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J Biol Chem, Vol. 274, Issue 33, 22915-22918, August 13, 1999
From the A cDNA encoding a novel galactosyltransferase
was identified based on BLAST analysis of expressed sequence tags, and
the cDNA clones were isolated from a human melanoma line library.
The new cDNA sequence encoded a type II membrane protein with 327 amino acid sequence and showed 38% homology to the
Caenorhabditis elegans sqv-3 gene involved in the vulval
invagination and oocyte development. Extracts from L cells transfected
with the galactosyltransferase cDNA in an expression vector and a
fusion protein with protein A exhibited marked galactosyltransferase
activity specific for p-nitrophenyl- Proteoglycans are polyanionic molecules consisting of
different core proteins and different types, numbers, and length of glycosaminoglycans (GAGs)1
and are present not only on the cell surface but also in the extracellular matrices of various tissues (1). A wide variety of
proteoglycans containing characteristic sulfated GAG chains are
generated in a cell type-specific manner, and their strictly regulated
expression patterns have suggested their roles in the regulation of
cell proliferation/differentiation (2), tissue development and
organogenesis (3), and infections (4).
The biosynthesis of the sulfated GAGs on proteoglycans is initiated by
the addition of Xyl to Ser residues in the core proteins; and then the
addition of two Gal residues and a GlcA residue subsequently takes
place (1). Alternatively, the addition of GlcNAc or GalNAc residues to
the common linkage structure leads to the formation of heparin/heparan
sulfate or that of chondroitin sulfate/dermatan sulfate, respectively.
The sequential transfer of individual sugars has been considered to be
catalyzed by specific glycosyltransferases, and some
glycosyltransferase genes responsible for individual steps have
recently been isolated, i.e. glucuronyltransferase I (5, 6),
GlcA/GlcNAc transferases to elongate the heparan sulfate chain (7), and
a GalNAc/GlcNAc transferase to initiate this process (8).
In the present study, we isolated cDNA clones encoding human
galactosyltransferase I (XGalT-1), which is involved in the
biosynthesis of the common carbohydrate-protein linkage structure
GlcA Materials--
UDP-Gal,
p-nitrophenyl- EST Data Base Search--
Data base searches were
performed with the coding sequence of the C. elegans sqv-3
gene (GenBankTM accession no. AJ005867) using tBLASTn
algorithms against the EST data base at the NCBI. Four human EST clones
(GenBankTM accession nos. AI040029, AA100869, AA442547, and
T82170) were found, and overlapping sequences (nucleotides 644-1126)
were obtained by reverse transcription PCR using total RNA from human colon cancer cell line Lovo as a template.
Screening of cDNA Library--
The 5' RACE product
(nucleotides 29-687) prepared using the 5' RACE kit (Life
Technologies, Inc.) was 32P-labeled with a MegaprimeTM DNA
labeling system (Amersham Pharmacia Biotech) and used to screen the
SK-MEL-37 cDNA library. Approximately, 4 × 105
recombinant clones were screened by colony hybridization. The nucleotide sequence was determined by the dideoxy termination method
using an ABI PRISMTM 310 genetic analyzer (Applied
Biosystems). The newly cloned gene was designated XGalT-1
for the reasons described below.
Construction of Expression Vectors--
A cDNA fragment
encoding the open reading frame of XGalT-1 was prepared by
PCR using a 5' primer containing an XhoI site, 5'-CTCGAGACGATGTTCCCCTCGCGGAGG-3' (nucleotides 38-58), and
a 3' primer containing a SpeI site,
5'-TCTAGAAGCTCAGCTGAATGTGCACCA-3' (nucleotides 1027-1007),
and the cloned cDNA as a template. The PCR product was inserted
into the XhoI and SpeI sites of the
pMIKneo vector (provided by Dr. K. Maruyama, Tokyo Medical
and Dental University). The truncated form of XGalT-1,
lacking 53 amino acids from the amino terminus, was prepared by PCR
using a 5' primer containing an EcoRI site,
5'-CAGCTCGAATTCTCTGGGGACGTGGCCCGG-3' (nucleotides
200-217), and a 3' primer containing an XhoI site, 5'-TGTCCACTCGAGTCAGCTGAATGTGCACCA-3' (nucleotides
1007-1024) and the cloned cDNA fragment as a template. The product
was subcloned into the EcoRI and XhoI sites of
the pCD-SA vector XGalT-1-protA.
Cell Culture--
Mouse fibroblast L cells and CHO-K1
cells were grown in Dulbecco's modified Eagle's minimum essential
medium supplemented with 7.5% FCS at 37 °C in a 5% CO2
atmosphere. CHO mutant pgsB-761 (10) was obtained from the American
Type Culture Collection and grown in F-12K medium (Life Technologies,
Inc.) supplemented with 10% FCS.
Preparation of Membrane Fraction--
L cells were transiently
transfected with an expression plasmid (4 µg) by the DEAE-dextran
method (11). After 48 h of culture, the cells were harvested, and
the membrane fraction was prepared as described (12).
Preparation of Soluble Forms of XGalT-1--
L cells (10-cm
dish) were transfected with pCDSA-XGalT-1 (4 µg) by the
DEAE-dextran method, and soluble forms of XGalT-1 were obtained as
described (13). To prepare the sample for NMR spectroscopic analysis,
the soluble enzyme was further purified using IgG-Sepharose (Amersham
Pharmacia Biotech). The beads-enzyme complex was washed with and then
resuspended in 100 mM MES buffer, pH 6.0.
Galactosyltransferase Assay--
The galactosyltransferase
activity was determined according to Lugemwa et al. (14)
with modification. The assay mixture containing 1 µl of
Me2SO, 15 mM MnCl2, 50 mM KCl, 1% Triton X-100, 100 mM MES buffer, pH
6.0, 0.6 mM UDP-Gal, 5000 dpm/µl
UDP-[14C]Gal (NEN Life Science Products), and 1 µg of
the enzyme and substrates in a total volume of 25 µl. After
incubation at 37 °C for 30 min, the reaction mixture was applied
onto a Sep-Pak C18 cartridge (Waters), and the product was
eluted with 5 ml of methanol.
Purification and Identification of the Enzyme Product--
The
enzyme reaction was performed in a mixture consisting of 50 µl of the
enzyme-bound IgG-Sepharose, 2.7 mg of
p-Nph- Flow Cytometry Analysis--
CHO pgsB-761 cells were transfected
with 10 µg of plasmid DNA using LipofectAMINETM (Life Technologies,
Inc.). Three days later, cells were analyzed by flow cytometry with mAb
HepSS-1 at a dilution of 1:25 (40 µg/ml) as described (13) on a
FACSCalibur with Cell QuestTM version 3.1f software (Becton Dickinson).
[35S]Sulfate Labeling and Enzyme Digestion of GAGs
Synthesized in PgsB-761 Cells--
PgsB-761 cells were transfected
with XGalT-1, incubated for 96 h, and then labeled with
Na2[35S]SO4 (100 µCi/ml, NEN
Life Science Products) for 24 h. The labeled GAGs were isolated by
protease digestion and DEAE-Sephacel chromatography (Amersham Pharmacia
Biotech) according to Esko et al. (15). The isolated GAGs
were treated by chondroitinase ABC (CSase) or heparitinase I and II and
heparinase (HSase) and separated as described previously (16).
Northern Blotting--
Human Multiple Tissue Northern
blot® was purchased from CLONTECH Laboratories and
was probed with a gel-purified [ Molecular Cloning of Human XGalT-1 Gene--
C. elegans
sqv-3 was similar in its amino acid sequence to the
Galactosyltransferase Activity of the Newly Cloned Enzyme--
To
analyze the galactosyltransferase activity of the human
sqv-3 ortholog, the expression vector of the cloned
cDNA, pMIKneo-XGalT-1, was transfected into L
cells, and their extracts were used for galactosyltransferase assay
using a variety of acceptor substrates (Table
I). Significant activity was observed
with p-Nph- Characterization of the Enzyme Product--
To identify the enzyme
reaction products, p-Nph- Structural Determination of the Enzyme Product--
To
characterize the structure of the reaction product, FAB-MS was
performed and revealed that the molecular weight of the product is 433 from signals at 434 m/z (M + 1) and 456 m/z (M + Na+), which was attributable
to galactosyl products of the starting Xyl Restoration of GAG Synthesis by the Cloned XGalT-1 in a
GAG-deficient Mutant Cell--
To confirm that this enzyme is involved
in the biosynthesis of GAGs in vivo, CHO mutant pgsB-761
(galactosyltransferase I-deficient) cells were transiently transfected
with pMIKneo-XGalT-1. As shown in Fig.
3A, about 50% of the
transfected cells were stained with mAb HeppSS-1, whereas the
mock-transfected cells were negative, indicating that the cloned
cDNA actually encodes galactosyltransferase I. This result was also
confirmed by 35S-labeled GAGs with CSase or HSase digestion
(Fig. 3B).
Expression of the XGalT-1 Gene--
Northern blotting with
cDNA as a probe revealed that the XGalT-1 gene was
expressed in all human tissues examined (including the heart,
brain, placenta, lung, liver, skeletal muscle, kidney, and
pancreas), and 1.8-kilobase pair transcripts were
detected (data not shown).
Newly cloned XGalT-1 was identified as a possible
member of the XGalT-1 was studied by Rodén's group (26, 27) and was further
characterized in the study of CHO mutants defective in galactosyltransferase I (10) and in the study of clinical cases (29).
The substrate specificities and storage stability were similar to the
characters of the XGalT-1 enzyme analyzed in this study. The
Km value for p-Nph- Northern blotting showed a ubiquitous expression pattern, indicating
the universal importance of the gene product. Since the activating and
inhibitory effects of proteoglycans on cell proliferation have been
elucidated (30, 31), important roles of GAGs on proteoglycans have been
increasingly recognized. The phenotypes of C. elegans
defective of sqv-3 gene strongly suggested the critical roles of its homolog in the morphogenesis and development of mammalian tissues. Thus, the linkage between the genetic study of C. elegans and mammalian glycobiology research would promote further
understanding of the biological significance of GAGs on proteoglycans.
We thank Dr. J. D. Esko
(University of California at San Diego) for kindly providing CHO mutant
pgsB-761. We also thank Dr. S. Tsuji (Riken Research Institute) for
providing an expression vector pCDSA for a protein A fusion enzyme.
*
This work was supported by grants-in-aid for scientific
research (10470029), for priority areas (10178104), and for Center of
Excellence research from the Ministry of Education, Science, Sports and
Culture of Japan.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) AB028600.
The abbreviations used are:
GAG, glycosaminoglycan;
CHO, Chinese hamster ovary;
mAb, monoclonal
antibody;
PCR, polymerase chain reaction;
FCS, fetal calf serum;
COMMUNICATION
Human Homolog of Caenorhabditis elegans sqv-3
Gene Is Galactosyltransferase I Involved in the Biosynthesis of the
Glycosaminoglycan-Protein Linkage Region of Proteoglycans*
,
Department of Biochemistry II,
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-D-xylopyranoside. Moreover,
transfection with the cloned cDNA restored glycosaminoglycan
synthesis of galactosyltransferase I-deficient Chinese hamster ovary
mutant pgsB-761 cells. Analysis of the enzyme product by
-galactosidase digestion, mass spectroscopy, and NMR spectroscopy
revealed that the reaction product was formed via
-1,4 linkage,
indicating that the enzyme is galactosyltransferase I
(UDP-galactose:O-
-D-xylosylprotein
4-
-D-galactosyltransferase, EC 2.4.1.133) involved
in the synthesis of the glycosaminoglycan-protein linkage region of proteoglycans.
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INTRODUCTION
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
1,3Gal
1,3Gal
1,4Xyl
1-O-Ser (1), based on the
BLAST analysis of expressed sequence tags (EST) using the cDNA
sequence of the Caenorhabditis elegans sqv-3 gene (9). We
demonstrate here the substrate specificities of the cloned cDNA
product and the restoration of GAG expression on the mutant CHO cells
deficient in galactosyltransferase I after the introduction of the
cloned cDNA. These results, as well as the structure analyses of
the enzyme product, indicated that the cloned gene encodes human
galactosyltransferase I.
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EXPERIMENTAL PROCEDURES
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-D-xylopyranoside
(p-Nph-
-D-Xyl),
p-nitrophenyl-
-D-galactopyranoside
(p-Nph-
-D-Gal),
p-nitrophenyl-N-acetyl-
-D-galactosaminide (p-Nph-
-D-GalNAc),
p-nitrophenyl-N-acetyl-
-D-glucosaminide
(p-Nph-
-D-GlcNAc), and
p-nitrophenyl-
-D-xylopyranoside
(p-Nph-
-D-Xyl) were purchased from Sigma.
[
-32P]dCTP was from ICN (Costa Mesa, CA). Heparitinase
I and II, heparinase, chondroitinase ABC, and the monoclonal antibody
(mAb) for heparan sulfate (HepSS-1) were purchased from Seikagaku Corp
(Tokyo, Japan).
-Galactosidase Digestion--
One µg of
[14C]Gal
1-4Xyl
1-p-Nph formed using
XGalT-1-protA was dissolved in 200 µl of solution containing 50 mM Tris-HCl, pH 7.3, 50 mM NaCl, 20 µg of
-galactosidase from Escherichia coli (Roche Molecular
Biochemicals) and incubated for 7 h at 37 °C. One µg of the
labeled product was also digested with 20 milliunits of diplococcal
-galactosidase (Roche Molecular Biochemicals) for 23 h at
37 °C in a total volume of 100 µl of 50 mM sodium citrate buffer, pH 6.0, containing 100 mM NaCl and 100 µg/ml bovine serum albumin. The digested product was separated on a
Sep-Pak C18 cartridge as described above.
-D-Xyl, 10 µl of Me2SO,
15 mM MnCl2, 50 mM KCl, 1% Triton
X-100, 100 mM MES buffer, pH 6.0, and 75 mM of
UDP-Gal in a final volume of 250 µl. The complete conversion of
p-Nph-
-D-Xyl to a less migrating compound was
confirmed by thin layer chromatography with a solvent system of
ethanol/pyridine/n-butanol/acetate/water (100:10:10:3:30). The reaction product was purified on a Sep-Pak C18
cartridge as described above and then further purified by high
performance liquid chromatography (Jasco 880-PU pumps and MD915
detector) using a DevelosilTM ODS HG-5 column (4.6 × 250 mm, Nomura Chemical). Elution solvents were aqueous 10%
acetonitrile (solvent A) and aqueous 30% acetonitrile (solvent B)
utilizing a gradient at 40 °C. Before NMR analysis, the sample was
dissolved in D2O (99.9 atom % deuterium), dried up
in vacuo, and finally dissolved in 600 µl of
D2O (99.96 atom % deuterium). 1H NMR spectra
(600 MHz) were obtained on a JEOL JMN
-600 in D2O, and
one-dimensional, one-dimensional HOHAHA, and NOE difference spectra and
COSY were recorded as ppm from internal t-BuOH (
1.23) at
25 °C. FAB-MS data were recorded on a JEOL MStation using
m-nitrobenzyl alcohol.
-32P]dCTP-labeled
XGalT-1 cDNA or glyceraldehyde-phosphate dehydrogenase.
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RESULTS
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
4-galactosyltransferase family of human and other vertebrates (9)
and was required for vulval invagination and oocyte development (17).
To find a human homolog, the NCBI Data Bank of EST cDNA clones was
probed with the deduced amino acid sequence of sqv-3 cDNA. Several human partial-length cDNA clones were obtained, and the nucleotide sequence was confirmed by reverse transcription PCR
(nucleotides 644-1126 in Fig.
1A) with total RNA from a
human colon cancer line. Five independent cDNAs homologous to
sqv-3 were obtained from a library, and three of them
contained a whole open reading frame encoding a protein of 327 amino
acids with a molecular mass of 37,405 daltons (Fig. 1A). It
has one potential N-linked glycosylation site. The position
of the AUG start codon was determined according to the Kozak consensus
sequence (18). Hydropathy (19) indicated one prominent hydrophobic
segment of 28 residues in length in the amino-terminal region,
predicting that the protein had the type II transmembrane topology
characteristic of many other glycosyltransferases cloned to date (Fig.
1B). A comparison of the primary structure of the identified
cDNA and human
4GalT-1 (GenBankTM accession no. X14085) (20)
revealed that 82 of the 327 amino acids (25%) were identical (Fig.
1C). Similar results were observed between the newly cloned
gene and other human
4-galactosyltransferases (
4GalT-II, -III,
-IV, -V, and -VI) (21-25). In contrast, this gene shares 38% identity
with the sqv-3 gene, suggesting that this gene represents
its human ortholog (Fig. 1C). These results indicate that
the newly cloned gene product is a novel member of the
4-galactosyltransferase gene family.

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Fig. 1.
Nucleotide and deduced amino acid sequences
of human XGalT-1. A, the nucleotide sequence and
the deduced amino acid sequence. The putative transmembrane domain is
underlined, and a potential N-linked glycosylation site is
boxed. B, the hydropathy calculated by the method of Kyte
and Doolittle (19) with a window of 7 amino acids. C,
multiple amino acid sequence alignment of human XGalT-1, C. elegans sqv-3, and human
4GalT-1 using the ClustalW program.
Identical residues are boxed in black. Gray
boxes indicate conserved residues, and introduced gaps are shown
as hyphens.
-D-Xyl, a primer for
glycosaminoglycan chain formation. No other substrates, including
p-Nph-
-D-GlcNAc, were utilized. Almost no
activity was detected in the extracts from mock-transfected cells. The apparent Km for
p-Nph-
-D-Xyl was 3.4 mM. These
results suggest that the expressed protein is galactosyltransferase I (UDP-galactose:O-
-D-xylosylprotein
4-
-D-galactosyltransferase, EC 2.4.1.133) (26). Similar
results were obtained using a soluble fusion enzyme XGalT-1-protA (data
not shown).
Substrate specificity of XGalT-1
-D-Xyl was labeled
with [14C]Gal using XGalT-1-protA and then subjected to
treatment with E. coli.
-galactosidase (27). More than
99% of the labeled products were digested (data not shown).
Furthermore, the labeled products were also completely cleaved by
diplococcal
-galactosidase, which specifically digests terminal
-1,4-galactosyl linkage (data not shown), indicating that
XGalT-1-protA fusion protein catalyzes the galactose transfer from
UDP-Gal to the acceptor in
-1,4 linkage.
1-p-Nph.
The 1H NMR spectrum showed the p-nitrophenyl
moiety and two glycosyl residues. All of the signals of the sugar
moieties were assigned by 1D-HOHAHA spectra irradiating at each
anomeric signal (
= 4.49 and
= 5.25) and COSY (Fig.
2). The structure of the
p-nitrophenyl-
-xylopyranosyl moiety was confirmed by
comparison with the spectrum of the starting molecule. The coupling
constant of the galactosyl residue (J1,2
= 7.7 Hz, J2,3 = 9.9 Hz,
J3,4 = 3.7 Hz,
J4,5 = 0 Hz) indicated that the
galactoside is a
-pyranoside. The linkage of the galactoside was
determined by NOE difference spectra. By irradiation at Gal H-1, strong
NOEs were observed at Xyl H-4, Gal H-3, and Gal H-5, and also, by
irradiation at Xyl H-4, Gal H-1 was strongly enhanced. Thus, the
structure of the product was identified as
Gal
1-4Xyl
1-p-Nph (28).

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Fig. 2.
1H NMR spectra of the
enzyme product. A, structure of the product formed by
the cloned cDNA product. B, 1H chemical
shifts (ppm) and 1H-1H coupling
constants (Hz) measured for galactosyl and xylosyl residues
are summarized.

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Fig. 3.
Restoration of GAG synthesis in pgsB-761
cells after XGalT-1 transfection. A, flow
cytometry analysis of pgsB-761 cells transfected with the
XGalT-1 cDNA. Cloned cDNA in pMIKneo
(d) or pMIKneo alone (c) was
transfected by LipofectAMINETM into pgsB-761 cells. Expression of
heparan sulfate was analyzed using heparan sulfate-specific mAb HepSS-1
in flow cytometry, as described under "Experimental Procedures."
CHO-K1 cells (a) and pgsB-761 cells (b) were
analyzed as positive and negative controls, respectively.
Thin lines are with mAb, and thick
lines are controls. B, radioactivity of GAG
fractions from CHO-K1, pgsB-761, and pgsB-761 cells transfected with
XGalT-1. These cells were labeled with
[35S]sulfate as described under "Experimental
Procedures." Black bars, untreated; gray bars,
treated with CSase; white bars, treated with HSase. Results
are presented as cpm/µg of protein.
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DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
4-galactosyltransferase family in the BLAST analysis
of EST using the cDNA sequence of C. elegans sqv-3.
sqv-3 was identified as one of the genes possiblly encoding the
components of a conserved glycosylation pathway and required for vulval
invagination (9, 17). Because of the similarity of the amino acid
sequence to the cloned mammalian
4-galactosyltransferases,
sqv-3 seemed to be a
1,4-galactosyltransferase to create
galactose
1,4-N-acetylglucosamine linkage (9). The
predicted amino acid sequence of the new gene had a higher homology to
sqv-3 than to other mammalian
4-galactosyltransferases, suggesting that the gene encodes a
4-galactosyltransferase distinct from known
4-galactosyltransferases involved in the synthesis of
Gal
1,4GlcNAc (or Glc) structures. As expected, the substrate specificity analysis revealed that the new gene encodes XGalT-1, involved in the biosynthesis of the GAG-protein linkage region of proteoglycans.
-D-Xyl
reported (29) was also in good agreement with our results. All of these
data, in addition to the results with the mutant CHO cells and those with FAB-MS and NMR, supported the identity of the new gene as human
galactosyltransferase I.
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ACKNOWLEDGEMENTS
![]()
FOOTNOTES
To whom correspondence should be addressed. Tel.:
81-52-744-2070; Fax: 81-52-744-2069; E-mail:
koichi@med.nagoya-u.ac.jp.
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ABBREVIATIONS
4-galactosyltransferase,
1,4galactosyltransferase;
p-Nph-
-D-Xyl, p-nitrophenyl-
-D-xylopyranoside;
XGalT-1, galactosyltransferase I
(UDP-galactose:O-
-D-xylosylprotein
4-
-D-galactosyltransferase);
MES, 4-morpholineethanesulfonic acid;
EST, expressed sequence tag;
RACE, rapid amplification of cDNA ends;
NCBI, National Center for
Biotechnology Information;
NOE, nuclear Overhauser effect;
FAB-MS, fast
atom bombardment mass spectroscopy.
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REFERENCES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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