J Biol Chem, Vol. 274, Issue 47, 33355-33365, November 19, 1999
Catalytic Mechanism of 2-Hydroxybiphenyl 3-Monooxygenase, a
Flavoprotein from Pseudomonas azelaica HBP1*
Winfried A.
Suske
,
Willem J. H.
van Berkel§¶, and
Hans-Peter E.
Kohler
From the
Department of Microbiology, Swiss Federal
Institute of Environmental Sciences and Technology (EAWAG),
CH-8600 Dübendorf and the § Department of
Biomolecular Sciences, Laboratory of Biochemistry, Wageningen
Agricultural University, Dreijenlaan 3,
NL-6703 HA Wageningen, The Netherlands
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ABSTRACT |
2-Hydroxybiphenyl 3-monooxygenase (EC
1.14.13.44) from Pseudomonas azelaica HBP1 is an
FAD-dependent aromatic hydroxylase that catalyzes the
conversion of 2-hydroxybiphenyl to 2,3-dihydroxybiphenyl in the
presence of NADH and oxygen. The catalytic mechanism of this
three-substrate reaction was investigated at 7 °C by stopped-flow absorption spectroscopy. Various individual steps associated with catalysis were readily observed at pH 7.5, the optimum pH for enzyme
turnover. Anaerobic reduction of the free enzyme by NADH is a biphasic
process, most likely reflecting the presence of two distinct enzyme
forms. Binding of 2-hydroxybiphenyl stimulated the rate of enzyme
reduction by NADH by 2 orders of magnitude. The anaerobic reduction of
the enzyme-substrate complex involved the formation of a transient
charge-transfer complex between the reduced flavin and
NAD+. A similar transient intermediate was formed when the
enzyme was complexed with the substrate analog
2-sec-butylphenol or with the non-substrate effector
2,3-dihydroxybiphenyl. Excess NAD+ strongly stabilized the
charge-transfer complexes but did not give rise to the appearance of
any intermediate during the reduction of uncomplexed enzyme. Free
reduced 2-hydroxybiphenyl 3-monooxygenase reacted rapidly with oxygen
to form oxidized enzyme with no appearance of intermediates during this
reaction. In the presence of 2-hydroxybiphenyl, two consecutive
spectral intermediates were observed which were assigned to the flavin
C(4a)-hydroperoxide and the flavin C(4a)-hydroxide, respectively. No
oxygenated flavin intermediates were observed when the enzyme was in
complex with 2,3-dihydroxybiphenyl. Monovalent anions retarded the
dehydration of the flavin C(4a)-hydroxide without stabilization of
additional intermediates. The kinetic data for 2-hydroxybiphenyl
3-monooxygenase are consistent with a ternary complex mechanism in
which the aromatic substrate has strict control in both the reductive
and oxidative half-reaction in a way that reactions leading to
substrate hydroxylation are favored over those leading to the futile
formation of hydrogen peroxide. NAD+ release from the
reduced enzyme-substrate complex is the slowest step in catalysis.
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INTRODUCTION |
2-Hydroxybiphenyl 3-monooxygenase (EC 1.14.13.44) is an inducible
flavoenzyme involved in the degradation of the fungicide 2-hydroxybiphenyl by the soil bacterium Pseudomonas azelaica
HBP1 (1, 2). The microbial degradation of 2-hydroxybiphenyl proceeds through an oxidative meta-cleavage pathway.
2-Hydroxybiphenyl 3-monooxygenase catalyzes the first step of this
pathway, i.e. the ortho-hydroxylation of
2-hydroxybiphenyl to 2,3-dihydroxybiphenyl in the presence of NADH and
oxygen as shown in Scheme 1.
2-Hydroxybiphenyl 3-monooxygenase is a homotetramer, and each 60-kDa
subunit contains a noncovalently bound FAD (2). The enzyme has a unique
substrate specificity as it hydroxylates also 2,2'-dihydroxybiphenyl,
2,5-dihydroxybiphenyl, and a number of 2-alkylphenols to the
corresponding 3-substituted catechols (3, 4). Because of its catalytic
properties the enzyme has successfully been applied as a biocatalyst
for the production of various 3-substituted catechols on the gram scale
(5). The physiological product 2,3-dihydroxybiphenyl is a non-substrate
effector for 2-hydroxybiphenyl 3-monooxygenase stimulating the
nonproductive oxidation of NADH leading to H2O2
(4). Partial uncoupling of flavin reduction from hydroxylation by
certain effectors and even the reaction product is a rather
common feature among flavoprotein aromatic hydroxylases
(6-9).
The gene encoding 2-hydroxybiphenyl 3-monooxygenase from P. azelaica HBP1 has recently been cloned and overexpressed in
Escherichia coli (4). Sequence alignments show that
2-hydroxybiphenyl 3-monooxygenase belongs to the family of flavoprotein
hydroxylases (2). Besides two fingerprints for the FAD binding, these
enzymes share a conserved sequence motif with a putative dual function
in FAD/NAD(P)H binding (10).
The catalytic mechanism of flavoprotein aromatic hydroxylases has
extensively been studied by rapid-reaction techniques. The reaction
cycle (Scheme 2) that was developed for
p-hydroxybenzoate hydroxylase (11-13) also holds for a wide
range of other flavoprotein aromatic hydroxylases (14-21). One of the
most characteristic features of the flavoprotein aromatic hydroxylases
is the control function of the aromatic substrate over the reduction of
the flavin by NAD(P)H (6, 22, 23). Once a ternary complex of the
enzyme-bound flavin with substrate and NAD(P)H has formed either
in a random or in an ordered sequential manner, the enzyme-bound flavin
is readily reduced by NAD(P)H within this complex. The reduced enzyme in complex with substrate and NAD(P)+ is kinetically
evident from a transient long wavelength absorbance characteristic of a
charge-transfer complex (21, 23). Release of NAD(P)+
leads to a decay of the charge-transfer complex and completes the
reductive half-reaction. The reduced enzyme-substrate complex subsequently reacts with oxygen in a second-order reaction yielding the
flavin C(4a)-hydroperoxide, often referred to as intermediate I (11,
24). The binding of the substrate is essential to stabilize this
oxygenated flavin species, which, in the absence of substrate, instantly decays to hydrogen peroxide and the oxidized enzyme. The
distal oxygen of the flavin C(4a)-hydroperoxide is assumed to attack
the substrate carbon ortho or para to the
existing hydroxyl group by an electrophilic mechanism. Concomitant with
substrate hydroxylation, the formation of the so-called intermediate II can be observed. This intermediate is seen only with
p-hydroxybenzoate hydroxylase (11, 13) and phenol
hydroxylase (18, 19, 25) in the presence of certain substrate analogs.
Several models for the structure of intermediate II have been
postulated (11, 26, 27), but all the evidence presently available
suggests that intermediate II is a complex between the flavin
C(4a)-hydroxide and the quinoid form of the aromatic product (19, 24).
The flavin C(4a)-hydroxide (intermediate III) is formed during the catalytic cycle after the oxygen transfer onto the substrate has occurred (11). Release of H2O from this species leads to
reoxidized enzyme thus completing the catalytic cycle.

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Scheme 2.
Reaction cycle of flavoprotein aromatic
hydroxylases. Where EFLoxS indicates
oxidized enzyme-substrate complex; EFlredS
indicates reduced enzyme-substrate complex; EFlHOOH-S,
flavin C(4a)-hydroperoxide enzyme-substrate complex (intermediate I);
EFlHOH-P* indicates flavin C(4a)-hydroxide
enzyme-hydroxycyclohexadienone product complex (intermediate II);
EFlHOH-P indicates flavin C(4a)-hydroxide enzyme-product
complex (intermediate III); S indicates substrate; P, product.
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Our studies were aimed at elucidating the catalytic mechanism of
2-hydroxybiphenyl 3-monooxygenase. To that end, we investigated the
influence of various enzyme ligands on individual steps of the
reductive and of the oxidative half-reaction. The kinetic properties of
2-hydroxybiphenyl 3-monooxygenase allowed for the first time a rapid
scan analysis of all reaction steps. In the oxidative half-reaction,
the flavin C(4a)-hydroperoxide and the C(4a)-hydroxyflavin were easily
detected at pH 7.5, the pH optimum of overall catalysis. However, no
formation of intermediate II was observed under any conditions.
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MATERIALS AND METHODS |
Chemicals--
Glucose oxidase and NADH were purchased from
Roche Molecular Biochemicals. Aromatic substrates for 2-hydroxybiphenyl
3-monooxygenase have been described elsewhere (2). All other compounds
were obtained from Aldrich.
Enzyme Purification--
2-Hydroxybiphenyl 3-monooxygenase was
purified from Escherichia coli JM101 harboring the
hbpA gene, which encodes 2-hydroxybiphenyl 3-monooxygenase
from P. azelaica HBP1, as reported earlier (2). The purified
enzyme was stored at a concentration of 23 mg ml
1 in 20 mM potassium phosphate buffer (pH 7.0) at
70 °C. Prior to use, an appropriate amount of enzyme was incubated with an FAD
solution (1 mM). Excess FAD was removed by means of size
exclusion chromatography on a Bio-Gel P-6DG column (Bio-Rad). The
enzyme concentration was determined spectrophotometrically on the basis of FAD content using a molar absorption coefficient of 9.7 mM-1 cm
1 at 452 nm (see
"Results").
Analytical Methods--
Dissociation constants of enzyme-ligand
complexes were determined fluorimetrically with an Aminco SPF-500C
spectrofluorimeter (Spectronic Instruments, Inc., Rochester, NY) or
spectrophotometrically with an Aminco DW-2000 spectrophotometer as
described elsewhere (28). 2-Hydroxybiphenyl 3-monooxygenase activity
was routinely assayed with an Hewlett-Packard HP8453 diode array
spectrophotometer (Hewlett-Packard, Palo Alto, CA) at 30 °C. The
assay mixture contained air-saturated 50 mM HEPES buffer
(pH 7.5), 0.1 mM 2-hydroxybiphenyl, and 0.15 mM
NADH. Buffers used for binding studies and kinetic experiments were 50 mM MES1 (pH
6.0-6.6), 50 mM HEPES (pH 7.0-8.0), and 50 mM
TAPS (pH 8.5-9.0).
Steady-state kinetics were performed in air-saturated 50 mM
HEPES buffer (pH 7.5), using a DW-2000 double beam spectrophotometer. The instrument was equipped with thermostated cell holders and interfaced to a minicomputer for data acquisition and data handling.
Stopped-flow Kinetics--
Stopped-flow kinetic traces were
recorded at 7 or 30 °C by means of a Hi-Tech SF-51 stopped-flow
apparatus (Hi-Tech Scientific, Salisbury, UK) with a dead time of 1.3 ms. Spectral scans were recorded with a Hi-Tech M300 monochromator
diode array detector (Hi-Tech Scientific, Salisbury, UK) that had a
dead time of 5.6 ms. A total number of 96 scans could be collected in
each single experiment with a minimum length of 0.96 s.
Deconvolution analysis of spectral data was done with the Specfit
Global Analysis program, version 2.10 (Spectrum Software Association,
Chapel Hill, NC). Concentration values in stopped-flow experiments
always refer to the final concentration obtained after mixing equal
volumes of enzyme and reagents.
The anaerobic reduction of protein-bound FAD was monitored at 450 nm
either in the absence or in the presence of saturating amounts of
substrate, effector, and varying concentrations of NADH. Experiments
were performed in 50 mM HEPES buffer (pH 7.5) containing 1 mM EDTA. Second-order rate constants and dissociation constants were determined by non-linear curve-fitting routines. The
kinetics of enzyme reduction were also measured at longer wavelengths
(>600 nm) in order to detect the formation of flavin charge-transfer
complexes (23, 29). To ensure anaerobic conditions, 10 mM
glucose and catalytic amounts of glucose oxidase were added to
argon-flushed buffer and enzyme solutions. Moreover, the reaction syringes were immersed in a thermostated water bath where nitrogen was
continuously bubbled to avoid contamination with oxygen through Teflon
valves and stoppers. In experiments with diode array detection, reduction of protein-bound flavin was monitored between 400 and 760 nm.
For investigations of the oxidative half-reaction, anaerobic enzyme
solutions were reduced by a small excess of sodium dithionite and mixed
with air-saturated buffer (11.76 mg of O2
liter
1 at 7 °C, corresponding to 0.37 mM
O2). Reoxidation of the flavin was measured by following
the increase in absorption at 450 nm. Alternatively, in the diode array
mode, reoxidation of protein-bound FAD was followed over the wavelength
range between 320 and 620 nm.
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RESULTS |
Molar Absorption Coefficient of 2-Hydroxybiphenyl
3-Monooxygenase--
Unfolding of 2-hydroxybiphenyl 3-monooxygenase by
SDS allowed the accurate determination of the molar absorption
coefficient of protein-bound FAD. Fig.
1A shows the absorption
spectrum of uncomplexed 2-hydroxybiphenyl 3-monooxygenase before and
after incubation for 10 min in the presence of 0.1% SDS. Spectrum 2 represents the absorbance of free FAD that was released upon unfolding of the protein. From the spectral data it is clear that the
enzyme-bound oxidized flavin absorbs to a small but significant extent
above 520 nm (spectrum 1). Although rather unusual among flavoenzymes, a similar long wavelength absorbance was observed for melilotate hydroxylase (30) and pentachlorophenol hydroxylase (31). From the
absorbance difference between free and protein-bound flavin (Fig.
1A), a value of 9.7 mM
1
cm
1 was estimated for the molar absorption coefficient
(
452) of 2-hydroxybiphenyl 3-monooxygenase at a pH of
7.5. This value is in the same range as that reported for 4 p-hydroxybenzoate hydroxylase (28, 32).

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Fig. 1.
Spectral properties of 2-hydroxybiphenyl
3-monooxygenase. The absorption spectra were recorded in 50 mM HEPES at a pH of 7.5. A, optical spectra of a
6 µM solution of free enzyme before (spectrum
1) and after incubation (10 min) with 0.1% SDS (spectrum
2). B, difference spectra of a 20 µM
solution of free enzyme as a reference and the same solution containing
2.5, 5.0, 9.8, 14.6, 19.2, 28.6, 37.7, 46.7, and 89.3 µM
2-hydroxybiphenyl. The inset shows a plot of the absorption
changes at 502 nm as a function of the concentration of
2-hydroxybiphenyl.
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Equilibrium Binding of Aromatic Ligands to 2-Hydroxybiphenyl
3-Monooxygenase--
Previous results from steady-state kinetics
revealed that 2-hydroxybiphenyl 3-monooxygenase has a rather low
Michaelis constant (Km) for 2-hydroxybiphenyl
(apparent Km = 2.8 µM), a fact which
indicates a high affinity toward the aromatic substrate (2). In the
present study, the interaction between the oxidized enzyme and aromatic
ligands was investigated by static titration experiments. Binding of
2-hydroxybiphenyl led to marked perturbations in the absorbance of
protein-bound FAD. The flavin atypical absorbance at wavelengths higher
than 520 nm (cf. Fig. 1A, spectrum 1) disappeared
upon binding of 2-hydroxybiphenyl. A possible explanation is that
binding of 2-hydroxybiphenyl disrupts a charge-transfer interaction
between the oxidized flavin and an active site residue. Fig.
1B shows the absorption difference spectra recorded upon
titration of 2-hydroxybiphenyl 3-monooxygenase with 2-hydroxybiphenyl.
From plotting the absorption changes at 502 nm as a function of
substrate concentration and assuming simple 1:1 binding
(inset of Fig. 1B), a dissociation constant for
the enzyme-substrate complex of about 10 µM was
estimated. As can be seen from Table I,
the dissociation constant of the enzyme-2-hydroxybiphenyl complex did
not strongly vary between pH 6 and pH 9.
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Table I
Dissociation constants of complexes between 2-hydroxybiphenyl
3-monooxygenase and aromatic ligands as determined by fluorimetric and
spectral perturbation titration experiments
The experiments were performed at 25 °C in 50 mM MES at
a pH of 6.0, 50 mM HEPES at a pH of 7.5, and 50 mM TAPS at a pH of 9.0.
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Qualitatively similar absorption difference spectra as shown in Fig.
1B were observed when the oxidized enzyme was titrated with
2-sec-butylphenol. From treating the data according to
simple 1:1 binding, a dissociation constant for the
enzyme-2-sec-butylphenol of about 21 µM was
estimated (Table I). Titration of 2-hydroxybiphenyl 3-monooxygenase
with 2,3-dihydroxybiphenyl led to somewhat different spectral
perturbations (not shown). Again, the long wavelength absorbance above
500 nm disappeared, but the increase in absorbance around 370 and 440 nm (cf. Fig. 1B) was far less intense than with
2-hydroxybiphenyl. Nevertheless, stoichiometric binding was observed,
yielding a dissociation constant for the enzyme-2,3-dihydroxybiphenyl complex of about 60 µM (Table I).
Upon binding of FAD to the apoprotein, the flavin fluorescence is
usually quenched. With 2-hydroxybiphenyl 3-monooxygenase, the relative
fluorescence quantum yield of protein-bound FAD was about 1% that of
free FAD. Since the flavin fluorescence emission at 535 nm of
2-hydroxybiphenyl 3-monooxygenase showed marked changes upon the
binding of aromatic ligands, this feature was used to determine
dissociation constants of the enzyme-ligand complexes. Binding of
2-hydroxybiphenyl to 2-hydroxybiphenyl 3-monooxygenase at pH 7.5 resulted in a 2-fold increase in the fluorescence of protein-bound FAD.
The binding data could be described by simple 1:1 binding. A
dissociation constant for the oxidized enzyme-2-hydroxybiphenyl complex
of about 6 µM was calculated from the data (Table I). This value is in agreement with the value of the dissociation constant
derived from absorption spectroscopy. Similar fluorescence titration
experiments revealed that 2-hydroxybiphenyl 3-monooxygenase tightly
interacts with the substrate analogs 2-sec-butylphenol and
2-propylphenol (Table I). However, a somewhat weaker binding, especially at a pH of 6.0, was observed for the non-substrate effector
2,3-dihydroxybiphenyl (Table I).
Steady-state Kinetics--
The specific activity of
2-hydroxybiphenyl 3-monooxygenase in 50 mM HEPES (pH 7.5)
at 30 °C was 5.8 ± 0.2 units mg
1. This value,
based on flavin content analysis and a subunit molecular mass of 63.8 kDa (10), is considerably higher than the value originally derived from
colorimetric protein determinations (2). The activation energy of the
overall catalytic reaction of 2-hydroxybiphenyl 3-monooxygenase was
determined using the standard assay procedure at pH 7.5. A plot of ln
k versus 1/T in the range 7-30 °C
yielded a straight line, from which an activation energy of 49.2 ± 0.3 kJ mol
1 was estimated (not shown). At 7 °C, an
apparent Vmax value of 1.3 ± 0.1 units
mg
1 and apparent Km values,
Km' NADH = 9.7 ± 1.8 µM and
Km' 2-hydroxybiphenyl = 1.9 ± 0.4 µM, were estimated. The
Vmax at 7 °C corresponds to a turnover rate,
kcat = 1.4 ± 0.1 s
1. It
should be noted here that this value for the turnover rate refers to
the enzyme monomer and not to the tetramer as was done in Ref. 2. No
effort was made to determine the Michaelis constant for oxygen at
7 °C. However, from earlier kinetic data (2) and the high solubility
of oxygen at low temperature, it is assumed that the estimated turnover
rate approaches maximal rate conditions.
Reduction of 2-Hydroxybiphenyl 3-Monooxygenase by NADH--
The mechanism of interaction between 2-hydroxybiphenyl
3-monooxygenase and NADH was studied at pH 7.5 (30 °C) by
stopped-flow absorption spectroscopy. Anaerobic reduction of
uncomplexed 2-hydroxybiphenyl 3-monooxygenase by NADH (monitored at 450 nm) was rather slow, taking seconds to complete (Fig.
2A). No transient absorbance changes above 500 nm, which would indicate the formation of flavin semiquinones or charge-transfer complexes, were observed. Reduction of
the free enzyme by NADH was clearly not a monophasic process. Fitting
the data to a two-exponential function showed that the reaction was
biphasic. The amplitudes of the two phases remained constant at a ratio
of 50:50 when the reaction was performed with NADH at concentrations
between 25 µM and 5 mM. A possible
explanation for the biphasic kinetics is the presence of two distinct
enzyme populations in the absence of substrate (15, 33). From treating the data according to such a model, a maximum first-order rate constant
at an infinite NADH concentration of 5.5 s
1 and a
dissociation constant, Kd NADH = 5.8 mM, were estimated for the fast process, whereas a maximum
rate constant at infinite NADH concentration of 1.8 s
1
and a dissociation constant, Kd NADH = 7.3 mM NADH, were calculated for the slow process
(inset Fig. 2A, Table
II). The values for the reduction rate of
the free enzyme are similar to those for the turnover rate of the NADH
oxidase activity of 2-hydroxybiphenyl 3-monooxygenase (2), which
confirms that flavin reduction is rate-limiting in this process.

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Fig. 2.
Anaerobic reduction of 2-hydroxybiphenyl
3-monooxygenase by NADH. The experiments were performed at
30 °C in the stopped-flow spectrophotometer. A,
absorbance decrease at 450 nm upon anaerobic reduction of a solution of
12.4 µM free enzyme by 2 mM NADH in 50 mM HEPES, 1 mM EDTA, at a pH of 7.5. The
inset shows a plot of the apparent reduction rates as a
function of the concentration of NADH, assuming two enzyme populations.
The data were obtained from separate reduction experiments at different
NADH concentrations. B, absorbance decrease at 450 nm
observed upon anaerobic reduction of a solution of 21 µM
enzyme in complex with 2-hydroxybiphenyl by 2 mM NADH. Both
syringes contained 0.2 mM 2-hydroxybiphenyl in 50 mM HEPES, 1 mM EDTA, at pH of 7.5. The
inset shows a plot of the apparent reduction rates of the
enzyme-substrate complex as a function of the concentration of NADH as
obtained by independent experiments.
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Table II
Kinetic parameters for the reductive half-reaction of 2-hydroxybiphenyl
3-monooxygenase
The anaerobic reduction experiments were performed at 30 °C in 50 mM HEPES at a pH of 7.5. For experimental details see Figs.
2 and 3. Kd NADH is the dissociation constant of
NADH from the free enzyme or enzyme-ligand complexes.
k2 (cf. Scheme 3) is the maximal
first-order rate constant for the reduction of the enzyme at an
infinite concentration of NADH.
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Reduction of Enzyme-Ligand Complexes by NADH--
The substrate
2-hydroxybiphenyl acts as an effector and strongly stimulates the
anaerobic reduction of 2-hydroxybiphenyl 3-monooxygenase by NADH. The
rate of enzyme reduction as determined from the decrease in absorbance
at 450 nm was dependent on the NADH concentration, the reaction being
monophasic at all NADH concentrations studied (Fig. 2B). The
maximum first-order rate constant at an infinite NADH concentration was
262 s
1, with a dissociation constant of NADH from the
enzyme-2-hydroxybiphenyl complex of 1.6 mM. This value of
the dissociation constant is lower than that estimated for the free
enzyme, which suggests that binding of NADH to the enzyme-substrate
complex is preferred.
2-sec-Butylphenol, another efficient substrate of
2-hydroxybiphenyl 3-monooxygenase (2), was also tested for its effector properties. Anaerobic reduction of the
enzyme-2-sec-butylphenol complex was significantly slower
than of the enzyme-2-hydroxybiphenyl complex and was not monophasic.
Similar to the free enzyme, biphasic reduction kinetics were observed.
The two amplitudes obtained by fitting the data to a two-exponential
function revealed an equal contribution of both processes which did not
vary with the concentration of NADH between 50 µM and 2 mM (data not shown). Assuming two enzyme populations, we
calculated a maximum reduction rate of 137 s
1 and a
dissociation constant, Kd NADH = 1.8 mM, for the fast process, and a maximum reduction rate of
36 s
1 and a dissociation constant, Kd
NADH = 3.6 mM, for the slow process (Table II). These
data show that 2-sec-butylphenol is a strong effector that
highly stimulates the reduction of protein-bound FAD.
Again, biphasic kinetics were observed
when the NADH-dependent anaerobic reduction of the
enzyme-2,3-dihydroxybiphenyl complex was monitored in the stopped-flow
apparatus. The extrapolated rate constants and the ratio of the
amplitudes for both processes were in the same range as observed for
the enzyme-2-sec-butylphenol complex. However, the estimated
dissociation constants of NADH were relatively high (Table II), which
suggests that the interaction between NADH and the enzyme-product
complex is rather weak.
Formation of Charge Transfer Intermediates--
To gain more
insight in the sequence of events during the reductive half-reaction of
2-hydroxybiphenyl 3-monooxygenase, we studied the reduction of the
enzyme-2-hydroxybiphenyl complex by NADH in further detail. Monitoring
the reduction reaction at wavelengths above 500 nm, we observed small
absorbance changes that are characteristic of the transient
stabilization of charge-transfer complexes between protein-bound flavin
and NAD(P)H (23). Fig. 3A
shows typical reaction traces recorded at 450, 550, and 700 nm. From
the rise and fall traces at 550 and 700 nm, it is evident that at least
one transient intermediate was formed. Based on the absorption
coefficient at 452 nm (
452) of 9.7 mM
1 cm1 for the oxidized enzyme,
an absorption coefficient of 1.1 mM
1
cm
1 for the intermediate was calculated from the maximal
absorbance at 700 nm. The rate constant for the formation of the charge
transfer intermediate corresponded perfectly to the observed flavin
reduction rate (k2' = 139.6 s
1) measured at 450 nm (Table
III). This finding corroborates that flavin reduction and charge transfer complex formation actually represent the same reaction step. The presumed reaction sequence for
the reductive half-reaction is shown in Scheme 3.
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SCHEME 3. Reductive half-reaction
for 2-hydroxybiphenyl-3-monooxygenase complexed with
2-hydroxybiphenyl.

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Fig. 3.
Time course of absorbance upon reduction of
the enzyme-substrate complex by NADH. The experiments were
performed at 7 °C in the stopped-flow spectrophotometer. Both
syringes contained 0.2 mM 2-hydroxybiphenyl in 50 mM HEPES, 1 mM EDTA, at pH of 7.5. A, anaerobic reduction of a solution of 21 µM
enzyme in complex with 2-hydroxybiphenyl by 2 mM NADH.
Typical reaction traces recorded at 550 and 700 nm are shown along with
the reaction trace for the same reaction at 450 nm. B,
spectra obtained from deconvolution of spectral changes observed upon
the anaerobic reduction of a solution of 8.7 µM enzyme in
complex with 2-hydroxybiphenyl by 2 mM NADH. Original
spectral scans (not shown) were recorded from 5.6 to 1910 ms with
intervals of 20 ms. Spectra A C are the spectra
of the oxidized enzyme, the intermediate, and of the reduced enzyme,
respectively. The data were fitted to a model with two consecutive
reactions (A B C). The
inset shows the simulated concentrations of the three
components during the anaerobic reduction by NADH.
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Table III
Kinetic evidence for the formation of a charge transfer complex during
anaerobic reduction of the enzyme-substrate complex of
2-hydroxybiphenyl 3-monooxygenase
The experiments were performed in 50 mM HEPES at a pH of
7.5. For experimental details see Fig. 3. Symbols: T,
temperature; , wavelength; k'2 and
k'3, apparent first-order rate constants for the
formation and the decay of the charge-transfer complex (cf.
Scheme 3).
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where EFloxS indicates oxidized
enzyme-substrate complex; EFloxS-NADH and
EFlredS-NAD+ indicate
charge transfer complexes; and EFlredS indicates
reduced enzyme-substrate complex.
Since the rate constant for the formation of the intermediate
(k2') was much faster than its decay
(k3'), we conclude that only
EFlredS-NAD+ (
700 = 1.1 mM
1 cm
1) contributes to the
absorbance of the charge transfer complex. Furthermore, these data
suggest that the release of NAD+ from the reduced
enzyme-substrate complex is the slowest step during the reductive
half-reaction (Table III).
At 7 °C, the reduction of the enzyme-2-hydroxybiphenyl complex by
NADH was approximately five times slower than at 30 °C. The rate
constants for the formation of the charge-transfer complex determined
at 550 and 700 nm agreed again well with the rate constant found for
the reduction of protein-bound FAD at 450 nm
(k2', Table III). Interestingly,
the decay of the charge-transfer complex at 7 °C was approximately
30 times slower than at 30 °C (k3',
Table III). Therefore, we performed stopped-flow experiments with diode
array detection at 7 °C. This allowed direct monitoring of the
spectrum of the charge-transfer complex. Fig. 3B shows the
resolved spectra of oxidized flavin, reduced flavin, and the transient
intermediate. These spectra were obtained by deconvolution analysis of
the original spectral data. The inset of Fig. 3B
shows the simulated concentrations of the three spectral species during the reaction. The rate constant for the irreversible transition from
the oxidized flavin to the charge transfer intermediate
(k2 in Scheme 3) was similar to that calculated
from single wavelength scans at 550 and 700 nm (Table III). Moreover,
the calculated decay rate (k3 in Scheme 3) of
1.0 s
1 was in good agreement with the rate constants
determined from single scan data. The transient formation of a
charge-transfer complex was also observed during reduction of the
enzyme-2-sec-butylphenol complex and the
enzyme-2,3-dihydroxybiphenyl complex. For all these enzyme-ligand
complexes, the rate of NAD+ dissociation was the slowest
step in the reductive half-reaction (results not shown).
Reduction of the Enzyme-Ligand Complexes in the Presence of
NAD+--
To get a deeper insight into the nature of the
biphasic behavior observed upon mixing free enzyme or several
enzyme-ligand complexes with NADH, we studied the anaerobic reduction
in the presence of excess NAD+. If the biphasic kinetics
were the result of two enzyme conformations at equilibrium each having
different reduction kinetics, preincubation of the enzyme with
NAD+ would eliminate one of the two phases simply by
alteration of the equilibrium (33). However, oxidized 2-hydroxybiphenyl
3-monooxygenase preincubated with 5 mM NAD+
retained the typical biphasic reduction kinetics, both at 7 and 30 °C (Table IV). Since the presence
of an excess of NAD+ reduced the apparent reduction rates
only slightly and did not hinder the reduction reaction per
se, the binding of NAD+ to the oxidized
2-hydroxybiphenyl 3-monooxygenase was considered to be rather weak.
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Table IV
Effect of NAD+ on the anaerobic reduction of the free enzyme
and the enzyme-product complex by NADH
In separate experiments, the free enzyme and the enzyme-product complex
(approximately 20 µM) were anaerobically mixed with 2 mM NADH in 50 mM HEPES at a pH of 7.5. The
reduction was followed at 450 nm in the stopped-flow spectrophotometer.
Analogous experiments were performed with 5 mM NAD+
present in both syringes. Symbols: k'2, apparent
first-order rate constants for the formation of the charge-transfer
complex (cf. Scheme 3). Two or three first-order rate
constants are shown in cases where multiphasic reaction kinetics were
observed (see text for explanations).
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In another series of experiments we investigated the influence of
excess NAD+ on the reduction of the enzyme-product complex
by NADH at 7 °C. First of all, the reduction of the
enzyme-2,3-dihydroxybiphenyl complex was followed in the absence of
NAD+. The transient formation of a charge-transfer complex
can easily be seen from Fig.
4A. A completely different
picture was obtained when the same reaction was analyzed in the
presence of 5 mM NAD+ (Fig. 4B). The
reaction trace recorded at 700 nm reflects the formation of a stable
charge-transfer complex. The fact that this complex did not decay when
NAD+ was present in excess was taken as a proof that the
observed intermediate was in fact similar to the
EFlredS-NAD+ species shown in
Scheme 3. Fitting of the data to a two-exponential function revealed
that the reaction traces recorded at 700 nm were biphasic, the reaction
rates (k2') being 4.6 s
1
for the faster rate and 0.7 s
1 for the slower rate. In
contrast, the reaction traces recorded at 450 nm were best fit to
a model based on a three-exponential function that suggests that more than two first-order reactions simultaneously contributed to the process (Table IV).

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Fig. 4.
Effect of NAD+ on the anaerobic
reduction of the enzyme-product complex by NADH. The experiments
were performed at 7 °C in the stopped-flow spectrophotometer. Both
syringes contained 0.5 mM 2,3-dihydroxybiphenyl in 50 mM HEPES, 1 mM EDTA (pH 7.5). Reaction traces
recorded at 450 nm are shown along with the reaction trace for the same
reaction at 700 nm. A, anaerobic reduction of a solution of
14.3 µM enzyme complexed with 2,3-dihydroxybiphenyl by 2 mM NADH. B, anaerobic reduction of a solution of
19.4 µM enzyme in complex with 2,3-dihydroxybiphenyl by 2 mM NADH in the presence of 5 mM
NAD+.
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Diode array detection was used to study the anaerobic reduction of free
enzyme, the enzyme-substrate complex, and the enzyme-product complex in
the presence of excess NAD+ at 7 °C in more detail. As
expected, no intermediate formation occurred during reduction of the
free enzyme. For the reduction of the enzyme-substrate complex, the
rate constants for the formation and the decay of the charge-transfer
complex were 19 s
1 (k2')
and 0.009 s
1 (k3'),
respectively. For comparison, the corresponding rate constants for the
enzyme-product complex determined from deconvolution of spectral data
were 2.5 s
1 (k2') and
0.007 s
1 (k3'),
respectively. Considering the fact that the rate constant obtained from
the diode array experiment with the enzyme-product complex describes
the entire reduction reaction as a monophasic process, the value
of 2.5 s
1 for k2' is in
rather good agreement with the single wavelength data that described
the process by terphasic reaction kinetics (Table IV).
Oxidation of Reduced 2-Hydroxybiphenyl 3-Monooxygenase--
Upon
mixing of the reduced enzyme with air-saturated buffer, the flavin
absorbance changed from the reduced spectrum to the oxidized spectrum
in a fast biphasic reaction. Interestingly, at 30 and at 7 °C
different kinetics were observed at different wavelengths (Fig.
5A). The highest rate for the
increase of the initial absorbance was observed at 390 nm, which
suggests that a spectral species with absorption characteristics around
390 nm was formed during the oxidation of the enzyme. However, no evidence for the stabilization of an intermediate was obtained when the
reaction was analyzed with diode array detection (Fig. 5B).
Moreover, it was impossible to generate the fully reduced spectrum of
the flavin due to the dead time of the instrument (6 ms). From these
results it is concluded that formation and decay of the putative flavin
C(4a)-hydroperoxide were too fast to be detected.

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Fig. 5.
Reaction of reduced 2-hydroxybiphenyl
3-monooxygenase with oxygen. A solution of 16.9 µM
free reduced enzyme was rapidly mixed with 0.18 mM oxygen
in 50 mM HEPES at a pH of pH 7.5. The reaction was followed
at 7 °C by means of the stopped-flow spectrophotometer in the single
wavelength or diode array mode. A, single wavelength
reaction traces monitored between 390 and 480 nm as indicated.
B, original spectral scans are shown from 5.6 to 965.6 ms
with intervals of 10 ms.
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Oxidation of the Reduced Enzyme-Substrate Complex--
Next,
reduced enzyme-substrate complex was mixed with air-saturated buffer in
the stopped-flow spectrophotometer at 7 °C. As can be seen from Fig.
6, most traces recorded at different wavelengths showed shapes that are indicative for the transient formation of at least one intermediate. Similar experiments performed with diode array detection were aimed at verifying putative
flavin-oxygen adducts (Fig.
7A). Deconvolution analysis of
spectral data on the basis of a three-step consecutive reaction
sequence revealed the presence of two spectral intermediates (Fig.
7B). By comparing the spectra of 2-hydroxybiphenyl
3-monooxygenase with the spectra of known oxygenated flavin
intermediates (for instance those of p-hydroxybenzoate
hydroxylase (13) and phenol hydroxylase (19)), the two intermediates
observed during the oxidation of the enzyme-substrate complex of
2-hydroxybiphenyl 3-monooxygenase were assigned to the flavin
C(4a)-hydroperoxide (intermediate I) and the flavin C(4a)-hydroxide
(intermediate III), respectively. Therefore, the sequential formation
of the two intermediates is consistent with the Scheme 4 as
follows.
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SCHEME 4. Oxidative
half-reaction for 2-hydroxybiphenyl-3-monooxygenase complexed with
2-hydroxy- biphenyl.

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Fig. 6.
Reaction of the reduced enzyme-substrate
complex with oxygen. The experiments were performed at 7 °C in
the stopped-flow spectrophotometer. A solution of 22.8 µM
reduced enzyme in complex with 2-hydroxybiphenyl was reacted with 0.18 mM oxygen at 7 °C. Both syringes contained 0.2 mM 2-hydroxybiphenyl in 50 mM HEPES at a pH of
7.5. Single wavelength reaction traces recorded between 350 and 500 nm
are shown.
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Fig. 7.
Spectral changes observed during the reaction
of the enzyme-substrate complex with oxygen. A, a
solution of 16.7 µM reduced enzyme in complex with
2-hydroxybiphenyl was reacted with 0.18 mM oxygen at
7 °C. Both syringes contained 0.2 mM 2-hydroxybiphenyl
in 50 mM HEPES at a pH of 7.5. Original spectral scans are
shown from 5.6 to 2405.6 ms with intervals of 25 ms. B,
spectra obtained after deconvolution of the original spectral scans.
Spectra A D are the spectra of the reduced enzyme-substrate
complex, the first intermediate, the second intermediate, and of the
oxidized enzyme- substrate complex, respectively. The data were fitted to a model
with three consecutive reactions (A B C D). The inset shows a simulation
of the concentrations as a function of time of the four components
during the oxidation of reduced enzyme. C, the effect of the
oxygen concentration on the rate constant for the formation of the
first spectral intermediate was followed by diode array detection at
7 °C. A solution of 18.9 µM reduced enzyme in complex
with 0.2 mM 2-hydroxybiphenyl was reacted with 50 mM HEPES at a pH of 7.5 containing different concentrations
of oxygen. Solutions containing 10, 20, and 30% oxygen were produced
by mixing appropriate volumes of 100% oxygen-saturated buffer and
anoxic buffer, respectively. All buffer mixtures contained 0.2 mM 2-hydroxybiphenyl. The apparent first-order rate
constants were plotted against the oxygen concentration. From the slope
a second-order rate constant of 7.1 × 105
M 1 s 1 was calculated for the
oxidation of the reduced enzyme-substrate complex.
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The first phase of the reaction, which was identified by
deconvolution analysis of the spectral data, was very short (completed within 30 ms) and linearly dependent on the concentration of oxygen. The reaction occurred at a second-order rate constant of 7.1 × 105 M
1 s
1 (Fig.
7C, Table V). Therefore, this
step represented the reaction of reduced flavin with oxygen yielding
the flavin C(4a)-hydroperoxide (
max = 391 nm,
= 7.2 mM
1 cm
1). The next phase,
which was completed after 200 ms, displayed a first-order rate of 10.3 s
1 and was represented by the formation of the flavin
C(4a)-hydroxide (
max = 380 nm,
= 7.8 mM
1 cm
1). The final phase,
which took about 2.5 s to complete, showed a first-order rate of
2.7 s
1 and was attributed to the decay of the flavin
C(4a)-hydroxide intermediate. In accordance with the consecutive model
depicted in Scheme 4, the latter two steps in the oxidative
half-reaction were independent of the oxygen concentration.
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Table V
Kinetic parameters for the oxidative half-reaction of 2-hydroxybiphenyl
3-monooxygenase
The reactions of reduced enzyme with oxygen were performed in 50 mM HEPES at different pH. Each effector was present in
sufficient concentrations to saturate the enzyme. For experimental
details see Figs. 5-7 and Scheme 3. The rate constants
k'4, k'5, and
k'6 were obtained by deconvolution of spectral data
according to a model with three consecutive reactions.
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Lowering the pH of the reaction to a value of 6.6 neither influenced
the rate constants significantly nor improved the resolution of the
processes involved in the oxidative half-reaction (Table V). Moreover,
the spectra of the flavin-oxygen intermediates were qualitatively the
same as at a pH of 7.5.
With 2-sec-butylphenol as the ligand, similar spectra were
recorded as with 2-hydroxybiphenyl, and the rate constants of the individual reaction steps were of the same magnitude. Hence, the existence of two intermediates during the oxidation of reduced 2-hydroxybiphenyl 3-monooxygenase was confirmed. From the kinetic data
listed in Table V, it is evident that the decay of the flavin C(4a)-hydroxide was the slowest step in the oxidative
half-reaction.
Oxidation of the Reduced Enzyme-Product Complex--
No spectral
intermediates were observed during the oxidation of the reduced
enzyme-product complex. The absorbance change from the reduced to the
oxidized flavin followed biphasic kinetics, and reoxidation was even
faster than measured with the free enzyme (Table V). In the single
wavelength mode the highest rate for initial absorbance increase was
observed at 390 nm, which points to the transient formation of the
flavin C(4a)-hydroperoxide. In the presence of 2,3-dihydroxybiphenyl
this intermediate, which is necessarily formed upon reaction of reduced
flavin with oxygen (11), decayed faster than in the free enzyme.
Moreover, in the presence of 2,3-dihydroxybiphenyl no indication
for the formation of the flavin C(4a)-hydroxide was found, which is
consistent with the fact that 2,3-dihydroxybiphenyl is not further
hydroxylated by 2-hydroxybiphenyl 3-monooxygenase (2). Although
2,3-dihydroxybiphenyl stimulates flavin reduction (cf. Table
II), its binding to the reduced enzyme obviously hampers the
stabilization of the flavin C(4a)-hydroperoxide.
Oxidation of the Reduced Enzyme-Substrate Complex in the Presence
of Monovalent Anions--
Because monovalent anions are known to
affect the kinetics of flavoprotein monooxygenases (7), in particular
of phenol hydroxylase (8, 19), it was of interest to study the
oxidative half-reaction of 2-hydroxybiphenyl 3-monooxygenase in the
presence of azide and chloride anions. Sodium azide did not change the optical flavin spectrum of the oxidized enzyme-substrate complex. When
dithionite-reduced 2-hydroxybiphenyl 3-monooxygenase (21.8 µM) in complex with 0.2 mM 2-hydroxybiphenyl
was reacted with air-saturated buffer in the presence of 0.2 M sodium azide at 7 °C, pH 7.5, the formation of the
flavin C(4a)-hydroperoxide was enhanced. This is concluded from the
fact that in diode array detection, the spectrum of the reduced
enzyme-substrate complex was absent from the recordings even when the
reaction was followed at a time scale of 0.96 s. The first
spectrum taken at 5.6 ms after mixing resembled a composite of two
flavin intermediates that were also observed in analogous experiments
with the enzyme-substrate in the absence of azide (Fig.
8; cf. Fig. 7A).
According to the reaction in Scheme 4, we calculated a series of
composite spectra on the basis of the intermediate spectra shown in
Fig. 7B to elucidate the composition of the spectra observed
in the presence of azide (inset of Fig. 8). The first
spectrum taken at 5.6 ms could be perfectly described as a composite of
the spectrum of the flavin C(4a)-hydroperoxide, the spectrum of the
flavin C(4a)-hydroxide, and the spectrum of the oxidized flavin. This
suggests that, in the presence of azide, the reaction of the reduced
enzyme-substrate complex with oxygen bifurcated to directly form
oxidized enzyme from the flavin C(4a)-hydroperoxide, as well as the two
flavin oxygen adducts. Due to the stabilization of the flavin
C(4a)-hydroxide, the formation of the oxidized enzyme appeared to be a
rather slow process (0.07 s
1), taking about 1 min to
complete. Despite this stabilization, there was no indication for the
formation of the so-called intermediate II, which is characterized by a
high extinction coefficient at 385 nm (34).

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Fig. 8.
Effect of sodium azide on the reaction of the
reduced enzyme-substrate complex with oxygen. A solution of 21.8 µM reduced enzyme in complex with 0.2 mM
2-hydroxybiphenyl was reacted with 0.18 mM oxygen at
7 °C in 50 mM HEPES at a pH of 7.5. Both syringes
contained 0.2 mM 2-hydroxybiphenyl and 0.2 M
sodium azide. Original spectral scans are shown from 0.0056 to 47.5 s
with intervals of 1 s except for the first four spectra that were
shown with intervals of 0.5 s. The spectrum recorded at 47.5 s does not represent the fully oxidized enzyme form. The
inset shows simulated composite spectra on the basis of
calculated intermediate spectra obtained from reoxidation experiments
in the absence of sodium azide (cf. Fig. 7B).
Spectrum 1, 50:50 composite of the spectra of the first and
the second intermediate in Fig. 7B (spectrum B
and spectrum C) assuming 20% contribution of the spectrum
of oxidized enzyme; spectrum 2, 20:80 composite
of the spectra of the first and the second intermediate with 35%
contribution of the spectrum of oxidized enzyme; spectrum
3, 45:55 composite of the spectra of the second intermediate
and oxidized enzyme; spectrum 4, 25:75 composite
of the spectra of the second intermediate and oxidized enzyme;
spectrum 5, spectrum of oxidized enzyme.
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In the presence of 0.1 M sodium chloride, the formation of
two distinct flavin intermediates was determined by deconvolution analysis of spectral data. The flavin C(4a)-hydroperoxide was formed
with an apparent second order rate of 5.3 × 105
M
1 s
1 and decayed with a rate
of 7.4 s
1 to form the flavin C(4a)-hydroxide. The latter
slowly decayed to oxidized enzyme with a rate of 0.34 s
1.
The intermediate spectra were qualitatively similar to those observed
in the absence of monovalent anions. Moreover, in contrast to
p-hydroxybenzoate hydroxylase (7) and phenol hydroxylase (8), the absorption spectrum of the oxidized enzyme-substrate complex
of 2-hydroxybiphenyl 3-monooxygenase was not changed in the presence of
0.1 M sodium chloride.
 |
DISCUSSION |
Monooxygenases acting on phenolic compounds constitute a prominent
subgroup of the family of flavoprotein aromatic hydroxylases (10).
Mechanistic studies on these environmentally important enzymes thus far
were restricted to phenol hydroxylase from the basidiomycetous yeast
Trichosporon cutaneum (8, 19). 2-Hydroxybiphenyl 3-monooxygenase from the soil bacterium P. azelaica HBP1 is
the only flavoprotein aromatic hydroxylase described to date that acts
on a bicyclic compound as the natural substrate (2). This and the
efficient expression of the hbpA gene in E. coli
prompted us to study the catalytic mechanism of this enzyme by rapid
reaction techniques. The results from studies on the reductive and
oxidative half-reactions of 2-hydroxybiphenyl 3-monooxygenase with
different aromatic substrates and non-substrate effectors clearly
established that the enzyme shares many mechanistic features with other
flavoprotein aromatic hydroxylases. However, several unique kinetic
properties were uncovered, which will be discussed in more detail below.
Anaerobic reduction of uncomplexed 2-hydroxybiphenyl 3-monooxygenase by
NADH was a relatively slow process. However, the
NADH-dependent reduction of the substrate-free enzyme
occurred at a significant rate, in agreement with the NADH-oxidase
activity previously observed from steady-state experiments (2).
Anaerobic reduction of 2-hydroxybiphenyl 3-monooxygenase by NADH was
strongly stimulated in the presence of aromatic ligands, acting as
effectors. The rate of flavin reduction in the presence of the
physiological substrate 2-hydroxybiphenyl was more than 1 order of
magnitude higher than the overall turnover rate of the enzyme (2),
which revealed that reduction of the enzyme-substrate complex by NADH
is not limiting the rate of overall catalysis. Similar results
including a significant NAD(P)H oxidase activity were reported for
4-hydroxyphenylacetate 3-hydroxylase (15) and phenol hydroxylase (8,
18). In contrast, free p-hydroxybenzoate hydroxylase shows
hardly any NADPH oxidase activity, and binding of the aromatic
substrate to this enzyme results in a rate enhancement of flavin
reduction of more than 4 orders of magnitude (12, 23).
Anaerobic reduction of substrate-free 2-hydroxybiphenyl
3-monooxygenase, the enzyme-2-sec-butylphenol complex, and
the enzyme-2,3-dihydroxybiphenyl complex by NADH showed biphasic
kinetics. Based on the equal contribution of the enzyme population to
both phases, we have interpreted the biphasic kinetics as the existence
of distinct enzyme forms. Moreover, as no indications were obtained for
subunit dissociation (2), the biphasic kinetics most probably reflect
different conformers of the tetrameric oxidized enzyme. If this
interpretation is correct, the monophasic kinetics observed in the
presence of 2-hydroxybiphenyl might indicate that the
conformational state of the enzyme is dependent on the type of
substrate bound and that binding of the physiological substrate induces
the conformation which promotes efficient reduction. In this respect it
is interesting to note that different FAD conformations have been
detected in p-hydroxybenzoate hydroxylase (35-37) and that
the mobility of the isoalloxazine ring of the flavin in this enzyme is
presumed to play a crucial role in coenzyme recognition (9, 37-39).
Moreover, recent studies from x-ray crystallography have pointed to the
existence of open and closed forms of phenol hydroxylase (40). From
this it was suggested that NADPH binding requires the open conformation
with the FAD moved out of the hydroxylation site (40).
As suggested by one of the referees, kinetic experiments on the binding
of substrates to the oxidized enzyme might give more insight in the
possibility that 2-hydroxybiphenyl 3-monooxygenase exists in two
conformational states that appear to be interconvertible. Preliminary
results indeed indicate that at 30 °C, only part of the enzyme
molecules rapidly interact with 2-hydroxybiphenyl and 2-sec-butylphenol. Moreover, the apparent rate constants for
the formation of the enzyme-substrate complexes approach a limiting value (kobs
100 s
1) at high
substrate concentrations, indicative of a mechanism involving a
two-step equilibrium process (41). Certainly, further work on the
structural and biological basis of this phenomena should be undertaken.
Anaerobic reduction of 2-hydroxybiphenyl 3-monooxygenase enzyme-ligand
complexes by NADH involved the stabilization of a transient flavin
charge-transfer species. In the presence of excess NAD+,
the charge transfer absorption persisted for minutes, providing evidence that this long wavelength absorption reflects the ternary complex between reduced enzyme, substrate (or product), and
NAD+. To our best knowledge, this high degree of
stabilization is exceptional among flavoprotein aromatic hydroxylases.
During the reaction of the substrate-free reduced enzyme with oxygen,
no stabilization of the putative flavin C(4a)-hydroperoxide was
observed. With the notable exception of 4-hydroxyphenylacetate 3-hydroxylase (15), this is a common feature of flavoprotein aromatic hydroxylases. From the properties of
4a-hydroperoxy-5-alkyl-3-methyllumiflavins (42) and studies on
apoflavoproteins reconstituted with artificial (43, 44) or isotopically
enriched FAD (45), it has been inferred that the lability of the
flavin-C(4a)-hydroperoxide is related to the solvent accessibility of
the active site. Oxygenated flavin intermediates were also not observed
when reduced 2-hydroxybiphenyl 3-monooxygenase was rapidly mixed with
oxygen in the presence of its physiological product
2,3-dihydroxybiphenyl. The second-order rate constant for this reaction
was significantly higher than with the free enzyme, indicating that the
lack of stabilization of the flavin C(4a)-hydroperoxide is not due to
impaired binding of the aromatic product. A possible explanation is
that binding of 2,3-dihydroxybiphenyl introduces steric constraints
near the C(4a) atom of the isoalloxazine ring of the FAD, thereby
promoting the rapid decomposition of the flavin C(4a)-hydroperoxide. A
similar conclusion was drawn for the oxygen reaction of the reduced
enzyme-product complex of p-hydroxybenzoate hydroxylase
(32). Two consecutive spectral intermediates were observed when the
oxidative half-reaction of 2-hydroxybiphenyl 3-monooxygenase was
studied in the presence of 2-hydroxybiphenyl or the substrate analog
2-sec-butylphenol. Based on the studies of Massey and
colleagues (11-15, 17-21, 46) with several other flavoprotein
monooxygenases, these spectral intermediates were assigned to the
flavin C(4a)-hydroperoxide (intermediate I) and flavin C(4a)-hydroxide
(intermediate III), respectively. The conversion of intermediate I to
intermediate III reflects the transfer of the terminal oxygen atom of
the flavin C(4a)-hydroperoxide to the aromatic substrate with
concomitant product formation (24).
With 2-hydroxybiphenyl 3-monooxygenase (at 7 °C), substrate
hydroxylation was far more rapid than the decomposition of the flavin
C(4a)-hydroxide and clearly not limiting the turnover rate. The
absorption spectrum of intermediate III as obtained from the deconvolution analysis showed a shoulder near 480 nm (Fig.
7A), indicative for the presence of oxidized flavin (11,
17). As no such shoulder was found in the calculated spectrum of
intermediate I (Fig. 7A), the most obvious interpretation is
that in the presence of 2-hydroxybiphenyl (or
2-sec-butylphenol) part of the flavin C(4a)-hydroperoxide
(about 20%) bifurcates to oxidized enzyme and hydrogen peroxide
(Scheme 4). This unproductive competing side reaction is in good
agreement with results from steady-state oxygen uptake experiments,
which showed that all 2-hydroxybiphenyl 3-monooxygenase substrates
partially uncouple oxygen activation from substrate hydroxylation
(2).
Under the conditions studied, the presence of monovalent anions did not
improve the kinetic resolution of reaction intermediates. However, in
analogy with p-hydroxybenzoate hydroxylase (11, 13, 27) and
phenol hydroxylase (19, 34), the decay of the C(4a)-hydroxyflavin to
oxidized enzyme was considerably retarded. The decay of intermediate
III was not affected by binding of excess substrate as it was observed
for phenol hydroxylase (34). A likely explanation is that elimination
of H2O from the flavin C(4a)-hydroxide is preceded by
product release. From studies on p-hydroxybenzoate
hydroxylase and phenol hydroxylase with certain substrates, it has been
proposed that the formation of the non-aromatic hydroxycyclohexadienone
product and the flavin C(4a)-hydroxide (intermediate II) actually
represents the hydroxylation step (24). In the present work, no
indication was obtained for the formation of intermediate II in the
catalytic mechanism of 2-hydroxybiphenyl 3-monooxygenase. It cannot be
excluded that this is simply due to the instability of the bicyclic
hydroxycyclohexadienone products, which would result in rapid
rearomatization. Our studies do also not allow us to make a statement
about the protonation state of the flavin C(4a)-hydroperoxide and
reduced enzyme-bound substrate (47). However, all the evidence
presently available suggests that 2-hydroxybiphenyl 3-monooxygenase is
a typical flavoprotein aromatic hydroxylase and that hydroxylation of
the bicyclic substrate involves the electrophilic attack of the distal
oxygen of the flavin C(4a)-hydroperoxide onto the
electrons of the
activated aromatic ring.
In conclusion, this study has clearly demonstrated that the aromatic
substrate in 2-hydroxybiphenyl 3-monooxygenase has strict control
acting as an effector in both the reductive and oxidative half-reaction. The work described here provides a sound basis for
future studies aimed at a better understanding of the molecular principles of this control.
 |
ACKNOWLEDGEMENTS |
We thank Marco Fraaije and Michel Eppink for
the help with some stopped-flow experiments. We are indebted to
Andreas Schmid for cultivating and harvesting the cells.
 |
FOOTNOTES |
*
This study was supported by Swiss National Sciences
Foundation Grant 5002-037940/1.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
¶
To whom correspondence should be addressed: Wageningen
University Research Centre, Dept. of Biomolecular Sciences, Laboratory of Biochemistry, Dreijenlaan 3, NL-6703 HA Wageningen, The Netherlands. Tel.: 31-317-482861; Fax: 31-317-484801; E-mail: willem.
vanberkel@fad.bc.wau.nl.
 |
ABBREVIATIONS |
The abbreviations used are:
MES, 4-morpholineethanesulfonic acid;
TAPS, 3-{[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]amino}-1-propanesulfonic
acid.
 |
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Schmid, A.
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