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J Biol Chem, Vol. 274, Issue 35, 24941-24946, August 27, 1999
From the The biologically relevant and active forms of
human immunodeficiency viruses type 1 and 2 reverse transcriptase found
in infectious virions are heterodimers produced in a two-step
dimerization process. Dimerization involves first the rapid association
of the two subunits, followed by a slow conformational change yielding
a fully active form. We have shown that the dimeric nature of reverse
transcriptase represents a important target for the design of a new
class of antiviral agents. In this work, we propose a new strategy for its inhibition by targeting protein/protein interactions during viral
formation in infected cells. From the screening of peptides derived
from the tryptophan cluster at the interface of the connection subdomain, we have designed a short peptide (10 residues) corresponding to residues 395-404, which can block dimerization of reverse
transcriptase in vitro and in infected cells. This peptide
is highly efficient in abolishing the production of viral particles,
without any adverse toxic side effects, when transduced into human
immunodeficiency virus type 1-infected cells together with a new
peptide carrier.
Reverse transcriptase
(RT)1 plays a key role in the
replication of HIV by converting single-stranded genomic RNA into
double-stranded proviral DNA and represents one of the main targets for
the development of AIDS therapy. Most inhibitors of RT described in the
past years, whether nucleoside analogues or nonnucleoside inhibitors
target the polymerase activity of RT but present some limitations
including toxicity and the emergence of resistant strains (1-3).
The biologically relevant and active form of human immunodeficiency
virus reverse transcriptases (HIV-RT) found in infectious virions is a
heterodimer containing two polypeptides, p66 and p51; the latter
derived from the former by proteolytic cleavage of its C-terminal
domain (4, 5). The structure of HIV-1 RT has been solved in different
states: unliganded (6), complexed with nonnucleoside inhibitors (7-9),
complexed with double-stranded DNA (10), and covalently trapped with
DNA template/primer and deoxynucleoside triphosphate (11) and reveals
an asymmetric interaction between the two subunits. The p66 and p51
subunits contain four similar subdomains forming the polymerase domain termed fingers, palm, thumb, and connection with a similar individual structure but a significantly different orientation relative to one
another (6-8).
We have demonstrated that heterodimeric RTs are produced in a two-step
dimerization process, which involves the rapid association of the two
subunits into an inactive dimer, followed by a slow conformational
change yielding the fully active form (12, 13). The dimer interface is
mainly dominated by hydrophobic interactions between the two connection
subdomains (13-15). Based on the x-ray crystallographic structure of
HIV-1 RT, we have shown that the first interaction between p66 and p51
occurs in a Trp-rich hydrophobic cluster located in the connection
subdomain of the two subunits and is followed by a conformational
change that stacks the thumb subdomain of p51 onto the RNase-H domain
of p66 and places the fingers subdomain of p51 in the palm subdomain of
p66 (12).
An interesting feature of HIV-1 RT is that the dimeric form of the
enzyme is absolutely required for all enzymatic activities (16-18). As
such, we have proposed the dimerization process of RT as an interesting
target for AIDS chemotherapy (16, 19, 20). In this work, we describe a
new strategy for RT inhibition by targeting protein/protein
interactions during viral formation in infected cells. We demonstrate
that a short peptide (10 residues) derived from the tryptophan cluster
at the interface of the connection subdomains inhibits dimerization of
RT in vitro and abolishes the production of viral particles
without any adverse toxic side effects when transduced into HIV-1
infected cells.
Peptide Synthesis--
The different peptides were synthesized
by solid phase peptide synthesis using
aminoethyldithio-2-isobutyric acidexpensin resin with a 9050 Pepsynthetizer (Millipore, UK) according to the
Fmoc(N-(9-fluorenyl)methoxycarbonyl)/tert-butyl
method, purified by semi-preparative HPLC and identified by
electrospray mass spectrometry and amino acid analysis (21, 22). To
increase their stability, both peptides were acetylated at the N
terminus and linked to a cysteamide group at the C-terminal part (22).
For cellular localization, peptides were coupled with Lucifer yellow
iodoacetamide dipotassium salt (Molecular Probes) (21).
Enzyme Preparation--
Recombinant HIV-1 BH10 RT
was expressed in Escherichia coli and purified as described
previously (17). Highly homogenous preparations of the heterodimeric
form of the enzyme obtained by co-expressing the 66- and 51-kDa
subunits were used. Enzyme concentration was routinely determined by
Bradford (23) using gravimetrically prepared solutions of RT as a standard.
Polymerase RT Assay--
Polymerase activity was measured in
standard assays using poly(rA)·(dT)15 as a
primer/template as described previously (16). The RT preparations used
showed a specific activity of about 10,000 units/mg, where 1 unit of
enzyme catalyzes the incorporation of 1 nmol of TMP in 10 min at
37 °C into acid-insoluble materials.
HPLC Size Exclusion Chromatography--
Chromatography was
performed as already described (16, 19) using two HPLC columns in
series (Bio-Rad TSK-125 and TSK-250). Size exclusion chromatography was
performed with 5-10 µg of protein, and the columns were eluted with
200 mM potassium phosphate (pH 7.0) at a flow rate of 0.8 ml/min.
In Vitro RT Dimerization Assay--
Dissociation of HIV-1 RT was
achieved by addition of 17% acetonitrile into a 50 mM
MOPS-HCl, pH 7.5 buffer containing 10 mM MgCl2,
50 mM KCl, and 5% glycerol. Association of the subunits was then initiated in the absence or in the presence of increasing concentrations of peptides by a 12-fold dilution into an
acetonitrile-free buffer resulting in a final concentration of 1.4%
acetonitrile. All experiments were performed at 25 °C, with an
enzyme concentration of 0.2-2 µM. Establishment of the
dimerization equilibrium was followed in a time-dependent
manner by size exclusion HPLC and polymerase activity assays using 100 ng of RT (16, 19). The kinetics of formation of native RT were measured
with a 50-ng sample of RT for 5 min only at 37 °C, so as to limit
any further activation by dimerization.
Cell Culture--
Adherent human HS-68 fibroblasts as well as
human MT4 and CEM-SS lymphoblasts in suspension were cultured in
Dulbecco's modified Eagle's medium supplemented with 1% 200 mM glutamine, 1% antibiotics (streptomycin 10,000 µg/ml,
penicillin 10,000 IU/ml) and 10% (w/v) fetal calf serum, at 37 °C
in a humidified atmosphere containing 5% CO2 as described
previously (22). For investigating the cellular localization of
peptides, cells were plated on glass coverslips and grown to 75%
confluency, then overlaid with peptide or MPG·peptide complexes
(ratio 20/1) and incubated for various times. The coverslips were then
rinsed extensively with phosphate-buffered saline and cells were fixed
in 2% paraformaldehyde for 5 min, then rehydrated in
phosphate-buffered saline. Fluorescent images were shot using a Nikon
camera directly connected to a personal computer. The cytotoxicity of
both p7 and p7·MPG complexes were investigated in the cell lines
mentioned above. Cells grown in 35-mm diameter dishes to 75%
confluency (0.5-1.106 cells/dish) were incubated with 0.1 µM to 1 mM p7 alone or complexed to MPG in a
1/20 ratio. Cell culture medium with p7 or p7·MPG was not changed,
and cell proliferation was measured over 4 days. Cytotoxicity was
evaluated with the colorimetric
3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT)
assay, after removing cell culture medium and replacing it with
phosphate-buffered saline containing 5 mg/ml of MTT (24).
Antiviral Activity--
The CD4+ lymphoblastoid CEM cell line
was obtained from the American Type Culture Collection (ATCC). Cells
were cultured in RPMI 1640 medium supplemented with 10% fetal calf
serum, 1% glutamax, and 1% penicillin-streptomycin antibiotic mixture
(Life Technologies, Inc.) to a density of 5 × 105
cells/ml in a 5% CO2 atmosphere. For infection,
106 CEM cells were incubated for 30 min at 4 °C with 100 µl of HIV-1LAI at a concentration of 100 × 50% tissue
culture infective dose. Then cells were washed five times and cultured
at 5 × 105 cells/ml in 24-well microplates with
various concentrations of peptide p7 and MPG·p7 (1 µM
to 0.1 nM), 13B8.2 (66 nM) an anti-CD4 monoclonal antibody (Immunotech), or azidothymidine (10 µM). Viral production was monitored twice a week by
measuring reverse transcriptase activity in 1 ml of cell-free supernatant.
Fluorescence Experiments--
Fluorescence measurements were
performed at 25 °C, using a Spex Fluorolog II Jobin Yvon
fluorimeter. The fluorescence of peptides (0.5-1 µM) was
measured in a total volume of 0.7 ml of buffer containing 50 mM Tris-HCl, 50 nM KCl, pH 7.5. Excitation was
routinely performed at 290 nm, and fluorescence emission intensity was
monitored at 340 nm. Titration curves were fitted using a quadratic
equation with the Grafit program, as already described (22).
Peptide Design--
Based on the knowledge of both the
dimerization process and the different x-ray structures of HIV-1 RT,
the main interface between p66 and p51 subunits has been shown to
involve a cluster of Trp residues in the two connection subdomains (20,
25-27). This cluster forms a hydrophobic patch in the region
containing Peptides Derived from the Connection Domain Inhibit RT Dimerization
in Vitro--
The potential of each peptide to inhibit RT in
vitro was investigated. Dissociation of RT was performed at
25 °C by addition of 17% acetonitrile, and re-association of the
subunits was induced by a 12-fold dilution of the sample into an
acetonitrile-free buffer. The association rate of the subunits was
determined by monitoring the ratio of dimeric RT by HPLC size exclusion
(Fig. 1a), and the activation
rate of dimeric RT was followed by measuring the recovery of polymerase
activity of HIV-1 RT (Fig. 1b). Association and activation
rates of HIV-1 RT in the absence of peptide inhibitors were calculated
as 5.1 104 M
In all cases, the association rate of HIV-1 RT is dependent on the
concentration of peptide used. The titration curves obtained for p1,
p6, and p7 reveal that these peptides exhibit a relatively high
affinity for the two subunits of RT with overall Kd values of 1.2, 0.25, and 0.34 µM, respectively (Fig.
1c). In contrast, the lack of inhibition observed with
peptides p11 and p12 suggests that the C-terminal part of the Trp
cluster is not essential for the inhibition of RT dimerization. Finally
the very low inhibition obtained with p10 confirms the essential role
of Trp398 within the cluster, which is not surprising if
one considers that in the structure of HIV-1 RT, residues "KETWET"
within Cell Delivery of the Peptide Inhibitor--
We further
investigated the delivery of peptide p7 into cells and its antiviral
activity on infected cell lines. The main problems in the delivery of
drugs into cells are crossing the cell membrane and reaching the target
within the cell. To locate peptides in different cell lines, we
exploited the inherent properties of the cysteamide group at the
C-terminal end of the peptide to covalently link a fluorescent probe,
Lucifer yellow. Peptide 7 was applied onto cultured human adherent
HS-68 fibroblasts in the presence of 10% serum. In these conditions no
degradation of the peptides could be detected after 1 h
incubation. As shown in Fig. 3, peptide
inhibitors entered cells poorly and after 1 h of incubation,
localized in the cytoplasm (Fig. 3b). To overcome the lack
of efficient cell delivery, we used a carrier peptidyl system (MPG)
derived from the fusion peptide of gp41 and containing the nuclear
localization sequence of SV40 large T antigen (22). This bifunctional
carrier contains a hydrophobic N-terminal domain and a hydrophilic
C-terminal moiety, the latter being extremely powerful for the delivery
of oligonucleotides and plasmids into cells (22). Here we used the
hydrophobic domain of this carrier to form contacts with the anti-RT
peptides.
Binding of p7 to MPG was determined by measuring changes in the
intrinsic Trp fluorescence of the peptide, upon titration of a fixed
concentration of MPG (1 µM) with increasing
concentrations of p7. The corresponding titration curve (Fig.
3e), reveals that p7 interacts strongly with MPG, induces an
important quenching of fluorescence up to 30%, with a dissociation
constant of approximately 30 ± 7 nM. The fluorescence
of MPG should be negligible compared with that of p7, which contains 3 Trp residues. The quenching of fluorescence of MPG observed, suggests
that the fluorescence of p7 is completely abolished upon binding to
MPG. Saturation takes place for a concentration of p7 of 50 nM, which is 20-fold lower than that of the MPG, suggesting
that p7 interacts strongly with more than one molecule of MPG. From the
Kd and the saturation concentration values we
estimated the ratio to 30 molecules of MPG for one molecule of peptide inhibitor.
The preformed MPG·p7 complex was separated and purified by size
exclusion HPLC in a high concentration of salt (200 mM
NaCl). Three different subpopulations were observed (Fig.
3f): the main peak (1) corresponding to a molecular mass of
~50 kDa, which can be assessed as a complex of p7·MPG at a 1/20
ratio, when taking into account the molecular weight of each peptide
(2.4 kDa for MPG and 0.8 kDa for p7); peaks 2 and 3 correspond to lower
molecular weight complexes (20 kDa) containing both MPG and p7 and to
the monomeric form of MPG, respectively. No monomeric p7 was detected, suggesting that in these conditions all p7 is complexed with MPG. The
stability of the p7·MPG complex in high salt concentrations and the
presence of hydrophobic residues in the sequence of p7 favor the notion
of a hydrophobic interaction between the two peptides. Moreover the
interaction between p7 and MPG promotes further MPG/MPG interactions,
leading to the formation of a peptide carrier cage around p7. The main
contacts between MPG and anti-RT peptides may involve the fusion
sequence of gp41 and the Trp cluster.
The high molecular weight p7·MPG complex was purified and both its
cellular localization and antiviral activity were analyzed. When
complexed at a 20/1 ratio with MPG, p7 localized rapidly in the
cytoplasm in less than 5 min, but after 30 min could be found mainly in
the nucleus (Fig. 3, c and d). In contrast when complexed with MPG at a 10/1 ratio, most of p7 was retained in the cell
membranes, suggesting that this complex is not stable enough in the
cell culture medium. Hence, formation of a large particle seems to
improve the stability of p7 and to increase its delivery into cells.
Toxicity of the Peptide Inhibitor--
The degree of toxicity of
p7 and of the MPG/p7 (20/1) complex were analyzed in different cell
lines, including HS-68, MT-4, and CEM-SS cell lines. No toxicity was
observed for concentrations of p7 up to 10 µM, and cell
viability was only decreased by about 5-10%, depending on the cell
line, for a peptide concentration of 100 µM (Fig.
4a). We have already reported
that MPG alone is not toxic at concentrations up to 100 µM (19); when complexed with p7, no cytoxicity was
observed for concentrations up to 1 mM (Fig.
4b), which is much higher than the concentration required for inhibition of HIV-1 RT by p7 in vitro or than the
Kd value of this peptide for the subunits of RT. In
conclusion, the interaction between p7 and MPG, decreases toxicity and
improves cell delivery of the peptide.
Antiviral Activity of the Peptide Inhibitor--
The ability of p7
and of the p7·MPG complex to inhibit HIV-1 infection in cultured
CEM-T cells was measured by monitoring RT activity in the cell-free
culture supernatants. The peptides were added after a 30-min adsorption
of the virus at 4 °C, just before incubation of the cells at
37 °C. Kinetics of HIV-1 production in the presence of p7 or of
MPG·p7 are reported in Fig. 5. We investigated the kinetics of viral production in the presence of
different concentrations of p7 and MPG/p7, in comparison with two other
HIV inhibitors: azidothymidine (10 µM) and anti-CD4 antibody 13B8.2 (66 nM) (28). In the presence of 100 nM of p7 no virus was detected up to 22 days post-infection
(Fig. 5a). For a concentration of 10 nM of p7,
viral replication was inhibited during the first 15 days, after which
slow propagation of virus was detected in the RT assay and confirmed by
dosage of p24 (data not shown). For lower concentrations of p7 (1 and
0.1 nM), viral production was slightly delayed compared
with the control without inhibitor. When p7 was complexed to MPG,
antiviral activity was markedly improved, as no virus was detected 22 days after infection with 10 nM of p7 (Fig. 5b).
Even at the lowest concentration used (0.1 nM), no virus
was detected up to 15 days post-infection. That no virus was detected
after at least 1 month at higher concentrations of p7·MPG complex
(100 nM), suggests that the viral production observed at
low concentrations of p7 is mainly due to the limitation of p7 and not
to a resistant mutation in RT. The p7·MPG complex is therefore at
least 10-fold more efficient than p7, probably due to the fact that MPG
enhances both cell delivery and stability of the antiviral peptide in
cell culture medium.
The antiviral properties of a peptide derived from the connection
domain of RT validate the concept that dimerization of RT is an
excellent target for the design of new HIV inhibitors. From our
results, we conclude that peptide p7 is a very promising antiviral agent for many reasons. (a) p7·MPG complex strongly inhibits HIV-1 production in infected cells and can be used at a very low
concentration (1 nM), without any adverse toxic side
effects. (b) The sequence of p7 KETWETWWTE is well conserved in all
isolates of HIV-1and HIV-2 and is not reported in other proteins except
reverse transcriptases (12, 20, 25), suggesting that the Trp cluster is
a natural key domain involved in the formation of active RT and that
such a peptide can be used as a highly specific inhibitor of both HIV-1 and HIV-2. (c) p7 being a short peptide (10 residues) has proven extremely important for its development as a new antiviral drug, as
shortness improves both its stability in cell culture medium and its
potency against AIDS.
Two hypotheses, which are not mutually exclusive, can be proposed to
explain the mechanism through which RT activity is inhibited by these
peptides in infected cells: peptides may block the formation of active
RT before budding of the virus during the last step of the viral cycle
and/or may also inhibit the first step of infection by inducing the
dissociation of a preformed RT dimer required for reverse
transcription. That heterodimeric RT is extremely stable and difficult
to dissociate in vitro (13) favors the model of inhibition
of the formation of active RT. The nature of the in vivo
pathway of RT activation is not yet clear, but may require first an
association leading to p66/p66 homodimer, followed by the proteolytic
cleavage of one of the RNase-H domains by HIV protease (4, 5); the
interaction between the thumb domain of p51 and the RNase H domain of
p66 may then take place to yield mature heterodimeric RT. The important
antiviral activity of p7 observed at a concentration 100-fold lower
than the Kd value measured in vitro
between p7 and RT subunits (0.24 µM), suggests that
in vivo subunit association is directly controlled by the
connection subdomains and that p7 may also interfere with the
conversion of the p66/p66 homodimer into a p51/p66 heterodimer.
We thank Katrin Rittinger, Tobias Restle, and
Jean Baillon for helpful discussions and Marcel Dorée for
encouragement and support.
*
This work was supported by the CNRS, and by grants from the
Agence Nationale pour la Recherche sur le SIDA (ANRS), the Association pour la Recherche contre le Cancer (ARC ), and the Fondation pour la
Recherche Médicale (FRM ) SIDACTION.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
Supported by fellowships from the ANRS.
**
To whom correspondence should be addressed: Centre de Recherches de
Biochimie Macromoléculaire, CNRS, 1919 Route de Mende, 34283 Montpellier, Cedex 5, France. Tel.: 33-04-67-61-33-92; Fax: 33-04-67-52-15-59; E-mail: gilles@puff.crbm.cnrs-mop.fr.
2
M. C. Morris and G. Divita, unpublished results.
The abbreviations used are:
RT, reverse
transcriptase;
HIV, human immunodeficiency virus;
HPLC, high pressure
liquid chromatography;
MOPS, 4-morpholinepropanesulfonic acid;
MTT, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide.
A New Potent HIV-1 Reverse Transcriptase Inhibitor
A SYNTHETIC PEPTIDE DERIVED FROM THE INTERFACE SUBUNIT
DOMAINS*
§,
§,
,
,
, and
**
Biophysics Department, Centre de Recherches
de Biochimie Macromoléculaire, CNRS, 1919 Route de Mende, 34283 Montpellier, Cedex 5, France, ¶ Laboratoire Infections
Rétrovirales et Signalisation Cellulaire, CRBM-CNRS UPR1086,
Institut de Biologie, 4, Boulevard Henri IV, 34060 Montpellier Cedex 1, France, and
Max Planck Institut fur Molekular Physiologie,
Rheinlanddamm 201, 44139 Dortmund, Germany
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS AND DISCUSSION
CONCLUSION
REFERENCES
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS AND DISCUSSION
CONCLUSION
REFERENCES
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EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS AND DISCUSSION
CONCLUSION
REFERENCES
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RESULTS AND DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS AND DISCUSSION
CONCLUSION
REFERENCES
-helix L and
-strand 19, (residues 389 to 422 in the
BH10 isolate) (14, 15, 25). We have previously demonstrated
that a peptide encompassing residues 388 to 415, in the connection
domain can block the dimerization of HIV-1 and HIV-2 RTs in
vitro (19, 20). To define a minimal sequence required for the
inhibition of RT dimerization and to propose it as a new
"antiviral-drug" for infected cells, 12 peptides (sequences are
reported in Table I) derived from this
interface domain were designed and synthesized with an acetylated N
terminus and a C-terminal cysteamide group (21). These groups were
added to increase the stability of the peptides and to improve their
delivery into cells. Moreover the cysteamide group was useful for the
covalent attachment of a fluorescent probe, allowing to investigate the
cellular localization of the peptides.
Inhibition of HIV-1 RT dimerization by synthetic peptides
1 s
1
and 0.17 h
1, respectively. The presence of 5 µM of the 29-mer peptide (p1) corresponding to the
-helix L and
-strand 19 of the connection domain, strongly
reduced both the association and activation rate constants to 0.8 103 M
1 s
1 and 0.05 h
1, respectively. As reported in Table I, most of the
peptides derived from the Trp cluster of the connection subdomain
affected both the association and the activation rates of heterodimeric HIV-1 RT. This correlation between polymerase activity and dimer formation reveals that lack of activity is due to the direct targeting by these peptides of the first step of the dimerization process of RT:
monomer/monomer association. Peptides p5 (395-410), p6 (395-407), and
p7 (395-404) corresponding to the N-terminal sequence of the Trp
cluster were most efficient, reducing the association and activation
rate constants of RT to 0.31-0.21 103
M
1 s
1 and 0.018-0.012
h
1, respectively at 5 µM. That these
shorter peptides should be at least 3-fold more efficient than longer
peptides (p1 and p3) is probably due to their lack of folding, whereas
p1 and p3 tend to fold into an
-helix and aggregate in solution.

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Fig. 1.
Peptide inhibition of HIV-1 RT dimerization
process in vitro. Heterodimeric RT (5 µM) was
first dissociated with 17% of acetonitrile at pH 7.5, 25 °C, and
monomer-monomer association was initiated by a 12-fold dilution in an
acetonitrile-free buffer in the absence (
) or presence of 10 µM of peptide p1 (
), p6 (
), and p7 (
).
a, inhibition of HIV-RT dimerization by the different
peptides was monitored by following the kinetics of monomer-monomer
association by HPLC size exclusion chromatography with 10-µg samples
of RT, and the data were analyzed according to a second-order reaction.
b, inhibition by the different peptides was monitored by
following the kinetics of formation of active heterodimeric RT,
quantified in a polymerase activity assay. Curves were fitted as a
single exponential. c, dependence of the dimerization rate
constant of HIV-1 RT on peptide concentration. Monomer-monomer
association was performed in the presence of increasing concentrations
of p11 (
), p1 (
), p6 (
), and p7 (
) peptides. Dimerization
rate constants were determined by fitting the
time-dependent association curve obtained by size exclusion
HPLC as a second-order reaction.
-helix L forms the main contact at the p66/p51 interface
(Fig. 2b). Moreover, mutation
of Trp398 and Trp401 (in the
HIV-1BH10 isolate) strongly affected the stability of the
dimeric form of HIV-1 RT in
vitro.2 However, this
short sequence was not sufficient for inhibition of RT dimerization.
Indeed, peptide p7, corresponding to full
-helix L, is the minimal
sequence required to inhibit dimerization of RT in vitro.
Based on these data we propose the minimal 10-residue peptide,
KETWETWWTE, as an inhibitor of RT dimerization.

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Fig. 2.
Structure of HIV-1 RT and location of the Trp
cluster in the connection subdomain. a, structure of
HIV-1 RT as revealed by x-ray crystallography (6-11). p51 and p66
subunits are in green and red, respectively. The
structures of p7 in p66 and p51 are shown in white.
b, location of the Trp398, Trp401,
and Trp402 in the thumb subdomain interface between p66 and
p51.

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Fig. 3.
Formation, cellular localization, and cell
delivery of MPG·p7 complex. Peptides and complexes were applied
onto HS68 plated on glass coverslips and grown to 75% confluency in
the presence of 10% serum. The cellular localization of p7, and of the
MPG·P7 complex (ratio 1/20) was monitored by confocal microscopy
thanks to C-terminally fluorescently labeled peptide. a,
control experiment with free Lucifer yellow; b, 1 µM of p7 in the absence of MPG; c and
d, 0.1 µM of p7·MPG complex incubated for 30 min and 5 min, respectively, before fixation and observation;
e, the formation of the MPG·p7 complex was monitored by
measuring changes in intrinsic tryptophan fluorescence of MPG at 340 nm, upon excitation at 290 nm. A fixed concentration of MPG (1 µM) was titrated with increasing amounts of p7;
f, the different populations of p7 and p7·MPG complexes
were purified by size exclusion HPLC. MPG (5 µM) and p7
(0.1 µM) were incubated for 15 min in phosphate buffer,
pH 7.0, then applied onto a size exclusion HPLC column (TSK 125, Bio-Rad 7, 5 × 300 mm) and eluted with 200 mM
potassium phosphate, pH 7.0, at a flow rate of 1.0 ml/min.

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Fig. 4.
Cytotoxicity of p7 and MPG·p7 complex.
The toxicity of p7 (panel a) and of the p7·MPG
complex (ratio 20/1) (panel b) were monitored in different
cell lines including HS68 (
), MT4 (
), and CEM-SS (
) cells.
Cell death was quantified by MTT staining after 2 days of
incubation.

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Fig. 5.
Effect of different concentrations of p7 and
MPG·p7 on HIV-1 infection. CEM cells exposed to 100 µl of
viral suspension containing 100 × 50% tissue culture infective dose
of HIV-1LAI were cultured in medium alone (
),
medium-supplemented with 13B8.2 (66 nM) (
),
azidothymidine (10 µM) (
), peptide 7 (panel
a) or MPG·p7 (panel b) at 1 µM (
),
100 nM (
), 10 nM (
), 1 nM
(
), and 0.1 nM (
). Viral production was monitored by
measuring RT activity. Culture supernatants from virus-free CEM cells
(
) were tested as a control.
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CONCLUSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS AND DISCUSSION
CONCLUSION
REFERENCES
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ACKNOWLEDGEMENTS
![]()
FOOTNOTES
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ABBREVIATIONS
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REFERENCES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS AND DISCUSSION
CONCLUSION
REFERENCES
1.
Richman, D. D.
(1996)
Adv. Exp. Med. Biol.
394,
383-395[Medline]
[Order article via Infotrieve]
2.
Erickson, J. W.,
and Burt, K. S.
(1996)
Annu. Rev. Pharmacol. Toxicol.
36,
545-571[CrossRef][Medline]
[Order article via Infotrieve]
3.
Goody, R. S.
(1995)
Nat. Med.
6,
519-520
4.
Di Marzo Veronese, F.,
Copeland, T. D.,
De Vico, A. L.,
Rahman, R.,
Oroszlan, S.,
Gallo, M.,
and Sarngadharan, M. G.
(1986)
Science
231,
1289-1291 5.
Lightfoote, M. M.,
Colligan, J. E.,
Folks, T. M.,
Fauci, A. S.,
Martin, M. A.,
and Venkatesan, S.
(1986)
J. Virol.
60,
771-775 6.
Rodgers, D. W.,
Gamblin, S. J.,
Harris, B. A.,
Ray, S.,
Culp, J. S.,
Hellmig, B.,
Woolf, D. J.,
Debouck, C.,
and Harrison, S. C.
(1995)
Proc. Natl. Acad. Sci. U. S. A.
92,
1222-1226 7.
Kohlstaedt, L. A.,
Wang, J.,
Friedman, J. M.,
Rice, P. A.,
and Steitz, T. A.
(1992)
Science
256,
1783-1790 8.
Esnouf, R.,
Ren, J.,
Ross, C.,
Jones, Y.,
Stammers, D.,
and Stuart, D.
(1995)
Nat. Struct. Biol.
2,
303-308[CrossRef][Medline]
[Order article via Infotrieve]
9.
Ren, J.,
Esnouf, R.,
Garman, E.,
Somers, D.,
Ross, C.,
Kirby, I.,
Keeling, J.,
Darby, G.,
Jones, Y.,
Stuart, D.,
and Stammers, D.
(1995)
Nat. Struct. Biol.
2,
293-302[CrossRef][Medline]
[Order article via Infotrieve]
10.
Jacobo-Molina, A.,
Ding, J.,
Nanni, R. G.,
Clark, A. D., Jr.,
Lu, X.,
Tantillo, C.,
Williams, R. L.,
Kamer, G.,
Ferris, A. L.,
Clark, P.,
Hizi, A.,
Hughes, S. H.,
and Arnold, E.
(1993)
Proc. Natl. Acad. Sci. U. S. A.
90,
6320-6324 11.
Huang, H.,
Chopra, R.,
Verdine, G. L.,
and Harrison, S. C.
(1998)
Science
282,
1669-1675 12.
Divita, G.,
Rittinger, K.,
Geourjon, C.,
Deleage, G.,
and Goody, R. S
(1995)
J. Mol. Biol.
245,
508-521[CrossRef][Medline]
[Order article via Infotrieve]
13.
Divita, G.,
Rittinger, K.,
Restle, T.,
Immendorfer, U.,
and Goody, R. S.
(1995)
Biochemistry
34,
16337-16346[CrossRef][Medline]
[Order article via Infotrieve]
14.
Wang, J.,
Smerdon, S. J.,
Jäger, J.,
Kohlstaedt, L. A.,
Rice, P. A.,
Friedman, J. M.,
and Steitz, T. A.
(1994)
Proc. Natl. Acad. Sci. U. S. A.
91,
7242-7246 15.
Becerra, S. P.,
Kumar, A.,
Lewis, M. S.,
Widen, S. G.,
Abbotts, J.,
Karawya, E. M.,
Hughes, S. H.,
Shiloach, J.,
and Wilson, S. H.
(1991)
Biochemistry
30,
11707-11719[CrossRef][Medline]
[Order article via Infotrieve]
16.
Restle, T.,
Muller, B.,
and Goody, R. S.
(1990)
J. Biol. Chem.
265,
8986-8988 17.
Muller, B.,
Restle, T.,
Weiss, S.,
Gautel, M.,
Sczakiel, G.,
and Goody, R. S.
(1989)
J. Biol. Chem.
264,
13975-13978 18.
Restle, T.,
Müller, B.,
and Goody, R. S.
(1992)
FEBS Lett.
300,
97-100[CrossRef][Medline]
[Order article via Infotrieve]
19.
Divita, G.,
Baillon, J. G.,
Rittinger, K.,
Chermann, J. C.,
and Goody, R. S.
(1995)
J. Biol. Chem.
270,
28642-28646 20.
Divita, G,
Restle, T.,
Goody, RS.,
Chermann, JC.,
and Baillon, J. G.
(1994)
J. Biol. Chem.
269,
13080-13083 21.
Mery, J.,
Granier, C.,
Juin, M.,
and Brugidou, J.
(1993)
Int. J. Pept. Protein Res.
42,
44-52[Medline]
[Order article via Infotrieve]
22.
Morris, M. C.,
Vidal, P.,
Chaloin, L.,
Heitz, F.,
and Divita, G.
(1997)
Nucleic Acids Res.
25,
2730-2736 23.
Bradford, M.
(1976)
Anal. Biochem.
72,
248-254[CrossRef][Medline]
[Order article via Infotrieve]
24.
Mosmann, T.
(1983)
J. Immunol. Methods
65,
55-63[CrossRef][Medline]
[Order article via Infotrieve]
25.
Baillon, J. G.,
Nashed, N. T.,
Kumar, A.,
Wilson, S. H.,
and Jerina, D. M.
(1991)
New Biol.
3,
1015-1029[Medline]
[Order article via Infotrieve]
26.
Debyser, Z.,
and De Clercq, E.
(1996)
Protein Sci.
5,
278-286[Abstract]
27.
Jacques, P. S.,
Wöhrl, B. M.,
Howard, K. J.,
and Le Grice, S.
(1994)
J. Biol. Chem.
269,
1388-1393 28.
Benkirane, M.,
Corbeau, P.,
Housset, V.,
and Devaux, C.
(1993)
EMBO J.
12,
4909-4921[Medline]
[Order article via Infotrieve]
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