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J Biol Chem, Vol. 274, Issue 31, 21932-21936, July 30, 1999
From BID is a member of the BH3-only subgroup of Bcl-2
family proteins that displays pro-apoptotic activity. The
NH2-terminal region of BID contains a caspase-8
(Casp-8) cleavage site and the cleaved form of BID translocates to
mitochondrial membranes where it is a potent inducer of cytochrome
c release. Secondary structure and fold predictions suggest
that BID has a high degree of Bcl-2 protein family members play an important role in governing a
cell's decision to heed or disregard signals to enter pathways for
programmed cell death and apoptosis. The Bcl-2 protein family can be
divided into two camps: pro- and anti-apoptotic, with proteins such as
Bcl-2 and Bcl-XL acting to prevent cell death and proteins such as Bax and Bak encouraging cell death. The sequences of these proteins share pockets of similarity in regions designated
BH1-4.1
The three-dimensional structure of Bcl-XL shows the protein
to be a bundle of seven The amino acid sequences of one branch of the Bcl-2 family diverge
substantially from Bcl-XL, Bcl-2, Bax, and many other Bcl-2 family proteins, sharing similarity only within the ~16 amino acid
BH3 domain. This "BH3-only" subset includes BID, BAD, BIK, and HRK
(reviewed in Ref. 6), which are all pro-apoptotic proteins. These
proteins are presently thought to lack intrinsic activity, acting as
trans-dominant inhibitors by use of their BH3 domains to interact with
the BH3-binding pockets of anti-apoptotic proteins (7). In this view,
BH3 proteins may play a passive role in apoptosis promotion by
displacing anti-apoptotic proteins such as Bcl-XL from
interactions with Bax, Apaf-1, or other pro-apoptotic proteins, freeing
them to exert pro-apoptotic activities.
Mitochondria also play significant roles in apoptosis (reviewed in Ref.
8). Bcl-2 family members possessing a hydrophobic COOH-terminal
membrane anchoring domain (e.g. Bcl-2, Bcl-XL)
typically localize to mitochondrial membranes (reviewed in Refs. 6 and 8), although some members such as Bax can be transient mitochondrial residents that translocate from the cytosol to the mitochondria in
response to several death signals (9, 10). Escape of cytochrome c (Cyt c) from mitochondria represents a critical
event in initiating the caspase activation cascade, through its
interaction with Apaf-1, which induces processing and activation of the
cell death protease caspase-9 (Casp-9) (11, 12). The portal through
which Cyt c passes into the cytoplasm is unknown, although
Bax and the mitochondrial permeability pore complex appear to play
important roles in Cyt c release (13, 14).
In response to Fas receptor ligation, pro-Casp-8 is recruited to the
death-receptor complex where local aggregation allows Casp-8 processing
(15). This activation is followed by Cyt c release and
subsequent activation of downstream caspases such as Casp-3, -6, and -7 (16). Recently, the participation of BID in Cyt c release
from mitochondria in Fas-stimulated cells was demonstrated (17,
18).
BID is a 195-residue, 22-kDa protein that lacks the hydrophobic
COOH-terminal domain often found in Bcl-2 family proteins and which has
a predominantly cytosolic localization (19). BID interacts with Bcl-2,
Bcl-XL, and Bax via its BH3 domain and can counteract the
cytoprotective effects of Bcl-2 and Bcl-XL (19). The murine
BID amino acid sequence contains a putative Casp-8 cleavage site
(57-L-Q-T-D-G-61) within its NH2
terminus and BID is indeed cleaved between residues 59 and 60 by Casp-8
both in vivo and in vitro (17, 18). The intact
BID protein is found in the cytoplasm, but upon cleavage, truncated BID
translocates to mitochondria (17, 18). In vitro, truncated,
but not intact BID, is a potent inducer of Cyt c release
from isolated mitochondria, prompting release of more than 80% of
total Cyt c after treatment with nanogram amounts of
Casp-8-cleaved BID (18). Thus, BID serves as a linker between the Fas
receptor at the cytoplasmic membrane and the mitochondrial cell death
machinery. The conversion from the cytosolic, soluble intact BID to the
mitochondrial membrane-associated NH2-terminal truncated
BID and subsequent Cyt c release implies that truncated BID
may play a role in priming the mitochondrial membrane to become more
per- meable, permitting Cyt c to escape. To explore this
possibility, the membrane activity of both wild-type and truncated
recombinant murine BID was examined using liposome and planar bilayer assays.
Plasmid Preparation--
A plasmid encoding a GST-BID fusion
protein was constructed by liberating a
EcoRI-XhoI cDNA encoding murine BID-(1-195)
and subcloning into pGEX4Ti (Amersham Pharmacia Biotech). BID Protein Purification--
Wild-type BID and BID Circular Dichroism--
Circular dichroism (CD) measurements
were carried out on an AVIV D60 spectropolarimeter equipped with a
temperature control accessory and calibrated with d-10-camphor
sulfonate. Measurements were taken using a 1-mm path length. All
spectra were recorded in 1.0-nm wavelength increments with a 1-s time
constant and a full-scale sensitivity of 10 millidegrees. Each spectrum
is the average of three scans corrected for background solvent effects by subtraction of the appropriate buffer blank. BID and BID Liposome Preparation and Cl Molecular Modeling--
Structure prediction for BID was
attempted using a threading approach (21). The algorithm produced
several possible predictions with similar significance scores. Out of
the first four predictions, two were disqualified, because their
sequence alignments failed to produce a three-dimensional model. The
remaining predictions out of the first four were: apolipophorin III
(PDB code 1aep, a four-helical bundle) and Bcl-XL (1maz).
The 1aep prediction was discarded because removal of the
NH2-terminal fragment up to Asp-59 (which is cleaved by
caspase to produce an active protein) does not result in change of
exposure of the BH3 domain in the model. The 1maz prediction was more
consistent with experimental data, because removal of the
NH2-terminal fragment from the model results in a
substantial change of BH3 domain accessible surface. Two models of BID,
either the full-length or Planar Bilayer Preparation and Single Channel
Recording--
Phospholipid bilayer membranes were formed as described
previously (23). Solvent containing membranes were formed by placing a
bubble of lipid onto the end of the Teflon tube approximately 300 microns in diameter. The design of the chamber allowed rapid introduction of solution into immediate proximity with the membrane in
a volume of only 50 microliters. Agar salt bridges were used to connect
the electrodes to the solutions and voltage clamp conditions were
employed in all experiments. Lipids were purchased from Avanti Polar
Lipids (Birmingham, AL) and stored at To explore the possibility that BID interacts with membranes,
recombinant BID and BID To assess whether the truncated form of BID possesses a significantly
different structure, circular dichroism (CD) spectra were obtained for
each protein. The far UV-CD spectrum (185-250 nm) is dominated by the
amide bond absorption and is highly sensitive to the presence of
ordered secondary structure. The far-UV spectrum for both wild-type and
truncated forms of BID display minima at ~202 and 222 nm and are
characteristic of proteins having at least 50-60%
Ion Channel Activity of the BH3 Only Bcl-2 Family Member,
BID*
§¶,
**,
owski

,

,
¶¶
The Burnham Institute, La Jolla, California
92307 and the
Neuropsychiatric Institute and West Los Angeles
Department of Veterans Affairs Medical Center School of Medicine,
University of California, Los Angeles, California 90024
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MATERIALS AND METHODS
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-helical content and structural
similarity to Bcl-XL, which itself is highly similar to
bacterial pore-forming toxins. Moreover, circular dichroism analysis
confirmed a high
-helical content of BID. Amino-terminal truncated
BID
1-55, mimicking the Casp-8-cleaved molecule, formed channels in
planar bilayers at neutral pH and in liposomes at acidic pH. In
contrast, full-length BID displayed channel activity only at
nonphysiological pH 4.0 (but not at neutral pH) in planar bilayers and
failed to form channels in liposomes even under acidic conditions. On a
single channel level, BID
1-55 channels were voltage-gated and
exhibited multiconductance behavior at neutral pH. When full-length BID
was cleaved by Casp-8, it too demonstrated channel activity similar to
that seen with BID
1-55. Thus, BID appears to share structural and
functional similarity with other Bcl-2 family proteins known to have
channel-forming activity, but its activity exhibits a novel form of
activation: proteolytic cleavage.
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INTRODUCTION
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ABSTRACT
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RESULTS AND DISCUSSION
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-helices with two central predominantly hydrophobic helices forming the core of the molecule. This structure is
reminiscent of pore-forming bacterial toxins diphtheria and colicins A,
E1, and Ia, suggesting that Bcl-XL may have channel-forming potential (1). Indeed, in vitro channel-forming activity was demonstrated for Bcl-XL, Bcl-2, and Bax (2, 3, 4).
Predicted structures for Bcl-2 and Bax can be modeled using the
coordinates of Bcl-XL, suggesting that these proteins share
similar structural features (5).
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MATERIALS AND METHODS
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RESULTS AND DISCUSSION
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1-55 was constructed after introduction of an EcoRI site between
the codons for residues 55 and 56 using forward
(5'-CTCGAAGACGAATTCCAGACAGAC-3'; altered base
pairs underlined) and reverse (5'-CCGGGAGCTGCATGTGTCAGAGG-3') primers
in a polymerase chain reaction reaction to amplify a ~0.5-kilobase pair fragment flanked by EcoRI-XhoI sites.
Residue 55, rather than 59, was chosen to minimize the number of base
pair changes necessary to introduce the EcoRI site. The
fragment was then inserted into pGEX4Ti following EcoRI and
XhoI digestion. The presence of the deletion was confirmed
by DNA sequencing.
1-55 were
produced as GST fusion proteins from pGEX vectors using
Escherichia coli BL21 (DE3) as the host strain. The
purification method is identical for each protein. An overnight culture
(5 ml) was used to inoculate 1 liter of LB medium that was incubated at
37 °C until an A600 of 0.8-1.0 was achieved.
The cells were induced with 1 mM
isopropyl-
-D-thiogalactopyranoside and incubated at
37 °C for an additional 4 h before harvesting by
centrifugation. The cells were resuspended in 40 ml of lysis buffer (50 mM Tris-HCl, pH 8.0, 150 mM NaCl, 5 mM EDTA, 1% Triton X-100, 0.5 mg/ml lysozyme, Complete
protease inhibitor tablet (Roche Molecular Biochemicals)) and incubated
on ice for 30 min before brief sonication to reduce viscosity. The
resulting lysate was centrifuged at (8000 × g) for 15 min to pellet cellular debris. Three ml GST-Sepharose beads (Amersham
Pharmacia Biotech) were added to the supernatant and incubated at
4 °C with gentle rotation for 3 h. The beads were washed twice
with 20 mM Tris-HCl, pH 8.0, 100 mM NaCl, 0.1%
Tween 20, 1 mM EDTA followed by two washings with the same
buffer lacking Tween 20. The beads were resuspended in 10 ml of the
final wash buffer and incubated with 10 units thrombin (Roche Molecular
Biochemicals) for 90 min at 4 °C. The supernatant was collected in
fractions from the beads and passed over a benzamidine-agarose column
(Sigma) to inactivate thrombin. For liposome and circular dichroism
assays, the protein was dialyzed into 20 mM potassium
phosphate buffer, pH 7.0. Purified proteins were characterized by
SDS-polyacrylamide gel electrophoresis on 15% high Tris gels (20),
followed by Coomassie staining. Concentrations were determined either
by A280 using
= 0.5 and 0.1 for BID
wild-type and BID
1-55, respectively, or by Bradford assay
(Bio-Rad).
1-55 in
either 20 mM potassium phosphate, pH 7.0, or 20 mM sodium acetate, pH 4.0, were diluted to a concentration
of 0.3 and 0.1 mg/ml, respectively. Spectra were scanned in the far-UV
from 250 to 190 nm. A value of 110 for the mean residue molecular
weight was used in the calculation of the mean residue ellipticity
(
).
Efflux
Measurements--
Large unilamellar vesicles composed of 70%
dioleoylphosphatidylcholine (DOPC) and 30%
dioleoylphosphatidylglycerol (DOPG) were produced as described
previously (4). The liposomes were diluted to a final concentration of
0.05 mg/ml in 10 mM dimethyl glutaric acid, 100 mM choline nitrate, 2 mM
Ca(NO3)2 at either pH 4.0 or pH 6.0. Valinomycin was added to a final concentration of 15 nM to
generate an inside-negative potential. BID wild-type or BID
1-55 was
added at the indicated concentrations, and residual Cl
was released following addition of Triton X-100 (0.1% v:v). The total
amount of Cl
released was compared against a calibration
curve produced by successive additions of KCl. Electrode assembly is as
described previously (4).
1-59 based on the Bcl-XL
structure were then built using the MODELLER program (22).
70 °C. In some cases, azolectin was used for membranes to increase sensitivity but this was
unnecessary for BID (
1-55). Current was recorded with an Axopatch
amplifier (Axon Instruments, Sunnyvale, CA) and stored on videotape for
later playback and analysis. Membrane capacitance and resistance were
monitored in order to assure the formation of reproducible membranes.
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1-55 were expressed as GST fusion proteins in E. coli. BID
1-55 represents a recombinant mimic of
the ~15-kDa Casp-8 cleavage product of BID and was used to avoid any
ambiguities associated with incomplete digestion of full-length BID or
the possible confounding presence of Casp-8. The BID proteins were liberated from the GST moiety by thrombin digestion and determined to
be >90% purity, as determined by SDS-polyacrylamide gel
electrophoresis analysis with Coomassie staining (Fig.
1). The faintness of the BID
1-55 band
may be attributable to its lack of aromatic amino acids (one tyrosine
and no tryptophans) required for Coomassie Blue binding (24).

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Fig. 1.
Analysis of recombinant BID and
BID
1-55 proteins. Wild-type BID
(left) and truncated BID
1-55 (right) were
purified using GST-Sepharose affinity chromatography. Molecular mass
markers (kilodaltons) are indicated. Although similar amounts of each
protein were loaded, the low intensity of the BID
1-55 may be due to
its low aromatic amino acid content.
-helical
secondary structure (25) (Fig. 2). Little
change was seen in the shape or amplitude of the far-UV spectrum
between the wild-type and BID
1-55, indicating that the
-helical
nature of these two proteins remains intact despite the loss of the
first 55 residues (Fig. 2). These CD data also demonstrate that BID and
BID
1-55 possess a high
-helical content. The high
-helical content of BID and BID
1-55 is reminiscent of the channel-forming Bcl-XL, Bcl-2, and Bax proteins as well as structurally
related bacterial toxins such as the pore-forming colicins and
diphtheria toxin.

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Fig. 2.
Far-UV circular dichroism spectra of BID and
BID
1-55. BID (
, pH 7.0; +, pH 4.0)
and truncated BID
1-55 (×) were dialyzed into 20 mM
potassium phosphate, pH 7.0, or 20 mM sodium acetate, pH
4.0, and the spectra scanned from 250 to 190 nm. Protein concentrations
were 14 and 10 µM for wild-type and truncated BID,
respectively. Spectra represent the average of three scans (5 s
averaging time) corrected for background intensity by subtraction of
the appropriate buffer blank.
When BID was added to KCl-loaded liposomes composed of 70% neutral
(DOPC) and 30% acidic (DOPG), no chloride efflux could be observed,
either at pH 4.0 or 7.0 (Fig. 3,
curve c, and data not shown). In contrast, when BID
1-55
was added in nanogram amounts to similar vesicles, the protein induced
>50% release of encapsulated chloride at pH 4.0 (Fig. 3, curve
a), but no ion release was detected at pH 7.0 (Fig. 3, curve
d). The ion release induced by truncated BID displayed a partial
dependence of an outside-positive voltage, as the amount of ion
released in the absence of the K+-specific ionophore
valinomycin was reduced (Fig. 3, curve b). No
BID
1-55-induced ion release was detected at pH 4.0 when the vesicles lacked acidic lipids (100% DOPC) (not shown). The behavior of
BID
1-55 closely resembles that observed previously for Bcl-2 and
Bcl-XL in that the activity detected in this assay is pH
and voltage-dependent and requires acidic lipids (2, 3).
The chloride efflux assay detects channel activity on a macroscopic level and requires that the bulk of the protein molecules are participating in channel formation, excluding the possibility that a
small subgroup of molecules are responsible for ion release.
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To characterize the behavior of wild-type and truncated BID at a
microscopic level, experiments were performed using planar bilayer
membranes. This technique allows channels to be monitored at the single
channel level and yields more specific information on pH, voltage
dependence, and ion conductance. When wild-type BID was added to planar
bilayers at pH 7.3 in the presence of a +50 mV membrane potential, no
channel activity was observed (Fig.
4A). Yet when the chamber was
flushed out and a pH 4.0 buffer solution was added, channel activity
began immediately (Fig. 4A, expanded region), suggesting
that the wild-type BID is able to associate with the membrane, but an
acidic pH is necessary to achieve membrane insertion and channel
activity. This channel activity does not appear to require that the
protein undergo significant changes in secondary structure as the
far-UV CD spectrum of wild-type BID at pH 4.0 is indistinguishable from
that at pH 7.0 (Fig. 2). However, the lack of a clear quantal size for
these channels may reflect rapid transitions among multiple
conformations of molecules undergoing tertiary structure changes as
they interact with the membrane.
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Since BID is a Casp-8 target in vivo, we explored whether
Casp-8-cleaved BID also displays channel activity similar to the mutant
mimic BID
1-55. Incubation of BID with Casp-8 at a 10:1 (mole:mole)
ratio produced a cleaved form of BID (not shown) that exhibited channel
activity within 1 min after addition of the cleavage mixture to planar
bilayers at pH 7 (Fig. 4B). Similar to Casp-8-cleaved BID,
BID
1-55 also demonstrated channel activity at neutral pH (Fig.
4C). Our ability to detect channels formed by BID
1-55
at neutral pH in planar bilayers but not in liposome-based ion efflux
assays presumably reflects the greater sensitivity of the former
method. Similar results were also obtained for Bcl-2 and
Bcl-XL (2, 3).
We used the BID
1-55 protein as a recombinant mimic of Casp8-cleaved
BID to further characterize BID channel activity in planar bilayers
(Fig. 5). BID
1-55 displayed a
membrane potential dependence that was similar to that observed for the
pore-forming colicins (26) and to that observed for truncated BID in
liposomes, in that the channel was open when a positive voltage was
applied on the side to which BID was added but converted to a
nonconductive state when the voltage was reversed to a negative
voltage. Several BID
1-55 single channel conductances with
clear quantal sizes were discerned in these experiments (Fig. 5),
including smaller conductances of 7.4 pS and larger conductances
of 40 and 100 pS in 150 mM KCl (Fig. 5).
|
Although the sequence similarity between BID and Bcl-XL and
other family members is confined to the BH3 domain, the high
-helical content of the protein and its ability to form ion channels
in vitro prompted the consideration that BID may share
structural similarity with Bcl-XL or other pore-forming
proteins. Accordingly, structure prediction for BID was attempted using
a threading approach (21), revealing extensive predicted structural
similarity with Bcl-XL (Fig.
6). Using the MODELLER program, models
for the full-length and truncated forms of BID were built using the
Bcl-XL coordinates as a guide. The COOH-terminal portion of
both BID and BID
1-55 are predicted to correspond to the last six of
the seven
-helices observed for the Bcl-XL structure.
This includes a centrally located pair of hydrophobic
-helices
previously implicated in pore formation by Bcl-2 and Bax (3, 14) and an
-helix corresponding to the BH3 dimerization domain (Fig. 6). The
NH2-terminal region of full-length BID proximal to the
caspase cleavage site does not model well on the Bcl-XL
structure, which corresponds to the BH4-containing first
-helix in
Bcl-XL. In contrast to BID, attempts to model other
BH3-only proteins on the Bcl-XL coordinates were unsuccessful, including BAD, Blk, Bik, Hrk, and Egl (not shown), thus
suggesting that these members of the Bcl-2 family do not possess
structures similar to Bcl-XL and related pore-forming proteins.
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Two observations related to the effects of cleavage of BID are
predicted by comparisons of the models for full-length and truncated
BID. First, removal of the NH2-terminal segment (1-55) results in a 60 Å2 increase of exposed hydrophobic surface
area of the central pair of helices (
4-
5 in this model), which
are candidate pore-forming regions of the protein. Consequently,
removal of the NH2-terminal region by proteolysis may
promote the association of the cleaved BID protein with membranes.
Second, excising the NH2-terminal segment is predicted to
result in increased accessibility of the BH3 dimerization domain by 90 Å2. Since the hydrophobic surface of BH3 domains is known
to be involved in dimerization among Bcl-2 family proteins (27), this suggests that cleavage of BID may also promote its heterodimerization with Bcl-2 family members (Fig. 6).
Taken together, the findings presented here argue that while BID shares very limited amino acid sequence similarity with Bcl-XL and other documented pore-forming members of the Bcl-2 protein family, BID may nevertheless be a structurally similar protein that also shares pore-forming capability. Recent determination of the three-dimensional structure of BID, which was reported while this work was under review (28, 29), supports this view. The pore-forming activity of BID is unique in that it occurs primarily following proteolytic cleavage. Although full-length BID did display some channel activity on planar bilayers at acidic pH, this may reflect that the NH2 terminus has become "unwrapped" from the protein at low pH in the same manner as previously documented for colicins (26). Thus, low pH may promote BID conformations that allow some of the uncleaved molecules to insert into membranes under conditions of nonphysiological pH. However, in vivo, where pH essentially never drops below pH 6.0, the NH2-terminal domain of BID presumably requires physical removal by Casp-8 cleavage, although other mechanisms involving interactions with other proteins cannot be excluded.
Previously, BH3-only proteins have been viewed as trans-dominant
inhibitors that relied exclusively on dimerization with other Bcl-2
family proteins to exert effects on cell life and death. The results
presented here suggest that some BH3-only proteins may have intrinsic
activities as membrane-integrating or channel proteins, necessitating
re-evaluation of the role of this sub-branch of the Bcl-2 family.
| |
ACKNOWLEDGEMENTS |
|---|
We thank G. Salvesen for the gift of caspase-8, Z. Xie for advice on BID preparation, and E. Smith for manuscript preparation.
| |
FOOTNOTES |
|---|
* The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
§ These two individuals contributed equally to the work described herein.
¶ Supported by a Postdoctoral Fellowship DAMD-17-981-8167 from United States Army Medical Research and Material Command.
** Present address: Institute of Physiology and Biophysics, Uzbek Academy of Science Nyazov St. 1Tashkent, Uzbekistan 700095.

Both authors supported by National Institutes of Health
GM-60049.
§§ Supported by National Institutes of Health Grant MH 01174 and by grants from the UCLA AIDS Institute, the UCLA Center on Aging, and the Stein-Oppenheimer fund.
¶¶ To whom correspondence should be addressed. Tel.: 619-646-3140; Fax: 619-646-3194; E-mail: jreed@burnham-inst.org.
| |
ABBREVIATIONS |
|---|
The abbreviations used are: BH, Bcl-2 homology domain; DOPC, 1,2-dioleoylphosphatidylcholine; DOPG, 1,2-dioleoylphosphatidylglycerol; GST, glutathione S-transferase; S, siemens; Casp, caspase; Cyt c, cytochrome c; POPE, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylethanolamine; POPG, 1-pamitoyl-2-oleoyl-sn-glycero-3-rac-glycerol.
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