|
J Biol Chem, Vol. 274, Issue 23, 16141-16146, June 4, 1999
Folding and Stability of Mutant Scaffolding Proteins Defective in
P22 Capsid Assembly*
Barrie
Greene and
Jonathan
King
From the Department of Biology, Massachusetts Institute of
Technology, Cambridge, Massachusetts 02139
 |
ABSTRACT |
Bacteriophage P22 scaffolding subunits are
elongated molecules that interact through their C termini with coat
subunits to direct icosahedral capsid assembly. The soluble state of
the subunit exhibits a partially folded intermediate during equilibrium
unfolding experiments, whose C-terminal domain is unfolded (Greene, B., and King, J. (1999) J. Biol. Chem. 274, 16135-16140).
Four mutant scaffolding proteins exhibiting temperature-sensitive
defects in different stages of particle assembly were purified. The
purified mutant proteins adopted a similar conformation to wild type,
but all were destabilized with respect to wild type. Analysis of the thermal melting transitions showed that the mutants S242F and Y214W
further destabilized the C-terminal domain, whereas substitutions near
the N terminus either destabilized a different domain or affected
interactions between domains. Two mutant proteins carried an additional
cysteine residue, which formed disulfide cross-links but did not affect
the denaturation transition. These mutants differed both from
temperature-sensitive folding mutants found in other P22 structural
proteins and from the thermolabile temperature-sensitive mutants
described for T4 lysozyme. The results suggest that the defects in
these mutants are due to destabilization of domains affecting the weak
subunit-subunit interactions important in the assembly and function of
the virus precursor shell.
 |
INTRODUCTION |
Although the scaffolding proteins of bacteriophage P22 participate
in polymerization of the viral coat monomers into a stable icosahedral
capsid lattice, the spherical complexes of 200-300 scaffolding
subunits assembled within the precursor shells are metastable
structures, dissociating in the cell as a prerequisite to DNA packaging
and dissociating in the test tube under very mild conditions (1-3).
The assembled state of the scaffolding subunits lacks icosahedral
symmetry (4) and, although closely packed, may be only loosely
associated. The dissociated subunits are not covalently modified with
respect to their assembled state and participate in subsequent rounds
of procapsid assembly.
Its biological role in coupled assembly/dissociation cycles suggests
that the scaffolding protein would need to be a conformationally flexible molecule. Although the three-dimensional structure is not
known, Parker et al. (5) estimated dimensions of 232 Å long
by 22 Å wide from analytical ultracentrifugation data. This elongated
molecule does not appear to have a tightly packed hydrophobic core like
that of a typical globular protein, because no protected core was
detected by deuterium exchange (6), and it binds many molecules of
1-1'-bi (4-anilino)naphthalene-5-sulfonic acid (bisANS), a probe for
exposed hydrophobic surfaces on proteins (7). Denaturation and
proteolysis experiments indicated that the C-terminal end of the
molecule was a distinct easily melted domain that interacts with the
coat subunits (8). Low stability of this domain may reflect its need to
undergo conformational transitions during assembly within the cell.
Despite many efforts at their isolation, mutations in the scaffolding
protein gene with physiological defects in folding or assembly have
been recovered at very low frequency, considering the recovery of
mutations in other P22 genes (9, 10). Only four strains of independent
origin defective in scaffolding protein function have been isolated
over a period spanning two decades (11, 12). This represents a property
of the protein, rather than the gene, because nonsense mutations
generating stop codons occur at expected frequencies (10, 13).
By comparison some 70 sites of temperature-sensitive folding
(tsf)1 mutants
have been characterized in the tailspike gene. In the adjacent gene for
the coat protein, some 17 sites of tsf mutations have been
isolated (14). The distinctive feature of these mutants is that they do
not act by destabilizing the native state of the mutant protein; mutant
proteins formed at low temperature are as thermostable as wild type
when incubated at restrictive temperature. This is true both for
tailspike tsf mutants (15-17) and coat tsf mutants (18). In both cases the ts amino acid substitutions act by destabilizing an already thermolabile partially folded intermediate in the folding pathway. At restrictive temperatures these
species associate to form inclusion bodies in vivo and high molecular weight aggregates in vitro (19, 20).
In contrast, no evidence of competing off pathway aggregation reactions
have been detected during scaffolding protein folding either in
vivo or in vitro, even during thermal denaturation (8, 12). The mutant scaffolding proteins expressed by the four
ts strains folded and assembled into procapsid-like
structures within infected cells at both permissive and restrictive
temperatures (12). However, the procapsids formed from the mutant
proteins at restrictive temperatures were not competent for DNA
packaging or other steps in virus maturation (12). Two of the mutant
strains carry single amino acid substitutions in their scaffolding
protein, S242F and Y214W. The other two mutants carry more than one
substitution: R74C/L177I and V45A/R74C/Q149W/A199V. The double mutation
V45A/A199V, however, is
silent.2 The distribution of
the substitutions is shown in Fig. 1.

View larger version (9K):
[in this window]
[in a new window]
|
Fig. 1.
Location of the temperature-sensitive
mutations within the phage P22 scaffolding protein sequence.
|
|
Assembly of a viable procapsid requires the incorporation of a
dodecameric ring of the gene 1 portal protein at one vertex of the shell to form a DNA packaging channel (21). During particle assembly scaffolding subunits presumably interact with coat subunits, with each other, and with portal subunits. The S242F and Y214W mutations in the C-terminal third of the scaffolding sequence are
defective in insertion of the DNA packaging portal into the procapsid
structure (12, 21). The mutant subunits carrying the R74C substitutions
were defective in scaffolding protein release from the procapsid
(12).
We report here the solution properties of the mutant scaffolding
proteins and their behavior during equilibrium unfolding experiments.
To be able to relate the properties of the purified proteins to the
actual defects expressed within cells, it was necessary to characterize
the purified proteins carrying the multiple substitutions because the
severity of the phenotype is affected by the interaction of the substitutions.
The results reported here with the purified mutant proteins indicate
that unlike the tsf mutations in the coat and tailspike subunits, these mutations do destabilize the folded conformation of the
subunit. However, unlike thermolabile ts mutations, of T4
lysozyme for example, which are predominantly buried (22), these
substitutions appear to be on the subunit surface. They are most likely
to be affecting the subunit-subunit interactions involved in the cycle
of assembly and dissociation needed for capsid assembly by
destabilizing local functional regions.
 |
EXPERIMENTAL PROCEDURES |
P22 Phage Strains--
The phage strains used in the preparation
of wild type proteins carried the c1-7 mutation to ensure
entry into the lytic pathway, 13amH101, which delays lysis,
and either 2amH202 or 3amN6, which block DNA
packaging. The mutant strains used for the purification of the
scaffolding proteins are listed in Table
I. The isolation of these mutants is
described by Greene and King (12). Column 1 shows the amino acid
substitutions originally identified from sequencing regions of gene 8. Subsequent characterization of these mutants has revealed additional
mutations.3 These are shown
in column 2 of Table I.
Purification of Wild Type and Mutant Scaffolding
Proteins--
Phage strains carrying the 8ts mutations were
used for the preparation of procapsids containing mutant scaffolding
proteins. Infections with these strains were carried out at 30 °C.
Apart from this the mutant procapsids were prepared by the same
protocol as for wild type (3). Procapsids were obtained from
mutant-infected cells in amounts comparable with preparations of wild
type procapsids. Mutant scaffolding proteins were purified from
procapsids using the protocol previously described for wild type (3),
although a higher concentration of guanidine HCl (0.9 M
instead of 0.5 M) was used to extract scaffolding protein
from R74C/L177I and R74C/Q149W procapsids. The yield of R74C/L177I
mutant scaffolding protein was somewhat less than that of the others
because it was not possible to remove all the R74C/L177I scaffolding
protein from procapsids even after three extractions with guanidine HCl.
Wild type and mutant scaffolding proteins were dialyzed into phosphate
buffer (20 mM K2HPO4, 25 mM NaCl, pH 7.6, with HCl) before use. The concentration
was checked by absorbance at 280 nm, based on an extinction coefficient
of 1.61 × 104 liters mol 1
cm 1 for wild type, R74C/L177I, and S242F; 2.08 × 104 liter mol 1 cm 1 for Y214W;
and 2.21 × 104 liter mol 1
cm 1 for R74C/Q149W. The extinction coefficients of the
wild type and mutant proteins were calculated using the method of
Johnson (23).
Fluorescence and Circular Dichroism Spectra--
Fluorescence
spectra were recorded of wild type or mutant scaffolding proteins at
100 µg/ml (0.3 µM) at constant temperature, with the
excitation wavelength set to 280 nm, and the emission scanned from 300 to 400 nm. The excitation and emission slit widths were 2.5 and 5 nm,
and the PMT voltage was set to 700 V. Circular dichroism spectra were
recorded from 200 to 250 nm at constant temperature in a
0.5-cm-pathlength cell. The spectral bandwidth was 1.5 nm, the step
size was 1 nm, the averaging time was 0.4 s, and five scans were
recorded and averaged for each sample.
Fluorescence Quenching--
KI quenching experiments were
performed in phosphate/NaCl buffer with 10 mM
Na2S203 added to keep the iodide
reduced (24). The final concentration of wild type scaffolding protein
was 100 µg/ml (0.3 µM); that of the two mutant proteins
Y214W and R74C/Q149W was 50 µg/ml because the fluorescence of these
mutants was approximately twice that of the wild type protein. To avoid
possible effects of ionic strength changes on protein conformation, the
ionic strength was held constant by the addition of KCl to give a total
concentration of KI and KCl of 0.25 M. These concentrations
of KI are sufficiently low so as to produce no inner filter effect
(25). Samples were excited at 280 nm, and the emission was monitored at
330 nm. Excitation and emission slit widths were 2.5 and 5 nm, the PMT
voltage was 700, and the temperature was 3 °C.
Thermal Denaturation--
Wild type and mutant scaffolding
proteins were diluted to 100 µg/ml (0.3 µM) in
phosphate/NaCl buffer before use. In some cases DTT was added to 2 mM, and the samples were incubated for an hour at 4 °C
before starting the experiment. Fresh samples were prepared for each
experiment. The samples were heated from 3 to 90 °C, and
denaturation was monitored by either fluorescence intensity at 330 nm
with excitation at 280 nm, or circular dichroism ellipticity at 222 nm
as described in the accompanying paper (8).
 |
RESULTS |
Structure of the Mutant Scaffolding Proteins--
The fluorescence
and CD spectra of the mutant proteins were first compared with that of
wild type to determine whether they folded to similar conformations.
Fig. 2 shows the CD spectra of the wild
type and mutant scaffolding proteins at several temperatures. As
expected, the mutant proteins were, like wild type, predominantly -helical. Even at 3 °C, however, at which point all the proteins should be maximally folded, the mutant proteins all had different CD
spectra than wild type.

View larger version (27K):
[in this window]
[in a new window]
|
Fig. 2.
Secondary structure of wild type and mutant
scaffolding proteins at different temperatures monitored by circular
dichroism. , wild type; , S242F; , Y214W; ,
R74C/L177I; , R74C/Q149W. The protein concentration was 100 µg/ml.
|
|
The secondary structure compositions of the folded proteins were
estimated using the standards of Chang, Wu, and Yang (26). Analysis of
the wild type CD spectrum suggested a composition of 30% -helix,
10% -sheet, 18% turn, and 42% random coil, in excellent agreement
with the composition determined by Teschke et al. (7). The
spectrum did not display the high 222/ 208 ratio typical of a coiled-coil but was characteristic of simple -helices (27).
The spectra of the four mutant proteins at 3 °C were similar to each
other and were composed of 25% -helix, 10% -sheet, 20% turn,
and 45% random coil. The pattern of secondary structure alteration for
the mutants resembled that observed for the wild type protein at higher
temperatures. The spectrum of wild type scaffolding protein at 25 °C
could be fit as 27% -helix, 10% -sheet, 19% turn, and 44%
random coil. These results suggested that the mutants were in a similar
conformation at 3 °C to that adopted by the wild type protein at
higher temperatures. By 90 °C the spectra of the wild type and the
four mutant proteins were superimposible and predominantly random coil,
demonstrating that all had reached the same unfolded state.
The fluorescence spectra of the two mutant proteins without extra
tryptophans were similar to wild type over a range of temperatures; R74C/L177I was almost identical, whereas the fluorescence of S242F was
slightly less, perhaps indicating a slightly less compact structure
(Fig. 3). The fluorescence of both the
mutant proteins containing extra tryptophans, Y214W and R74C/Q149W, was
approximately twice that of wild type, as expected. The spectra of
these two mutants appeared slightly red-shifted with respect to wild
type, suggesting that the new tryptophans might be in more exposed
environments than the wild type tryptophan.

View larger version (20K):
[in this window]
[in a new window]
|
Fig. 3.
Fluorescence emission spectra of wild type
and mutant scaffolding proteins at different temperatures. ,
wild type; , S242F; , Y214W; , R74C/L177I; , R74C/Q149W.
The protein concentration was 100 µg/ml.
|
|
Tryptophan Exposure--
The degree of tryptophan exposure can be
assessed by collisional quenching of fluorescence using iodide ion.
Because iodide is an ionic molecule it cannot penetrate into protein
interiors, so more deeply buried tryptophans are less effectively
quenched. This experiment was carried out at 3 °C, at which point
the proteins would be maximally folded.
A Stern-Volmer plot (24) was used to determine the degree of
fluorescence quenching by iodide of wild type and the two mutant scaffoldings with extra tryptophan residues (Fig.
4). The slope of a Stern-Volmer plot
indicates the degree of quenching; the steeper the slope, the greater
the degree of quenching. The slope for the wild type tryptophan was
about 1, which indicates relatively little quenching, as expected for a
tryptophan mostly protected from solvent. The Stern-Volmer plots for
the mutant proteins are not linear, because two tryptophans of
different accessibility contribute to the data. The initial slopes,
which primarily reflect the influence of the more readily quenched
tryptophan, were 1.6 for R74C/Q149W and 2.7 for Y214W as compared with
a slope of 3.3 obtained for the completely denatured P22 coat protein
(25). The tryptophan at 149 is thus more exposed than that at 134 but may still be partially buried, whereas that at 214 is probably on or
near the surface of the protein.

View larger version (16K):
[in this window]
[in a new window]
|
Fig. 4.
Stern-Volmer plot for the quenching of wild
type and mutant tryptophans by iodide. Wild type scaffolding
protein at 100 µg/ml or Y214W or R74C/Q149W mutant scaffolding
protein at 50 µg/ml was incubated in increasing concentrations of KI.
The fluorescence emission at 330 was measured with the excitation at
280 nm. Fo is the fluorescence in the absence of
iodide, and F is the fluorescence in the presence of iodide.
, wild type; , Y214W; , R74C/Q149W. The line
through the wild type data is a linear fit, whereas the
curves drawn through the mutant data are added to aid the
eye and do not represent fits to any model.
|
|
Thermal Denaturation of Mutant Scaffolding Proteins--
Thermal
melts of all the mutant proteins were performed as for wild type. All
the scaffolding proteins were analyzed at 100 µg/ml, a concentration
at which the scaffolding proteins are almost entirely monomeric
(5),4 so that the effects of
self-association should not affect the observed unfolding process. The
CD spectra demonstrated that the mutant proteins all began with
slightly different structures at the initial temperature (Fig. 2). The
thermal melts, as monitored by CD at 222 nm, showed that all the mutant
proteins were also at least partially destabilized with respect to wild
type (Fig. 5). Cooling of the proteins
back to 3 °C resulted in some loss of the original signal
(approximately 20%), but this effect did not appear to be due to
aggregation and did not vary significantly between the wild type and
mutant proteins.

View larger version (22K):
[in this window]
[in a new window]
|
Fig. 5.
Thermal denaturation of mutant scaffolding
proteins monitored by circular dichroism. Mutant scaffolding
proteins at 100 µg/ml were heated from 3 to 90 °C, and their
denaturation was followed by circular dichroism ellipticity at 222 nm.
The percentage folded at each temperature was determined as described
under "Experimental Procedures." The thermal melt of wild type
protein ( ) is shown for comparison to the mutant protein ( ) in
each case.
|
|
The thermal denaturations of the mutant proteins S242F and Y214W had
similar characteristics. Although these proteins were initially less
structured than wild type, they appeared to be stably folded at low
temperatures. The unfolding transition for both these mutants began
earlier than for wild type. Unlike wild type, the data for these
mutants were not well fit by a two-state model, indicating that one or
more domains was more strongly affected than others. This effect was
more visible for Y214W, for which the early part of the denaturation
curve was shifted to lower temperature, whereas the later half of the
curve corresponded closely to the wild type curve. The mutant S242F
appeared more uniformly destabilized.
The R74C/Q149W and R74C/L177I mutations produced more dramatic
destabilizations. The thermal melts of these mutant proteins were
clearly not two-state but showed a sharp break between two processes at
about 40 °C. The first region, accounting for approximately half of
the total CD signal, was extremely unstable, because it began to
denature at the lowest temperature. The melting of this region appeared
very noncooperative, with the transition being almost flat rather than
sigmoidal. Indeed, this phase resembled the melting of a molten globule
more than a folded protein (28). The rest of the molecule, however, was
as stable as wild type in the case of R74C/Q149W and only slightly
destabilized for R74C/L177I.
Unfolding of New Domains Observed by Fluorescence of Extra
Tryptophans--
The thermal melts of the mutant proteins were also
observed by fluorescence. Two mutant proteins, S242F and R74C/L177I,
contained only the single wild type tryptophan residue. As observed by
fluorescence (Fig. 6), the thermal melts
of these two proteins were similar in shape to that of wild type and
could also be fit by a simple two-state transition model. Both
proteins, however, were somewhat destabilized with respect to wild
type, with Tm values of 54 and 55 °C as compared with a
Tm of 58 °C calculated for the wild type protein (Table
II). The fluorescence data confirmed that
the more stable tryptophan-containing region was not seriously affected by the R74C/L177I substitutions, despite the severe destabilization of
secondary structure observed by CD.

View larger version (22K):
[in this window]
[in a new window]
|
Fig. 6.
Thermal denaturation of mutant scaffolding
proteins monitored by fluorescence. Mutant scaffolding proteins at
100 µg/ml were heated from 3 to 89 °C, and their denaturation was
followed by fluorescence at 330 nm with excitation at 280 nm. The
percentage folded at each temperature was determined as described under
"Experimental Procedures." The thermal melt of wild type protein
( ) is shown for comparison to the mutant protein ( ) in each
case.
|
|
The substitutions that introduced extra tryptophans would be expected
to reveal new phases in unfolding if the tryptophans were in different
domains than the wild type tryptophan residue. The melting curve for
R74C/Q149W was not significantly different from wild type and had a
Tm of 55 °C. The thermal melt of Y214W, however, was
clearly not two-state. These data could be well fit by two transitions,
with Tm values of 54 and 29 °C. Thus it appears that the
presence of an additional tryptophan residue reveals the denaturation
of a second, less stable domain. It is possible that this domain is
somewhat destabilized by the effects of the mutation, as the
differences between the wild type and Y214W denaturation monitored by
CD would also suggest. However, the noncoincidence of the CD and
fluorescence data for the wild type protein (8) demonstrates early
denaturation of some portions of helical structure that is not picked
up by monitoring fluorescence of Trp134 alone. We therefore
think it is likely that the region containing Tyr214
unfolds at lower temperatures than that containing Trp134
in the wild type protein as well as the Y214W mutant. This would be
consistent with previous results demonstrating that the C-terminal half
of the protein is less stable (8).
The early unfolding event seen by CD in the thermal melt of R74C/Q149W
was not observed by fluorescence. This may indicate that the
destabilization of this mutant protein is primarily due to the R74C
mutation, whereas the region around Q149W is not affected by this
substitution. The same may be true for the L177I mutation.
Under the conditions used for these experiments, these two mutant
proteins were disulfide-linked dimers (5).3 These cysteines
must be on the surface of the native conformation. To distinguish the
effects of dimerization from that of the mutation itself, thermal melts
were redone in the presence of 2 mM DTT for these two
mutants and wild type protein (Fig. 7).
Thermal melts monitored by fluorescence showed no difference from wild type or with results in the absence of DTT, suggesting that
dimerization does not alter stability of the region containing
Trp134 or that at 149 in the Q149W mutant strain. By CD,
the monomeric proteins were slightly less stable, but the thermal
denaturation curves had the same characteristic two phase appearance as
in the absence of DTT. Thus it appears that the mutations are
intrinsically destabilizing due to loss of the arginine residue, with
dimerization not exerting a significant effect on stability.

View larger version (25K):
[in this window]
[in a new window]
|
Fig. 7.
Thermal denaturation of mutant scaffolding
proteins in the presence of reducing agent. Scaffolding proteins
at 100 µg/ml were heated from 3 to 90 °C in phosphate buffer
containing 2 mM DTT, and their denaturation was followed by
circular dichroism at 222 nm (A) or fluorescence at 330 nm
with excitation at 280 nm (B). , wild type; ,
R74C/L177I; , R74C/Q149W.
|
|
 |
DISCUSSION |
The mutant proteins studied here were isolated on the basis of
defects caused in the intracellular assembly of the phage procapsid at
temperatures at the high end of the physiological range (39-40 °C).
Both the single amino acid substitutions and multiple amino acid
substitutions acted to destabilize the conformation of the purified
proteins. The fluorescence quenching experiments indicated that the two
tryptophans introduced are at the protein surface. The cysteine
substitution for arginine must also be at the protein surface. The
location of the phenylalanine at the Ser242 site is unclear.
Temperature-sensitive mutations fall into at least two categories:
thermolabile mutants, which destabilize the native state of the folded
protein (23), and temperature-sensitive folding mutants, which do not
affect the stability of the folded state but destabilize folding
intermediates (29-31). ts mutants of T4 lysozyme represent
the thermolabile class. The sites of the ts substitutions
are buried in the protein and are thought to act by destabilizing the
hydrophobic core (22). In contrast the tsf mutants of the
P22 tailspike are predominantly at the protein surface (32, 33).
The scaffolding ts mutants fit neither class. At least three
of them are at the protein surface, and yet they appear to destabilize the native state. We believe this reflects the distinct properties of
the scaffolding protein, with an extended, flexible structure that
lacks a typical hydrophobic core. Folding of such a protein is expected
to be a simple process that would not involve any thermal-sensitive
folding intermediates. Due to its lack of packed structure, most
residues would be relatively exposed to the solvent, and mutant
substitutions would have mainly local effects. The observed functional
defects of the mutations examined here probably result from
destabilizing the conformation of segments involved in subunit-subunit
assembly and dissociation reactions.
A recently proposed model for scaffolding protein structure consisted
of two elongated domains made up of helical segments (34). Interactions
between the two halves of the protein appeared to be important for
stabilization of the C-terminal domain, which was markedly less stable
than the full-length protein when expressed as a fragment (34). This
model is supported by our results, because all the mutations result in
both some loss of secondary structure even at 3 °C as well as a
decrease in cooperativity of unfolding, suggesting that localized
unfolding in one part of the protein disrupts its interactions with the
other domain and may result in some destabilization of these regions as well.
The Portal-binding Domain--
The mutations S242F and Y214W block
the incorporation of the DNA packaging portal into procapsids,
indicating that these mutations affect a scaffolding protein site
required either for binding the portal or forming an initiation complex
to which the portal is recruited. Both mutations appeared to slightly
destabilize a C-terminal region, but S242F differed from Y214W in also
affecting the stability of N-terminal domains as observed by CD. This
difference may explain why S242F also blocks incorporation of the pilot
proteins, whereas Y214W does not (12).
A Scaffolding Release Domain--
The proteins carrying the
R74C/Q149W and R74C/L177I substitutions had significantly decreased
stability of a large portion of secondary structure. This
destabilization did not seem to be affected by the formation of
disulfide-linked dimers between the scaffolding protein subunits.
Within cells these mutants impaired the release of the scaffolding
subunits from the procapsid (12). These mutant sites seem unlikely to
be part of a coat-binding region given the identification of the
extreme C terminus as the essential coat-binding region (8). In
addition, a cloned scaffolding fragment lacking the N-terminal 140 residues (including Arg74) could assemble into procapsids
in vitro (35).
Instead, the site of mutation may be a region involved in
scaffolding-scaffolding binding. This suggestion is consistent with recent studies of scaffolding proteins from herpesviruses, which have
identified regions N-terminal to the coat-binding domain that mediate
scaffolding-scaffolding interactions in vitro (36-38). It
is striking that although the mutant proteins are severely destabilized, the phenotypic effect is tighter binding within the
capsid lattice (12). Because introduction of the cysteine residues
permits dimerization in vitro, this could be retarding the
exit of scaffolding molecules by blocking their exit through the
channels. This seems unlikely to be the case in vivo, given the reducing environment of the cytoplasm but needs further study.
Taken together these results are most consistent with the idea that the
mutations alter a domain with a specific active function, for example
of a scaffolding "release switch," that it can no longer perform.
The mutations may directly disrupt a release domain by destabilization.
Alternatively, the mutations may disrupt interactions between domains,
as indicated by the dramatic loss in unfolding cooperativity observed
by CD, so that the release signal cannot be propagated from the
N-terminal domain that interacts with other scaffolding protein
subunits to the C-terminal domain involved in binding to the coat protein.
 |
ACKNOWLEDGEMENT |
We thank Peter E. Prevelige, Jr. for
communication of unpublished results.
 |
FOOTNOTES |
*
This work was supported by National Institutes of Health
Grant GM17.980, a National Institutes of Health Biotechnology Training Grant, and a fellowship from the W. M. Keck Foundation.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
Present address: G. W. Hooper Foundation, UCSF, San
Francisco, CA 94143.
2
B. Greene, unpublished observations.
3
B. Greene, P. E. Prevelige, Jr., and J. King, unpublished observations.
4
P. E. Prevelige, Jr., unpublished observations.
 |
ABBREVIATIONS |
The abbreviations used are:
tsf, temperature-sensitive for folding;
ts, temperature-sensitive;
DTT, dithiothreitol.
 |
REFERENCES |
-
King, J.,
and Casjens, S.
(1974)
Nature
251,
112-119[CrossRef][Medline]
[Order article via Infotrieve]
-
Fuller, M. T.,
and King, J.
(1981)
Virology
112,
529-547[CrossRef][Medline]
[Order article via Infotrieve]
-
Prevelige, P. E., Jr.,
Thomas, D.,
and King, J.
(1988)
J. Mol. Biol.
202,
743-757[CrossRef][Medline]
[Order article via Infotrieve]
-
Thuman-Commike, P. A.,
Greene, B.,
Jakana, J.,
Prasad, B. V. V.,
King, J.,
Prevelige, P. E.,
and Chiu, W.
(1996)
J. Mol. Biol.
260,
85-98[CrossRef][Medline]
[Order article via Infotrieve]
-
Parker, M. H.,
Stafford, W. F., III,
and Prevelige, P. E., Jr.
(1997)
J. Mol. Biol.
268,
655-665[CrossRef][Medline]
[Order article via Infotrieve]
-
Tuma, R.,
Prevelige, P. E., Jr.,
and Thomas, G. J., Jr.
(1996)
Biochemistry
35,
4619-4627[CrossRef][Medline]
[Order article via Infotrieve]
-
Teschke, C. M.,
King, J.,
and Prevelige, P. E., Jr.
(1993)
Biochemistry
32,
10658-10665[CrossRef][Medline]
[Order article via Infotrieve]
-
Greene, B.,
and King, J.
(1998)
J. Biol. Chem.
274,
16135-16140[Abstract/Free Full Text]
-
Smith, D. H.,
Berget, P. B.,
and King, J.
(1980)
Genetics
96,
331-352[Abstract/Free Full Text]
-
Casjens, S.,
Eppler, K.,
Sampson, L.,
Parr, R.,
and Wyckhoff, E.
(1991)
Genetics
127,
637-647[Abstract]
-
Bazinet, C.,
and King, J.
(1988)
J. Mol. Biol.
202,
77-86[CrossRef][Medline]
[Order article via Infotrieve]
-
Greene, B.,
and King, J.
(1996)
Virology
225,
82-96[CrossRef][Medline]
[Order article via Infotrieve]
-
King, J.,
Hall, C.,
and Casjens, S.
(1978)
Cell
15,
551-560[CrossRef][Medline]
[Order article via Infotrieve]
-
Gordon, C. L.,
and King, J.
(1993)
J. Biol. Chem.
268,
9358-9368[Abstract/Free Full Text]
-
Goldenberg, D. P.,
and King, J.
(1981)
J. Mol. Biol.
145,
633-651[CrossRef][Medline]
[Order article via Infotrieve]
-
Sturtevant, J. M., Yu, M.-H.,
Haase-Pettingell, C.,
and King, J.
(1989)
J. Biol. Chem.
264,
10693-10698[Abstract/Free Full Text]
-
Thomas, G. J.,
Becka, R.,
Sargent, D., Yu, M.-H.,
and King, J.
(1990)
Biochemistry
29,
4181-4187[CrossRef][Medline]
[Order article via Infotrieve]
-
Galisteo, M. L.,
Gordon, C. L.,
and King, J.
(1995)
J. Biol. Chem.
270,
16595-16601[Abstract/Free Full Text]
-
Speed, M.,
Wang, D. I. C.,
and King, J.
(1995)
Protein Sci.
4,
900-908[Medline]
[Order article via Infotrieve]
-
Speed, M.,
Wang, D. I. C.,
and King, J.
(1996)
Nat. Biotechnol.
14,
1283-1287[CrossRef][Medline]
[Order article via Infotrieve]
-
Bazinet, C.,
Benbaset, J.,
King, J.,
Carazo, J.,
and Carracosa, J.
(1988)
Biochemistry
27,
1849-1856[CrossRef][Medline]
[Order article via Infotrieve]
-
Alber, T.,
Sun, D. P.,
Nye, J. A.,
Muchmore, D. C.,
and Matthews, B. W.
(1987)
Biochemistry
26,
3754-3758[CrossRef][Medline]
[Order article via Infotrieve]
-
Johnson, W. C.
(1988)
Annu. Rev. Biophys. Biophys. Chem.
17,
145-166[CrossRef][Medline]
[Order article via Infotrieve]
-
Lakowicz, J. R.
(1983)
Principles of Fluorescence Spectroscopy, pp. 279-283, Plenum Press, New York
-
Teschke, C. M.,
and King, J.
(1993)
Biochemistry
32,
10839-10847[CrossRef][Medline]
[Order article via Infotrieve]
-
Chang, C. T.,
Wu, C.-S.,
and Yang, J. T.
(1978)
Anal. Biochem.
91,
13-31[CrossRef][Medline]
[Order article via Infotrieve]
-
Zhou, N. E.,
Kay, C. M.,
and Hodges, R. S.
(1992)
J. Biol. Chem.
267,
2664-2670[Abstract/Free Full Text]
-
Ptitsyn, O. B.
(1987)
J. Protein Chem.
6,
273-293
-
Goldenberg, D, P.,
Smith, D., H.,
and King, J.
(1983)
Proc. Natl. Acad. Sci. U. S. A.
80,
7060-7064[Abstract/Free Full Text]
-
Mitraki, A.,
Fane, B.,
Haase-Pettingell, C.,
Sturtevant, J.,
and King, J.
(1991)
Science
253,
54-58[Abstract/Free Full Text]
-
King, J.,
Haase-Pettingell, C.,
Robinson, A. S.,
Speed, M.,
and Mitraki, A.
(1996)
FASEB J.
10,
57-66[Abstract]
-
Steinbacher, S.,
Seckler, R.,
Miller, S.,
Steipe, B.,
Huber, R.,
and Reinemer, P.
(1994)
Science
265,
383-386[Abstract/Free Full Text]
-
Haase-Pettingell, C.,
and King, J.
(1997)
J. Mol. Biol.
267,
88-102[CrossRef][Medline]
[Order article via Infotrieve]
-
Tuma, R.,
Parker, M. H.,
Weigele, P.,
Sampson, L.,
Sun, Y.,
Krishna, N. R.,
Casjens, S.,
Thomas, G. J., Jr.,
and Prevelige, P. E., Jr.
(1998)
J. Mol. Biol.
281,
81-94[CrossRef][Medline]
[Order article via Infotrieve]
-
Parker, M. H.,
Jablonsky, M.,
Casjens, S.,
Sampson, L.,
Krishna, N. R.,
and Prevelige, P. E., Jr.
(1997)
Protein Sci.
6,
1583-1586[Medline]
[Order article via Infotrieve]
-
Desai, P.,
and Person, S.
(1996)
Virology
220,
516-521[CrossRef][Medline]
[Order article via Infotrieve]
-
Pelletier, A.,
Do, F.,
Brisebois, J. J.,
Lagace, L.,
and Cordingley, M. G.
(1997)
J. Virol.
71,
5197-5208[Abstract]
-
Wood, L. J.,
Baxter, M. K.,
Plafker, S. M.,
and Gibson, W.
(1997)
J. Virol.
71,
179-190[Abstract]
Copyright © 1999 by The American Society for Biochemistry and Molecular Biology, Inc.

CiteULike Complore Connotea Del.icio.us Digg Reddit Technorati What's this?
This article has been cited by other articles:

|
 |

|
 |
 
P. A. Thuman-Commike, B. Greene, J. Jakana, A. McGough, P. E. Prevelige, and W. Chiu
Identification of Additional Coat-Scaffolding Interactions in a Bacteriophage P22 Mutant Defective in Maturation
J. Virol.,
April 15, 2000;
74(8):
3871 - 3873.
[Abstract]
[Full Text]
|
 |
|

|
 |

|
 |
 
B. Greene and J. King
In Vitro Unfolding/Refolding of Wild Type Phage P22 Scaffolding Protein Reveals Capsid-binding Domain
J. Biol. Chem.,
June 4, 1999;
274(23):
16135 - 16140.
[Abstract]
[Full Text]
[PDF]
|
 |
|
Copyright © 1999 by the American Society for Biochemistry and Molecular Biology.
|
Advertisement
Advertisement
|