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J Biol Chem, Vol. 274, Issue 45, 32396-32401, November 5, 1999


Accumulation of Pre-apocytochrome f in a Synechocystis sp. PCC 6803 Mutant Impaired in Cytochrome c Maturation*

Martin Tichy and Wim VermaasDagger

From the Department of Plant Biology and Center for the Study of Early Events in Photosynthesis, Arizona State University, Tempe, Arizona 85287-1601

    ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

Cytochrome c maturation involves heme transport and covalent attachment of heme to the apoprotein. The 5' end of the ccsB gene, which is involved in the maturation process and resembles the ccs1 gene from Chlamydomonas reinhardtii, was replaced by a chloramphenicol resistance cartridge in the cyanobacterium Synechocystis sp. PCC 6803. The resulting Delta (M1-A24) mutant lacking the first 24 ccsB codons grew only under anaerobic conditions. The mutant retained about 20% of the wild-type amount of processed cytochrome f with heme attached, apparently assembled in a functional cytochrome b6f complex. Moreover, the mutant accumulated unprocessed apocytochrome f in its membrane fraction. A pseudorevertant was isolated that regained the ability to grow under aerobic conditions. The locus of the second-site mutation was mapped to ccsB, and the mutation resulted in the formation of a new potential start codon in the intergenic region, between the chloramphenicol resistance marker and ccsB, in frame with the remaining part of ccsB. In this pseudorevertant the amount of holocyt f increased, whereas that of unprocessed apocytochrome f decreased. We suggest that the original deletion mutant Delta (M1-A24) expresses an N-terminally truncated version of the protein. The stable accumulation of unprocessed apocytochrome f in membranes of the Delta (M1-A24) mutant may be explained by its association with truncated and only partially functional CcsB protein resulting in protection from degradation. Our attempt to delete the first 244 codons of ccsB in Synechocystis sp. PCC 6803 was not successful, suggesting that this would lead to a lack of functional cytochrome b6f complex. The results suggest that the CcsB protein is an apocytochrome chaperone, which together with CcsA may constitute part of cytochrome c lyase.

    INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

In c-type cytochromes, the heme group is covalently bound to the conserved CXXCH motif of the apoprotein in a process called cytochrome (cyt)1 c maturation (1, 2). This posttranslational process involves heme and apocytochrome transport from the cytoplasm into the periplasm in bacteria, into the intermembrane space in mitochondria, or into the thylakoid lumen in chloroplasts and cyanobacteria, followed by heme attachment to apocytochrome. Remarkably, three separate pathways of maturation of c-type cytochromes evolved among various organisms (1-5).

For Saccharomyces cerevisiae and animal mitochondria only one type of protein, the cyt c lyase, has been shown to be essential for the heme attachment step (6, 7). The lyase was shown to interact directly with both heme (8) and apocytochrome (9), and therefore it is assumed to function in the catalysis of thioether bond formation between heme and cysteine residues of apocytochrome.

In contrast to yeast mitochondria, mutational analysis of Gram-negative bacteria implicated about ten genes in assembly of both soluble and membrane-associated c-type cytochromes. In Escherichia coli, eight of the genes required for cyt c maturation are organized in an operon (10). The gene products involved can be divided into several subprocesses: (a) heme delivery, (b) transfer of reducing power from the cytoplasm to the periplasm, and (c) proper heme attachment. Bacterial c-type apocytochromes are normally synthesized with an N-terminal signal sequence that is recognized by the Sec system for protein translocation across the membrane and by the signal peptidase for processing (11).

The cytochrome c biosynthesis pathway in chloroplasts, cyanobacteria and Gram-positive bacteria is more obscure (5, 12, 13). Only three genes have been identified thus far to be required for cyt c maturation. Functionally, the pathways in chloroplasts and Gram-negative systems are very similar and cyanobacterial cytochromes can be functionally assembled in E. coli (14). However, obvious sequence similarities between the components of the two systems are limited to one putative cytochrome binding site (15) and a protein involved in transfer of reducing power across the membrane (16). In Chlamydomonas reinhardtii, the chloroplast-encoded ccsA gene (15) and a nuclear-encoded ccs1 gene (17) were identified as indispensable for heme attachment. The CcsA and Ccs1 proteins were suggested to function together in a complex, as inactivation of either of the two genes leads to deficiency in both proteins (1, 5). In some systems heme attachment can proceed spontaneously (18-20). This implies that components of the cyt c maturation pathways may not be directly involved in the formation of thioether bonds but rather in bringing together both substrates in the right conformation and in the correct redox state so that heme attachment can occur.

This paper describes characterization of a Synechocystis sp. PCC 6803 mutant carrying a 5' deletion of the open reading frame slr2087 (nomenclature according to CyanoBase), which is similar to ccs1 and which we have named ccsB. Moreover, an attempt is reported to inactivate a much larger portion of slr2087 as well as sll1513, coding for CcsA.

    EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

Growth Conditions-- Wild type and mutants of Synechocystis sp. PCC 6803 were grown in liquid BG-11 medium (21) at 30 °C at 40 µE/m2·s on a rotary shaker. Strains were grown with 5 mM glucose unless photoautotrophic conditions are indicated. For anaerobic growth, the strains were grown in a 1% CO2, 99% N2 atmosphere.

Oxygen Evolution-- Oxygen evolution was measured as described earlier (22) using a Clark-type electrode in the presence of 1 mM K3Fe(CN)6 and 0.1 mM dimethyl-p-benzoquinone (DMBQ) for PS II activity, or 10 mM NaHCO3 for whole chain electron transport.

Fluorescence Measurements-- Chlorophyll a fluorescence induction and decay were detected with a Walz pulse-amplitude-modulation fluorometer and recorded using the program FIP (QA Data, Turku, Finland). Actinic illumination came from a pulse-amplitude-modulation 102 L LED lamp. For fluorescence induction 1 µM 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone (DBMIB) was added where indicated. Fluorescence decay was measured after 3 s of actinic illumination.

Preparation of Cell Extracts and Thylakoid Membranes and SDS-Polyacrylamide Gel Electrophoresis-- Cells in late exponential phase were pelleted and were resuspended in thylakoid buffer (1/100 of the original culture volume) containing 50 mM MES/NaOH, pH 6.0, 5 mM MgCl2, 5 mM CaCl2, and 10% glycerol (v/v). Cell suspensions (0.7 ml) were transferred to 2-ml microcentrifuge tubes, mixed with an equal volume of glass beads (90-µm diameter), and kept on ice. The cells were broken in a MiniBeadBeater. The homogenate was centrifuged in a microcentrifuge at 14,000 rpm for 10 min at 4 °C. The supernatant represents the soluble cell fraction; the pelleted thylakoids were resuspended in the original volume of thylakoid buffer.

Proteins were separated by SDS-polyacrylamide gel electrophoresis without urea. A 15% polyacrylamide gel (a 15-20% gradient gel for detection of cyt c553) was used for separation; the stacking gel was 5.5% polyacrylamide. Samples were solubilized in sample buffer at room temperature for 15 min before loading on the gel. A total of 50 µg of protein was loaded per lane.

Western Blotting and Heme Staining-- After electrophoresis, proteins were transferred to polyvinylidene fluoride membrane (MSI, Westboro, MA) using the Bio-Rad Trans-Blot system. Blotted membranes were subjected to immunoblot analysis using antibodies against cyt f, cyt b6, Rieske, and subunit IV (1:1,000 dilution). Bound primary antibody was detected with an alkaline phosphatase-conjugated secondary antibody. Antibodies were gifts from A. Barkan (University of Oregon, Eugene, OR) (raised against maize Rieske and cyt f) and R. Malkin (University of California, Berkeley, CA) (raised against spinach cyt f, cyt b6, and subunit IV).

Gels were stained for cytochromes using the heme staining procedure with 3,3',5,5'-tetramethylbenzidine and H2O2 (23). Alternatively, cytochromes were identified on membranes after transfer by a heme staining procedure using enhanced chemiluminescence (17).

    RESULTS
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

Gene Nomenclature-- In this paper a unified nomenclature of ccs (c-type cytochrome synthesis) genes will be used that is appropriate for organisms using the chloroplast/cyanobacterial pathway of cyt c maturation. A ccm (cyt c maturation) nomenclature has been proposed for organisms using the pathway of Gram-negative bacteria (10). As shown in Table I the current nomenclature of genes involved in cyt c maturation in chloroplast, cyanobacteria, and Gram-positive bacteria is very different for different organisms. In this paper, ccsA will refer to the cyanobacterial homologue of the ccsA gene of C. reinhardtii; ccsB will denote the Synechocystis sp. PCC 6803 homologue of C. reinhardtii Ccs1, whose product is thought to form a complex with CcsA; last, ccsC will denote the two putative Synechocystis sp. PCC 6803 genes homologous to Bacillus subtilis ccdA, which codes for the protein suggested to be involved in the transfer of reducing power across the membrane.

                              
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Table I
Genes coding for components implicated in the cytochrome c maturation in cyanobacteria (Synechocystis sp. PCC 6803), chloroplasts (from C. reinhardtii and Porphyra purpurea), and Gram-positive bacteria (Mycobacterium leprae and B. subtilis)

Generation of the ccsB Mutants-- The Synechocystis sp. PCC 6803 ccsB (slr2087) gene was identified by its similarity to Ccs1 from C. reinhardtii (38% identity at the protein sequence level). Two deletion mutants were generated. In the first mutant, a chloramphenicol resistance marker (1.5 kilobases) from pACYC184 was introduced around the translation start site of ccsB, replacing the region between the NaeI site 53-bp upstream from the translation start site and the BglII site 72-bp downstream of the translation start site of the 1,374-bp-long ccsB gene. This mutant will be referred as Delta (M1-A24), the name reflecting the amino acids that have been deleted. In the second mutant, Delta (M1-I244), the deleted region was between the BclI sites 82-bp upstream and 732-bp downstream of the translation start site of the ccsB gene. Interestingly, the phenotypes of both mutants were different. The Delta (M1-A24) transformant did not segregate its wild type and mutant genome copies when grown under ambient aerobic conditions (data not shown), but segregation was obtained easily under anaerobic conditions. Synechocystis sp. PCC 6803 contains multiple genome copies per cell, and lack of segregation of wild-type and mutant gene copies in the presence of high concentrations of a selectable marker usually indicates that the presence of the particular gene that is attempted to be deleted is indispensable for cell survival. Segregation of the Delta (M1-A24) mutant was checked by PCR (Fig. 1). However, we were unable to segregate the Delta (M1-I244) mutant in both aerobic and anaerobic conditions (data not shown). However, the partially segregated Delta (M1-I244) mutant also appeared to be oxygen sensitive. As the Delta (M1-I244) mutant did not segregate, the corresponding transformant was not characterized further.


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Fig. 1.   PCR analysis of the ccsB locus in the wild type and in the Delta (M1-A24) mutant. The Delta (M1-A24) mutant was generated by replacement of the 125-bp NaeI-BglII fragment around the translation start of the ccsB gene by a chloramphenicol resistance marker (1.5 kbp). PCR primers were chosen to lead to a 1.4-kbp fragment in the wild type and to a 2.8-kbp fragment in the segregated Delta (M1-A24) mutant.

Delta (M1-A24) Mutant Characterization-- Consistent with the conditions necessary for segregation, the Delta (M1-A24) mutant depended on anaerobic conditions for growth. As shown in Table II, under anaerobic conditions the Delta (M1-A24) mutant grew photoautotrophically at a rate about two-thirds that of wild type. Interestingly, the Delta (M1-A24) mutant grew in air if PS II was deleted or inhibited by atrazine (Table II).

                              
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Table II
Aerobic and anaerobic growth of wild type and the Delta (M1-A24) mutant in the presence or absence of PS II
Doubling time (h) of the wild type and of mutants lacking PS II and/or intact ccsB grown photoautotrophically (PA) or photomixotrophically/photoheterotrophically (PM/PH) were measured in the presence of 5 mM glucose. Where indicated, 20 µM atrazine was added.

When exposed to oxygen, the Delta (M1-A24) mutant cultures continued to grow for about 20 h, followed by an inhibition of further growth (data not shown). The growth rate of wild-type cells was similar in both aerobic and anaerobic conditions (Table II). However after several days of exposure to oxygen, the mutant culture started to grow again when it was returned to anaerobic conditions. Therefore, oxygen did not kill the Delta (M1-A24) mutant strain, but it prevented its growth.

Inactivation of the ccsB homologue in C. reinhardtii led to a nonphotosynthetic phenotype and to a cyt b6f deficiency (17). Therefore, it was important to determine whether the Delta (M1-A24) mutant of Synechocystis sp. PCC 6803 is also impaired in photosynthetic electron transport through the cyt b6f complex. For this reason, oxygen evolution rates of the Delta (M1-A24) mutant and wild type were measured, and the rate of electron transport through PS II to the artificial electron acceptor DMBQ (which can oxidize the plastoquinone pool) was compared with that of whole-chain electron transport to CO2 (Table III). The two rates were similar for wild type, but the rate of whole-chain electron transport in the Delta (M1-A24) mutant was about 5-fold lower than electron transfer involving only PS II. This indicates that photosynthetic electron transport was blocked beyond PS II and is consistent with an inhibition at the level of the cyt b6f complex.

                              
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Table III
Photosynthetic electron transport in wild type and the Delta (M1-A24) mutant
Strains were grown anaerobically before the measurements. Data shown are the average of three experiments and were reproducible within 15% of the average rate.

A similar conclusion was drawn from chlorophyll fluorescence induction and decay measurements in the Delta (M1-A24) mutant. Chlorophyll fluorescence increases with reduction of QA in PS II, and reduced QA is oxidized by the plastoquinone pool. If photosynthetic electron transport is blocked at or beyond the cyt b6f complex, oxidation of the plastoquinone pool would be expected to be slower and consequently QA- oxidation after illumination should be slower as well. Indeed, after illumination variable fluorescence in the Delta (M1-A24) mutant decayed with a half-time about 4-fold slower than in wild type, suggestive of slower electron flow out of the plastoquinone pool (Fig. 2A). Fluorescence induction was faster in the mutant than in wild type, indicative of a more rapid net reduction of the plastoquinone pool in the mutant upon illumination (Fig. 2, B and C). In the presence of 1 µM DBMIB (a cyt b6f complex inhibitor), the induction curve of the wild type was very similar to that of the mutant with or without DBMIB, whereas in the mutant, DBMIB barely affected the fluorescence induction curve (Fig. 2, B and C). These data are fully consistent with inhibition at the level of the cyt b6f complex in the Delta (M1-A24) mutant.


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Fig. 2.   Chlorophyll fluorescence decay and induction in wild type and the Delta (M1-A24) mutant. Panel A, decay kinetics of variable fluorescence in intact cells after continuous illumination. Actinic illumination was turned off after a 3 s illumination (indicated by an arrow). Panel B, fluoresence induction of dark adapted cells in the presence or absence of 1 µM DBMIB. Panel C, induction as in panel B but on a shorter time scale. The scale on the y axis is in volts; in panels B and C, the zero levels were offset for better comparison; wild type DBMIB was actually at 0 V, wild type + DBMIB was offset by +0.15 V, Delta (M1-A24)-DBMIB by +0.6 V, and Delta (M1-A24) + DBMIB by +0.75 V.

Processing of cyt f in the Delta (M1-A24) Mutant-- To determine the accumulation of c-type cytochromes and the cyt b6f complex in the Delta (M1-A24) mutant more directly, the amount of cyt b6f complex subunits in thylakoid membranes was monitored using Western blotting and heme staining. In cyanobacteria, several c-type cytochromes are localized on the luminal side of the thylakoid membrane, including cyt f, cyt c553, which is a soluble electron carrier between cyt b6f complex and PS I, and cyt c550, a PS II luminal protein. Unlike in C. reinhardtii, in cyanobacteria the cyt b6f complex appears to be indispensable, possibly because of its role in respiration, making a cyanobacterial mutant completely deficient in this complex unlikely to survive. The Delta (M1-A24) mutant was found to have significantly decreased amounts of cyt f, cyt b6, and cyt c550 in its thylakoids (Fig. 3).


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Fig. 3.   Accumulation of c-type cytochromes in wild type and the Delta (M1-A24) mutant. Thylakoids membranes were isolated, and 50 µg of protein was loaded on a polyacrylamide gel. Proteins were identified by heme staining (A) or by cross-reaction with a cyt f antibody (B).

Surprisingly, in the mutant, a band with decreased mobility was recognized by the cyt f antibody; we assign this band to unprocessed pre-apocyt f. The observed 2-3-kDa difference is consistent with the upper band being the unprocessed protein. This difference in electrophoretic mobility is similar to that between C. reinhardtii pre-apocyt f and apocyt f (24). Even though the upper band accumulated to high levels in thylakoid membranes of the Delta (M1-A24) mutant (Fig. 3), this band was not visible upon heme staining. Therefore, this band does not covalently bind heme. However, the lower band in the mutant corresponding to processed cyt f (about 20% of the wild-type amount) stained with heme at an intensity corresponding to the amount of processed cyt f in the membrane (Fig. 3). This is consistent with the 5-fold reduction in linear electron flow (Table III) and suggests that most or all of the processed cyt f in the mutant carries covalently attached heme.

The other cyt b6f complex subunits, including cyt b6, accumulated to about 20% of the amount in wild type (Fig. 4; note that for wild type, 5-fold less thylakoids were loaded than for the Delta (M1-A24) mutant). In the range of protein concentrations used the immunoreaction observed is approximately proportional to the amount of antigen (not shown). Therefore, the amount of cyt b6, Rieske, and subunit IV polypeptides is proportional to the amount of processed holocyt f and the amount of functional cyt b6f complex. This implies that the unprocessed pre-apocyt f is not part of the cyt b6f complex (Fig. 3).


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Fig. 4.   Levels of c-type cytochromes and subunits of the b6f complex upon aerobic incubation. Thylakoid membranes were isolated from the wild type and the Delta (M1-A24) mutant that had been grown anaerobically and then were transferred to ambient air for 0-70 h as indicated. 50 µg of protein/lane was loaded on a polyacrylamide gel (10 µg for wild type). Proteins were identified immunologically.

As the Delta (M1-A24) mutant ceased to grow in ambient air conditions, we investigated whether the accumulation of the cyt b6f complex changed upon exposure of the mutant strain to air. The amounts of the cyt b6f subunits remained stable for the first 40 h of the experiment (Fig. 4), long after the cells had ceased to grow. Protein degradation was obvious only after 70 h in aerobic conditions (Fig. 4).

Plastocyanin Is Indispensable in the Delta (M1-A24) Mutant-- As the Delta (M1-A24) mutant accumulated some processed cyt f and cyt c550 with heme bound, it was interesting to determine whether cyt c553 is properly synthesized as well. Cyt c553, together with plastocyanin, shuttles electrons from the cyt b6f complex to PS I in Synechocystis sp. PCC 6803. Fig. 5 indicates that in our growth conditions the level of holocyt c553 in wild type is very low. However, upon deletion of the plastocyanin gene (petE) the cyt c553 level increased dramatically. Interestingly, after transformation of the Delta (M1-A24) mutant with a petE deletion construct (25) the resulting petE deletion transformants did not segregate and no holocyt c553 was apparent in the partially segregated mutant (Fig. 5). This suggests that, unlike holocyt f (Fig. 3) and cyt c550, the Delta (M1-A24) mutant is unable to make holocyt c553.


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Fig. 5.   Accumulation of soluble c-type cytochromes in wild type and various mutants. (petE-) indicates that in these strains transformants with a deletion at the petE locus did not segregate. 50 µg of proteins from the soluble fraction was loaded and cytochromes were identified by heme staining using enhanced chemiluminescence.

Supplementation of the Delta (M1-A24) Mutant with Heme and/or Reductant-- Accumulation of the unprocessed pre-apocyt f that lacked covalently bound heme raised the possibility that the Delta (M1-A24) mutant may be deficient in heme transport and reduction. This would be similar to the situation in yeast mitochondria, where heme-deficient mutants accumulate pre-apocyt c1 in vivo (26) and where attachment of the reduced heme was necessary for processing of the cyt c1 in vitro (27, 28). To determine whether the Delta (M1-A24) phenotype could be overcome in part by supplementation of extra heme and/or reductant, Delta (M1-A24) cells were grown on plates with 100 µM hemin and/or in the presence or absence of reductants (up to 1 mM dithiothreitol, L-cysteine, or dithionite). None of these additions led to improved photosynthetic performance, ability to grow at ambient oxygen levels, and changes in accumulation of unprocessed or processed cyt f. This suggests that CcsB is not involved in heme transport and/or reduction.

Pseudorevertants-- Second-site mutants (pseudorevertants) were selected in which the Delta (M1-A24) mutant phenotype was suppressed at least partially. Several pseudorevertants that were able to grow in air were selected. During the initial screening, most of the pseudorevertants were found to be deficient in PS II activity, which is consistent with the data that were presented in Table II. However, one pseudorevertant was photoautotrophic with about 50% of the wild type growth rate under aerobic conditions and with 70% of the whole chain electron transport rate of wild type (data not shown). This pseudorevertant showed an increased accumulation of holocyt f (Fig. 6A) and a decreased but still detectable level of pre-apocyt f (Fig. 6B). Chromosomal DNA from this pseudorevertant complemented the original Delta (M1-A24) strain, using growth at ambient oxygen levels as a selection criterion. Functional complementation was used to localize the second-site mutation. The complementing PCR fragment contained a single point mutation in the noncoding region of the chloramphenicol resistance cassette in between the resistance marker and the remainder of the ccsB gene (Fig. 7A). The mutation (T to G) led to formation of a new putative start codon, CUG, for ccsB, with a Shine-Dalgarno-like sequence upstream. Note that in prokaryotes not only AUG and GUG but also UUG and to a lesser extent CUG have been reported to be able to function as start codons (29). Even though the first part of this modified gene has a random sequence, translation of the modified ccsB gene using the newly generated start codon in the pseudorevertant is expected to lead to a protein of similar length as the wild type copy (Fig. 7B). Moreover, in the original Delta (M1-A24) mutant the sequence upstream of ccsB contains several possible start codons and several possible ribosome binding sites (Fig. 7A) so that shorter forms of CcsB may be expressed even in this mutant.


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Fig. 6.   Accumulation of cyt f in thylakoids of wild type, the Delta (M1-A24) mutant, and the autotrophic pseudorevertant that can grow aerobically. 50 µg of protein was loaded/lane; proteins were identified by heme staining using enhanced chemiluminescence (A) or by crossreaction with a cyt f antibody (B).


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Fig. 7.   The DNA sequence in the ccsB upstream region and deduced N-terminal regions of the CcsB protein in wild type and the photoautotrophic pseudorevertant. A, DNA sequence of the aerobically photoautotrophic pseudorevertant of the Delta (M1-A24) mutant. The pseudorevertant differs from the mutant by a single point mutation (T to G) in the region between the chloramphenicol resistance gene and the remaining portion of ccsB. The ccsB reading frame has been indicated and has been extended to the upstream region. The mutation leads to the creation of a CTG codon (bold), which may serve as start codon. Other potential in-frame initiation codons (GTG, CTG) are in italics, areas resembling Shine-Dalgarno sequences are underlined, and an in-frame stop codon upstream is marked with an asterisk. The arrows indicate the position where the chloramphenicol marker was cloned into ccsB. The part of the ccsB gene coding for the putative membrane spanning region is boxed. B, deduced N-terminal regions of the CcsB protein in wild type and the photoautotrophic pseudorevertant. Three possible translational products from the Delta (M1-A24) mutant are also indicated (CcsB1-B3), starting at potential start codons that have been italicized in panel A. The putative membrane spanning region of CcsB has been boxed.

Inactivation of ccsA-- The Synechocystis sp. PCC 6803 ccsA (sll1513) gene was interrupted by the kanamycin resistance marker from the pUC4K at the BamHI site at position 813 of the coding region of ccsA, yielding the same construct as has been used previously (12). In agreement with previous data (12), this mutant could not be segregated. Unlike for the Delta (M1-A24) mutant, the degree of segregation did not improve in anaerobic conditions. These results suggest that the CcsA protein is indispensable for Synechocystis sp. PCC 6803.

    DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

Accumulation of Cytochromes-- We have generated a Synechocystis sp. PCC 6803 mutant lacking the part of the ccsB gene coding for the first 24 amino acid residues of the corresponding protein. The Delta (M1-A24) mutant grew photoautotrophically in anaerobic conditions, indicating the presence of a functional cyt b6f complex. It exhibited about 20% of the wild-type rate of whole chain electron transport, demonstrating that in Synechocystis sp. PCC 6803 the introduced ccsB partial deletion does not lead to a total lack of the cyt b6f complex. The oxygen evolution and fluorescence induction and decay measurements (Table III, Fig. 2) were consistent with impairment of photosynthetic electron transport beyond the plastoquinone pool in the Delta (M1-A24) mutant. Consistent with a decreased rate of whole chain electron transport, the Delta (M1-A24) mutant accumulated about 20% of holocyt f. In addition, the amount of cyt c550 was very much reduced in the Delta (M1-A24) mutant whereas cyt c553 was undetectable (Fig. 5), indicating that the mutant is impaired in a pathway common to c-type cytochromes.

Stability of Pre-apocyt f-- The observation that unprocessed pre-apocyt f accumulated to high levels in the thylakoid membrane of the Delta (M1-A24) mutant is unparalleled in other cyt c maturation pathways studied. Apocyt c usually is much less stable than its holo-form because of the presence of a periplasmic/luminal degradation system that removes nonfunctional proteins (24, 30). The situation observed in the Synechocystis sp. PCC 6803 Delta (M1-A24) mutant is quite different from that in ccs1/ccsA null mutants of C. reinhardtii. Although in this alga only the ccsA mutant has been characterized thoroughly, the CcsA and CcsB homologues require each other for accumulation in vivo (1, 5), and the ccs1 mutant is expected to have the same phenotype as the ccsA mutant. In the ccsA mutant of C. reinhardtii both apocyt f and apocyt c553 were processed and very unstable with half-lives of about 10 min, suggesting that processing does not depend on heme attachment in this system (24, 31). The fact that the pure Delta (M1-I244) ccsB mutant as well as the ccsA mutant could not be obtained in Synechocystis sp. PCC 6803 suggests a lethal phenotype of these mutations. This corroborates the view that Delta (M1-A24) is not a null mutant for ccsB. The accumulation of unprocessed pre-apocyt f without heme bound in the Delta (M1-A24) mutant of Synechocystis sp. PCC 6803 suggests that the mutant is impaired in both processing and heme attachment. The fact that in the Delta (M1-A24) mutant (a) about 20% of the protein was processed, contained heme, and was assembled into a functional cyt b6f complex, and (b) no heme binding to the unprocessed pre-apocyt f was detected, indicate that processing and heme attachment are closely coordinated in Synechocystis sp. PCC 6803.

The Role of CcsB-- Important insight regarding the function of the CcsB protein and the phenotype of the Delta (M1-A24) mutant was obtained from characterization of the photoautotrophic pseudorevertant, functionally complementing the Delta (M1-A24) mutant. The second-site point mutation was localized in the noncoding region of the chloramphenicol resistance marker upstream of the truncated ccsB gene, and led to the formation of a new putative start codon. This stretch of nucleotides contains several possible start codons and several possible ribosome binding sites in the original Delta (M1-A24) mutant (Fig. 7A) raising the possibility that a shorter and modified form of CcsB is expressed even in the original Delta (M1-A24) mutant. Therefore, we suggest that in the Delta (M1-A24) mutant described here the shorter version of the CcsB protein may accumulate and that accumulation of modified CcsB leads to the accumulation of pre-apocyt f. This argument is strengthened by the fact that the photoautotrophic pseudorevertant but not wild type still accumulates some pre-apocyt f (Fig. 6B). This suggestion explains why the phenotype of the Delta (M1-A24) mutant expressing partially functional CcsB protein is so different from that of ccsA null mutant of C. reinhardtii and why the Delta (M1-A24) mutant but not the mutant Delta (M1-I244) or the ccsA deletion mutant could be generated in Synechocystis sp. PCC 6803. Expression of modified CcsB probably is also the reason for unusual stability of pre-apocyt f in the Delta (M1-A24) mutant. We hypothesize that the reason for accumulation of pre-apocyt f in thylakoid membranes of the Delta (M1-A24) mutant is protection of the apoprotein from processing, heme attachment as well as degradation by the altered CcsB protein. This suggests that in the wild type CcsB also interacts with pre-apocyt c/f polypeptides to aid in processing and heme attachment. In the Delta (M1-A24) mutant the partially active CcsB may still bind the apocytochrome and protect it from degradation; however, in the mutant, processing and heme binding appear to have slowed down considerably. The difference between the Delta (M1-A24) mutant, its photoautotrophic pseudorevertant, and wild type is primarily in the efficiency of processing and heme attachment. This reasoning suggests that pre-apocyt f accumulating in the Delta (M1-A24) mutant is associated with CcsB. This would imply that CcsB accumulates to high levels, at least in the Delta (M1-A24) mutant.

Interestingly, the Delta (M1-A24) mutant needed anaerobic conditions to segregate and to grow. Oxygen sensitivity of the Delta (M1-A24) mutant and tolerance of its pseudorevertant suggests that this phenotype is caused by deficiency of CcsB function in the Delta (M1-A24) mutant. This deficiency may indicate that intact CcsB but not truncated CcsB is able to protect apocyt f and/or heme against oxidation. Interestingly, a potential functional analog of CcsB from Rhodobacter capsulatus, Ccl2, accumulates to 20-fold-higher levels when grown aerobically than when under anaerobic conditions (31). Ccl2 is viewed as a protein reducing apocyt c and protecting it against oxidation, which may explain its accumulation when oxygen is present.

A CcsA-CcsB complex is necesssary for cyt c maturation in chloroplasts and cyanobacteria. CcsA, which has a putative heme binding site on the luminal side of the thylakoid membrane (15, 32), may function as a heme transporter/coordinator. We suggest that CcsB serves as an apocytochrome chaperone, which binds pre-apocyt f and facilitates its processing by signal peptidase and heme attachment by CcsA. Both processing and heme attachment may take place in the CcsA-CcsB complex; both processes must be tightly coordinated as the N-terminal amino acid of the processed cyt f serves as a heme ligand. We propose that the CcsA-CcsB complex is the site of heme attachment, with CcsB binding the apoprotein and with CcsA binding a heme and facilitating its linkage to apocytochrome.

    ACKNOWLEDGEMENTS

We thank Dr. Alice Barkan, University of Oregon, and Dr. Richard Malkin, University of California, Berkeley for providing us with the antibodies used in this study.

    FOOTNOTES

* This research was funded by Grant DE-FG03-95ER20180 from the United States Department of Energy. Financial support by the NASA Astrobiology program during the final stage of this work is gratefully acknowledged.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Dagger To whom correspondence should be addressed: Dept. of Plant Biology, Arizona State University, Box 871601, Tempe, AZ 85287-1601. Tel.: 480-905-3698; Fax: 480-965-6899; E-mail: wim@asu.edu.

    ABBREVIATIONS

The abbreviations used are: cyt, cytochrome; MES, 4-morpholineethanesulfonic acid; DMBQ, dimethyl-p-benzoquinone; bp, base pair(s); kbp, kilobase pair(s); PCR, polymerase chain reaction; DBMIB, 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone; PSII, photosystem II.

    REFERENCES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

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