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J Biol Chem, Vol. 273, Issue 51, 34206-34213, December 18, 1998
Heterologous Expression of the Rhodobacter capsulatus
BchI, -D, and -H Genes That Encode
Magnesium Chelatase Subunits and Characterization of the
Reconstituted Enzyme*
Robert D.
Willows and
Samuel I.
Beale§
From the Division of Biology and Medicine, Brown University,
Providence, Rhode Island 02912
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ABSTRACT |
Magnesium chelatase inserts
Mg2+ into protoporphyrin IX in the chlorophyll and
bacteriochlorophyll biosynthetic pathways. In photosynthetic bacteria,
the products of three genes, bchI, bchD, and
bchH, are required for magnesium chelatase activity. These genes from Rhodobacter capsulatus were cloned separately
into expression plasmids pET3a and pET15b. The pET15b constructs
produced NH2-terminally His6-tagged proteins.
All proteins were highly expressed and were purified to near
homogeneity. The BchI and BchH proteins were soluble. BchD proteins
were insoluble, inactive inclusion bodies that were renatured by rapid
dilution from 6 M urea. The presence of BchI in the
solution into which the urea solution of BchD was diluted increased the
yield of active BchD. A molar ratio of 1 BchI:1 BchD was sufficient for
maximum renaturation of BchD. All of the proteins were active in the
magnesium chelatase assay except His-tagged BchI, which was inactive
and inhibited in incubations containing non-His-tagged BchI. Expressed
BchH proteins contained tightly bound protoporphyrin IX, and they were susceptible to inactivation by light. Maximum magnesium chelatase activity per mol of BchD occurred at a stoichiometry of 4 BchI:1 BchD.
The optimum reaction pH was 8.0. The reaction exhibited Michaelis-Menten kinetics with respect to protoporphyrin IX and BchH.
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INTRODUCTION |
Magnesium chelatase inserts Mg2+ into
protoporphyrin IX in the chlorophyll and bacteriochlorophyll
biosynthetic pathways. This enzyme is at the branch point of the
(bacterio)chlorophyll and heme biosynthetic pathways and is believed to
have a regulatory role in directing biosynthetic intermediates into the
(bacterio)chlorophyll pathway (1). Transposon mutagenesis studies in
Rhodobacter capsulatus (2) and Rhodobacter
sphaeroides (3) have shown that the products of three genes,
bchI, bchD, and bchH, are required for
this insertion. Genes that are homologous to bchI,
bchD, and bchH have been reported in plants and
photosynthetic bacteria. It has been suggested that the genes be named
bchI, bchD, and bchH when referring to
organisms that accumulate bacteriochlorophyll and chlI,
chlD, and chlH for the respective homologous
genes in organisms that accumulate chlorophyll (1). This nomenclature will be used here.
Expression of the three R. sphaeroides genes in
Escherichia coli showed that all three gene products, plus
ATP, Mg2+, and protoporphyrin IX, were required for
magnesium chelatase activity (4, 5). An enzyme activation step
involving the BchI and BchD subunits was observed (5) that was similar
to that reported for the pea magnesium chelatase (6). However, very low
expression of the BchD protein limited further characterization of
magnesium chelatase (5). Heterologous expression of individual subunits
and reconstitution of magnesium chelatase activity has recently been
described for tobacco (7), the cyanobacterium Synechocystis
sp. PCC 6803 (8), and the green bacterium Chlorobium vibrioforme (9) However, characterization of the reaction using recombinant proteins has been limited due to low levels of expression and poor recovery of activity from these systems.
We now report the cloning and high level expression of the magnesium
chelatase genes from R. capsulatus, the purification of the
gene products, and characterization of the reconstituted enzyme.
Portions of this work were previously published in abstract form
(10).
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EXPERIMENTAL PROCEDURES |
Construction of Plasmids for Expression of bchI, bchD, and
bchH--
The plasmid pRPS404 (11), which contains a 44-kilobase pair
region of the R. capsulatus photosynthetic gene cluster, was used as a PCR1 template
throughout. A modified T-vector was constructed between the
EcoRI and BamHI sites of pBluescript (KS)
(Stratagene, La Jolla, CA) essentially as described in Ref. 12, and
this vector was used to subclone the bchID and
bchD genes as described below. The oligonucleotides
5'-GGATCATCTTGCGGAAACTGT-3' and
5'-ATGACTACCGCCGTCGCTCGACTTCAACCCTCTGCT-3' were used to amplify the
bchID region of the photosynthetic gene cluster by PCR using
Taq DNA polymerase (Stratagene). The 3-kilobase pair PCR
product was then cloned directly into the T-vector, yielding plasmid
pKSBchID. This cloning created an NdeI restriction site at
the bchI translation start site. A region containing the
bchI gene and the 5' portion of bchD was then
subcloned between the NdeI and BamHI sites of
either pET3a (Novagen, Madison, WI) to create pBchI or pET15b (Novagen)
to create pHisBchI. The oligonucleotides 5'-ATGGACCACGAACGCCTGAAGTCGGCCCTTG-3' and
5'-ACCCTGCGTCGCGCCGCCGCCGACCGATAGG-3' were used to amplify the
bchD gene by PCR using Pfu DNA polymerase (Stratagene). The 1.8-kilobase pair PCR product was cloned into the
modified T-vector, yielding plasmid pKSBchD. This cloning created an
NdeI restriction site at the bchD translation
start site. This plasmid was digested with NdeI and
XhoI, and the bchD fragment was subcloned between
either the NdeI and BamHI sites of pET3a to
create pBchD, or the NdeI and XhoI sites of
pET15b to create pHisBchD. The oligonucleotides
5'-AGGCCCCATATGCACGATGAGTCGATGAGC-3' and
5'-CCCTCCTTTTCGTAGTCGTAGATCTCATTC-3' were used to amplify bchH by PCR using Pfu DNA polymerase. These
oligonucleotides introduced NdeI and BglII
restriction sites. The PCR product was then either digested and cloned
directly into pET3a to create pBchH or into the pCRBlunt (Invitrogen,
Carlsbad, CA) vector to create pCRBchH and then subcloned into pET15b
to create pHisBchH.
The magnesium chelatase genes in these plasmids were sequenced to check
for errors using a Dye-Deoxy terminator kit (PE Applied Biosystems,
Foster City, CA) with the Applied Biosystems model 377 sequencer. The
first subclone of bchI, which was used to make the
expression clones, was sequenced completely, and the final bchI expression clones were sequenced in from the 5'-end to
verify that they were in frame. The first bchD and
bchH subclones were sequenced 600 base pairs in from each
end, and the final bchD and bchH expression
clones were sequenced in from the 5'-end to verify that they were in
frame. No errors were detected.
Expression of BchI, BchD, and BchH in E. coli--
E.
coli BL21 (DE3) pLysS (Novagen) strains containing the expression
plasmids were grown at 25 or 37 °C in 1 liter of LB medium (13)
containing 100 µg/ml ampicillin and 34 µg/ml chloramphenicol until
the A600 of the cultures was 0.8. Protein
expression was induced by the addition of isopropyl
-D-thiogalactopyranoside to a final concentration of 1 mM. After 4 h, the cells were harvested by
centrifugation. For the expressed pET3a constructs, the cells from 1 liter of culture were resuspended in 20 ml of 50 mM
Tricine-NaOH, pH 8.0, 15 mM MgCl2, and 4 mM DTT. The suspension was then frozen at -20 °C,
thawed once, and then lysed completely by passage through a French
pressure cell (SLM, Urbana, IL) at 20,000 p.s.i. For expression from
pET15b constructs, the cells from 1 liter of culture were resuspended
in 20 ml of 20 mM Tris-HCl, pH 7.9, 0.5 M NaCl, 15 mM MgCl2, and 5 mM imidazole.
This suspension was frozen at -20 °C, thawed once, and then lysed
by passage through a French pressure cell at 20,000 p.s.i.
Purification of the Expressed Proteins--
The BchH
protein was purified essentially as described previously for the
protein from R. sphaeroides (5).
The BchD protein was expressed as inclusion bodies, and these were
purified as described in the pET system manual (Novagen). The inclusion
bodies were then solubilized in 6 M urea, 50 mM Tricine-NaOH, pH 8.0, 15 mM MgCl2, and 4 mM DTT. The solubilized protein was loaded onto a RESOURCE
Q (Amersham Pharmacia Biotech) cation exchange chromatography column
that was pre-equilibrated in the same buffer, and then the protein was
eluted with this buffer containing a linear gradient of 0-1
M NaCl, in 10 column volumes. The BchD protein eluted at
0.4 M NaCl.
The BchI expression lysate was centrifuged at 30,000 × g for 30 min, and then polyethylene glycol-8000 (molecular
weight, 8000) was added to the soluble supernatant to a concentration of 10% (w/v). The mixture was placed on ice for 30 min and then centrifuged for 30 min at 10,000 × g, the pellet was
discarded, and polyethylene glycol-8000 was added to a final
concentration of 25% (w/v). After standing for 2 h on ice, the
solution was centrifuged at 30,000 × g for 30 min. The
supernatant was discarded, and the precipitate was washed once with
30% (w/v) polyethylene glycol-8000 and then redissolved in 50 mM Tricine-NaOH, pH 8.0, 15 mM
MgCl2, and 4 mM DTT. The BchI protein was then
purified by cation exchange chromatography as described above for BchD but without urea in the buffers. BchI eluted at 0.3 M NaCl.
The HisBchH and HisBchI proteins were purified on a
Ni2+-chelating column as described in the pET system
manual, except that the eluted proteins were immediately desalted by
Sephadex G-25 (Amersham Pharmacia Biotech) chromatography into 6%
glycerol, 50 mM Tricine-NaOH, pH 8.0, 15 mM
MgCl2, and 4 mM DTT.
The HisBchD protein was expressed as inclusion bodies, and these were
purified as described in the pET system manual (Novagen). The
solubilized protein was then further purified on a
Ni2+-chelating column under denaturing conditions in 6 M urea as described in the pET system manual. After the
protein was eluted, the buffer was changed to 6 M urea, 50 mM Tricine-NaOH, pH 8.0, 15 mM
MgCl2, and 4 mM DTT.
Assay for Magnesium Chelatase--
The assay mixture contained,
in 50-1000 µl, the following: 50 mM Tricine-NaOH, pH
8.0, 15 mM MgCl2, 4 mM DTT, 4 mM ATP, 20 mM phosphocreatine, 20 units/ml of
rabbit muscle creatine phosphokinase, 4 µM protoporphyrin
IX, and various amounts of recombinant proteins as described in the
figure and table legends. The assay mixtures were incubated for 30 or
60 min at 30 °C and stopped by the addition of 9 ml of
acetone:H2O:32% (w/v) NH3 (80:20:1, v/v/v) per
ml of incubation mixture and analyzed by fluorescence spectroscopy with the excitation wavelength set at 418 nm and the emission wavelength set
at 596 nm. The intensity of the emission at 596 nm of standard magnesium-protoporphyrin IX in the same solution was proportional to
the concentration within the range of 1 nM to 1 µM. A standard curve was used to determine the amount of
magnesium-protoporphyrin IX formed in the assay.
Antiserum to BchD and Immunoblotting--
Antiserum to HisBchD
was raised in a New Zealand White rabbit using standard procedures
(14). The antiserum was cross-absorbed onto an E. coli
lysate column (Pierce) according to the manufacturer's instructions.
Immunoblots were made using standard methods (14) with a 1/5000
dilution of antiserum and detection by a horseradish peroxidase-conjugated secondary antibody and a chemiluminescent substrate.
Other Methods--
SDS-polyacrylamide gel electrophoresis was
done according to the procedure of Fling and Gregerson (15) and gels
were stained with colloidal Coomassie Brilliant Blue (16). R. capsulatus strains ZY6 and DB350 (2, 17) were a gift from C. E. Bauer and D. Bollivar. They were grown in RCV+ medium in the dark at 25 °C as described by Bollivar et al. (2).
Chemicals--
Protoporphyrin IX and magnesium-protoporphyrin IX
were purchased from Porphyrin Products, Inc. (Logan, UT). Except where
indicated otherwise, all other chemicals were from Fisher, Sigma, or
Research Organics (Cleveland, OH).
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RESULTS |
Purification of Expressed Subunits--
The individual magnesium
chelatase recombinant subunits were purified as described under
"Experimental Procedures." With the exception of non-His-tagged
BchH, they were homogeneous as judged by SDS-polyacrylamide gel
electrophoresis (Fig. 1).

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Fig. 1.
SDS-polyacrylamide gel electrophoresis of the
purified proteins. Lane 1, 4 µg of BchI; lane
2, 0.5 µg of HisBchI; lane 3, 2 µg of BchD;
lane 4, 4 µg of HisBchD; lane 5, 4 µg of
BchH; lane 6, 4 µg of HisBchH. Migration positions of
standard proteins with the indicated molecular masses (in kDa) are
shown at the left of the image.
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BchH and HisBchH were expressed in soluble form with protoporphyrin IX
noncovalently bound, as was found for the R. sphaeroides BchH protein expressed in E. coli (5). The absorption peaks attributed to protoporphyrin IX are visible in the absorption spectrum
of purified HisBchH (Fig. 2A).
The fluorescence excitation spectrum (Fig. 2B) shows a
pronounced peak at 280 nm that is not present in the spectrum of free
protoporphyrin IX, indicating that one or more protein tryptophan
residues are in close proximity to the protoporphyrin IX and can
transfer excitation energy to the pigment. The bound protoporphyrin IX
caused BchH to become very susceptible to inactivation by light. Under
normal laboratory lighting, it was inactivated in 10 min at 0 °C
(data not shown). To prevent this light inactivation, all of the BchH
expression and purification steps were performed in the dark or under a
dim green safelight. In addition, all magnesium chelatase assays were done in the dark.

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Fig. 2.
Spectra of HisBchH protein.
A, absorption spectrum of 166 µg of HisBchH in 1 ml of 50 mM Tricine-NaOH, pH 8.0, 15 mM
MgCl2, and 1 mM DTT. B, dashed
line is the fully corrected fluorescence excitation spectrum of 66 µg of HisBchH in 1 ml (1 µM) of 50 mM
Tricine-NaOH, pH 8.0, 15 mM MgCl2, and 1 mM DTT; solid line is the fluorescence
excitation spectrum of 0.5 µM standard protoporphyrin IX.
Emission was monitored at 635 nm.
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BchD and HisBchD were both expressed as inclusion bodies. As described
below, these proteins, after solubilization with urea, reconstituted
magnesium chelatase when added to assay buffer containing BchH and BchI.
Reconstitution of Magnesium Chelatase Activity--
In
vitro magnesium chelatase activity was reconstituted only upon the
addition of all three expressed proteins, BchI, BchH (or HisBchH), and
BchD (or HisBchD) to the incubation mixture (Fig.
3). Some product was formed in
incubations without added protoporphyrin IX, because the protoporphyrin
IX that is bound to purified BchH can be used as substrate.

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Fig. 3.
Emission spectra of reaction product.
Acetone extracts were obtained from 100 µl of magnesium chelatase
assays incubated for 30 min at 30 °C as described under
"Experimental Procedures." Amounts of protein in the assays as
indicated were 10.4 µg of BchD, 22 µg of BchI, and 66 µg of
HisBchH, with the exception of the first assay, which contained a
mixture of renatured BchD (8.7 µg) and BchI (19.6 µg).
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Although both BchI and HisBchI were highly expressed in soluble form,
only non-His-tagged BchI was active in the magnesium chelatase assay.
HisBchI was inactive, and it inhibited the reaction in incubations
containing BchI (Fig. 4).

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Fig. 4.
Inhibition of magnesium chelatase by
HisBchI. Assays (100 µl) contained 5 µg of BchI, 20 µg of
BchH, approximately 4 µg of BchD, and the indicated amounts of
HisBchI. Incubation was for 60 min at 30 °C. The line is
the best fit linear extrapolation for the data points.
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For reconstitution of activity, BchD (or HisBchD), solubilized in 6 M urea, was added directly to the assay mixture containing the other two protein components. BchD, therefore, refolded to an
active form in the reaction mixture during the incubation, as was
recently reported for C. vibrioforme BchD (9). Although this
method of assaying magnesium chelatase was useful for reconstitution experiments, it was unsatisfactory for enzyme kinetic studies because
the proportion of BchD that is in the active form in the assay mixture
could not be controlled. The factors that mediate renaturation of BchD
were therefore examined as described below. Renatured BchD (or HisBchD)
provided a consistent preparation for further study of the magnesium
chelatase reaction.
Efficient in vitro renaturation of BchD required DTT and ATP
(Table I). Moreover, the degree of
renaturation was increased by the presence of BchI. A time course of
the renaturation of BchD at 0 °C with BchI, ATP, and
MgCl2 indicated that BchD was maximally renatured at 90 min
(data not shown). The concentration of BchD in the medium did not
appear to have an effect on the renaturation efficiency, because
approximately equal specific activity was obtained with the three
concentrations tested (Table I). The slightly lower activity at higher
BchD concentrations was caused by the higher concentrations of urea in
the assay medium, which ranged from 30 to 120 mM in this
experiment. A BchI:BchD molar ratio of 1:1 was sufficient for maximal
recovery of active BchD (Table II).
Neither further stimulation or inhibition of the renaturation was
observed at higher BchI:BchD ratios. In the R. capsulatus
chromosome, bchI is 5' to bchD and is part of the same transcription unit. This implies that BchI is translated before
BchD, and it is proposed that its presence may aid in the folding of
BchD to its active form in vivo.
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Table I
Requirements for BchD renaturation
BchD protein was solubilized in 6 M urea, 10 mM
Tricine-NaOH, pH 8.0, and 2 mM DTT and then renatured by
rapid dilution into 20 volumes of renaturation medium and maintained at
0 °C for 60 min. Complete renaturation medium contained 50 mM Tricine-NaOH, pH 8.0, 15 mM MgCl2, 4 mM DTT, 4 mM ATP; an ATP regenerating system
consisting of 20 mM phosphocreatine and 20 units/ml of
creatine phosphokinase; and the indicated amount of BchI protein. For
the magnesium chelatase assay, 10-50 µl of the renatured BchD-BchI
mixture was supplemented with 4 µM protoporphyrin IX and
26 µg of BchH protein, additional BchI was added when needed to bring
the final BchI content to the indicated level, the final volume was
adjusted to 100 µl with complete renaturation medium, and the mixture
was incubated for 30 min at 30 °C. ARS, ATP regenerating system.
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Table II
Effect of the BchI:BchD ratio on BchD renaturation
BchD protein solubilized and renatured as described in the legend to
Table I. The renaturation medium contained the indicated ratio of BchI
and BchD proteins. The renatured BchD-BchI mixture was then assayed for
magnesium chelatase activity. All assays (100 µl) contained
renaturation medium and 4 µM protoporphyrin IX, 11.2 µg
of BchD, 33 µg of HisBchH protein, and additional BchI protein to
bring the final amount to 42 µg. Assay mixtures were incubated for 60 min at 30 °C.
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Because BchD was solubilized in 6 M urea and added to assay
medium by dilution from the urea solution, it was important to determine the effect of urea on the magnesium chelatase reaction. The
reaction was progressively inhibited at increasing urea concentrations, with approximately 20% inhibition at 100 mM, 50%
inhibition at 250 mM, and 90% inhibition at 800 mM (Fig. 5). Because the
final urea concentration in the magnesium chelatase assays was usually 30-60 mM, its presence in the assay medium had only a
minor effect on activity.

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Fig. 5.
Effect of urea concentration on magnesium
chelatase activity. Assays (50 µl) were done in triplicate and
contained 1.7 µg of renatured BchD, 3.9 µg of BchI, and 33 µg of
HisBchH in assay buffer with urea added. Incubation was for 30 min at
30 °C. Error bars indicate the S.D. about the mean. The
line is the best fit exponential curve for the data
points.
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Reconstitution of R. capsulatus Magnesium Chelatase
Mutants--
R. capsulatus mutants ZY6 and DB350 contain
insertional disruptions of the bchH and bchI
genes, respectively (2, 17). Magnesium chelatase activity was absent in
extract of either mutant alone, but was present in a mixture of the
extracts from the two mutants (Table
III). Activity was reconstituted in
extract of ZY6 cells supplemented with recombinant BchH. Neither BchD,
BchI, nor a combination of BchD and BchI reconstituted activity of ZY6 extract. Fractionated ZY6 extract from which BchD was removed by high
speed centrifugation and ion exchange chromatography required addition
of both BchH and BchD to restore activity. Similarly, ZY6 extract from
which BchI was partially removed by high speed centrifugation required
addition of both BchH and BchI to restore full activity.
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Table III
In vitro complementation of R. capsulatus magnesium chelatase mutants
Strains ZY6 (bchH ) and DB350
(bchI ) were grown and extracted as described under
"Experimental Procedures." Extract of strain ZY6 (3 ml) was
centrifuged for 1 h at 190,000 × g, and the
glassy pellet was washed once with extraction buffer and resuspended in
0.5 ml of the same buffer to yield the BchD-containing fraction ZY6
(D) (31). The supernatant was purified by cation exchange
chromatography as described under "Experimental Procedures" to
yield the BchI-containing fraction ZY6 (I). Recombinant BchD was
dissolved in 6 M urea, and 2 µl was added to the
reactions where indicated. Incubations were 60 min at 30 °C in 100 µl of complete reaction medium containing the indicated amounts of
proteins from cell extracts and purified recombinant proteins. Because
the various proteins added to the incubation mixture were of different
degrees of purification, the tabulated relative product formation
values have not been normalized to protein concentration.
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Magnesium chelatase activity was not restored to extract of strain
DB350 by the addition of any single recombinant protein, but activity
was partially restored by the addition of both BchD and BchI. The
requirement for both proteins is consistent with the absence of the
BchD in extracts of strain DB350 (Fig.
6). These results suggest that BchI is
needed to stabilize BchD in vivo and are consistent with the
ability of BchI to enhance the renaturation of urea-denatured BchD
in vitro.

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Fig. 6.
Immunoblot. The probe was antibody to
purified R. capsulatus BchD protein. Lane 1 contains purified HisBchD protein; lane 2 contains extract
of R. capsulatus strain ZY6, which has a disrupted
bchH gene; and lane 3 contains extract of
R. capsulatus strain DB350, which has a disrupted
bchI gene. Migration positions of standard proteins with the
indicated molecular masses (in kDa) are shown at the left of
the image.
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Kinetic Properties of Magnesium Chelatase--
The pH optimum for
magnesium chelatase was approximately 8.0 (Fig.
7). Activity dropped to near zero below
pH 6 and above pH 10.5. The time course for product accumulation
exhibited a small lag phase, followed by approximately constant
activity for about 100 min, and lower activity at later times (Fig.
8). Preincubation of BchD and BchI in
assay mixture for 10 min at 30 °C before starting the reaction by
the addition of BchH increased the initial reaction rate but did not
eliminate the lag phase.

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Fig. 7.
pH optimum for magnesium chelatase.
Assays (100 µl) were done in triplicate and contained 1.4 µg of
renatured BchD, 4.8 µg of BchI, and 66 µg of HisBchH in assay
buffer adjusted to the indicated pH and then incubated for 30 min at
30 °C. Error bars indicate the S.D. about the mean.
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Fig. 8.
Reaction time course. Assays (1.0 ml)
contained 110 µg/ml BchD, 140 µg/ml BchI, and 660 µg/ml HisBchH.
Closed circles are for an experiment in which all
ingredients were added in quick succession at the start of the
reaction. Open circles are for an experiment in which all
ingredients except BchH were preincubated for 10 min at 30 °C before
BchH was added to start the reaction.
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A double reciprocal plot of reaction rate versus
protoporphyrin IX concentration indicates Michaelis-Menten kinetics
with respect to protoporphyrin IX (Fig.
9A). The apparent
Km for protoporphyrin IX was calculated to be 1.23 µM. A double reciprocal plot of reaction rate
versus HisBchH concentration indicates Michaelis-Menten kinetics with respect to HisBchH (Fig. 9B). The apparent
Km was calculated to be 17.6 µg/100-µl reaction,
a value that is equal to 1.34 µM for HisBchH, which has a
molecular mass of 131 kDa.

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Fig. 9.
Concentration dependence on protoporphyrin IX
and BchH. All assays (100 µl) contained 5.2 µg of BchI and 8.4 µg of BchD (2 µl of a 6 M urea solution added to start
the reaction). A, for protoporphyrin IX, the incubation
contained 6 µg of HisBchH, and the free protoporphyrin IX
concentration was varied from 0.8 to 4 µM. B,
for BchH, the free protoporphyrin IX concentration was 4 µM, and HisBchH varied from 0.4 to 30 µg. Incubation
was for 60 min at 30 °C. Results are plotted in double-reciprocal
form. The lines are the best fit linear extrapolations for
the data points.
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BchI:BchD Optimal Stoichiometry--
Reactions were done in
incubation mixtures containing constant amounts of BchH and BchI and
varying amounts of BchD, and the activity per unit of BchD was
calculated. The results indicate that the optimal ratio of BchI:BchD is
4 (Fig. 10). This ratio was also
obtained when HisBchD was used (data not shown).

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Fig. 10.
Optimal BchI:BchD stoichiometry. Assays
(100 µl) in triplicate contained 10.8 µg of BchI, 33 µg of
HisBchH, and an amount of renatured BchD sufficient to provide the
indicated BchI:BchD molar ratio. Incubation was 30 min at 30 °C.
Error bars indicate the S.D. about the mean.
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DISCUSSION |
Three R. capsulatus genes, bchI,
bchD, and bchH, have been cloned and
overexpressed in E. coli, and the expressed proteins have
been purified and reconstituted in vitro to yield magnesium chelatase activity. The characterization of this activity and of the
individual subunits that we report here suggests that Mg2+
chelation is a multistep reaction and that the individual subunits may
have multiple roles in the assembly of active enzyme and in the reaction.
The bchI, bchD, and bchH genes were
first shown to be involved in Mg2+ chelation in R. capsulatus by insertional mutagenesis and analysis of the mutant
phenotypes (2, 17). Genes homologous to bchI, bchD, and bchH have been described in several
photosynthetic bacteria and plants. Reconstitution of active magnesium
chelatase from the expressed genes was first reported for R. sphaeroides (18). In that report, bchI and
bchD were co-expressed, but it was not possible to express
active bchD alone. Reconstituted in vitro activity was limited by the amount of BchD present in the reaction mixture. The bchI, bchD, and bchH
genes from the green bacterium C. vibrioforme were cloned,
separately expressed, and recombined in vitro to yield
magnesium chelatase activity (9). To reconstitute activity, it was
necessary to treat the BchD protein, which was expressed as inclusion
bodies, with 6 M urea to solubilize it and then add the
solubilized BchD to assay mixtures containing BchI and BchH. In
contrast, three genes from the cyanobacterium Synechocystis
sp. PCC 6803, designated chlI, chlD, and
chlH, respectively, were cloned and separately expressed to
produce soluble proteins, and the proteins could be recombined in
vitro to yield magnesium chelatase activity (8). Although the
predicted Synechocystis sp. PCC 6803 ChlI and ChlH proteins
are quite similar to the predicted BchI and BchH proteins (51 and 41%
identity to the R. capsulatus proteins, respectively), ChlD
is less similar to BchD (32% identity), and there are large gaps in
the aligned sequences. All of these reports demonstrated that all three
subunits are required for magnesium chelatase activity. However,
further characterization of the activity and characterization of the
individual subunits have not been reported.
As an aid to rapid enzyme subunit purification by nickel-chelating
column chromatography, the three R. capsulatus magnesium chelatase proteins were expressed as NH2-terminally
His-tagged fusion constructs. For two of the subunits, BchD and BchH,
the His-tagged proteins were effective in reconstituting magnesium chelatase activity. However, His-tagged BchI did not reconstitute activity and, moreover, it acted as an inhibitor in incubations containing non-His-tagged BchI. The most likely explanation for the
inhibition is that the His tag prevents catalysis in some way but still
allows HisBchI to interact with BchH and/or BchD and blocks BchI from
interacting constructively with these subunits.
The BchI and BchH proteins were expressed as soluble active
proteins in E. coli, but BchD was expressed as insoluble
inclusion bodies. The insoluble BchD was solubilized in 6 M
urea and was refolded by dilution of the urea to yield active protein.
Optimal refolding required ATP, DTT, and BchI. It has been shown that the presence of a reducing agent, such as DTT, is required for stabilizing magnesium chelatase (19-22) and that magnesium chelatase is sensitive to sulfhydryl reagents (21-24). The requirement of DTT
for maintaining and reconstituting the activity of BchD, both in the
refolding process and in the subsequent enzyme assay, suggests that it
is this subunit that is most sensitive to oxidizing conditions. The ATP
requirement is consistent with the hypothesis that ATP may help to
refold and stabilize BchD by binding to its active site. It has been
reported that pea magnesium chelatase undergoes irreversible loss of
activity at room temperature in the absence of ATP (6, 25).
On the R. capsulatus chromosome, the bchD open
reading frame is immediately downstream of the bchI open
reading frame and is translated from the same transcript. The same
organization of bchI and bchD occurs in C. vibrioforme (26). This conserved gene organization, together with
the fact that BchI is required for optimal refolding of BchD in
vitro, suggests that BchI may be essential for the efficient
refolding and/or stabilization of BchD in vivo. The
difference in the optimal stoichiometry of 1 BchI:1 BchD for refolding
compared with 4 BchI:1 BchD for assay of magnesium chelatase activity
suggests that the function of BchI in BchD refolding and magnesium
chelatase activity may not be directly linked to one another. A lag
phase in the kinetics of the reaction, as was observed previously for
other systems (5, 6, 25), is partially overcome by preincubation of BchI with BchD and ATP, suggesting that the catalytic function of BchI
is in the ATP-dependent activation of BchD. This role is
consistent with the reported ATPase and ATP-ADP phosphate exchange activities of BchI (27).
The R. capsulatus magnesium chelatase proteins expressed in
E. coli were effective in the in vitro
reconstitution of magnesium chelatase activity when added to extracts
of the R. capsulatus magnesium chelatase mutants ZY6 and
DB350. Strain ZY6 has a transposon inserted into the bchH
gene, and recombinant BchH protein restored activity to extracts of ZY6
cells. Strain DB350 has a transposon inserted into the bchI
gene. However, recombinant BchI alone did not restore activity in
extracts of DB350 cells. Restoration of activity required the addition
of both BchI and BchD proteins. The Western blot of the DB350 mutant
showed no detectable BchD protein. The absence of BchD in DB350 cells
is consistent with the hypothesis that BchI is needed to stabilize BchD
in vivo and this hypothesis is also supported by the ability
of BchI to enhance the renaturation of urea-denatured BchD in
vitro.
The ability of magnesium chelatase to function in relatively high
concentrations of urea suggests that the predominant interactions among
the subunits are ionic and/or hydrophobic and that hydrogen bonding
plays a limited role (28). The fact that the BchI and BchD subunits are
separable by ion exchange chromatography (5), which involves high salt
concentrations, indicates that the predominant interactions between
these subunits are ionic. Examination of the kinetic constants, such as
Km values, under different urea concentrations and
different ionic strengths will provide further information on the types
of interactions between the subunits. The Km values
calculated for BchH and protoporphyrin IX were derived from results
using assays containing 120 mM urea. The
Km for BchH indicates a relatively weak interaction between this protein and the BchI and/or BchD subunits. However, it is
possible that these results were influenced by the presence of urea.
The Km for protoporphyrin IX is higher than that
reported for the magnesium chelatases of R. sphaeroides (5) and pea (29), and at least part of the difference may be due to the
presence of urea in the assay.
The fluorescence excitation spectrum of BchH with bound protoporphyrin
IX indicates that there is at least one tryptophan residue in
sufficiently close proximity to the porphyrin binding site to
permit efficient energy transfer from the tryptophan to the porphyrin
(30). The high photosensitivity of the BchH subunit is also consistent
with the close proximity of the bound protoporphyrin IX to a tryptophan
residue on the protein. Excitation transfer of light absorbed by the
tryptophan would provide a pathway for energetic photon energy to reach
the porphyrin.
On the basis of these results, we propose the following reaction scheme
for magnesium chelatase. The BchH subunit forms a stable complex with
the protoporphyrin IX substrate, and the persistence of this complex
throughout the purification suggests that the equilibrium shown in
Reaction 1 is in favor of the complex. The rate of formation of this
complex will influence the kinetics of the reaction.
The optimal stoichiometry of 4:1 for the BchI and BchD
proteins suggests that they may form a complex in that ratio during an
ATP-dependent activation step as shown in Reaction 2. For
the purposes of this model, it is postulated that the complex has the
composition BchI4:BchD, although further work will be
necessary to determine whether the 4:1 optimal component concentration
ratio for enzyme activity actually indicates the existence of a complex with this ratio. It is not known whether this activation is an ATP-dependent complex formation or some other type of
activation, such as activation of a Mg2+ ion. It is not
known whether this step requires ATP hydrolysis.
The product of this activation is then able to use the
protoporphyrin IX bound to the BchH protein as a substrate for
ATP-dependent Mg2+ insertion as shown in
Reaction 3. This reaction apparently requires ATP hydrolysis (6).
This reaction probably occurs in more than one step. The constancy
of the reaction rate after the initial lag phase is completed suggests
that the BchI*BchD complex, once it is formed, is stable during
continued Mg2+ chelation cycles and does not dissociate in
Reaction 3.
 |
ACKNOWLEDGEMENTS |
We thank C. E. Bauer and D. Bollivar for
supplying R. capsulatus strains.
 |
FOOTNOTES |
*
This work was supported by United States National Science
Foundation Grant MCB-9506901 and United States Department of Energy Grant DE-FG02-88ER13918.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
Present address: Macquarie University, School of Biological
Science, North Ryde 2109, Australia.
§
To whom correspondence should be addressed. Tel.: 401-863-3129;
Fax: 401-863-1182; E-mail: sib{at}brown.edu.
The abbreviations used are:
PCR, polymerase chain reaction; DTT, dithiothreitol; Tricine, N-[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]glycine.
 |
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