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J Biol Chem, Vol. 274, Issue 31, 21539-21543, July 30, 1999
From the The human immunodeficiency virus type-1 (HIV-1)
transframe protein p6* is located between the structural and enzymatic
domains of the Gag-Pol polyprotein, flanked by the nucleocapsid (NC)
and the protease (PR) domain at its amino and carboxyl termini,
respectively. Here, we report that recombinant highly purified HIV-1
p6* specifically inhibits mature HIV-1 PR activity. Kinetic analyses
and cross-linking experiments revealed a competitive mechanism for PR
inhibition by p6*. We further demonstrate that the four
carboxyl-terminal residues of p6* are essential but not sufficient for
p6*-mediated inhibition of PR activity. Based on these results, we
suggest a role of the transframe protein p6* in regulating HIV-1 PR
activity during viral replication.
Translation of human immunodeficiency virus type-1
(HIV-1)1 genomic RNA results
in the production of two polyprotein precursors, Gag and Gag-Pol
(reviewed in Ref. 1). The 55-kDa Gag precursor contains the structural
proteins matrix (MA), capsid (CA), and nucleocapsid (NC), in addition
to the p2, p1, and p6 domains (MA-CA-p2-NC-p1-p6) (2). The Gag-Pol
polyprotein is generated by a Gag and Gag-Pol polyproteins are transported to the plasma membrane
where assembly of type-C retroviruses and lentiviruses typically occurs
(5, 6). During particle assembly, the viral PR cleaves the Gag and
Gag-Pol precursors into the structural and functional proteins required
for viral replication (7). Although PR activity has been observed
within the cytoplasma of infected cells, the cleavages that lead to the
mature proteins incorporated into virions are late events, probably
occurring in the last stages of budding as the virion is being readied
for release from the cell (Ref. 8; reviewed in Ref. 9).
The mature HIV-1 PR is an obligatory dimer of identical 11-kDa
subunits, each contributing one of the two catalytic aspartic residues.
In contrast, the cell-derived members of the aspartic PR family are
monomeric enzymes with two Asp-Thr-Gly-containing domains (10-13). The
unique dimeric structure of retroviral PRs is mainly stabilized by an
antiparallel The activation of HIV-1 PR, i.e. the dimerization and
autocatalytic release from Gag-Pol, is a critical step in the viral life cycle. Premature processing by a PR activated too early results in
separation of Gag and Gag-Pol domains from critical transport signals
and prevents particle assembly and release, whereas inhibition of PR
activation causes a severe defect in Gag polyprotein processing and a
complete loss of viral infectivity (15-20). However, the molecular
mechanisms leading to PR activation are currently unknown. The 68-amino
acid transframe protein p6* encoded by the pol open reading
frame directly upstream of the PR region has not been ascribed a
specific function and is in a position corresponding to that of the
prosegment observed in other aspartic PRs. Based on this analogy, it
has been suggested that the p6* region regulates HIV-1 PR activity in a
manner similar to the pepsinogen propart peptide and that autocatalytic
release of PR from p6* may be a triggering event in HIV polyprotein
processing (21, 22). Support for this hypothesis has primarily been
drawn from the observation that deletion of the p6* region in a Gag-PR
precursor led to enhanced polyprotein processing in an in
vitro translation system (21).
In the present study, we have analyzed the interaction of HIV-1 PR and
the viral transframe protein p6* in vitro using recombinant highly purified proteins. We report that p6* specifically inhibits mature HIV-1 PR activity. We have studied the mechanism of inhibition and mapped the region in p6* responsible for PR regulation. Based upon our results, we suggest a mechanism for PR activation different from that of zymogen conversion, in which the carboxyl-terminal residues of the transframe protein p6* block the substrate binding cleft of HIV-1 PR after amino-terminal autoprocessing of the viral enzyme.
Proteins and Peptides--
HIV-1 PR was expressed and purified
according to Ref. 23. Enzyme concentrations were determined by
active-site titration (24) using inhibitor Ro 31-8959 (25) kindly
provided by Roche Products Ltd. The recombinant p6, p6*M1, p6*M2,
p6*M3, and p6*M4 proteins were prepared essentially as described
earlier for wild-type p6* (26). Briefly, proteins were expressed in
Escherichia coli M15[pREP4] as fusion proteins with
glutathione S-transferase using the pGEX vector system
(Amersham Pharmacia Biotech). After cell breakage the soluble part of
the glutathione S-transferase fusion proteins was
affinity-purified using glutathione-Sepharose matrix. Afterward p6 and
p6* proteins were removed from the matrix by thrombin digestion. The
isolated proteins were further purified by size exclusion
chromatography and concentrated by ultrafiltration. The purification
steps were monitored by SDS-polyacrylamide gel electrophoresis (27),
followed by silver staining of the proteins and by Western blot
analysis with polyclonal rabbit antisera raised against purified
glutathione S-transferase fusion proteins. Protein concentrations were calculated from absorption spectra according to
Gill and von Hippel (28). The chromogenic substrate
Lys-Ala-Arg-Val-Nle-Phe(p-NO2)-Glu-Ala-Nle-NH2, initially described by Richards et al. (29), and the
unmodified tetrapeptide Ser-Phe-Asn-Phe-COOH were purchased from Bachem
and Dr. G. Arnold (Genzentrum München, Germany), respectively.
The chemical composition and purity of synthetic oligopeptides were confirmed by mass spectrometry.
PR Inhibition Assay--
The ability of recombinant proteins and
the tetrapeptide Ser-Phe-Asn-Phe-COOH to inhibit PR activity was
determined in a continuous spectrophotometric assay by monitoring the
decrease in absorbance at 295 nm associated with the hydrolysis of the
chromogenic substrate Lys-Ala-Arg-Val-Nle-Phe(p-NO2)-Glu-Ala-Nle-NH2.
Measurements were carried out on an Uvikon 930 spectrophotometer
(Kontron Instruments) equipped with a stirring device and a
thermostatted cell holder maintained at 25 °C using a quartz cuvette
with 9.5-mm path length and a final volume of 1.8 ml. Assays were
conducted at pH 5.0, in 0.1 M sodium acetate, 4 mM EDTA, and 5 mM dithiothreitol. Reactions were initiated by adding enzyme to a final concentration of 22 nM active dimer, and progress curves were recorded for 4 min, thereby collecting 600 data points. The initial rate was
determined as the slope of the absorbance change during the linear
phase of the reaction (up to 2 min) using the software package of the instrument. The protein or peptide concentration that inhibited substrate cleavage by 50% was designated the IC50.
Cross-linking of HIV-1 PR--
Cross-linking reactions involved
preincubating PR (100 nM total dimer) for 40 min at
25 °C with or without p6 or p6* (100 µM) in 100 µl
of buffer consisting of 20 mM sodium phosphate, pH 7.5, and
1 mM dithiothreitol. The homobifunctional cross-linker disuccinimidyl suberate (DSS, spacer arm length 11.4 Å) was obtained from Pierce and dissolved in dimethyl sulfoxide, which was added at 1%
of the reaction volume, to give a final DSS concentration of 0.24 mM. Control samples received solvent only. Samples were reacted for 2 min, quenched with 40 mM Tris, and the
proteins were precipitated by adding 10% trichloroacetic acid and 0.5 mg/ml sodium deoxycholate. The pellets were washed with ice-cold
acetone and air-dried. The proteins were resolved on 16%
SDS-polyacrylamide gels (30), electroblotted onto nitrocellulose, and
probed with polyclonal antiserum ARP413 specific for HIV-1 PR obtained
from the Medical Research Council AIDS Directed Program Reagent
Project. The bands were visualized by enhanced chemiluminescence as
recommended by the manufacturer (Amersham Pharmacia Biotech).
Autoradiograms were scanned and cropped with Adobe Photoshop. Reaction
products were quantitated with the Matrix program (QuantaVision,
Canada) from the generated TIFF file.
Recombinant p6* Inhibits Mature HIV-1 PR Activity--
To
investigate a possible regulatory function of the transframe protein
p6* on mature HIV-1 PR activity, both proteins were produced in
bacterial expression systems and purified to homogeneity. The effect of
p6* on PR activity was then tested in a continuous enzymatic assay by
monitoring the absorption change associated with the cleavage of a
chromogenic substrate. The comparison of initial reaction velocities in
the presence and absence of p6* revealed that the Gag-Pol transframe
protein inhibits mature HIV-1 PR in a
concentration-dependent manner. The inhibition
yielded a linear Dixon plot, and the IC50 value was
determined to be 13 µM. In contrast, the equally sized
HIV-1 Gag protein p6, which was produced and purified the same way, did
not significantly alter proteolytic activity (Fig.
1).
Determination of the Inhibition Mechanism--
Due to the
obligatory dimeric structure of the HIV-1 PR, there are at least two
possibilities for an inhibitor (I) to influence PR activity. It can
either bind to active dimers (D), thereby competing with substrate (5)
binding, or it can bind to inactive monomers (M) thereby preventing
dimerization (Scheme 1). Given an earlier
report that the carboxyl-terminal hexapeptide of p6* acts as a
dimerization inhibitor of HIV-1 PR (31), we questioned whether
full-length p6* protein also inhibits PR activity by interfering with
dimerization. Since PR inhibition assays were started with highly
concentrated dimeric PR and dimerization inhibitors bind exclusively to
PR monomers, p6* can only act as dimerization inhibitor if significant
dimer dissociation occurs during data collection. To test the dimer
stability under our experimental conditions, we determined the
time-dependent PR inactivation caused by dimer dissociation
during preincubation in assay buffer. A plot of remaining PR activity
versus preincubation time fits a first-order exponential and
yielded an activity decay rate of 5.84 h
To further support this conclusion, we next studied the effect of p6*
on the time-dependent inactivation of HIV-1 PR following dilution. For these experiments the enzyme was preincubated in the
presence of either p6* or control protein p6, and the activity as a
function of time was examined. As shown in Fig. 2A, presence of p6* decreased the rate of HIV-1 PR inactivation, while p6 had no
significant effect on the kinetics of PR activity decrease. The finding
that presence of p6* obviously results in a specific stabilization of
the HIV-1 PR dimer suggested that p6* might bind to the active-site of
the enzyme.
This hypothesis was further tested in cross-linking reactions of HIV-1
PR. As both subunits of retroviral PRs equally contribute to the
substrate binding region an inhibitor interacting with the active site
should be able to shift the PR monomer/dimer equilibrium to the dimer
form. In accordance with the kinetic data the presence of p6* in
cross-linking reactions resulted in a stabilization of the PR dimer
(Fig. 2B, lane 4), whereas the control
protein p6 had no influence on the PR monomer/dimer equilibrium (Fig. 2B, lane 3). Other control
polypeptides unrelated to HIV-1 but of similar size as the p6* protein,
like lysozyme and aprotinin, were also found to be without effect on
the amount of dimer (data not shown). The additional band observed in
lanes 2-4 has probably resulted from
autodegradation of PR between amino acids Leu5 and
Trp6 (32). Densitometric analyses of three such experiments
revealed that p6* increased the relative amount of dimer by 12%, while presence of p6 had no significant effect on the relative amount of
dimer detected (Fig. 2B, top).
The type of inhibition of HIV-1 PR by p6* was further characterized by
steady-state kinetic analysis. HIV-1 PR activity was measured with
substrate concentrations of 10-50 µM and 0, 5, or 10 µM p6*. Fig. 2C shows double-reciprocal
(Lineweaver-Burk) plots of the initial reaction rate
versus concentration of substrate. The lowest
line in Fig. 2C represents the results obtained
in the absence of p6*. Increasing concentrations of p6* affected only
the Km and not the Vmax
value, leading to a single intercept of the linear regression lines on
the velocity axis of the Lineweaver-Burk plot. The slopes of the lines
in Fig. 2C were replotted against the concentration of p6*
and the result is shown in the inset of Fig. 2C.
The linearity of this replot is indicative of simple competitive inhibition.
Carboxyl-terminal Residues of p6* Are Essential for PR
Inhibition--
The HIV-1 transframe protein p6* spans the sequence of
two PR half-substrates (NC-p6* and p6*-PR) and contains an internal PR
cleavage site between Phe8 and Leu9 (33,
34).2 To map the region in
p6* responsible for competitive inhibition of HIV-1 PR, we analyzed the
inhibitory potency of p6* deletion mutants lacking either the internal
PR cleavage site spanning amino acids 5-12 (p6*M1) or the four
carboxyl-terminal residues that are part of the p6*-PR cleavage site
sequence (p6*M2). These experiments revealed that p6* deletions
affecting the PR cleavage site between Phe8 and
Leu9 did not significantly impair PR inhibition compared
with wild-type p6*, whereas the p6* mutant missing the
carboxyl-terminal cleavage site residues exhibited virtually no
inhibitory potential (Fig. 3A). Thus, we conclude that
p6*-induced PR inhibition is dependent on the carboxyl-terminal
cleavage site residues
Ser65-Phe66-Asn67-Phe68.
To examine whether the inhibitory effect of wild-type p6* is
distinguishable from PR inhibition by Ser-Phe-Asn-Phe, we analyzed the
influence of a synthetic oligopeptide corresponding to positions P4-P1
of the p6*-PR cleavage site (nomenclature in accordance with Ref. 35).
These experiments revealed that the tetrapeptide Ser-Phe-Asn-Phe-COOH
alone is a rather poor inhibitor of HIV-1 PR activity (Fig.
3A, inset). The IC50 value of 581 µM for this inhibition is almost 45-fold higher than that
for PR inhibition by full-length p6*. Thus, the four carboxyl-terminal
residues of p6* are essential but not sufficient for HIV-1 PR inhibition.
To further confirm the role of the carboxyl-terminal residues of p6* in
PR inhibition, we tested whether the inhibitory potency of p6* can be
improved by replacing the natural sequence Ser-Phe-Asn-Phe by
Ser-Tyr-Glu-Leu, for which molecular modeling studies predicted stronger interactions with the substrate binding cleft of the HIV-1 PR.
Indeed, the p6* mutant p6*M3 containing the carboxyl-terminal sequence
Ser65-Tyr66-Glu67-Leu68
was more active in PR inhibition assays than wild-type p6*
(IC50 = 2.7 µM, Fig. 3B).
In contrast, inserting the carboxyl-terminal residues Ser-Phe-Asn-Phe
internally into the p6* protein resulted in a p6* mutant (p6*M4)
with reduced inhibitory potency compared with wild-type p6* (Fig.
3B). Apparently, the sequence Ser-Phe-Asn-Phe must be freely
accessible at the very carboxyl terminus of p6* to inhibit PR activity efficiently.
In this report, we show for the first time that recombinant p6*
protein acts as an inhibitor of mature HIV-1 PR activity, a finding
that considerably extends previous observations suggesting a potential
role of the pol-encoded transframe protein in regulating PR
function (21, 31, 34, 36-40). For comparison, neither recombinant nor
synthetic p6 Gag protein affects PR activity in vitro (this
study and Ref. 41). This clearly demonstrates that PR inhibition is not
common to all Gag and Gag-Pol cleavage products rather than specific
for p6*.
The IC50 value for HIV-1 PR inhibition by wild-type p6*
in vitro is 13 µM. The binding affinity of p6*
is thus very similar to that reported for the well-known inhibitor of
aspartic PRs pepstatin A, which has been shown to block HIV-1
replication in cell culture when added to the culture medium in a
concentration of 100 µM (42, 43). Given Gag protein
concentrations >5 mM in the HIV-1 virion and a ratio of
approximately 1:20 for packaging of Gag-Pol and Gag precursors, the p6*
concentration in viral particles is at least 250 µM.
Regarding the comparably low IC50 value, we strongly
suggest an inhibitory function of p6* on PR activity also during viral replication.
The possible molecular mechanism of p6*-mediated PR regulation has been
controversially discussed during recent years. There is evidence from
in vitro translation experiments that p6* is wrapped around
the PR in a manner similar to the pepsinogen prosegment and prevents
premature precursor processing by rendering the active-site and
substrate binding cleft inaccessible (21). It has been also proposed
that p6* affects PR activation by interfering with dimerization of PR
domains in Gag-Pol precursors (37). Blockage of the release of mature
PR from a Gag-PR polyprotein by introducing mutations into the
amino-terminal cleavage site of the PR domain suggested another,
different mechanism of p6*-induced PR regulation. Examination of the PR
species generated in this experiment after autoprocessing in E. coli revealed several extended PR forms with amino termini in p6*.
These 14-18-kDa p6*-PR intermediates do not appear to be hydrolyzed
readily and have been proposed to occupy the substrate binding cleft of
the PR precursor, thereby delaying the extent of overall
processing (38).
While the molecular details of p6*-PR interaction are difficult to
explore by means of cellular systems, the use of quantitative in
vitro assays for study of p6* and PR as purified proteins allowed us to carefully analyze the molecular mechanism of p6*-mediated PR
inhibition. Our data demonstrate that p6* is a competitive inhibitor of
mature HIV-1 PR activity and that PR regulation is dependent on
carboxyl-terminal residues
Ser65-Phe66-Asn67-Phe68
of p6*. By contrast, Schramm and colleagues (31) have reported that
synthetic hexapeptide Thr-Val-Ser-Phe-Asn-Phe, which corresponds to p6*
residues 63-68, is a dimerization inhibitor of HIV-1 PR activity
in vitro. In this study a rapid equilibrium assumption for
PR dissociation was used for both the collection and treatment of
kinetic data. Our results show, however, that HIV-1 PR dissociation is
rather slow at pH 5.0 and 25 °C. This observation is in perfect agreement with data from Darke and colleagues (44), who applied subunit
exchange to investigate the interconversion between the active dimer of
HIV-1 PR and its inactive monomers . The Asp25 Studies on the in vivo processing of Gag-Pol have been
restricted by the short lifetime of Gag-Pol cleavage intermediates. Therefore, the mechanism of PR activation and the pathway of Gag-Pol maturation are still far from clear. Moreover, little is known about
what inhibits the proteolytic activity of HIV-1 PR after it has
completed precursor processing during the maturation phase of the viral
life cycle. Gag-Pol polyproteins are tightly co-packaged as a Gag shell
in a ratio of about 1 to 20 in immature virions. Due to the tight
packaging, the motion of Gag-Pol inside of the Gag shell and the
accessibility of cleavage sites for PR enclosed in Gag-Pol seem to be
extremely limited. Therefore, it is reasonable to assume the cleavage
at the amino terminus of HIV-1 PR and the release of PR from Gag to be
an early event in the proteolytic cascade. In support of this view,
peptide substrates representing the p6*-PR cleavage site have been
demonstrated to have a relatively low Km compared
with oligopeptides corresponding to other Gag or Pol cleavage sites
(reviewed in Ref. 45), suggesting that this might be indeed the first
site to be attacked in the HIV-1 precursor proteins. Based upon our
results, we presume that after amino-terminal autoprocessing the free
carboxyl-terminal end of p6* may function to block the substrate
binding cleft of the PR precursor and prevent Gag and Gag-Pol
processing until the polyproteins are confined in budding particles and
readied for further maturation. As soon as viral maturation has been
completed, p6* might additionally function in restricting HIV-1 PR
activity in released particles in order to prevent unspecific
degradation of viral proteins. Such product inhibition has also been
proposed for the Gag-derived p2 peptide, which blocks HIV-1 PR activity in vitro with an efficiency similar to that of wild-type p6*
(46). The finding that the p2 domain regulates sequential
proteolytic processing required to produce fully infectious virions
(47) clearly indicates that an in vitro binding affinity in
the low micromolar range is basically sufficient to modulate HIV-1
protease activity during viral replication.
Thus, in sum, our results provide strong evidence for the idea that the
Gag-Pol transframe protein p6* is also involved in regulation of HIV-1
PR activity during viral replication.
We are grateful to D. Bailey and M. Page for
antiserum to HIV-1 PR, which was obtained from the Medical Research
Council AIDS Directed Program Reagent Project.
*
This work was supported by Grant Wo 227/7-1 VII from
the Deutsche Forschungsgemeinschaft (to R.W.).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
¶
To whom correspondence should be addressed. Tel.:
49-941-944-6452; Fax: 49-941-944-6402; E-mail:
ralf.wagner@klinik.uni-regens burg.de.
2
C. Paulus and R. Wagner, manuscript in preparation.
The abbreviations used are:
HIV-1, human
immunodeficiency virus type-1;
MA, matrix;
CA, capsid;
NC, nucleocapsid;
PR, protease;
Phe(p-NO2), para-nitrophenylalanine;
Nle, norleucine;
DSS, disuccinimidyl suberate.
Competitive Inhibition of Human Immunodeficiency Virus Type-1
Protease by the Gag-Pol Transframe Protein*
,
,
,
¶
Institut für Medizinische
Mikrobiologie und Hygiene,
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
1 ribosomal frameshift at the NC-p1
junction, occurring with a frequency of about 5% of all translational
events (3, 4). The 160-kDa Gag-Pol polyprotein therefore consists
of the gag products MA, CA, p2, and NC, followed by the
pol-encoded transframe protein p6* and the viral enzymes
protease (PR), reverse transcriptase, and integrase.
-sheet formed by the interdigitation of the amino- and
carboxyl-terminal
-strands of each monomer (14).
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EXPERIMENTAL PROCEDURES
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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RESULTS
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

View larger version (20K):
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Fig. 1.
Dixon plot showing inhibition of mature HIV-1
PR activity by p6*. The ability of recombinant p6* (
) and p6
(
) proteins to inhibit the activity of mature HIV-1 PR was assayed
at a substrate concentration of 25 µM as described under
"Experimental Procedures." The data shown are representative of two
independent experiments performed in triplicates with different p6* and
p6 preparations.
1 (Fig.
2A). Analysis of the
preincubation mixture by Western blot showed that the loss of activity
after 60 min does not correlate with the appearance of truncated forms
of the PR (Fig. 2A, top). Due to the slow dimer
dissociation under our experimental conditions, it seems unlikely that
p6* has bound to PR monomers and prevented their dimerization.

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Scheme 1.

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Fig. 2.
Analysis of the inhibition mechanism.
A, effect of p6* on time-dependent inactivation
of HIV-1 PR due to dimer dissociation during preincubation in assay
buffer. An aliquot of the enzyme stock solution was diluted into the
cuvette containing assay buffer without (white
circle) or with 5 µM p6* (black
circle) or p6 (gray circle) to yield a
final concentration of 22 nM active PR dimer. After
preincubation times of 2, 5, 10, 20, 30, 40, 50, and 60 min at 25 °C,
substrate was added to a final concentration of 25 µM,
and the rate of substrate hydrolysis was followed
spectrophotometrically. The remaining PR activity is represented as a
percentage of non-preincubated PR activity. The curves represent
nonlinear regression fits to an exponential rate equation. The data
shown are representative of two independent experiments performed in
triplicates with different protein preparations. For Western blot
analysis (top), 10-µl aliquots of preincubated PR were
drawn at the indicated times, resolved on a 16.5% protein gel (27),
and transferred to a nitrocellulose membrane. PR was visualized with
polyclonal antiserum ARP413, followed by enhanced chemiluminescence.
The bands representing the intact 11-kDa HIV-1 PR are indicated at
right. B, effect of p6* on cross-linking of PR
subunits. PR was preincubated in the presence or absence of p6 or p6*.
Preincubated samples were treated with DSS or solvent only.
Precipitated proteins were resolved on a 16% protein gel and
transferred to a nitrocellulose membrane. The PR species were
visualized with polyclonal antiserum ARP413, followed by enhanced
chemiluminescence. A representative immunoblot is shown. The bands
representing the 22-kDa PR dimer are indicated at left.
Top, densitometric analyses of three independent
experiments. The relative intensity of the dimer is expressed as a
percentage of total PR (monomer + dimer) immunoreactivity.
C, Lineweaver-Burk plot showing competitive inhibition
of mature HIV-1 PR activity by p6*. HIV-1 PR activity was measured at
the specified substrate concentrations and either 0 (white
circle), 5 (black circle), or 10 µM (gray circle) p6* as described
under "Experimental Procedures." Replot of the slopes
versus p6* concentrations is shown in the inset.
The plots are representative of two independent experiments performed
in triplicates with different p6* preparations.

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Fig. 3.
Effect of mutations on p6*-induced inhibition
of HIV-1 PR activity. Top, schematic representation of
wild-type and mutant p6* proteins with PR cleavage site sequences
designated by shaded, black, and
striped rectangles according their relative
positions along p6*. The ability of the various p6* proteins and the
tetrapeptide Ser-Phe-Asn-Phe-COOH to inhibit the activity of HIV-1 PR
was assayed as described under "Experimental Procedures." PR
activity as a function of inhibitor concentration is shown on the
bottom as a Dixon plot. The data are representative of three
independent experiments performed in triplicates with different p6*
(
), p6*M1 (
), p6*M2 (
), p6*M3 (
), p6*M4 (
), and
Ser-Phe-Asn-Phe-COOH (
) preparations. A, analysis of
cleavage site deletion mutants. Inset, inhibition of mature
HIV-1 PR activity by the carboxyl-terminal tetrapeptide of p6*.
B, analysis of carboxyl-terminal cleavage site
mutants.
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DISCUSSION
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
Asn PR
subunit used in this study may be regarded as the ideal dimerization
inhibitor, since it is, except for the Asp25
Asn
substitution, indistinguishable from the native subunit. However, even
with this perfect dimerization inhibitor, at least 30 min were needed
to obtain full PR inhibition at pH 5.5 and 30 °C. In addition to the
carboxyl-terminal hexapeptide, the amino-terminal octapeptide
Phe-Leu-Arg-Glu-Asp-Leu-Ala-Phe of p6* has also been shown to act as
inhibitor of mature HIV-1 PR activity (Ki = 98 ± 10 µM) (39). However, in contrast to the carboxyl
terminus of p6*, PR inhibition by its amino terminus is dependent on a protonated form of a group with a pKa of 3.8. Thus,
it is conceivable that both the amino- and carboxyl-terminal region of
p6* may play a pH-dependent role in regulating HIV-1 PR activity.
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ACKNOWLEDGEMENTS
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FOOTNOTES
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ABBREVIATIONS
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REFERENCES
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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