
unique requirement for localization of the "free" C subunit within
the sperm flagellum.
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INTRODUCTION |
The cAMP-dependent protein kinase
(PKA)1 is a major enzyme in
cellular signal transduction and is thought to mediate most of the
physiological responses to cAMP in eukaryotic cells (1). Below a cAMP
threshold concentration, PKA exists as an inactive tetramer of two
catalytic and two regulatory subunits (CR2C). The two R
subunits form a dimer with each protomer attaching to the
substrate-binding site of a C subunit. Some isoforms of R also
associate with binding proteins collectively termed PKA anchoring proteins; it is believed that through these interactions PKA is targeted to specific subcellular compartments (for reviews, see Refs.
2-4). Activation of adenylate cyclase by extracellular signals raises
the intracellular concentration of cAMP, and at a certain threshold
concentration cAMP binds to the R subunits of the PKA tetramer,
releasing C to phosphorylate its substrates (for reviews, see Refs. 1
and 5-8).
Cyclic AMP-dependent signaling has an important role in the
control of sperm movement. Mammalian sperm are nonmotile in the testis,
but as they pass through the epididymis they acquire the capacity for
motility. This process is known as "epididymal maturation" and is
essential for the sperm to fertilize an egg (9). Several types of
studies have shown that changes in sperm cAMP levels are involved in
epididymal maturation (see Refs. 10-12 for reviews). The most direct
evidence for a role of cAMP in the acquisition of the capacity for
motility has come from studies of demembranated, reactivated sperm
(13-15). When caudal epididymal or ejaculated sperm were demembranated
by treatment with nonionic detergents, and then placed in an
appropriate solution containing ATP, they were reactivated with a
waveform very similar to that of intact ejaculated sperm. In contrast,
under the same conditions demembranated testicular sperm exhibited very
poor motility. However, if cAMP was added to the reactivation medium,
the demembranated testicular sperm began to beat with a motility
similar to that of the mature sperm models. Cyclic
AMP-dependent motility also could be demonstrated in the
demembranated ejaculated sperm if the sperm were metabolically inhibited to reduce their motility prior to demembranation (16, 17).
The requirement for cAMP could be bypassed by addition of exogenous C
to the reactivation solution, confirming that cAMP was acting via PKA
(17). Therefore, cAMP-dependent phosphorylation is critical
for sperm motility.
Sperm C (Cs) appears to have unusual solubility properties.
It is generally accepted that, in the presence of cAMP, C is soluble in
the cytoplasm (1, 18). However, in a previous study we observed that
neither detergent nor cAMP alone released C activity from demembranated
sperm, but that cAMP plus nonionic detergent did release the activity
(17). These results suggested that Cs is bound to internal
sperm structures by two types of bonds, one sensitive to detergent and
one sensitive to cAMP.
There are at least three different isoforms of mammalian C, C , C ,
and C , which are the products of different genes. C occurs in a
wide variety of tissues (19); C also is widely distributed but is
expressed in lesser amounts than C in most tissues except the brain
(19, 20). C appears to be expressed only in testis (21). C
appears to be the predominant isoform in mammalian germ cells (22).
Splice variants of both C and C also are known (23-25).
We now have further characterized Cs and investigated its
relationship to the previously known isoforms of C. We found that Cs is the major, and perhaps the only, PKA catalytic
subunit in sperm. We isolated Cs from ram sperm, which
could be obtained in amounts sufficient for protein biochemistry.
Purification also was aided by the solubility properties of the
subunit, which made it possible to obtain a homogeneous preparation of
Cs by a simple two-step protocol. Mass spectrometry (MS)
revealed that the mass of Cs was ~890 Da less than that
of C from ovine striated muscle. The amino terminus of Cs
was blocked, but partial amino acid sequence from internal tryptic and
CNBr fragments was an exact match to the sequence of bovine C .
Cs clearly differed in sequence from the C and C
isoforms. An amino-terminal endoproteinase lysine-C fragment was
isolated from Cs and sequenced by a combination of tandem
mass spectrometry (MS/MS) and Edman degradation of an endoproteinase aspartate-N subfragment. The results revealed that the amino-terminal 14 amino acids and amino-terminal myristate of C are replaced by six
different amino acids and an amino-terminal acetate in Cs.
The predicted mass difference due to this replacement is 899 Da, in
excellent agreement with the MS data. The region of homology between
Cs and C begins at exactly the exon 1/exon 2 boundary in
C , suggesting that Cs results from the use of an
alternate exon 1 in the C gene. The shorter amino terminus and lack
of a myristate moiety may expose a hydrophobic portion of the catalytic core of Cs, allowing Cs to bind to a
hydrophobic site within the flagellum and thus accounting for the
unusual solubility properties of the subunit.
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MATERIALS AND METHODS |
Materials used and their sources were: 4-aminobenzamidine, cAMP,
CNBr, 3,5-dimethoxy-4-hydroxycinnamic acid, and NTCB from Aldrich;
14C-methylated protein molecular weight markers were from
Amersham; Aquapore RP-300 C8 column (0.1 × 25 cm), Aquapore OD-300 C18 column (1 × 100 mm), and
C18 300 A column (0.5 × 150 mm) from Applied Biosystems; Tween 20 and SDS from Bio-Rad; endoproteinase aspartate-N from Boehringer Mannheim; bovine serum albumin (fatty acid free), hydrogenated Triton X-100, -octylglucoside from Calbiochem;
guanidine hydrochloride and urea from ICN; Immobilon P (PVDF) transfer
membranes, 0.45 µm, from Millipore; [ -32P]ATP from
NEN Life Science Products Inc; CM Fast Flow, Source 15S, from Pharmacia
LKB; endoproteinase lysine-C and modified trypsin from Promega;
nitrocellulose BA 83, 0.2 µm, from Schleicher and Schuell; alkaline
phosphatase-labeled goat anti-rabbit IgG (A3937), Amido Black, ammonium
bicarbonate, 5-bromo-4-chloro-3-indolyl phosphate/nitro blue
tetrazolium-buffered tablets, -cyano-4-hydroxycinnamic acid, DTT,
E-64, leupeptin, pepstatin, poly(Glu,Tyr) 4:1, PKA catalytic subunit
(bovine or porcine heart), PKI(5-24), Ponceau S, TLCK, and TPCK were
from Sigma; DE52 was from Whatman. All chemicals for automated Edman
degradation sequencing and peptide synthesis were from Applied
Biosystems/Perkin Elmer. Water and acetonitrile for HPLC separations
were from EM Science. Polyclonal antibody to bovine C was a gift from
Dr. Brian A. Hemmings (Friedrich Miescher-Institut, Switzerland).
Collection of Ovine Sperm
Ejaculated sperm were collected and washed as described earlier
(26). Epididymis and testis were obtained from a freshly killed ram.
Epididymal sperm was collected by retrograde extrusion of the
epididymal contents with wash buffer (27). The extruded sperm were then
washed as described for the ejaculated sperm. To collect testicular
sperm, a testis was minced, suspended in wash buffer, and the
suspension filtered twice through cheesecloth. The filtrate containing
testicular sperm was transferred to 15-ml polypropylene tubes and
centrifuged at 900 rpm for 20 min (Model CL Clinical Centrifuge, IEC).
The supernatant was removed and the sperm pellet was washed and
centrifuged again as above. The sperm concentrations were determined
using a hemacytometer.
Isolation of Ovine Sperm Flagella and Heads
The flagella were isolated using a modified version of an
earlier procedure (28). About 6 ml of ejaculated ram semen (sperm density 3-4 × 109/ml) were collected and washed. The
sperm density was adjusted to 1.5 × 109/ml with the
wash buffer to yield about 12 ml of sperm suspension. Three-ml aliquots
of the washed sperm were transferred to 50-ml polypropylene tubes, each
containing 9 ml of chilled phosphate-buffered saline with protease
inhibitors (150 mM NaCl, 10 mM
4-aminobenzamidine, 10 µM E-64, 4 mM EDTA, 15 µM pepstatin, 100 µM TLCK, 200 µM TPCK, 4 mM DTT, 20 mM
potassium phosphate, pH 6.5) (PBSI). Subsequent steps were done at
4 °C. The sperm suspension in each tube was sonicated on ice
(Branson Sonifier Model 200 fitted with a 3-mm double-stepped microtip)
using four 10-s continuous pulses with a power setting of 25% (37.5 watts). The above sonication conditions produced about 70% sperm
decapitation.
The flagella were separated from heads and residual whole sperm by
centrifugation at 4 °C in a discontinuous sucrose gradient as
described earlier (28) except that the bottom 2.2 M sucrose layer was omitted. The sonicated sperm (48 ml) were stirred into 108 ml
of 2.2 M sucrose and 13-ml aliquots were pipetted into 32-ml polycarbonate centrifuge tubes each containing 19 ml of 2.05 M sucrose. The tubes were centrifuged at 72,000 × g for 1.5 h (Beckman SW 28 rotor). Heads and whole
sperm pelleted at the bottom of the tube while the flagella collected
at the 1.5-2.05 M sucrose boundary.
The isolated flagella were transferred to 12-ml thick-walled
polypropylene tubes, diluted 1:2 with PBSI, and centrifuged at 18,000 × g for 15 min (Sorvall SS 34 rotor). The
pellets were resuspended in PBSI, and the concentration of the
flagellar suspension determined using a hemacytometer. Usually about
10 × 109 flagella were obtained from 6 ml of ram
semen.
Isolation of sperm heads was as described (28). Two passes through the
sucrose gradient were done to make sure that the preparation was free
of flagella and undecapitated sperm.
Preparation of Demembranated Ovine Ejaculated Sperm, Sperm Heads,
and Sperm Flagella
Ovine ejaculated sperm were demembranated as described earlier
(26). Isolated sperm heads and flagella were treated the same way
except that flagella were separated from the demembranation medium by
centrifugation through 40% Percoll, and heads were separated from the
demembranation medium by centrifugation through 70% Percoll.
Renaturation of Protein Kinases Blotted on PVDF Membrane
Samples were dissolved in SDS-PAGE sample buffer (10% glycerol,
3% SDS, 0.03% bromphenol blue, 50 mM DTT, 62.5 mM Tris-HCl, pH 6.8) and then electrophoresed in a 1.5-mm
thick gradient gel (5-15% acrylamide, 12 × 14 cm). Protein
kinases were renatured on the blot and detected using a protocol
adapted from Ferrell and Martin (29) and described earlier (30). In
some experiments, 1% poly(Glu,Tyr) 4:1, a tyrosine kinase substrate,
was used as blocking solution in place of 5% bovine serum albumin.
Western Blotting
Samples were dissolved in SDS-PAGE sample buffer,
electrophoresed in 0.75-mm thick 10% minigels (4.5 × 8 cm), and
blotted to PVDF membranes (TE 22 transfer apparatus, Hofer Scientific, 28 V for 5 min followed by 84 V for 20 min). The transfer buffer composition was 50 mM Tris base, 192 mM
glycine, 20% methanol, and 0.01% SDS. After transfer, the membrane
was blocked with TBS-Tween 20 (30 mM Tris-HCl, pH 7.4, 150 mM NaCl, 0.05% Tween 20) for 20 min, incubated with
anti-bovine C (in TBS-Tween 20, 1:200 dilution) for 1 h, then
washed four times (5 min each wash) with 200 ml of TBS-Tween 20. Incubation with the secondary antibody (alkaline phosphatase-labeled
goat anti-rabbit IgG in TBS-Tween 20, 1:800 dilution) was for 1 h,
followed by washing twice, 10 min each wash, with 200 ml of TBS-Tween
20. Final wash was 200 ml of 30 mM Tris-HCl, pH 7.4, 150 mM NaCl, 0.5% Triton X-100 for 20 min. The blot was then
exposed to 5-bromo-4-chloro-3-indolyl phosphate/nitro blue tetrazolium
(1 tablet dissolved in 10 ml water) to reveal cross-reacting
proteins.
Isolation of the PKA Catalytic Subunit (Cs) from
Ovine Sperm Flagella
Extraction of Cs from Sperm Flagella by
cAMP--
Extraction was done at 4 °C. Sperm flagella (in PBSI)
were centrifuged (1750 × g, 15 min) and resuspended
for 30 min in a Triton X-100/NaCl buffer (5 mM potassium
phosphate, pH 6.5, 0.5%, v/v, Triton X-100, 150 mM NaCl, 1 mM EDTA, 25 µM leupeptin, 1 mM
DTT), at a concentration of 3 × 108 flagella/ml. This
treatment removed the plasma membrane and most of the soluble flagellar
proteins that otherwise would coextract with Cs upon
subsequent treatment with cAMP; Cs itself remained bound to
the demembranated flagella.2
The suspension then was centrifuged (1750 × g, 30 min), the supernatant discarded, and the pellet dispersed in KPNELD
wash buffer (5 mM potassium phosphate, pH 6.5, 50 mM NaCl, 1 mM EDTA, 25 µM
leupeptin, 1 mM DTT, 0.22 ml of buffer/108
flagella) and centrifuged (1750 × g, 10 min). This was
repeated with 0.167 ml of buffer/108 flagella. The washed
pellet was then extracted for 20 min with KPNELD + 10 µM
cAMP, 0.167 ml/108 flagella. The cAMP extract, which
contained Cs, was transferred to a polypropylene tube that
had been treated with Triton X-100 to minimize nonspecific binding of
Cs, and then centrifuged at 27,000 × g for
15 min to remove residual flagella.
Fast Protein Liquid Chromatography of cAMP Extract of Sperm
Flagella--
The cAMP extract was made 0.2% (w/v) in
-octylglucoside and applied at 0.3 ml/min flow rate to a CM Fast
Flow column (0.5 × 5 cm) previously equilibrated with chilled
buffer A (20 mM potassium phosphate, pH 6.5, 1 mM EDTA, 50 mM NaCl, 0.1%, w/v,
-octylglucoside, 1 mM DTT). The column was washed with
buffer A until the absorbance, which rose due to cAMP in the extract,
returned to baseline. The column was eluted with 7 ml of a cold linear
NaCl gradient of buffer A plus buffer B (20 mM potassium
phosphate, pH 6.5, 1 mM EDTA, 300 mM NaCl,
0.1%, w/v, -octylglucoside, 1 mM DTT) at 0.2 ml/min
flow rate. Cs was detected in fractions between 180 and 215 mM NaCl. Yield was typically 20-25 µg/6 ml of semen.
-Octylglucoside was included in the buffers to prevent nonspecific
binding of Cs to the glass column, tubings, and tubes, as
well as to stabilize the native conformation of Cs
(31).
Isolation of the PKA Catalytic Subunit (Csm) from
Ovine Skeletal Muscle
The procedure was adapted from Okuno and Fujisawa (31) for the
isolation of bovine heart C. Working at 4 °C, about 600 to 800 g of skeletal muscle tissue from the hind legs and back of a ram were
stripped of fat and connective tissue and then passed through a meat
grinder (coarse setting). The ground tissue was mixed with 1.5 liters
of homogenization buffer (10 mM potassium phosphate, pH
6.8, 1 mM EDTA, 0.1 mM DTT) and further
processed to a smooth consistency in a Waring blender. The homogenized
mass was then centrifuged at 18,000 × g for 30 min and
the supernatant was collected, filtered through glass wool, and applied
to a packed DE52 column (5 × 15 cm) equilibrated with the
homogenization buffer. About 8 liters of wash buffer (55 mM
potassium phosphate, pH 6.8, 1 mM EDTA, 0.1 mM
DTT) were then passed through the column, followed by about 2 liters of
the DE52 equilibration buffer (45 mM potassium phosphate,
pH 6.8, 0.1 mM EDTA, 1 mM DTT, 0.1%, v/v,
Tween 20). The PKA holoenzyme was bound to the DE52 resin;
Csm was released by washing with DE52 equilibration buffer
containing 100 µM cAMP. DE52 sequestered cAMP, so that
Csm was eluted only after about twice the bed volume of the
elution buffer was applied. The fractions containing Csm
were identified by SDS-PAGE, and then applied to a CM Fast Flow column
(1 × 8.5 cm, equilibrated with DE52 equilibration buffer). The
column was washed with 20 mM potassium phosphate, pH 6.8, 1 mM EDTA, 50 mM NaCl, 0.1% (w/v)
-octylglucoside, 1 mM DTT and then subjected to a linear
salt gradient of 50 mM to 300 mM NaCl (total
volume of gradient, 50 ml; flow rate 0.4 ml/min). Csm
eluted between 160 and 280 mM NaCl. The resulting
Csm preparation was about 95% pure, with a yield of about
400 µg of Csm/600 g of skeletal muscle. It was made 40%
in glycerol and stored at 20 °C. Homogeneous Csm was
obtained by applying an aliquot of the glycerol-stabilized preparation
(2-3 ml, 40-60 µg of Csm) to a Source 15S column
(0.5 × 5 cm, equilibrated with buffer A) and eluting with a
linear NaCl gradient (buffer A plus buffer B, total volume of 7 ml,
flow rate 0.4 ml/min). Csm eluted as a sharp peak between
250 and 265 mM.
HPLC and Protein Sequencing
All HPLC separations were carried out on a modified
Hewlett-Packard HP1090 M system equipped with a UV
photodiode array detector with a 1.7-µl microflow cell. For 20 µl/min flow rates an LC packing Accurate Microflow splitter was used.
Automated Edman degradations were performed on an Applied
Biosystems/Perkin-Elmer 494 Procise sequencing system.
Mass Spectrometry
MALDI TOF MS was performed on a Perseptive Biosystems linear
Voyager BioSpectrometry Workstation. Electrospray MS/MS was performed using a Perkin-Elmer Sciex API 365 benchtop triple quadrupole mass
spectrometer equipped with MicroIonSpray and the
BioToolBoxTM software package. Product ion MS/MS
experiments were carried out using nitrogen as the dissociating gas at
a collision cell pressure of 2.2 × 10 3 torr and a
collision energy of 40 eV. Scans were obtained in the positive-ion mode
from m/z 30 to 1500 with a step size of 0.25 atomic mass
units and a dwell time of 0.75 ms. In order to increase sensitivity,
the first MS was operated using low resolution (full width,
half-height ~ 3 atomic mass units). Additionally, samples were
infused at a flow rate of 200 nl/min using the MicroIonSpray source,
thus allowing 140 scans to be signal averaged to improve signal-to-noise ratio.
Trypsin Digestion of Cs
Cs was blotted onto PVDF membrane as described above
(see "Western Blotting"). The membrane was cut into small pieces
(1 × 1 mm) and submerged under 50 µl of Digest Buffer (10%
acetonitrile, 1% hydrogenated Triton X-100, 100 mM
ammonium bicarbonate, pH 8.2). One µg of trypsin in 4 µl of 50 mM acetic acid was added to the sample, which was then
incubated overnight at 37 °C followed by direct injection of the
supernatant onto the HPLC. Tryptic peptides were separated on a
1-mm × 25-cm Applied Biosystems (Aquapore RP-300) C8
column using a linear gradient from 100% solvent A (0.1%
trifluoroacetic acid) to 55% solvent B (0.08% trifluoroacetic acid in
acetonitrile/water: 70/30) in 30 min, then from 55% solvent B to 85%
solvent B in 10 min at a flow rate of 150 µl/min. The eluent was
monitored at 210 nm and fractions were collected manually.
CNBr Cleavage of Csm and Cs at Methionyl
Residues
For electrophoretic analysis of fragments, about 2 µg each of
Csm and Cs in 50 µl of buffer A were
lyophilized. To each lyophilized sample was added 12.5 µl of 100 mM DTT, and the mixture then was allowed to stand at room
temperature for 1 h. To start the cleavage reaction, 37.5 µl of
47 mM CNBr (in 88% formic acid) were added. The reaction
mixture was incubated overnight (about 19 h) at room temperature
in the dark. To stop the reaction, 100 µl of water was added and the
resulting solution was lyophilized to remove the formic acid and
unreacted CNBr. The pellet was resuspended in 100 µl of water and
lyophilized again, and afterward 15 µl of SDS sample buffer (50 mM Tris-HCl, pH 6.8, 15% glycerol, 5% SDS, 0.003%
bromphenol blue) was added to the lyophilized sample. The sample was
electrophoresed in a 0.75-mm thick 13% Tris-Tricine/SDS-polyacrylamide gel (32); the gel was silver stained to reveal the fragments.
For sequencing of fragments, the starting sample contained about 10-15
µg of C. The cleavage products were separated by electrophoresis in a
1.5-mm gel and transferred to a PVDF membrane according to the protocol
of Otter et al. (33), except that the transfer time was
shortened from 17 to 12 h. The blot was stained with Amido Black
and the fragments excised and sequenced.
NTCB Cleavage of Csm and Cs at Cysteinyl
Residues
The procedure was adapted from Jacobson et al. (34).
The concentration of Csm and Cs (in fresh
buffer A) was adjusted to 40 µg/ml and 50 µl of each was then
lyophilized. The dried samples were redissolved in 125 µl of
denaturation buffer (100 mM HEPES, pH 8.5, 8.1 M urea) and allowed to stand for 30 min at room
temperature. A 15-µl aliquot of freshly prepared NTCB (66.5 mM) was added and allowed to react for 20 min. The amount
of NTCB added gave about a 10-fold excess of NTCB over the combined
sulfhydryl groups of DTT (present in buffer A) and Csm or
Cs (presumed to be two, as with bovine C ). NTCB (15 mg)
was first dissolved in 0.333 ml of ethanol and then made up to 1 ml
with the denaturation buffer. The pH of the reaction mixture after the
addition of NTCB was about 8.4. The cleavage reaction was initiated by
the addition of 4.8 µl of 1 N NaOH, which brought the pH
up to about 11.6. The reaction was allowed to proceed for about 16 h. The mixture was then transferred to a Centriplus 10 concentrator
(Amicon) and washed with buffer A until the urea and excess NTCB were
reduced about 3000-fold and the final volume was reduced to about 200 µl. The concentrate was then mixed with an equal volume of 2 × Schägger sample buffer and electrophoresed in a 10%
Tris-Tricine/SDS-polyacrylamide gel (32). The fragments were revealed
by silver staining.
Preparation of NTCB fragments for mass spectrometry was the same,
except that 30 µg each of Csm and Cs were
used as starting material. The Tris-Tricine gel was transferred to
nitrocellulose (33) at 28 V for 5 min and then at 84 V for 20 min. The
bands were revealed by staining with Ponceau S and then cut out for MALDI TOF MS.
Endoproteinase Lysine-C Digestion of Csm and
Cs
Csm and Cs were blotted on
nitrocellulose which was then cut into 1 × 1-mm pieces and
submerged under 50 µl of Digest Buffer. An aliquot of endoproteinase
lysine-C (0.5 µg in 0.5 µl of 25 mM sodium phosphate,
pH 7.5, 1 mM EDTA) was then added and the samples were
incubated overnight at 37 °C followed by direct injection of the
supernatant onto the HPLC. Endoproteinase lysine-C peptides were
separated on a 0.5 × 150-mm Applied Biosystems column
(C18, 300 A) using a linear gradient from 100% solvent A
to 46% solvent B in 35 min, then from 46% solvent B to 60% solvent B
in 10 min at a flow rate of 20 µl/min. The eluent was monitored at
210 nm and fractions collected manually.
Endoproteinase Aspartate-N Digestion of Blocked Amino-terminal
Peptide of Cs
The blocked amino-terminal peptide isolated from the
endoproteinase lysine-C digest of Cs was dissolved in 25 µl of 100 mM ammonium bicarbonate, and 0.12 µg of
endoproteinase aspartate-N in 3 µl of 10 mM Tris-HCl, pH
7.5, was added. Digestion proceeded overnight at 37 °C. The digested
peptide was desalted in a C18 microcartridge (0.8 mm × 5 mm, LC packing, San Francisco, CA) prior to direct application to
Edman sequence analysis.
Peptide Synthesis
Four peptides were synthesized in order to compare their MS/MS
product ion spectra to the MS/MS product ion spectrum of the amino-terminally blocked endoproteinase lysine-C peptide derived from
Cs: 1) acetyl-SANPNDVQEFLAK; 2) acetyl-ASNPNDVKEFLAK; 3) acetyl-ASGGPNDVKEFLAK; and 4) acetyl-ASNPGGDVKEFLAK. Peptides were
synthesized on a Perkin-Elmer 432A Synergy Peptide Synthesizer using
HBTU activation and the 9-fluorenylmethoxycarbonyl protecting strategy.
Crude peptide mixtures were purified by reversed phase HPLC using an
Aquapore OD-300 C18 column (1 × 100 mm) and a
water/acetonitrile/trifluoroacetic acid gradient at 40 µl/min and
37 °C.
 |
RESULTS |
Cs Has an Unusual Mobility in SDS-PAGE--
Our
previous results (17) showed that demembranated ram sperm models
retained >90% of the sperm PKA activity; moreover, preparations of
demembranated sperm with initially poor motility in the presence of ATP
became highly motile when cAMP was added, indicating that the
cAMP-dependent pathway that initiates motility was still
intact. To begin characterization of Cs and other protein kinases in these cytosol-free models, the models were analyzed using
protein kinase blots. Proteins of the demembranated sperm were
separated by SDS-PAGE, blotted to PVDF membranes, renatured by
incubation in a buffer containing the non-ionic detergent Tween 20, and
then incubated in the presence of [ -32P]ATP to allow
the bound kinases to phosphorylate themselves or the blocking reagent.
A typical autoradiogram of such a blot is shown in Fig.
1A. Six to eight putative
kinase bands were observed in the demembranated sperm. Two prominent
bands at ~Mr 40,000 and 39,000 migrated slightly
faster than porcine C (~Mr 41,000). To determine
if either of these was Cs, the incubation with
[ -32P]ATP was carried out in the presence of
PKI(5-24), a potent inhibitor of C (35), including ram Cs
(17) activity. The inhibitor completely and specifically blocked the
labeling of porcine C and the ~Mr 40,000 band
from sperm (Fig. 1B), indicating that the latter is likely
to represent Cs. Labeling of the other bands was not
affected by PKI(5-24). Interestingly, labeling of the prominent band
at ~Mr 69,000 was enhanced when the blocking
reagent was the tyrosine kinase substrate poly(Glu,Tyr) instead of
bovine serum albumin (results not shown), suggesting that this band
represents a tyrosine kinase. Tyrosine kinases also have been
implicated in the control of sperm motility (36, 37).

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Fig. 1.
Protein kinase blots of demembranated ram
sperm. Panel A, autoradiogram of blotted and renatured
protein kinases after labeling with [ -32P]ATP.
Lane S, demembranated ram sperm (3.3 × 106); lane C, porcine C (400 ng). Panel
B, same as panel A except labeling with
[ -32P]ATP was done in the presence of 600 nM of the PKA inhibitor PKI(5-24). Arrows
indicate PKI(5-24)-sensitive protein kinase bands.
Asterisks indicate a possible tyrosine kinase (see text).
Numbers indicate molecular weights of
14C-methylated marker proteins.
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To confirm that the sperm protein kinase inhibited by PKI(5-24) is the
catalytic subunit of PKA, the proteins of demembranated ram sperm were
probed in Western blots with a polyclonal antibody against bovine C
(Fig. 2A). The antibody
reacted with a single sperm protein that migrated slightly faster than
porcine C in the SDS-polyacrylamide gels. This protein could be
extracted from sperm flagella by treatment with cAMP in the presence of
Triton X-100 (Fig. 2A), in agreement with our previous
observation that much of the PKI(5-24)-inhibitable protein kinase
activity could be released from sperm by this same treatment (17).
These results provided independent evidence that the
~Mr 40,000 band from sperm is an isoform of
C.

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Fig. 2.
Immunodetection of Cs and
Csm by Western blot using polyclonal antibodies to bovine
C. Panel A, ram sperm (lane S, 1 × 106 washed sperm) contain a cross-reacting protein with a
slightly faster mobility than porcine C (lane C, 62 ng).
This protein is released from sperm flagella by extraction with Triton
X-100 in the presence of cAMP (lane Ex, extract from 2 × 106 flagella). Panel B, comparison of
electrophoretic mobilities of porcine C (lane C, 20 ng), ram
skeletal muscle C (lane Csm, 20 ng), ram sperm
head C (lane H, 3 × 106 heads), and ram
sperm flagellar C (lane F, 1 × 106
flagella). Lane F + Csm shows a mixture of ram
skeletal muscle C (20 ng) and ram sperm flagella (1 × 106 flagella). Panel C, the C subunits from ram
testicular, epididymal, and ejaculated sperm have identical
electrophoretic mobilities. Lane 1, porcine C (31 ng);
lanes 2 and 7, ejaculated ram sperm flagella
(6 × 105 flagella); lanes 3-5, ram sperm
from the cauda, corpus, and caput regions, respectively, of the
epididymis (1 × 106 sperm each); lane 6,
ram sperm from rete testis (1 × 106 sperm);
Numbers indicate molecular weight of marker proteins (not
shown).
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Cs Is a Tissue Variant--
The unusual mobility of
ram Cs could have been due to species (porcine
versus ovine) or tissue (somatic versus sperm)
variation. To clarify this, ram skeletal muscle C (Csm) was
partially purified and compared directly to the sperm isoform (Fig.
2B). Because the predominant isoform of C in skeletal muscle
is C (19), the isoform that we purified from muscle is presumed to
be predominantly or entirely C . The skeletal muscle subunit had the
same mobility as porcine C, and both migrated slightly slower than the
sperm subunit. When purified ram Csm and ram sperm flagella
were mixed together, two distinct, nonmerging bands were observed.
These results clearly indicated that the unusual mobility of
Cs is tissue specific.
Cs Is Contained Primarily in Flagella--
The
relative distribution of Cs in demembranated, isolated
sperm heads and tails also was investigated. The vast majority of
Cs was located in the flagella (Fig. 2B,
lanes H and F; note that lane H was
loaded with 3 × 106 sperm heads versus
1 × 106 flagella in lane F); however, some
Cs was detectable in the sperm heads. Similar results were
obtained with intact sperm heads and intact sperm tails (results not
shown). These results are consistent with previous reports that PKA is
located primarily in the sperm flagella (38-43).
The Unusual Mobility of Cs Is Not the Result of
Epididymal Processing--
Some sperm proteins undergo processing
during epididymal maturation (44-46). To determine if such processing
was responsible for the unusual mobility of Cs, sperm were
isolated from the testis and regions of the epididymis, and the
relative mobilities of their PKA catalytic subunits compared in Western
blots. Fig. 2C shows a Western blot of Cs from
demembranated ram testicular sperm, demembranated epididymal sperm
(cauda, corpus, and caput), and demembranated ejaculated sperm
flagella. The mobility of Cs was identical in sperm from
all stages, and in all cases was slightly faster than that of somatic
C. These results indicate that the apparently smaller size of
Cs is not due to processing during sperm maturation.
Purification of Cs--
To understand the difference
between Cs and Csm, it was necessary to purify
Cs for structural characterization. We previously reported
that demembranation of ram sperm with Triton X-100 (0.2%, 0.2 ml per
1.5 × 109 sperm, 35 s) did not release
significant PKI(5-24)-inhibitable protein kinase activity, and that
subsequent extraction of the demembranated sperm with cAMP (100 µM, 5 min) did not release the activity, but that
demembranation with Triton X-100 in the presence of cAMP solubilized
~50% of the activity (17). Unfortunately, the resulting extract also
contained a large number of other proteins that complicated
purification of Cs. More recently, we have found that
Cs can be removed from purified sperm flagella in a near homogeneous state by a two-step procedure consisting of longer extraction with Triton X-100 (0.5%, 5 ml per 1.5 × 109 sperm, 30 min) in the presence of 150 mM
NaCl to remove the detergent- and salt-soluble proteins, followed by
extraction with cAMP (10 µM, 20 min) in the absence of
detergent to remove Cs. Apparently, the longer extraction
with Triton X-100 disrupted bonds that impeded the release of
Cs under our previous extraction conditions. Inclusion of
150 mM NaCl in the Triton X-100 extraction caused release
at this step of some proteins that otherwise would be removed by the
cAMP buffer and thus contaminate the Cs. Fig.
3, TX-100, shows the flagellar
proteins released by the Triton X-100/NaCl extraction. After two washes
with buffer (washes), the flagella were exposed to 10 µM cAMP, which removed nearly pure Cs from
the flagella (cA ex). In some preparations, this cAMP
extract also contained small amounts of a 20-kDa protein (results not
shown). This apparently was not a proteolytic fragment of
Cs, as it was not recognized by polyclonal antibodies to
C (results not shown). Cs was further purified by
passing the cAMP extract through a CM Fast Flow column (Fig. 3, lanes
marked 10-21). This removed any trace of the 20-kDa protein, which eluted later than Cs. Using this procedure,
20-25 µg of purified Cs could be obtained from ~6 ml
of semen (~1010 sperm).

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Fig. 3.
Purification of
Cs. Silver-stained SDS-polyacrylamide gel
illustrating, from left to right, sequential
steps in Cs purification. Starting material was 8.2 × 109 ram sperm flagella. Lanes are as follows:
TX-100, proteins extracted by Triton X-100/NaCl (from
5.6 × 105 flagella); washes, supernatants
recovered from washes of the flagella after extraction with Triton
X-100/NaCl; cA ex, cAMP extract from washed flagella
(4.5 × 106); FT, flow-through during
introduction of cAMP extract to the CM Fast Flow column; 10, 12, 14, 15, 16, 17, 18, 19, 20, 21, fractions collected from the CM
Fast Flow column during elution with the NaCl gradient;
Csm, ram Csm (140 ng); M,
molecular weight markers. Fractions 12-20 were pooled to yield about
25 µg Cs.
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Cs and Csm Differ in Mass--
The
availability of pure Cs and Csm allowed us to
use MALDI TOF MS to determine if the difference in their
electrophoretic mobilities was due to their masses. The MALDI TOF mass
spectra for Cs had a single peak corresponding to a mass of
~39.9 kDa, whereas those for Csm had a single peak of
~40.8 kDa. Fig. 4 shows the spectrum
for an equimolar mixture of Cs and Csm; two
well separated peaks with masses of 39,832 and 40,722 Da were observed. Although some error is to be expected for the estimated masses of
proteins of this size, the mass difference obtained by comparing two
proteins in the same spectrum is quite accurate. Therefore, Cs is ~890 Da smaller than Csm, confirming
the apparent difference in mass observed by SDS-PAGE. The results also
confirm the purity of the Cs and Csm
preparations. The observed mass for ovine Csm was
reasonably close to that predicted for bovine somatic C with a
myristylated glycine at the amino terminus (40,858 Da) (see below).

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Fig. 4.
MALDI TOF mass spectrum of Cs and
Csm mixture. Equimolar amounts of ram Cs
and Csm were mixed together and analyzed. Two discrete
peaks were observed, differing in mass by 889.9 Da.
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Because Cs is smaller than Csm, the difference
in mass between the two subunits cannot be due to the addition of an
unusual post-translational modification to Cs. Somatic
C , which Csm is presumed to be, has been extensively
characterized. Its major post-translational modifications are
myristylation of the amino-terminal glycine (47), which adds 210 Da to
the mass predicted by sequence alone, and phosphorylation at Thr-197
and Ser-338 (48), each of which would add 80 Da to the predicted mass.
Therefore, even the total absence of these post-translational
modifications in Cs could not account for the difference in
mass. By the process of elimination, the difference must arise from
differences in the primary structures of the two proteins. It seemed
unlikely that this difference was due simply to proteolysis during
fractionation of the sperm or purification of Cs, because:
1) no band was ever observed in sperm that migrated with somatic C ,
and 2) attempts to obtain amino-terminal amino acid sequence from
Cs were unsuccessful, suggesting that its amino terminus
was blocked (see below).
The Partial Amino Acid Sequence of Cs Is Identical to
That of C --
Beebe et al. (21) reported the isolation
and sequencing of human cDNA clones encoding an unusual
tissue-specific isoform of C, which they termed C . C mRNA was
found in detectable levels only in testis. C has not yet been
isolated from testis, but when it was expressed and purified from
transfected cells it migrated in SDS-PAGE at 39-40 kDa
versus 41-42 kDa for C (49). Although C reportedly is
not sensitive to PKI, its expression in testis and the similarity in
its apparent mass to that of Cs raised the possibility that
Cs might be C . Human C and C differ at 74 amino
acid residues, suggesting that the ovine homologs of these two isoforms
should be distinguished readily by even partial amino acid sequences.
Attempts to obtain amino-terminal sequence directly from the intact ram
Cs were unsuccessful, suggesting that its amino terminus is
blocked. Consequently, purified Cs was digested with
trypsin to generate tryptic fragments, and the fragments purified by
HPLC. Similarly, purified ram Cs or Csm was
cleaved with CNBr, and the larger fragments separated by SDS-PAGE and transferred to PVDF membrane. Selected tryptic and CNBr fragments were
then sequenced by automated Edman degradation. Fig.
5 shows the resulting amino acid
sequences compared with similar sequences predicted for bovine C and
C , and human C and C . There is no published sequence for ovine
C or C . However, the ovine Cs sequence exactly
matched that of bovine C (78 out of 78 residues). Moreover, in 17 out of 18 positions where human C differed from human C , ovine
Cs was identical to human C . Therefore, Cs
is not C . Similarly, ovine Cs was identical to bovine
C at 5 out of 5 positions where bovine C differed from bovine
C , indicating that Cs is not C . These results
strongly suggested that Cs is a short variant of C .

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Fig. 5.
Partial sequence of Cs and
Csm from CNBr and tryptic fragments. Sequences
obtained for ram Cs and Csm fragments are
aligned with the corresponding fragments from bovine C and C , and
human C and C . Residues different from those of Cs
and Csm are highlighted.
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A single CNBr fragment of Csm was analyzed and found to
have a sequence identical to that of bovine C (Fig. 5). Although this sequence is inadequate to distinguish between C and C , the
results are consistent with our presumption that Csm is the conventional C isoform.
Localization of the Region of Mass Difference--
To delimit the
regions that are different between Cs and Csm,
the purified subunits were treated with NTCB, which cleaves at
cysteinyl residues. There are only 2 cysteinyl residues (Cys-199 and
Cys-343) out of a total of 350 amino acids in either bovine or human
C . The three fragments resulting from a complete cleavage of C by
NTCB are predicted to have masses of 0.9 kDa (residues 343-350), 16.6 kDa (residues 199-342), and 23.0 kDa (residues 1-198). When the NTCB
fragments of Cs and Csm were electrophoresed in
a Tris-Tricine/SDS-polyacrylamide gel, three major bands were seen
(Fig. 6A). The largest band
corresponded to the intact polypeptide. Based on the predicted sizes of
the fragments, fragment 1 must be the amino-terminal fragment, and
fragment 2 must correspond to residues 199-342. Fragment 2 from
Cs and fragment 2 from Csm had identical
mobilities, whereas fragment 1 of Cs migrated more rapidly
than fragment 1 of Csm. The fragments were then transferred to nitrocellulose and analyzed by MALDI TOF MS (Fig. 6B). Fragment 2 of
Cs and fragment 2 of Csm had nearly identical
masses of 17,970 and 17,967 Da, respectively. In contrast, fragment 1 of Cs had a mass of ~23,620 Da, whereas fragment 1 of
Csm had a mass of ~24,444 Da, a difference of ~824 Da.
Because this difference is similar to the difference in masses between
the intact polypeptides (~890 Da), most of the difference in mass
must be due to structural differences in the amino-terminal halves of
the proteins. Substantial sequence in this part of Cs
(residues 30-45, 72-91 and 129-133; see Fig. 5) already had been
found to match the sequence of C , so these regions could be ruled
out as being the source of the difference.

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Fig. 6.
NTCB fragments from Cs and
Csm. Panel A, Tris-Tricine gel of products
resulting from NTCB cleavage of ram Cs
(Cs) and Csm
(Csm). The three bands are intact C
(C) and fragments 1 (1) and 2 (2).
Starting material was 2 µg each of Cs and
Csm. Positions of molecular weight markers
(M) are indicated. Panel B, MALDI TOF
mass spectra of fragments 1 and 2 of Cs and
Csm. Singly, doubly, and triply charged ion peaks are
evident.
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Identification of a Unique Endoproteinase Lysine-C Fragment from
Cs--
There are 34 lysyl residues in bovine C , of
which 8 occur in the first 59 residues. It therefore seemed likely that
digestion of Cs and Csm with endoproteinase
lysine-C would allow the detection of any dissimilar fragments. Fig.
7A shows HPLC chromatograms of
endoproteinase lysine-C fragments from Cs and
Csm. A prominent peak eluting at 26 min was observed in the
Cs digest but not in the Csm digest. MALDI TOF
MS analysis of this peak indicated that it contained a single peptide
with a mass of 1474 Da (results not shown). Similarly, a peak at 1475 Da was observed in a MALDI TOF mass spectrum of the endoproteinase
lysine-C digest of Cs, but not in the Csm
digest (Fig. 7B). An attempt to determine the amino-terminal
sequence of the 1474-Da peptide obtained by HPLC was unsuccessful,
suggesting that its amino terminus was blocked. These results indicated
that this fragment probably represented the amino terminus of
Cs.

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Fig. 7.
Endoproteinase lysine-C fragments of
Cs and Csm. Panel A, HPLC
chromatograms of endoproteinase lysine-C digests of Cs and
Csm. The arrow indicates a unique peptide in the
Cs map. Panel B, MALDI TOF mass spectra of the
digests. The arrow indicates the unique 1,475 Da peptide in
the Cs digest.
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Amino Acid Sequence of a Unique Amino-terminal Fragment from
Cs--
The structure of the 1474-Da peptide was solved by
a combination of MS/MS on a triple quadrupole mass spectrometer and
Edman sequence analysis of an endoproteinase aspartate-N cleavage
product.
In product ion MS/MS, precursor ions (or parent ions) of a particular
m/z value are selected in the first quadrupole (Q1) of a
triple quadrupole mass spectrometer and allowed to enter the second
quadrupole (Q2). The second quadrupole acts as a collision cell and is
filled with a neutral gas (in this case nitrogen). The parent ions
undergo fragmentation through collisions with this neutral gas, a
process called collisionally activated dissociation, or CAD. These
product ions (or daughter ions) are then analyzed in the third
quadrupole (Q3). For peptide ions, fragmentation specifically at the
amide bonds results in a series of ions with charge retention on either
the carboxyl terminus ("y-ions") or amino terminus ("b-ions").
The sequence of the peptide can be deduced from these, as well as other
fragment ions in the daughter ion spectrum.
The doubly charged ion (m/z 738.3) was selected and
fragmented, producing the spectrum shown in Fig.
8B. Initial interpretation of
the spectrum confirmed an amino-terminal blocked residue (acetyl-AS) and provided much of the carboxyl-terminal sequence (DV(K/Q)EF(I/L)AK). Leucine and isoleucine have identical masses and lysine and glutamine have nearly identical masses and so could not be distinguished. Because
only a single aspartate was detected in the sequence, the 1474-Da
peptide was cleaved with endoproteinase aspartate-N, and the fragments
then sequenced by Edman degradation. As predicted, a single Edman
sequence (DVKEFLAK) was obtained. This indicated that the residue
following valine was lysine and confirmed the rest of the
carboxyl-terminal sequence. Determination of the amino-terminal sequence of the 1474-Da fragment was complicated because the data were
consistent with either glycine-glycine or asparagine on either side of
the proline; glycine-glycine and asparagine have identical masses. To
resolve this uncertainty, a series of synthetic peptides were made
containing permutations of asparagine and glycine-glycine. The tandem
mass spectrum of only one of these peptides, acetyl-ASNPNDVKEFLAK, was
virtually identical to that of the 1474-Da amino-terminal peptide
isolated from Cs (cf. Fig. 8, A and
B), indicating that this is the correct sequence.

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Fig. 8.
Analysis of a unique 1474-Da peptide by
tandem mass spectrometry. MS/MS product ion spectra for the doubly
charged ion with m/z 738.5 from the synthetic peptide
acetyl-ASNPNDVKEFLAK (Panel A), and the precursor-ion with
m/z 738.5 of the 1474-Da amino-terminally blocked peptide
derived from the endoproteinase lysine-C digest of Cs
(Panel B). The two spectra are in excellent agreement with
regard to fragment ions observed and their relative intensities. As
would be expected from a peptide with a carboxyl-terminal lysine, a
strong y-ion series is observed; doubly charged fragment ions are
prominent due to the internal lysine. Peaks due to cleavage at the
amino-terminal amide bond of the proline residue are particularly
prominent, as has been reported by others (59). Ions marked with an
asterisk (*) correspond to fragment ions
originating from a contaminant Triton X-100 precursor ion with a
nominal mass of 740 Da. Because Q1 was operated in a low resolution
mode, some ions with m/z 740 were admitted into the
collision cell for fragmentation. In a subsequent set of experiments
the resolution on Q1 was increased in order to prohibit the contaminant
Triton X-100 precursor ions from entering the collision cell. Peptide
MS/MS product ion spectra obtained under these conditions did not
contain the "*" fragment ions, whereas high resolution MS/MS
product ion scans for m/z 740 (i.e. prohibiting
fragmentation of m/z 738.5 peptide ions) did
produce the "*" contaminant ions.
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Although the 1474-Da peptide was derived from an endoproteinase
lysine-C digest, the appearance of an internal lysine in the fragment
is not completely unexpected because this lysine is followed by a
glutamic acid. Previous literature have suggested that this enzyme may
be hindered at glutamic acid residues (50).
A comparison of this sequence to the amino-terminal portion of bovine
C (Fig. 9) showed that residues 7-13
of Cs (VKEFLAK) are identical to residues 15-21 of C .
Residues 1-6 of Cs are completely different from residues
1-14 of C . The calculated mass difference between the
amino-terminal sequence of bovine C (including an amino-terminal
myristyl group) and that of Cs (including an amino-terminal
acetyl group) is 899.2 Da, in excellent agreement with the difference
in mass determined by MALDI TOF MS.

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Fig. 9.
Amino acid sequences of amino-terminal
regions of ovine Cs and bovine C . Residues 1-6 of
Cs and 1-14 of bovine C are highlighted. The
position of the exon 1/exon 2 boundary in mouse C is indicated by
brackets.
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DISCUSSION |
The PKA catalytic subunit of ram sperm (Cs) is unusual
in its solubility properties (17) and its electrophoretic mobility in
SDS-PAGE (see Figs. 1 and 2). The solubility properties were utilized
as a critical first step in a simple purification protocol that
permitted the isolation of ram sperm Cs in amounts
sufficient for characterization by peptide mapping, protein sequencing,
and mass spectrometry. The results showed that ovine Cs is
identical to bovine C in 85/85 amino acids sequenced between C
residues 15 and 317, but that the amino-terminal 14 amino acids of C
have been replaced with 6 amino acids of completely different sequence in Cs. Moreover, the amino terminus of Cs is
acetylated, rather than myristylated as in C . As a result,
Cs is predicted to be 899 Da smaller than C , in
excellent agreement with the mass difference (~890 Da) determined by
MS. This difference undoubtedly accounts for the more rapid mobility of
Cs in SDS-PAGE.
A closer inspection of the amino-terminal sequences of ovine
Cs and bovine C reveals that the homology between the
two subunits begins precisely at the site (Val-15 in C ) of the exon
1/exon 2 junction in the mouse gene (51) (Fig. 9). Inasmuch as the residues carboxyl-terminal to this site that have been sequenced in
Cs are an exact match to those of bovine C , it seems
likely that Cs is a splice variant of C resulting from
use of an alternative 5' exon. If Cs and C were
different genes, some differences in amino acid residues
carboxyl-terminal to the exon 1/exon 2 boundary probably would have
been detected in the tryptic and CNBr fragments that we sequenced.
Øyen et al. (22) reported that a probe specific for C
mRNA detected both 2.3- and 2.4-kilobase mRNAs in rat pachytene spermatocytes and round spermatids; the smaller band may have been
Cs mRNA.
The position of the first intron is conserved between mouse C and
C subunits (51), and two isoforms of bovine C have been
identified that similarly appear to use alternative versions of exon 1 (24). Different amino termini resulting from alternative promoter use
associated with two different 5' exons also have been reported for the
neuronal PKA catalytic subunit of Aplysia (52). It has been
suggested that the different amino termini may be important for
targeting specific isoforms of C to specific sites in the cell (Refs.
24 and 52, and see below).
A mouse C pseudogene, termed Cx, has been cloned (53). It does not
possess intron sequences and, based on Northern blot analysis and RNase
protection assays of testis and brain mRNA, is not expressed,
indicating that it is a retroposon. It was mapped to the mouse X
chromosome, whereas C , which it most closely resembles, maps to
chromosome 8. Compared with the C sequence, the Cx sequence contains
frameshift deletions that give rise to numerous termination codons in
the reading frame. The nucleotide sequence of Cx is homologous to that
of C downstream from the exon 1/exon 2 junction, but is completely
different upstream of this boundary. Cummings et al. (53)
reasoned that this apparent truncation at the splice site for the first
intron in C occurred because the mRNA intermediate for Cx was
incompletely spliced. However, the predicted amino-terminal sequence
for Cx is MPSSSNDV-, which is very similar to the amino-terminal sequence (M)ASNPNDV- of ovine Cs. Thus, it seems more
likely that the Cx pseudogene arose by reverse transcription of an
intact mouse Cs mRNA.
Beebe et al. (21) reported the cloning of cDNAs encoding
a unique testis-specific isoform of C, which they termed C . C has
not been isolated from testis, but when expressed in transformed adrenal cells, it migrated faster than C in SDS-PAGE (49). It also
differed from C in substrate specificity and sensitivity to
PKI(5-24). Comparison of the partial sequence of ovine Cs
with that predicted for human C showed that Cs is not
C . However, in our protein kinase blots, we detected a sperm protein
kinase migrating slightly faster than Cs that was not
inhibited by PKI(5-24). C cross-reacts weakly with an anti-bovine C
polyclonal antibody (49), and although we did not observe any
cross-reactivity with the faster, PKI-insensitive protein kinase band
using the same antibody, the possibility remains that this band
represents ovine C . If so, it may be possible to isolate C
directly from ram sperm and conduct studies of its structure and
properties.
In the course of cloning C from the human testis cDNA library,
Beebe and colleagues (21) also isolated C clones, but they did not
obtain a clone encoding the amino-terminal part of the molecule.
Apparently, this was because EcoRI was used to excise the
C cDNA inserts, and an internal EcoRI site was
present at the codons for Glu-17 and Phe-18 of the human C gene
(54). Because there was complete identity between their truncated
cDNA sequence and the sequence of a C cDNA from a HeLa cell
library (54), Beebe et al. (21) did not screen further for
the 5' end of the testis C cDNA. It is possible that
Cs is present in human testis, but went undetected because
all clones characterized were missing exon 1 and a portion of exon
2.
The substitution of the short acetylated amino-terminal segment in
Cs for the amino-terminal myristyl moiety and first 14 residues of somatic C is likely to have important consequences for
the structure of the subunit. In C , this segment, which corresponds to exon 1 and is termed the "myristylated motif," forms the first two turns of a long amphipathic helix, the A-helix, that extends across both the small and large lobes of the catalytic core (residues 42-297), then turns sharply inward to terminate with the myristyl group occupying a deep hydrophobic pocket (55). The myristate is
tightly anchored by interactions with hydrophobic groups from four
parts of the molecule that are widely separated in the linear sequence.
The myristate in turn anchors one end of the A-helix, which covers a
large and mostly hydrophobic portion of the catalytic core. Bacterially
expressed recombinant C lacking the myristyl group is more heat
labile than the myristylated subunit (56), and a deletion mutant
lacking the myristyl group and residues 1-14 also has decreased
thermal stability (57). These results indicate that the myristylated
motif is important for stabilizing the protein. Interestingly, deletion
of the myristylated motif did not affect the catalytic properties of
the recombinant C . Therefore, Cs might be expected to be
less thermodynamically stable than C , but to be similar with regard
to catalytic activity. In crystals of the non-myristylated recombinant
C , the amino-terminal 14 residues were not visible, indicating that
they are unstructured in the absence of the myristyl group (58). It
would be of interest to determine if the short amino-terminal domain of
Cs is similarly unstructured.
In C the amino acid residues of the myristylation motif and the rest
of the A-helix shield the myristate and hydrophobic surface of the
catalytic core from the aqueous environment, with the result that free
C is soluble. It is possible that replacement of the myristylation
motif with a shorter stretch of residues, coupled with replacement of
the myristate with an acetate, would leave a portion of the hydrophobic
core exposed in Cs. Additionally, because the shorter
A-helix would be more loosely held to the hydrophobic core as a
consequence of the absence of the myristyl anchor, even more of the
hydrophobic surface beneath it might be exposed. In this case, the
surface of Cs would have a hydrophobic patch that might
cause it to bind to other hydrophobic surfaces in the flagellum.
Indeed, such a hydrophobic site may exist on Cs. In the
course of developing our purification protocol for Cs, we
observed that Cs eluted from a Source 15S column as a broad
peak (results not shown). This was in contrast to Csm,
which eluted as a sharp peak. Source 15S is an anion exchanger with a
polystyrene/divinylbenzene matrix. Two possible explanations for the
different elution profiles are that either the Cs sample
was heterogeneous, or there was a substantial nonspecific interaction
of the matrix with Cs but not with Csm. The
former is unlikely, because only one band was observed in
silver-stained SDS-PAGE and only one peak was detected in mass spectra
of purified Cs. The broad peak observed with Cs was more likely due to hydrophobic interaction with the column matrix.
The corollary of this is that Cs has an exposed hydrophobic domain not present in Csm (C ).
The presence of a hydrophobic patch on Cs could explain why
cAMP alone could not release Cs from demembranated sperm
(17), but Cs was released from sperm in the presence of
cAMP plus Triton X-100 (17) or by cAMP following extended extraction
with Triton X-100 (this report). The Triton X-100 may disrupt
hydrophobic interactions between Cs and a flagellar protein
other than R. Consistent with this, when unmyristylated recombinant
C was co-crystallized with a detergent, the hydrophobic pocket was
found to be occupied by a molecule of the detergent (55). This raises
the possibility that the unusual amino terminus of Cs may
be related to a unique requirement for localization of the "free"
subunit to a specific compartment within the highly ordered sperm
tail.
Many proteins are potential substrates for phosphorylation by C. In the
sperm, phosphorylation of specific proteins by C may be achieved by
controlling access of C to its potential substrates. For example, if C
were tethered to a flagellar structure by its unique amino terminus or
a hydrophobic patch, it would be unable to diffuse freely upon
cAMP-induced release from R, and could phosphorylate only those
substrates within its immediate vicinity. Such anchoring would prevent
promiscuous phosphorylation of incorrect substrates, with its
potentially deleterious effects on flagellar motility. Alternatively,
anchoring of Cs may keep the "free" subunit from
sterically interfering with the motile machinery of the axoneme.
 |
ACKNOWLEDGEMENTS |
J. T. S. A. and G. B. W. thank Dr. John A. McCracken and Christine Raffin-Cammuso for
expert advise and assistance in the collection and preparation of ram
sperm and in the upkeep of rams. L. M. N. acknowledges
Phillip Banda and Ken Otteson for the preparation of synthetic
peptides.
 |
FOOTNOTES |
*
This study was supported by National Institutes of Health
Grant HD23858, National Science Foundation Grant 9512226, and a grant
from the Campbell and Hall Charity Fund.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
The abbreviations used are:
PKA, cAMP-dependent protein kinase; C, catalytic subunit of PKA; R, regulatory subunit of PKA; PKI, heat stable inhibitor of PKA; CNBr, cyanogen bromide; NTCB, 2-nitro-5-thiocyanatobenzoic acid; PAGE, polyacrylamide gel electrophoresis; PVDF, polyvinylidine difluoride; DTT, dithiothreitol; E-64, trans-epoxysuccinyl-L-leucylamido-(4-guanidino)butaneTLCK, N -p-tosyl-L-lysine
chloromethyl ketoneTPCK, N-tosyl-L-phenylalanine chloromethyl ketoneMALDI TOF MS, matrix-assisted laser desorption/ionization
time-of-flight mass spectrometryHBTU, o-benzotriazol-1-yl-N,N,N',N'-tetramethyluronium
hexafluorophosphateTricine, N-[2-hydroxy-1,1-bis(hydroxymethyl)ethyl] glycineHPLC, high performance liquid chromatography.
2
J. T. San Agustin and G. B. Witman,
unpublished results.
 |
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