J Biol Chem, Vol. 274, Issue 44, 31543-31552, October 29, 1999
The Homeodomain Transcription Factor NK-4 Acts as either a
Transcriptional Activator or Repressor and Interacts with the p300
Coactivator and the Groucho Corepressor*
Cheol Yong
Choi
,
Young Mi
Lee
§,
Young Ho
Kim
,
Taekyu
Park¶,
Byung Hun
Jeon
,
Robert A.
Schulz
, and
Yongsok
Kim
**
From the
Laboratory of Molecular Cardiology, NHLBI,
National Institutes of Health, Bethesda, Maryland 20892, the
¶ Department of Molecular Biology, Kon Kuk University, Chung Ju,
Korea, and the
Department of Biochemistry and Molecular Biology,
The University of Texas M. D. Anderson Cancer Center,
Houston, Texas 77030
 |
ABSTRACT |
NK-4 (tinman) encodes an
NK-2 class homeodomain transcription factor that is required for
development of the Drosophila dorsal mesoderm, including
heart. Genetic evidence suggests its important role in mesoderm
subdivision, yet the properties of NK-4 as a transcriptional regulator
and the mechanism of gene transcription by NK-4 are not completely
understood. Here, we describe its properties as a transcription factor
and its interaction with the p300 coactivator and the Groucho
corepressor. We demonstrate that NK-4 can activate or repress target
genes in cultured cells, depending on functional domains that are
conserved between Drosophila melanogaster and Drosophila virilis NK-4 genes. Using GAL4-NK-4
fusion constructs, we have mapped a transcriptional activation domain
(amino acids 1-110) and repression domains (amino acids 111-188 and
the homeodomain) and found an inhibitory function for the homeodomain
in transactivation by NK-4. Furthermore, we demonstrate that
NK-4-dependent transactivation is augmented by the p300
coactivator and show that NK-4 physically interacts with p300 via the
activation domain. In addition, cotransfection experiments indicate
that the repressor activity of NK-4 is strongly enhanced by the Groucho
corepressor. Using immunoprecipitation and in vitro
pull-down assays, we show that NK-4 directly interacts with the Groucho
corepressor, for which the homeodomain is required. Together, our
results indicate that NK-4 can act as either a transcriptional activator or repressor and provide the first evidence of NK-4 interactions with the p300 coactivator and the Groucho corepressor.
 |
INTRODUCTION |
Homeobox genes encode sequence-specific DNA-binding proteins that
play important roles during development by regulating transcription in
organisms as diverse as insects, nematodes, mammals, and plants (1, 2).
These homeodomain transcription factors can act as transcriptional
activators or repressors that require separate but sometimes
overlapping functional domains including a DNA-binding domain for their
transcriptional activities (3-5). In addition, it was recently
demonstrated that homeoproteins interact with other transcription
factors that lead to their functional specificity in vivo,
utilizing a specific but conserved domain of the homeoproteins for
these interactions (5-11). In general, sequence-specific DNA-binding proteins recruit a coactivator or corepressor for their transcriptional activation or repression of target genes (12, 13), yet the mechanism of
activation or repression by homeoproteins is still poorly understood.
The NK-4 homeobox gene tinman (14-17), belongs
to the NK-2 class that includes a large number of vertebrate homeobox
genes (18-20). Analysis of tinman mutant embryos revealed
that tinman function is required for development of the
dorsal mesoderm including the heart during Drosophila
embryogenesis (16, 17). Additionally, tinman activity is
required for the formation of glia-like dorsal-median cells (21),
gonadal mesoderm (22-24), and a subset of somatic body wall muscles
(16). In mammals, targeted disruptions of the mouse Nkx-2
genes (Nkx-2.1/TTF1, Nkx-2.2, and Nkx-2.5)
revealed their functions in organogenesis including heart development
(25-27). Likewise, it has recently been revealed that human NKX2-5 is
involved in nonsyndromic, human congenital heart disease (28). Also, cross-phylum rescues of the NK-2 class of homeobox genes have recently
been demonstrated (29, 30). For example, zebrafish nkx 2.5 efficiently rescues a ceh-22 mutant when expressed in the
pharyngeal muscle of Caenorhabditis elegans (29), and mouse Nkx2-5 rescued only visceral mesoderm when tested for its
ability to rescue the tinman mutant phenotype of
Drosophila (30). Thus, genetic evidence clearly indicates
that NK-4 plays an important role during development and
suggests that its function is well conserved in the animal species.
NK-4 is initially expressed in the presumptive mesoderm at
the cellular blastoderm stage, continues to be expressed in all mesodermal cells during germ band elongation, and eventually becomes restricted to dorsal mesodermal cells including precursor cells of the
heart (15). Recently, NK-4 has been shown to be regulated by
the myogenic factor Twist during embryogenesis (31, 32). In addition,
previous work has shown that inductive signals from dorsal ectodermal
cells such as Dpp can induce tinman expression in the dorsal
mesoderm (33-35). Similarly, chicken Nkx-2.5, a potential vertebrate homologue of the Drosophila NK-4 gene, was shown
to be induced by BMP-2 and BMP-4 (36), suggesting that regulatory pathways for its induction are also conserved. We have previously demonstrated that NK-4 binds to a target sequence (5'-TCAAGTG-3') (31,
37) that is related to the binding sites of other NK-2 class
homeodomain proteins (20, 31, 38-41) and autoregulates its own gene in
cultured cells (31). Additionally, it has recently been shown that NK-4
directly activates the D-mef2 gene in cardial cells
(37) and ventral muscle founder cells (42), making
D-mef2 the first known in vivo target of
NK-4 to be described. Cofactors of NK-4 are totally unknown. However,
physical interaction of Nkx-2.5 with GATA-4 has been reported,
suggesting that they may act as mutual cofactors (43-45).
Despite the growing body of evidence that supports an important role
for NK-4 during embryogenesis, the properties of NK-4 as a
transcriptional regulator and the mechanism of gene transcription by
NK-4 are still poorly understood. In this study, we characterize the
functional domains of NK-4 that are responsible for its transcriptional activity. Our analysis reveals that NK-4 acts as either a
transcriptional activator or repressor that utilizes separate
functional domains for its transcriptional activity. Furthermore, we
provide the first evidence of interaction of NK-4 with the p300
coactivator and the Groucho corepressor.
 |
MATERIALS AND METHODS |
GAL4 Fusion Constructs--
For the generation of GAL4-NK-4
fusion constructs (Fig. 2A), corresponding coding regions
for NK-4 were amplified by
PCR1 (30 cycles of 1 min at
95 °C, 1 min at 55 °C, 2 min at 72 °C) with specific primers,
and amplified DNA fragments were codigested with EcoRI and
XbaI (in the case of A4 and A5 constructs, EcoRI digestion). These DNA fragments were subcloned into the
EcoRI/XbaI sites (in the case of constructs A4
and A5, EcoRI site) of the pSG424 expression vector (46).
Open reading frames of each construct were confirmed either by
sequencing with specific primers or by expression of fusion genes in
E. coli (Fig. 5; see below) or by expression of GFP-NK-4
fusion genes in CV-1 cells. Specific primer sets used for PCR
amplifications are as follows: A1, primer 20 and primer 502; A13,
primer 20 and primer 69; A4, primer 20 and primer 70; A5, primer 20 and
primer 25; A6, primer 20 and primer 501; A7, primer 20 and primer 520;
A8, primer 20 and primer 500; A10, primer 519 and primer 501; A14,
primer 9516 and primer 501; A15, primer 9517 and primer 501; A12,
primer 912 and primer 502; A18, primer 9515 and primer 502; A19, primer
9525 and primer 502; A2, primer 422 and primer 502; A23, primer 9513 and primer 502; A24, primer 9536 and primer 502; A31, primer 9513 and
primer 9538; A32, primer 9515 and primer 9535; A33, primer 9515 and
primer 423; A34, primer 9515 and primer 9537; A35, primer 9515 and
primer 9538.
The sequences of specific primers (restriction site is underlined) are
as follows: primer 20, 5'-TGGGAATTCATGTTGCAGCACCATCAG-3'; primer 25, 5'-CTAGAATTCAACTGCGAGGCGGACATGTT-3'; primer 69, 5'-CAATCTAGAAAGCTTTTGCGCGATTAT-3'; primer 70, 5'-GGGAATTCTTGGCGCCCTCATCTGAACC-3'; primer 422, 5'-GGGGAATTCGAGGTGTACGGTGGAGC-3'; primer 423, 5'-GGGTCTAGAAGGGGATTGACGCACAGC-3'; primer 500, 5'-CAATCTAGACTCCGTTTGGTTGACCAT-3'; primer 501, 5'-CAATCTAGATGGTGGCGCCATCGTCCA-3'; primer 502, 5'-CAATCTAGAATAAATTAGAGACTCGAA-3'; primer 519, 5'-CAAGAATTCTACTACGATCACTACACT-3'; primer 520, 5'-GTTTCTAGAGTGGGGATTCTGGTACTC-3'; primer 912, 5'-CAGGAATTCATGGTCAACCAAACGGA-3'; primer 9513, 5'-CTAGAATTCAAAAAGGATAACAGCCAG-3'; primer 9515, 5'-CTAGAATTCTCGTCGTCCCTATCGCCA-3'; primer 9516, 5'-CTAGAATTCTACGAAGGTTCCTACGGG-3'; primer 9517, 5'-CTTGAATTCGAGTACCAGAATCCCCAC-3'; primer 9525, 5'-CTAGAATTCTACGCCGGCGCCTCGGCC-3'; primer 9535, 5'-CTATCTAGACTCACCAGATCCGGCGTA-3'; primer 9536, 5'-CTAGAATTCGGCATCGCCAAGCATCTG-3'; primer 9537, 5'-CTATCTAGAGGTCACCTGGCTGTTATC-3'; primer 9538, 5'-CTATCTAGACTCGCAGTCGATGTCGCC-3'.
For the NK4A6 construct (Fig. 3A), DNA fragments containing
the activation domain (amino acids (aa) 1-110) of NK-4 were amplified with specific primers (primer 20 and primer 21 (5'-CAAGAATTCTGGTGGCGCCATCGTCCA-3')), digested with
EcoRI, and subcloned into the EcoRI site of the pSG424 expression vector. For the SG424VP16 construct, DNA fragments containing the activation domain (aa 411-490) of VP-16 were amplified by PCR with specific primers (primer VPAD1
(5'-GCATGAATTCGCAGATCTGGCCCCCCCG-3') and primer VPAD2
(5'-GATTGAATTCCCCACGGTACTCGTCAAT-3')) and subcloned into
the EcoRI site of pSG424. For the NK4HD1 construct that
contains the NK-4 homeodomain (aa 297-364), DNA fragments were
amplified by PCR with specific primers (primer NK4-53
(5'-GATGAATTCAAGCCCCGGATGAAGCGAAAG-3') and primer 9538) and
subcloned into the EcoRI/XbaI sites of the pSG424
vector. For the cloning of the NK-1 homeodomain (aa 531-628), DNA
fragments were amplified by PCR with specific primers (primer NK1-53
(5'-CAGGAATTCCGTAATGGGGATGGAAAG-3') and primer NK1-35
(5'-CTATCTAGATGCCCCCGGACCGAAGGA-3')) and subcloned into the
EcoRI/XbaI sites of the pSG424 vector to generate
the GAL4-NK1HD plasmid. For constructions of series of the GAL4-NK-4
fusion expression vectors used in Fig. 3, plasmids containing the
activation domain of either NK-4 (NK4A6 or NK4A6TDm) or VP16
(SG424VP16) were digested with EcoRI, and DNA fragments were
eluted from the gel and subcloned into the EcoRI site of either the GAL4-NK-4 fusion constructs (A2, A31, NK4HD1, NK4HD(NQ), and
NK4HD(SA); see below) or the GAL4-NK-1 fusion construct
(GAL4-NK1HD).
Site-directed Mutagenesis--
A PCR-based method was used to
generate mutations within either the TN domain or the homeodomain. For
the NK4A6TDm construct that contains a mutation (Phe
Ala at aa 38, TTT
GCT) within the TN domain, DNA fragments (TDm, aa 1-43) were
amplified by PCR with specific primers (primer 20 and primer NK4FA
(5'-GTTCAGGATATCCTTGACCGAAGCTGGAGTGGTGTTCAGGGC-3'), and amplified DNA fragments were codigested with EcoRI
and EcoRV. The corresponding region of the NK4A6 construct
was replaced by the TDm DNA fragments to generate the NK4A6TDm
expression vector. For the A6-NK4HD(NQ) construct that contains a
mutation (Asn
Gln at aa 351, AAT
CAG) at the helix III region
of the homeodomain, two separate DNA fragments (fragment A, aa
188-356; fragment B, aa 345-416) were amplified by PCR with specific
primers (fragment A, primer 422 and primer 9540 (5'-CGATTTGTAGCGCCGCTGCTGGAACCAAATCTTCACTTG-3'); fragment B, primer 9541 (5'-CAAGTGAAGATTTGGTTCCAGCAGCGGCGCTACAAATCG-3' and
primer 502). Mixed DNA fragments (A and B) were denatured and
reannealed. DNAs (39-nucleotide overlap) were gap-filled with Vent DNA
polymerase, and gap-filled DNAs were subjected to PCR with specific
primers (primer 422 and primer 502). Amplified DNAs were gel-eluted and
subcloned into the EcoRI/XbaI sites of the pSG424
expression vector to generate the NK4HD(NQ) plasmid. For the
A6NK4HD(SA) construct that contains a mutation (Ser
Ala at position
309, TCC
GCC) at the helix I region of the homeodomain, two
separate DNA fragments (fragment C, aa 267-309; fragment D, aa
309-364) were amplified by PCR with specific primers (fragment C,
primer 9539 (5'-CAAGAATTCGATAACAGCCAGGTGACC-3' and primer
NK4SA-1 (5'-GACTGAAGACTGGGCAAAGAGCACGCGAGGCTTTCG-3');
fragment D, primer NK4SA-2
(5'-GACTGAAGACTTTGCCCAGGCACAGGTCCTGGAGCT-3') and primer 9538). DNA fragments (C and D) were digested with
BbsI and ligated together. The ligated DNAs were codigested
with EcoRI and XbaI and then subcloned into the
corresponding sites of the pSG424 vector to generate the NK4HD(SA)
plasmid. Mutations and open reading frames of the clones were confirmed
by sequencing.
Expression Vectors, Cell Transfections, and CAT Assays--
Cell
growth, transfections into cells with indicated reporters and
expression vectors using the calcium phosphate precipitation method,
normalization of transfection efficiency with
-galactosidase activity, and CAT assays with a CAT enzyme-linked immunosorbent assay
kit (Roche Molecular Biochemicals) were performed as described (31).
For the constructions of truncated NK-4 expression vectors (d8 and d6),
DNA fragments (121 bp, from 5'-untranslated region to the first ATG
codon) were amplified by PCR with specific primers (primer NK453
(5'-TAAGTCGACGCGGCCGCGTACCCAGATTCCAATTC-3') and primer LEE10 (5'-GATGAATTCCATCCTCGCTGTGCGAT-3')).
Amplified DNA was codigested with EcoRI and
SalI and subcloned into the EcoRI/SalI sites of pBluscript vector in order to generate the pKSII-NK4N plasmid.
Subsequently, coding regions of NK-4 from GAL4-NK-4 chimeras (A18 and
A2 in Fig. 2A, d8 and d6 in Fig. 1, respectively), which were obtained by codigestion with EcoRI and XbaI
followed by gel elution, were subcloned into the
EcoRI/XbaI sites of the pKSII-NK4N plasmid to
generate the pKSII-NK4d8 and the pKSII-NK4d6 plasmids. These plasmids
were digested with NotI, and DNA fragments were subcloned
into NotI site of pRC-CMV expression vector (Invitrogen) to
generate d8 or d6 expression vectors. Expression vector for full-length
NK-4 (NK-4, CMV-NK-4) and reporter plasmids (P1, P1E2m, E2CAT, and
E2mCAT) were described previously (31). The G5EnXCAT reporter plasmid,
which contains SV40 enhancer, was described previously (47). For the
construction of the Groucho expression vector, PCR-amplified cDNAs
were subcloned into the pKSII vector, and the resulting plasmid
(pKS-GRO) was confirmed and used for the construction of the Groucho
expression vector (pCI-GRO) by inserting cDNA into
EcoRI/SalI sites of the pCI vector (Promega). For the construction of the Myc-tagged Groucho expression vector, the
NcoI/XbaI DNA fragment from the pSPUTK-GRO was
subcloned into the pCS3(+)MT expression vector. For the construction of
the GST-NK-4 fusion protein expression vectors, DNA fragments of the
corresponding regions of NK-4 were excised from GAL4-NK-4 fusion
constructs (Fig. 2A) and subcloned into either the
EcoRI site of the pGEX5X-1 plasmid or into the
EcoRI/XbaI sites of the pGEX5X-1Xb plasmid containing an extra XbaI site. For the constructions of
GST-TD and GST-TDm expression vectors, corresponding regions were
amplified (primer 20 and primer 500) from NK4A6 and NK4A6TDm,
respectively, and subcloned into pGEX5X-1. Expression and purification
of the fusion proteins were performed as described previously (31). p300N-(1-670), p300M-(671-1194), and p300C-(1135-2414) plasmids were
described previously (48). For the constructions of the truncated p300
expression plasmids, the NK-4, and the Groucho expression plasmids used
for in vitro translation (Figs. 4 and 5), DNA fragments of
the corresponding regions of p300 and Groucho were amplified by PCR
with specific primers (in the case of construction of the NK-4
expression vector, the corresponding regions of the NK-4 were obtained
from GAL4-NK-4 constructs) and subcloned into the
EcoRI/SalI sites of the pSPUTK vector. Primer
sets used for amplifications are as follows: p300(300-450), primer
p300N1 (5'-GATGAATTCCCCAACATGGGTCAACAGCCA-3') and primer
p300C1 (5'-GATGTCGACGGCAGACTGTTGACCCACCCC-3';
p300(451-670), primer p300N2
(5'-GATGAATTCCCCAACCTAAGCACTGTTAGT-3') and primer p300C2
(5'-GATGTCGACATTCATGGAAACTGGAACCAT-3');
p300(620-1891), primer p300N3
(5'-GATGAATTCCCCTGCGATCTGATGGATGGT-3') and primer p300C3
(5'-GATGTCGACTTGAGTCCTGGGCAAGTAGGG-3'); GRO(1-719), primer GroATG (5'-GATGAATTCATGTATCCCTCACCGGTGCGC-3') and primer
Groterm (5'-GATGTCGACTTAATAAATAACTTCGTAGACAGT-3');
GRO(1-398), primer GroATG and primer 398S
(5'-GATGTCGACATGGAAAGAGTATGCAGGCTT-3'); GRO(1-192), primer
GroATG and primer Gro192S
(5'-GATGTCGACGCGCAATCGCTCCTCGGCGGC-3'); GRO(193-398),
primer Gro193R (5'-GATGAATTCAATTCGGTTTCGCCGGCCGAT-3' and
primer Gro398S; GRO(399-719), primer Gro399R
(5'-GATGAATTCATGAACGGCGAGGGTAGTCTA-3') and primer Groterm.
In Vitro Pull-down Assays and Immunoblot Analysis--
For
pull-down assays, p300, NK-4, and groucho
cDNAs were subcloned into pSPUTK vector (Invitrogen) and subjected
to in vitro translation using the TNT Coupled Reticulocyte
Lysate System (Promega). Pull-down assays were performed by incubating
equal amounts of GST or indicated GST-NK-4 and GST-Groucho fusion
proteins, immobilized onto glutathione-Sepharose beads (Amersham
Pharmacia Biotech), with in vitro translated,
35S-labeled p300, Groucho, and NK-4 proteins. The mixture
was placed on ice for 2 h and washed five times with buffer A (20 mM Tris-HCl, pH 8.0, 150 mM NaCl, 1% Nonidet
P-40), and bound proteins were eluted, separated by 12%
SDS-polyacrylamide gel electrophoresis, and autoradiographed. In the
case of interactions of Groucho with NK-4, precipitates were washed
five times under high stringency conditions (20 mM
Tris-HCl, pH 8.0, 350 mM NaCl, 1% Nonidet P-40). For
immunoblot analysis, any pull-down proteins were separated on a
standard 12% SDS-polyacrylamide gel and transferred to a nylon
membrane (NEN Life Science Products). Filters were prehybridized in
TBST (10 mM Tris-HCl, pH 8.0, 50 mM NaCl,
0.05% Tween 20) containing 5% nonfat dry milk followed by incubation
with either an anti-p300 antibody (4 µg/ml) (Upstate Biotechnology)
or with an anti-Myc antibody (1 µg/ml) (Invitrogen) overnight at
4 °C. After three washes in TBST, secondary horseradish
peroxidase-conjugated antibody (Life Technologies) was added in TBST
containing 5% nonfat dry milk, incubated for 1 h, and then
filters were washed three times in TBST. The signal was detected with
chemiluminescence (Super SignalTM; Pierce).
 |
RESULTS |
NK-4 Can Act as either a Transcriptional Activator or Repressor and
Contains Multiple Functional Domains--
Previously, we showed that
NK-4 is regulated by Twist and autoregulates its own promoter (31). We
further characterized the properties of NK-4 as a transcription factor
using the same reporters (Fig. 1, P1 and
P1E2m) and truncated forms of the NK-4 expression vectors (Fig. 1, d8
and d6). As described previously (31), the P1 reporter contains
NK-4-responsive elements (the E2 cluster) and is activated by NK-4. The
P1E2m reporter contains mutated NK-4 binding sites but otherwise is
exactly the same as the wild-type P1 reporter, which also contains
several weak NK-4 binding sites. As shown in Fig. 1, we found that NK-4
can activate the P1 reporter (6-fold activation, lane
2). In contrast, NK-4 down-regulates the P1E2m reporter gene
(3-fold repression, lane 6). In this case, NK-4
binds to weak binding sites and represses the P1E2m reporter gene.
These results indicate that NK-4 can act either as a transcriptional
activator or repressor, depending on the context of the reporters (P1
or P1E2m). Additionally, we demonstrate that this phenomenon is
dependent on the functional domains of NK-4 (Fig. 1). For example,
deletion of the amino-terminal region of NK-4 (Fig. 1, d8 construct)
abrogates activation of the P1 reporter (Fig. 1, lane
3), indicating that the amino terminus (aa 1-110) of NK-4
is required for transcriptional activation. Indeed, this NK-4 mutant
(d8) represses gene expression of both the P1 and the P1E2m reporter
(Fig. 1, lanes 3 and 7). Further deletion of NK-4 (Fig. 1, construct d6) relieved this repression, irrespective of the reporter gene used (Fig. 1, lanes
4 and 8). These results suggest that the region
following the amino terminus of NK-4 (aa 111-188) is required for the
repressor activity of NK-4. Taken together, these results indicate
that, depending on the context of the target genes (for example P1 or
P1E2m; see lanes 2 and 6), NK-4 can
act as either a transcriptional activator or repressor and that these
different transcriptional activities are dependent on functional
domains of NK-4.

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Fig. 1.
NK-4 can act either as a transcriptional
activator or repressor. CAT activities (average of five sets of
independent experiments) were measured in extracts from cells
cotransfected with the indicated reporter (1 µg per transfection) and
effector plasmids (1 µg per transfection) as described under
"Materials and Methods" (see diagrams at the
top of the figure). In these experiments, the
normalized CAT activity (CAT activities were corrected for transfection
efficiencies by -galactosidase assays), obtained from cotransfection
with a test effector and reporter plasmid (lanes
1-4, P1; lanes 5-8, P1E2m), was
divided by the corresponding value obtained with the indicated reporter
and pRC-CMV (empty vector) and is shown as relative CAT activity.
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In order to define the domains responsible for transcriptional
activation and repression in great detail, various GAL4-NK-4 chimeras
were generated by inserting DNAs coding for different regions of NK-4
into the pSG424 expression vector that contains a heterologous GAL4 DNA
binding domain (Fig. 2A). CAT
activities from cells cotransfected with the indicated plasmids and a
G5BCAT reporter plasmid were measured and compared with activities from cells cotransfected with pSG424 as a control (Fig. 2B). From
this analysis, we found that the amino-terminal region of the NK-4 protein (construct A6, aa 1-110) contains a transcriptional activation domain, which is consistent with results described above (Fig. 1).
Thus, this activation domain functions both in intact NK-4 and in a
fusion form when tethered to the heterologous GAL4 DNA binding domain.
Within this activation domain, the Gln, Asp, and Glu residues are
enriched (24%). Of note is the presence of the TN domain (aa 39-47)
that is well conserved in the NK-2 class homeoproteins (19) and the YYD
tripeptide (aa 14-16) that is similar to the FYD motif that was found
in the activation domains of MyoD, myogenin, and MRF (49). In fact,
deletion of the first 13 amino acid residues within the activation
domain (Fig. 2B, construct A10) did not affect
transcriptional activation. However, further deletion of both the YYD
motif and the TN domain (Fig. 2B, construct A14) markedly
reduced transcriptional activation.

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Fig. 2.
Mapping the transcriptional activation and
repressor domains of NK-4 using GAL4-NK-4 chimeras. A,
schematic diagrams of GAL4-NK-4 chimera and reporters. Various regions
of the NK-4 cDNA (amino acid number is indicated above
the bar) were amplified by PCR and subcloned into the pSG424
expression vector that contains the coding region of the GAL4 DNA
binding domain (aa 1-147) driven by the SV40 promoter and enhancer.
Names of constructs are shown to the left of the schematics.
As a positive control, we used the pGAL4-VP16 expression vector, which
contains a strong activation domain. 5 × GDBS, five copies of GAL4 DNA binding sites;
TATA, E1b TATA box; SV40En, SV40 enhancer;
CAT, chloramphenicol acetyltransferase gene. B,
identification of activation domains. Various GAL4-NK-4 chimeras (1 µg/transfection) were cotransfected with the G5BCAT reporter (1 µg/transfection) into CV1 cells, and CAT activities were measured. In
this series of experiments, the normalized CAT activity obtained from
transfection with a test expression vector was divided by the
corresponding value obtained with pSG424, and -fold activation values
of GAL4-NK-4 chimeras are shown (averages of three sets of independent
experiments). C, identification of repression domains. The
G5EnXCAT reporter (1 µg/transfection) was cotransfected with various
GAL4-NK-4 chimeras (listed on the left) as described above,
and CAT activities were measured. The normalized CAT activity obtained
from transfection with G5EnXCAT and pSG424 was divided by the
corresponding value obtained with a test expression vector, and -fold
repression of the GAL4-NK-4 chimeras is shown (averages of three sets
of independent experiments).
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To map the repressor domain (RD) of NK-4, we constructed the G5EnXCAT
reporter plasmid by inserting the SV40 enhancer into the G5BCAT
reporter (Fig. 2A). The G5EnXCAT reporter alone showed very
high CAT activity so that we could measure the repression activity by
NK-4 more easily. The A1 construct showed strong repressor activity
when cells were cotransfected with the G5EnXCAT reporter (Fig.
2C). Constructs A12 and A18, which contain a deletion of the
activation domain, showed comparable repressor activities (Fig.
2C, lanes A12 and A18,
respectively). Further deletion of NK-4 domains (constructs A19, A2,
A23, and A24) revealed that both the region following the activation
domain (RD, aa 110-188) and the homeodomain (HD) are important for
repressor activity. Interestingly, either domain alone (constructs
A31-A34) showed weak repressor activity. Strong repressor activity,
however, was restored when both domains were combined (constructs A35
and A18). Thus, when fused to the heterologous GAL4 DNA binding domain, these domains (RD and HD) can act as a transcriptional repressor domain. These results are consistent with our observation that deletion
of the RD (Fig. 1, construct d6) caused a loss of repressor activity of
NK-4 and support the idea that the RD is necessary for the repressor
activity of intact NK-4. Within this region (aa 111-188), strong
homology (69% identity) between Drosophila virilis NK-4 (DvNK-4) and NK-4 was
observed.2 Taken together,
these results indicate that NK-4 has both transcriptional activation
and repressor domains.
The Homeodomain Is an Inhibitory Domain--
As described above,
although construct A1 contains a strong activation domain (aa 1-110)
(Fig. 2B, lane A6), it still could not
activate the G5BCAT reporter gene (Fig. 2B, lane
A1). These results suggested that NK-4 contains inhibitory
domains that suppress the transactivation function of NK-4. Since the
homeodomain (in conjunction with the RD) showed repression of reporter
gene expression, we suspected that the homeodomain might provide such
an inhibitory function. In order to explore this possibility, various
constructs were generated by the in-frame fusion of different domains
of NK-4 to construct NK4A6 that contains the activation domain of NK-4
(aa 1-110) (Fig. 3A). As
shown in Fig. 3, the carboxyl-terminal half of NK-4 including the
homeodomain inhibited transactivation (Fig. 3B,
lane 3), and the region containing the NK-4
homeodomain (aa 267-364) fully inhibited the transactivation function
of the activation domain (Fig. 3B, lane
4). Indeed, we found that the NK-4 homeodomain itself is
sufficient to show an inhibitory effect (Fig. 3B,
lane 5). This result is consistent with the
previous reports that the repressor activities of HoxA7 and Msx-1 are
mediated by their homeodomains (50, 51). This phenomenon seems to be a
general characteristic of the homeodomain, since the same effect is
seen with the NK-1 homeodomain (aa 531-628) (Fig. 3B,
lane 6). Also, it has recently been demonstrated
that the Dfd homeodomain masks the Dfd activation function (52). The
mutant NK-4 homeodomain (N
Q mutation in the helix 3 of the
homeodomain) that is defective in binding DNA still showed this
inhibitory effect (Fig. 3B, lane 7),
suggesting that DNA binding is not involved in this inhibition.

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Fig. 3.
The homeodomain is a repressor domain.
A, schematic diagrams showing plasmids used for transient
expression assays. Names of constructs are shown to the left
of the schematics, and mutations are indicated by asterisks.
In the case of constructs containing an HD, either NK-4 or NK-1 is
indicated to the right of the schematic depending on the
gene used for construction. AD, activation domain of NK-4;
VP16, activation domain of the VP16 protein; F A, Phe to Ala mutation; S A, Ser
to Ala mutation. In this series of experiments (Fig. 3,
B-D), cells were transfected with G5BCAT reporter plasmid
and indicated effector plasmid, and CAT activity (averages of three
sets of independent experiments) was measured as described in the
legend to Fig. 2B. B, the homeodomain itself is a
repressor domain. Results (lanes 4-6) show that either the
NK-4 or NK-1 homeodomain can inhibit transactivation of the NK-4
activation domain, which is independent of DNA binding of the
homeodomain (lane 7). C, mutation in
the TN domain does not affect the repressor activity of the homeodomain
(lanes 4-6). D, mutation in the helix
1 region of the homeodomain partially relieves the repressor activity
of the homeodomain (lane 4). Results
(lanes 6-8) also show that fusion of the
homeodomain to the VP16 activation domain also inhibited the
transactivation function of VP16. Effector plasmids used for
cotransfection are indicated below each lane.
E, GST pull-down assays showing that the TN domain interacts
with the homeodomain. In vitro 35S-labeled NK-4
homeodomain (NK4HD; aa 297-364) was subjected to GST
pull-down assays (upper panel) with
glutathione-Sepharose-bound GST-TD (lane 3) or
GST-TDm (lane 4). GST fusion proteins that were
used for the GST pull-down assays are shown in the lower
panel. Input samples (lane 1)
contained 5% of the amount used for binding. GST, negative control
with glutathione-Sepharose-bound glutathione S-transferase
protein (lane 2).
|
|
Other transcription factors such as ATF-2 also showed inhibition of
transactivation by their DNA binding domains (53, 54). For example, the
bZIP DNA-binding domain of ATF-2 suppresses the activation region by an
intramolecular interaction, and the inhibition observed is activation
domain-specific (53). We found that the amino terminus of NK-4 (aa
1-53) that contains the TN domain showed weak interaction with the
NK-4 homeodomain (Fig. 3E, lane 3). Thus, one possible explanation for this inhibition is that the homeodomain can interact intramolecularly with the activation domain
and could mask the transactivation function. To test this possibility,
we generated the construct NK4A6TDm (Fig. 3A), which has a
point mutation within the TN domain (Phe
Ala mutation). This
mutation inhibits interaction between the TN domain and the homeodomain
(Fig. 3E, lane 4). However, this
construct still showed strong transactivation (Fig. 3C,
lane 3), and the transactivation was inhibited by
the homeodomain as efficiently as the wild type (Fig. 3C,
lanes 4-6). Moreover, we found that the
homeodomain can also suppress the transactivation function of VP16
(Fig. 3D, lanes 6-8). These results
suggest that the inhibitory function of the homeodomain is not
activation domain-specific and may not be caused by intra-molecular
interaction. Rather, these results imply that the homeodomain itself
might be a repressor domain that may directly serve as a
protein-protein binding interface with a co-repressor complex or with
the basal transcription machinery. Consistent with this notion, the
homeodomains of both HoxA7 and Msx-1 showed repression activity,
specifically through residues in the N-terminal arm of the homeodomain,
and the Msx-1 homeodomain interacts with the TATA binding proteins (50,
51). It is of interest to note that one hypomorphic allele of the
even-skipped homeoprotein containing a mutation at a residue
in the amino-terminal arm (Thr-residue at the ninth position of the
homeodomain) was reported (55). Since this residue (either Thr or Ser)
is highly conserved in the homeodomains of known homeodomain proteins
(18), we mutated this residue in the NK-4 homeodomain and tested its effect on the inhibitory effect of the homeodomain (Fig.
3A). Interestingly, we observed that this point mutation (S
A mutation) partially relieved the inhibitory effect (Fig.
3D, lane 4). We do not know how this
mutation alleviates the inhibitory effect of the homeodomain, but we
speculate that it may affect protein-protein interaction of the
homeodomain with unknown partner. Taken together, we defined the
homeodomain as a transcriptional inhibitory domain, adding an another
function of the homeodomain in addition to the known DNA and RNA
binding activities (56, 57).
p300 Augments NK-4-mediated Transactivation and Physically
Interacts with NK-4--
It was recently shown that the p300/CBP
coactivator enhances transcription mediated by various transcription
factors including CREB, AP-1, MyoD, and nuclear hormone receptors (58).
Hence, we reasoned that p300 may be required for the transactivation of
homeoproteins as well. In order to explore this possibility, we tested
whether p300 can enhance NK-4-dependent transactivation using transient expression assays. For testing
NK-4-dependent reporter gene activation, two different
reporters containing either the wild-type NK-4 binding sites (E2
elements, E2CAT reporter) that were previously shown to be involved in
autoregulation of NK-4 (31) or mutated NK-4 binding sites (E2m
elements, E2mCAT reporter) were used for transfection. Cells were
cotransfected with NK-4 in the presence (Fig.
4A, lanes
4 and 8) or absence (Fig. 4A,
lanes 2 and 6) of the p300 expression
vector, and CAT activities were measured. As shown in Fig.
4A, co-expression of p300 considerably increased CAT
activity (lane 4) compared with expression of
NK-4 alone (lane 2). However, this coactivation by p300 was not observed with the E2mCAT reporter that lacks
NK-4-responsive elements (Fig. 4A, lane
8), suggesting that p300 enhanced transcriptional activation
mediated by NK-4.

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Fig. 4.
p300-dependent activation of
NK-4. A, coexpression of p300 potentiates activation of
a reporter gene by NK-4. Cells were transfected with the indicated
reporter plasmid (1 µg/transfection) in the absence ( ) or in the
presence (+) of expression vectors (1 µg of NK-4 or 5 µg of p300
per transfection). The normalized CAT activity (average of three sets
of independent experiments) was obtained as described in the legend to
Fig. 3 and is shown as relative CAT activity. The E2CAT reporter
contains wild type NK-4 binding sites, whereas the E2mCAT reporter
contains mutated NK-4 binding sites. B, physical interaction
of NK-4 with p300. HeLa cell nuclear extracts (HeLaNE) were
mixed with various GST-NK-4 fusion proteins (lanes 3-5)
bound to Glutathione-Sepharose beads, and the co-precipitated p300 was
separated on SDS-PAGE and detected by Western blot analysis with an
anti-p300 antibody. Lane 1 (HeLaNE)
contained 5% of the amounts used for binding. The major band is
indicated by an arrow. C, mapping the NK-4
interaction domain of p300. In vitro pull-down assays were
performed with different in vitro 35S-labeled
p300 proteins and glutathione-Sepharose-bound GST-NK-4. After washing,
bound proteins were resolved by SDS-PAGE and autoradiographed. Input
samples contained 5% of the amount used for binding. GST,
negative control with glutathione-Sepharose-bound glutathione
S-transferase protein; NK-4, pull-down assays
with glutathione-Sepharose-bound GST-NK-4. Numbers in
parentheses indicate amino acid residues of the coding
region used for expression of the proteins. D, schematic
diagram of p300 showing interaction domains with NK-4 and other
transcription factors. Regions of p300 used for pull-down assays with
NK-4 are indicated below the diagram, and NK-4
binding is shown. +, weak interaction; ++, strong interaction; , no
interaction. Numbers indicate amino acid residues. Other
classes of transcription factors that showed interaction with p300
previously are indicated above the diagram.
Bromo, bromodomain; C/H3, C/H3 domain.
|
|
Next, we tested whether NK-4 can physically interact with p300. To this
end, HeLa nuclear extracts were mixed with various GST-NK-4 proteins
bound to glutathione-Sepharose beads, and any co-precipitated p300 was
separated on SDS-PAGE and detected by Western blot analysis with an
anti-p300 antibody. As shown in Fig. 4B, the p300 protein
can bind to the full-length NK-4 protein (lane 3)
and binds more strongly to the amino-terminal half of NK-4
(lane 4), which includes an activation domain.
p300 also interacted weakly with the carboxyl-terminal half of NK-4
that contains the homeodomain (Fig. 4B, lane
5).
To delineate the NK-4 binding domains of p300, in vitro
translated (35S-labeled) p300 was subjected to in
vitro pull-down assays with the GST-NK-4 (aa 1-416) protein (Fig.
4C, lanes 1-9). Full-length NK-4
strongly binds to p300C (aa 1135-2414) that contains the carboxyl-terminal half of p300 (Fig. 4C, lane
9). NK-4 also binds weakly to p300N (aa 1-670) (Fig.
4C, lane 3) but not to p300M (aa
671-1194) (Fig. 4C, lane 6). Indeed,
further delineation of the NK-4 binding domains of p300 using the
truncated GST-NK-4 (aa 1-264) (Fig. 4C, lanes
10-18) revealed that the C/H3 region (aa 1620-1891) of the
p300 is important for strong interaction with NK-4 (Fig. 4C,
lane 18). Both p300 (aa 300-450) and p300 (aa
451-670), which include the C/H1 and the KIX domain, respectively, also weakly interact with GST-NK-4 (aa 1-264) (Fig. 4C,
lanes 12 and 15). Fig. 4D
shows the NK-4-binding domains for p300 along with the binding domains
of p300 for other transcription factors. Taken together, these results
indicate that p300 interacts with NK-4 and augments NK-4-mediated transactivation.
Functional Interaction of NK-4 with the Groucho
Corepressor--
As described above, NK-4 can act as an active
transcriptional repressor (Fig. 1) for which the homeodomain is
required (Fig. 2C and Fig. 3). As is the case for other
active transcriptional repressors, NK-4 may recruit corepressors for
its repression activity. Groucho proteins are well-known corepressors
that are required for transcriptional repression by several distinct
types of active transcriptional repressors (59). Among homeodomain
proteins that act as transcriptional repressors, Engrailed was recently shown to interact with Groucho (60, 61). Like NK-4 and NK-3, Engrailed
also contains the eh-1 domain, which is similar to the TN domain.
Hence, we tested whether Groucho can act as a corepressor for NK-4.
As shown in Fig. 5A,
coexpression of Groucho greatly enhanced the repressor activity of
GAL4-NK-4 (lanes 6-8), whereas the effect of
Groucho on GAL4 alone was negligible (lanes
2-4), suggesting that Groucho may act as a transcriptional
corepressor for NK-4. In order to test whether NK-4 can directly
interact with Groucho, we transfected cells with the Myc-tagged Groucho
expression vector. Nuclear extracts from transfected cells were mixed
with a GST-NK-4 protein bound to glutathione-Sepharose beads, and any
co-precipitated Groucho was separated on SDS-PAGE and detected by
Western blot analysis with an anti-Myc antibody. As shown in Fig.
5B, Groucho protein can bind to the full-length NK-4
protein.

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Fig. 5.
Interaction of NK-4 with the Groucho
corepressor. A, Groucho enhances the repressor activity
of GAL4-NK-4. Cells were cotransfected with the G5EnXCAT reporter and
the indicated expression vector (0.5 µg each) in the presence of
increasing amounts of Groucho expression vector (GRO;
lanes 2 and 6, 0.5 µg/transfection;
lanes 3 and 7, 1 µg/transfection;
lanes 4 and 8, 2 µg/transfection),
and CAT activities were measured. The normalized CAT activity obtained
from transfection with G5EnXCAT and pSG424 (GAL4 alone) was divided by
the corresponding value obtained with a test expression vector, and
-fold repression of the GAL4 and GAL4-NK-4 by Groucho is shown
(averages of three sets of independent experiments). B,
physical interaction of NK-4 with the Groucho corepressor. Cells were
transfected with a Myc-tagged Groucho expression vector. Nuclear
extracts were prepared and mixed with GST-NK-4 fusion protein
(lane 3) or GST alone as control (lane
2) bound to glutathione-Sepharose beads. The co-precipitated
Myc-Groucho (GRO) was separated on SDS-PAGE and detected by Western
blot analysis with anti-Myc antibody. Lane 1 (Input)
contained 4% (20 µg) of the amounts used for binding. C,
analysis of NK-4-interaction domain of Groucho. The GST-NK-4
(NK4, aa 1-416) was expressed, bound to
glutathione-Sepharose beads, and subjected to pull-down assays with
in vitro translated, 35S-labeled various Groucho
protein. Numbers indicate amino acid positions of the coding
region used for in vitro translation. Input samples
contained 5% of the amount used for binding. A schematic diagram of
Groucho indicating interaction domains with NK-4 is shown in the
lower panel. Regions of Groucho used for
pull-down assays with NK-4 are indicated below the
diagram, and NK-4 binding (+, interaction; , no
interaction) is shown. Numbers indicate amino acid residues.
Q, GP, and SP, glutamine-rich, glycine
and proline-rich, and serine and proline-rich regions, respectively;
WD, WD motif. D, mapping Groucho interaction
domain of NK-4. In vitro pull-down assays were performed
with different in vitro 35S-labeled NK-4
proteins and glutathione-Sepharose-bound GST-GRO (GRO, aa
1-719). Input samples contained 5% of the amount used for binding.
The lower panel shows a schematic diagram of NK-4
indicating interaction domains with Groucho. TN, TN domain;
+, weak interaction; ++, strong interaction.
|
|
Using full-length NK-4 and various in vitro translated
Groucho proteins, we mapped the NK-4-binding domain of Groucho (Fig. 5C). Indeed, NK-4 can bind efficiently to the full-length
Groucho protein (Fig. 5C, lane 3).
Also, we found that the amino-terminal region of the Groucho protein
(residues 1-192) is required for the interaction with NK-4 (Fig.
5C, lane 9). The WD repeat region does
not show any interaction with NK-4 under high stringency washing
conditions (Fig. 5C, lanes 13-15).
Next, we further delineated the Groucho-binding domains of NK-4 using
in vitro pull-down assays with a variety of in
vitro translated NK-4 and GST-Groucho(1-719). As expected,
Groucho can bind strongly to full-length NK-4 (Fig. 5D,
lane 3). Deletion of either the RD (construct
188-416) or the homeodomain (construct 1-267) significantly weakened
the binding of NK-4 to Groucho (Fig. 5D, lanes
9 and 12). Also, whereas the construct (110-364)
containing both the RD and the homeodomain showed a strong interaction
with Groucho (Fig. 5D, lane 27),
constructs containing either the homeodomain or the RD showed weak
interaction with Groucho (Fig. 5D, lanes
24 and 21) Thus, for a strong interaction of NK-4
with Groucho, both the RD and the homeodomain are required, which is
consistent with the result that both the RD and the homeodomain are
required for the strong repressor activity of NK-4 when fused to the
heterologous GAL4 DNA binding domain (Fig. 2C).
Interestingly, deletion of the TN domain (construct 46-416) does not
affect NK-4 binding to Groucho (Fig. 5D, lane
6). Taken together, the data show that Groucho directly
interacts with NK-4 and enhances NK-4-mediated repression, suggesting
that Groucho can act as a corepressor for NK-4.
 |
DISCUSSION |
NK-4 plays a key role in cardiogenesis (19), yet the regulatory
mechanisms of gene transcription by NK-4 are poorly understood. In the
present study, we have characterized functional domains of NK-4 that
are required for transcriptional activity of NK-4. Our results indicate
that NK-4 can act either as a transcriptional activator or repressor
that utilizes separate functional domains. Furthermore, we provide the
first evidence of NK-4 interactions with the p300 coactivator and the
Groucho corepressor.
Other classes of transcription factors recruit coactivators for their
transcriptional activation (58), and coactivators have been shown to
form a multimeric activation complex with P/CAF and p300/CBP (62, 63).
As a potential coactivator for the NK-4 homeoprotein, we have
demonstrated that p300 augments NK-4-mediated transcriptional
activation in cultured cells (Fig. 4A). Consistent with
these data, expression of viral protein E1A alleviated this effect,2 and p300 physically interacted with NK-4
both in vivo and in vitro (Fig. 4, B and
C). These results support the notion that p300 can act as a
coactivator for homeoproteins. The interaction of p300 with NK-4 is
mediated by common domains of p300, such as C/H3, which was shown to
act as binding sites for many other transcription factors, including
viral proteins (Fig. 4D) (58). Thus, there may be a
competition between NK-4 and other factors for binding to p300. It has
recently been shown that the Drosophila CBP can act as a
coactivator of Ci, a transcription factor homologous to the Gli family
of proteins (64), and that Drosophila CBP is necessary for
Dorsal-mediated activation of the twi promoter (65). These
results indicate a common role for CBP as a coactivator of different
transcription factors and suggest that the Drosophila CBP/p300 may also act as a coactivator for homeoproteins during Drosophila embryogenesis. Nevertheless, it is still
conceivable that homeoproteins may also recruit specific coactivators
for their transactivation function, because CBP/p300 represents a common coactivator that is required in addition to distinct
coactivators for the function of different classes of transcription
factors in mammals (66). Thus, it will be interesting to see whether specific coactivators of homeodomain transcription factors exist.
Groucho proteins can act as corepressors for specific active repressors
such as Hairy-related proteins and Runt domain proteins (59, 60). For
the interactions between Groucho and these class repressors, the WD
repeat region of Groucho and the four-amino acid WRPW (WRPY) motif of
repressors are important (67). As shown in Fig. 5, we have demonstrated
that Groucho enhances the repressor activity of NK-4 and directly
interacts with NK-4. These results suggest that Groucho can act as
corepressor for NK-4. Furthermore, we found that Groucho can act as a
corepressor for NK-3.3 In
both cases, the homeodomain is required for the strong interaction with
Groucho (Fig. 5C). The WD repeat domain of Groucho appears not to be important for the interaction with NK-4 under our
experimental conditions (Fig. 5D). Instead, the
amino-terminal region of Groucho, which was assigned to a
transcriptional repressor domain, is required for the interaction (Fig.
5D). The Engrailed homeodomain protein also interacts with
Groucho (61) via the eh1 domain, which is related to the TN domain of
the NK-2 class. However, the deletion of the TN domain from the NK-3
and NK-4 proteins does not affect interactions with Groucho. Thus, NK
class homeodomain proteins have a unique feature in this sense,
suggesting a different regulatory role for the TN domain in
protein-protein interaction. We have recently shown that the NK class
of homeoproteins can interact with homeodomain-interacting protein
kinases (HIPKs) that can act as co-repressors of homeoproteins (47).
Indeed, we found that homeodomain-interacting protein kinases (HIPKs)
also interact with the Groucho corepressor.3
We have demonstrated that NK-4 can act either as a transcriptional
activator or repressor by recruiting the p300 coactivator and the
Groucho corepressor, respectively. It was recently shown that Dorsal,
which plays an important role for the body axis formation of
Drosophila, recruits Drosophila CBP and Groucho
for its transcriptional activity (65, 68). Thus, our results raise one
interesting question as to how NK-4 can be switched from a
transcriptional activator to repressor. As shown in Fig.
6, the context of the target gene
promoter could be critical for determining whether activation or
repression occur. For example, Dorsal can interact with Twist for the
activation of the target gene (69), whereas DSP1, an HMG-like protein,
can switch a Dorsal activator to a transcriptional repressor (70).
Likewise, NK-4 may interact with other cofactors, thereby acting as
either an activator or repressor. As was seen in the D-mef-2
activation in cardial cells, a GATA site binding factor collaborates
with NK-4 (37, 42). Also, we found that NK-4 can interact with other
transcription factors such as Twist and NK-3 in cultured
cells.4 Thus, it is
conceivable that, depending on gene promoters that contain different
cis-acting regulatory elements, NK-4 can interact with other cofactors,
thereby providing different protein-binding interfaces to recruit
either coactivator or corepressor complexes. Since a corepressor
complex often contains histone deacetylase activity (71), it will be of
great interest to see whether the NK-4 homeodomain transcription
factor, which interacts with the Groucho corepressor, recruits histone
deacetylases.

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Fig. 6.
Schematic diagram showing the possible
regulation mechanism of gene transcription by NK-4. For activation
of a target gene, NK-4 recruits p300 coactivator (p300),
whereas NK-4 recruits the Groucho corepressor (GRO) for its
repression of a target gene. Target gene selection of NK-4 for either
activation or repression may require additional cofactors such as Twist
(Act, activator) and NK-3 (Rep, repressor).
|
|
 |
ACKNOWLEDGEMENTS |
We are grateful to Drs. Robert Adelstein and
Marshall Nirenberg for continuous support during this study. We
gratefully acknowledge the generous gifts of reagents from B. Patterson, Y. Nakatani, and M. Ptashne.
 |
FOOTNOTES |
*
This work was supported by a grant from the NHLBI Intramural
Research Program (to Y. K.), a grant from the Genetic Engineering Research Program of the Korean Ministry of Education (Grant GE-7-9) (to
T. P.), and grants from the Muscular Dystrophy Association and
National Institutes of Health (to R. A. S.).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
Present address: Molecular Biology Laboratory, Institute for
Medical Sciences, Ajou University, Suwon 442-149, Korea.
**
To whom correspondence should be addressed: Bldg. 10 Rm. 8N228,
LMC, NHLBI, NIH, 10 Center Dr. MSC1762, Bethesda, MD 20892-1762. Tel.:
301-496-3672; Fax: 301-402-1542; E-mail: yongsok@helix.nih.gov.
2
C. Y. Choi, Y. H. Kim, and Y. Kim,
unpublished results.
3
Choi, C. Y., Kim, Y. H., Kwon, H. J., and Kim,
Y. (1999) J. Biol. Chem., in press.
4
C. Y. Choi, K. Gajewski, R. A. Schulz,
and Y. Kim, manuscript in preparation.
 |
ABBREVIATIONS |
The abbreviations used are:
PCR, polymerase
chain reaction;
CAT, chloramphenicol acetyltransferase;
GRO, Groucho;
GST, glutathione S-transferase;
bp, base pair;
aa, amino acid(s);
RD, repressor domain;
HD, homeodomain;
PAGE, polyacrylamide
gel electrophoresis;
TN, Tinman.
 |
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