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J Biol Chem, Vol. 274, Issue 48, 34072-34082, November 26, 1999
§¶,
,
,
, and
From the Departments of
Ophthalmology,
§ Biochemistry, and
Chemistry, Case Western Reserve
University, Cleveland, Ohio 44106
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ABSTRACT |
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The assembly of the core oligosaccharide region
of asparagine-linked glycoproteins proceeds by means of the dolichol
pathway. The first step of this pathway, the reaction of dolichol
phosphate with UDP-GlcNAc to form
N-acetylglucosaminylpyrophosphoryldolichol (GlcNAc-P-P-dolichol), is under investigation as a possible site of
metabolic regulation. This report describes feedback inhibition of this
reaction by the second intermediate of the pathway,
N-acetylglucosaminyl-N-acetylglucosaminylpyrophosphoryldolichol (GlcNAc-GlcNAc-P-P-dolichol), and product inhibition by
GlcNAc-P-P-dolichol itself. These influences were revealed when the
reactions were carried out in the presence of showdomycin, a nucleoside
antibiotic, present at concentrations that block the de
novo formation of GlcNAc-GlcNAc-P-P-dolichol but not that of
GlcNAc-P-P-dolichol. The apparent Ki values for
GlcNAc-P-P-dolichol and GlcNAc-GlcNAc-P-P-dolichol under basal
conditions were 4.4 and 2.8 µM, respectively. Inhibition was also observed under conditions where mannosyl-P-dolichol
(Man-P-dol) stimulated the biosynthesis of GlcNAc-P-P-dolichol; the
apparent Ki values for GlcNAc-P-P-dolichol and
GlcNAc-GlcNAc-P-P-dolichol were 2.2 and 11 µM,
respectively. Kinetic analysis of the types of inhibition indicated
competitive inhibition by GlcNAc-P-P-dolichol toward the substrate
UDP-GlcNAc and non-competitive inhibition toward dolichol phosphate.
Inhibition by GlcNAc-GlcNAc-P-P-dolichol was uncompetitive toward
UDP-GlcNAc and competitive toward dolichol phosphate. A model is
presented for the kinetic mechanism of the synthesis of
GlcNAc-P-P-dolichol. GlcNAc-P-P-dolichol also exerts a stimulatory
effect on the biosynthesis of Man-P-dol, i.e. a reciprocal
relationship to that previously observed between these two
intermediates of the dolichol pathway. This network of inhibitory and
stimulatory influences may be aspects of metabolic control of the
pathway and thus of glycoprotein biosynthesis in general.
It has been well established that the dolichol pathway is the
means whereby the core region of asparagine-linked glycoproteins is
assembled (see review, Ref. 1). Our understanding of the mechanisms
that regulate this complex series of reactions, however, is still
limited. To this end we have directed our attention to the initial
reaction of the pathway, the reaction between dolichol phosphate and
UDP-GlcNAc producing
GlcNAc-P-P-dolichol,1
catalyzed by the enzyme, UDP-GlcNAc:dolichyl-phosphate
N-acetylglucosamine 1-phosphate transferase (GPT-1). Factors
that modulate the formation of GlcNAc-P-P-dolichol could have an effect
on the rate of synthesis of the other intermediates of the dolichol
pathway and thus influence nascent glycoprotein biosynthesis in
general. Several factors have previously been described that could have
a regulatory influence on this reaction as follows: hormonal effects
(2), genetic factors (3), and topography of enzymes and substrates
(4-6). Previous studies from this laboratory and others (7-15) have
also revealed that another intermediate of the pathway,
mannosyl-P-dolichol (Man-P-dol), acts as an allosteric activator of
GPT-1, resulting in the stimulation of GlcNAc-P-P-Dol synthesis. A
reciprocal relationship has now been revealed whereby Man-P-Dol
formation is stimulated by GlcNAc-P-P-dolichol. The present study has
revealed other potential aspects of regulation of the initial reaction
of the dolichol pathway. Feedback inhibition of the biosynthesis of
GlcNAc-P-P-dolichol was demonstrated by the second intermediate of the
pathway, GlcNAc-GlcNAc-P-P-dolichol. The formation of the latter
compound is catalyzed by a separate GlcNAc-transferase,
UDP-GlcNAc:GlcNAc-P-P-dolichol, N-acetylglucosamine transferase (GT-2), the kinetics of which have recently been described (16). Although the reversibility of GPT-1 has previously been demonstrated (17, 18), the present report also described the kinetics
of inhibition by GlcNAc-P-P-dolichol of its own
synthesis.2 We have examined
the effect of these inhibitory influences on the biosynthesis of
GlcNAc-P-P-dolichol at the basal level and under stimulatory conditions
in the presence of Man-P-dol. On the basis of these relationships a
model is suggested as a mechanism of action of UDP-GlcNAc:dolichol
phosphate, GlcNAc-1-phosphate transferase.
Enzyme Preparation, Chemicals
Microsomes were prepared from the retinas of 15-16-day-old
embryonic chicks as described previously (10). Purified, recombinant yeast mannosyl-P-dolichol synthase was obtained from Dr. John Schutzbach. Dolichol phosphate was purchased from Sigma.
UDP-[3H]GlcNAc and GDP-[14C]mannose were
purchased from NEN Life Science Products. UDP-[3H]GlcNAc,
UDP-[14C]GlcNAc, and GDP[3H]mannose were
purchased from American Radioactive Chemicals, Inc.
D-(+)-Showdomycin was obtained from Dr. Sung Ho Kang,
Department of Chemistry, Korea Advanced Institute of Science and
Technology, Taejon, Korea. N-Benzyl-2'-deoxyshowdomycin was
obtained from Dr. R. S. Hosmane, Department of Chemistry and
Biochemistry, University of Maryland Baltimore County, Baltimore.
Preparation of GlcNAc-P-P-dolichol
Enzymatic Synthesis--
Large scale preparations were performed
by incubating microsomes from the retina of the embryonic chick with
UDP-[14C]GlcNAc and dolichol phosphate, as described
previously (10). The incubations were performed in the presence also of
Man-P-Dol and the antibiotic, showdomycin. As described previously, the former stimulates the production of GlcNAc-P-P-dolichol (7-12), and
the latter both inhibits the formation of GlcNAc-GlcNAc-P-P-dolichol and also brings about an increase in the production of the mono-GlcNAc derivative (19). The product was isolated by solvent partitioning according to the procedure of Folch et al. (20) and purified by chromatography on DEAE-cellulose, as described previously (10). Its
concentration was determined by Dionex chromatography, as described below.
Chemical Synthesis--
By using dolichol kindly provided by Dr.
Tadeusz Chojnacki of the Institute of Biochemistry and Biophysics,
Warsaw, Poland, GlcNAc-P-P-dolichol was initially synthesized by the
method of Imperiali and Zimmerman (21), which requires azeotropic
drying (toluene or pyridine) at the stage of the oxalyl
chloride-mediated coupling of dolichol phosphate to the
per-O-acetyl-GlcNAc-P pyridinium salt. Acceptable yields of
the latter intermediate could be obtained only by careful azeotropic
drying of all commercial ingredients (including tetraethylammonium
chloride and dibenzylphosphate) and use of freshly distilled solvents.
In the published method (21), oxalyl chloride activation of dolichol
phosphate generates the highly activated dolichylphosphoryl dichloride,
which actually is an intermediate in the POCl3-mediated
preparation of dolichol phosphate but which could not successfully be
coupled directly to the protected GlcNAc-P, and was instead hydrolyzed
to dolichol phosphate, which was then purified and reactivated with
oxalyl chloride. During this study, it was found that the requisite
dolichylphosphoryl dichloride could in fact be generated from dolichol
in a directly usable form using excess POCl3 in hexane,
followed by a brief extraction with water to remove
HOPOCl2, and then evaporation of hexane and remaining
POCl3 under high vacuum. Following coupling, purification
of the protected pyrophosphate prior to NaOMe-mediated deacetylation
was achieved by silica gel 60 column chromatography using
CHCl3/MeOH/H2O (65:25:4, by volume) as the
eluant. These modifications, which avoid the need to isolate and purify
dolichol phosphate, resulted in the best overall yield of
GlcNAc-P-P-dolichol from dolichol.
The enzymatically and chemically synthesized GlcNAc-P-P-dolichol
functioned in a similar manner in these studies.
Large Scale Preparation of Mannosyl-P-dolichol--
Large scale
preparations of [14C]Man-P-Dol were made by incubating
dolichol phosphate, GDP[14C]mannose (1.7 dpm/pmol),
buffer, and metal ions as described previously (12) with extracts from
Micrococcus luteus provided by Dr. Charles J. Waechter and
Dr. Jeffrey S. Rush of the Department of Biochemistry, University of
Kentucky College of Medicine, Lexington, KY, or a purified, recombinant
yeast dolichyl-P-synthase from yeast provided by Dr. John S. Schutzbach, Department of Biochemistry, University of Alabama,
Birmingham, AL. Purification was carried out by chromatography on
DEAE-cellulose acetate as described previously (22, 23), followed by
preparative thin layer chromatography at 4 °C on 0.5-mm thick plates
of Silica Gel 60 (Merck) as described previously (10). As indicated by
guide strips, the Man-P-dolichol region was scraped from the plates and
recovered by leaching the gel in the cold with C/M
(chloroform/methanol)/water (10:10:3) followed by C/M (2:1). After
solvent partitioning by the procedure of Folch et al. (20),
the concentration of [14C]Man-P-Dol was calculated from
the specific activity of GDP[14C]mannose used in its preparation.
Incubation Conditions and Assay, Kinetic Studies
GlcNAc Lipid Biosynthesis--
Incubations were carried out for
10-20 min at 37 °C in the presence of dolichol phosphate (16-20
µM), Triton X-100 (0.15%), UDP-[3H]GlcNAc
(52 µM; 169 dpm/pmol), MgCl2 (27 mM), showdomycin, or N-benzyl-2'-deoxyshowdomycin, as indicated, and enzyme
(0.2-0.25 mg of protein) in a total volume of 0.15 ml (basal
conditions). Reactions were also carried out in the presence of
Man-P-Dol (2.1-6.4 µM) (stimulatory conditions). The
incubations were performed in the absence or presence of exogenously
added GlcNAc-P-P-dolichol or GlcNAc-GlcNAc-P-P-dolichol (as indicated
in the tables and figures). The dolichol derivatives were evaporated to
dryness with nitrogen, vortexed vigorously with 0.015 ml of 1.5%
Triton X-100, after which the other components of the reaction mixture were added. The incubations, carried out at 37 °C, were started by
the addition of the enzyme preparation and stopped by the addition of
C/M (2:1). After solvent partitioning by the Folch procedure (20) the
radioactivity in the washed lower phase was determined by scintillation
spectrometry, as described previously (7, 10).
Effect of GlcNAc-P-P-dolichol on Man-P-Dol
Formation--
Embryonic chick retina microsomes were incubated at
37 °C for 15 min in a medium containing
GDP-[3H]mannose (1.9 µM, 200 dpm/pmol),
dolichol phosphate (16 µM), MnCl2 (20 mM), Triton X-100 (0.2%), Tes buffer (0.2 M,
pH 7.45), in the presence or absence of GlcNAc-P-P-dolichol (as
indicated), and enzyme in a total volume of 0.15 ml, as described
previously (24). The products were analyzed by scintillation
spectrometry after Folch washing, as described above.
Dilutions of purified, full-length, recombinant yeast Man-P-Dol
synthase (25) were made in a
buffer3 containing 10%
glycerol, 0.015 M Tris-HCl, pH 7.5, 1% Nonidet P-40, 2 mM dithiothreitol, and 2 mg/ml bovine serum albumin (the latter acted to stabilize the enzyme upon dilution). Incubations were
carried out at 37 °C for 10 min essentially as described by
Schutzbach et al. (25) in a medium containing 0.5% Nonidet P-40 (w/v), 25 mM Tris-HCl, pH 7.5, 5 mM
MnCl2, 2.5 mM MgCl2, 0.25 mM EDTA, 5 mM dithiothreitol, 32 µM dolichol phosphate, GDP-[3H]Man (18 µM, 12-22 dpm/pmol) in the presence or absence of
GlcNAc-P-P-dolichol (as indicated) and enzyme in a total volume of 0.15 ml. The products were analyzed by scintillation spectrometry after
Folch washing, as above.
Dionex Chromatography--
After incubation followed by solvent
partitioning as above, the material in the washed organic phase was
evaporated to dryness and subjected to mild acid hydrolysis in 1 ml of
0.1 N HCl in 80% tetrahydrofuran for 100 min at 50 °C
as described previously (26). After evaporation to dryness and
redissolving in water, the material was applied to a column containing
0.5 ml each of AG-2-X8 (200-400 mesh) acetate and AG-50-X8 H+
(200-400 mesh), the column eluted with 20 ml of water, the eluate
evaporated to dryness, and the residual material redissolved in water
as described previously (16). To an aliquot was added 5 nmol of fucose
to serve as an early eluting reference marker and 10 nmol each of GlcNAc and GlcNAc-GlcNAc to serve as internal standards for analysis by
high pH anion exchange chromatography (Dionex Corp., Sunnyvale, CA).
The mixture was injected onto a CarboPAc 1 column (4 × 250 mm)
with a Carbo PAc guard column (3 × 25 mm) and eluted
isocratically with a mixture of 25% of 100 mM NaOH plus
75% 1 mM NaOH at a flow rate of 1 ml/min. The elution of
the standards was followed by pulsed amperometric detection (high pH
anion exchange chromatography-pulsed amperometric detection), and the
products of the reactions by measuring their radioactivity by
scintillation spectrometry of 0.5-ml fractions collected from the
pulsed amperometric detection cell, as described previously (27).
Distribution of Radioactivity in the Glucosaminyl Residues of the
Biosynthesized GlcNAc Lipids
The relative contributions of GPT-1 and GT-2 was investigated by
analyzing the distribution of the tritium label in the GlcNAc residues
of their respective products, GlcNAc-P-P-dolichol and GlcNAc-GlcNAc-P-P-dolichol, as described previously (28, 29). In short,
this involves the following procedures carried out sequentially. After
incubation, the GlcNAc lipids extracted into the chloroform-rich layer
after solvent partitioning are subjected to mild acid hydrolysis. GlcNAc and GlcNAc-GlcNAc thus formed are separated by paper
chromatography, recovered from the chromatogram, and reduced with
NaBH4. After mixed bed ion exchange chromatography, strong
acid hydrolysis N-deacetylates the products and cleaves
chitobiose. The products are then subjected to high voltage paper
electrophoresis in 1% sodium borate buffer, the electrophoretogram cut
into 1-cm zones, and the radioactivity determined by scintillation
spectrometry. The mobilities of standard
[3H]GlcNH2 and
[3H]GlcNH2OH were determined in the same
manner. By these procedures glucosaminitol would have been derived from
GlcNAc-P-P-dolichol after hydrolysis and glucosamine from the
non-reducing end of GlcNAc-GlcNAc-P-P-dolichol after hydrolysis and
glucosaminitol from the reducing end.
Other Analytic Procedures
The concentration of GlcNAc-P-P-dolichol was determined after
mild acid hydrolysis, as above, by quantitative Dionex chromatography of the liberated GlcNAc and by the Morgan-Elson reaction as described by Reissig et al. (30). The concentration of
GlcNAc-GlcNAc-P-P-dolichol, provided by Dr. B. Imperiali, Division of
Chemistry and Chemical Engineering, California Institute of Technology,
Pasadena, CA, was determined by Dionex chromatography of
N,N'-diacetylchitobiose liberated by mild acid hydrolysis.
The concentration of dolichol phosphate and the GlcNAc-P-P-dolichol
used in the early phases of this work (provided by Dr. Imperiali) was
determined by analysis for total phosphate as described previously
(10). Total microsomal phospholipids were determined in a similar
manner after solvent partitioning (20) of retina microsomes. Thin layer
chromatography was performed using 20 × 20-cm glass plates
precoated with a 0.25- or 0.50-mm layer of Silica Gel 60 without
fluorescent indicator. The following solvent systems were used: 1)
chloroform/methanol/acetic acid/water (25:15:4:2, by volume); 2)
chloroform/methanol/ water (65:25:4, by volume). The location of
radioactive material was accomplished by measuring the radioactivity by
scintillation spectrometry of 1 × 3-cm zones scraped from the
chromatogram. The migration of non-radioactive material was detected by
the anisaldehyde spray reagent or by exposure to iodine vapor, as
described previously (24).
Rationale for Using Showdomycin
Incubations carried out using dolichol phosphate and
UDP-[3H]GlcNAc as substrates would result in the
formation of [3H]GlcNAc-P-P-dolichol and
[3H]GlcNAc-[3H]GlcNAc-P-P-dolichol. Thus,
in assays carried out by solvent partitioning, any effect added
compounds might have specifically on the new synthesis of
[3H]GlcNAc-P-P-dolichol would be masked by the
accompanying formation of the labeled chitobiosyl product. This
difficulty was resolved by carrying out the incubations in the presence
of the nucleoside antibiotic, showdomycin, which inhibits the formation
of the chitobiosyl compound, enhancing the formation of
GlcNAc-P-P-dolichol (19). The N-benzyl-2'deoxy derivative
was shown to have the same effect (19). Thus, using concentrations of
the showdomycins that extensively inhibited the formation of
GlcNAc-GlcNAc-P-P-dolichol, the effect of exogenously added
non-radioactive GlcNAc-P-P-Dol on the de novo synthesis of
the labeled compound could be readily determined.
Kinetics of Inhibition
Apparent Ki and Vmax
values were calculated from a non-linear least squares analysis of the
data using GraFit (31) fit to an expression for general inhibition
derived from Equation 1 for mixed inhibition with a constant substrate
concentration.
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
Analyses of the types of inhibition were carried out in the
following manner. The steady state kinetic data were fitted using the
unweighted non-linear least squares method implemented in the computer
program GraFit (31). Inhibition constants were determined by a global
fit of the data from an entire experiment. The best fit of the data is
one that minimizes the sum of the square of the observed and calculated
velocities for an entire data set (32). The standard deviations of the
data points were within 3% of the highest velocity. The data were
initially fitted to Equation 2 for non-competitive or mixed inhibition.
By using the criterion that if the standard error of the slope or
intercept inhibition constants were over 50% of the fitted value, that
parameter was excluded from the final fit. If so, the data were then
fit to Equation 3 or Equation 4 for competitive and uncompetitive inhibition, respectively. The more restrictive mechanism was accepted if the
(Eq. 1)
-squared value was not increased by omitting the poorly defined inhibition constant.
(Eq. 2)
(Eq. 3)
(Eq. 4)
Kinetics of Activation by GlcNAc-P-P-dolichol of Man-P-Dol Synthesis
Incubations were carried out under initial rate conditions for
the yeast and retina microsomal enzymes. Apparent Ka and Vmax values were calculated from
Lineweaver-Burk double-reciprocal plots of the data after analysis by
computer using the Kcat program (BioMetalics, Princeton, NJ).
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RESULTS |
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Inhibition by GlcNAc-P-P-dolichol of GlcNAc Lipid Synthesis, Product Identification
Incubations were carried out under optimal conditions of GlcNAc
lipid synthesis as described under "Experimental Procedures" in the
presence or absence of exogenously added GlcNAc-P-P-dolichol. The
incubation mixtures additionally contained concentrations of
showdomycin that inhibited 93-99% of the formation of
GlcNAc-GlcNAc-P-P-dolichol. As seen in Fig.
1A, with increasing
concentrations of GlcNAc-P-P-dolichol there was increasing inhibition
(over 70%) of GlcNAc lipid synthesis. This effect on
GlcNAc-P-P-dolichol biosynthesis occurred at the basal level and when
the reaction was performed in the presence of Man-P-Dol shown
previously to greatly stimulate its formation (10). In these studies,
either under basal or stimulatory conditions, exogenously added
GlcNAc-P-P-dolichol was present over a range from 2- to 86-fold over
the [3H]GlcNAc-P-P-dolichol formed in the absence of the
inhibitor. (The curves in Fig. 1 were drawn in accord with
an analysis of the data by Equation 1 as described under
"Experimental Procedures.")
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The nature of the products formed under these conditions after analysis
by Dionex chromatography is seen in Fig.
2. Fig. 2A shows a typical
example of the distribution of the mono-GlcNAc and chitobiosyl products
formed under basal conditions in the absence of showdomycin. As seen in
Fig. 2B, under basal conditions in the presence of
showdomycin, there was now extensive inhibition of the formation of the
chitobiosyl product (solid line) and an increase in the
formation of GlcNAc-P-P-dolichol (solid line) as described
previously (19). When the reaction was carried out in the presence also
of exogenously added GlcNAc-P-P-dolichol (18 µM), there
was now an 86% decrease (diamond symbols) in the de
novo formation of [3H] GlcNAc-P-P-dolichol.
Exogenously added GlcNAc-P-P-dolichol was present in 360-fold molar
excess over the [3H]GlcNAc-P-P-dolichol formed in its
absence.
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Similar results were obtained when the reactions were performed under stimulatory conditions, i.e. in the presence of Man-P-dolichol (Fig. 2C). The formation of GlcNAc-GlcNAc-P-P-dolichol under these conditions was reduced 97% in the presence of showdomycin (filled circles). When the reaction was carried out in the presence also of exogenously added GlcNAc-P-P-dolichol (18 µM), the formation of [3H]GlcNAc-P-P-dolichol was decreased 88% (diamonds). The added GlcNAc-P-P-dolichol was present in 56-fold molar excess over that formed in its absence.
Inhibition by GlcNAc-GlcNAc-P-P-dolichol, Product Identification
The reaction between GlcNAc-P-P-dolichol and UDP-GlcNAc catalyzed by GT-2 results in the formation of the chitobiosyl derivative. As seen in Fig. 1B, when GlcNAc lipid synthesis was examined in the presence of exogenously added GlcNAc-GlcNAc-P-P-dolichol, inhibition of about 90% of that formed in the absence of the inhibitor was attained. As with the mono-GlcNAc derivative (Fig. 1A), inhibition was also induced and to a similar extent when the reaction was stimulated by the addition of Man-P-Dol as seen also in Fig. 1B. Shown in Fig. 2D is an identification of the products from experiments of this type using Dionex chromatography. The presence of showdomycin resulted in the essentially complete (96%) inhibition of the formation of the chitobiosyl derivative. When the incubation was performed in the presence also of exogenously added GlcNAc-GlcNAc-P-P-dolichol (diamond symbols), the formation of GlcNAc-P-P-dolichol was inhibited 94% of that formed in its absence. In this experiment, a 230-fold molar excess of GlcNAc-GlcNAc-P-P-Dol was added over the GlcNAc-P-P-dolichol formed in its absence.
The identification by Dionex chromatography of the products of the reactions under stimulatory conditions (+Man-P-dol) is seen in Fig. 2E. As under basal conditions the presence of showdomycin inhibited the formation of the chitobiosyl derivative 99% of that formed in its absence. In the presence also of exogenously added GlcNAc-GlcNAc-P-P-dolichol, the synthesis of GlcNAc-P-P-dolichol was inhibited 67% (diamonds). In this experiment a 42-fold molar excess of GlcNAc-GlcNAc-P-P-dolichol was added over the GlcNAc-P-P-dolichol formed in its absence.
A summary of the apparent Ki and Vmax values4 generated by these inhibition studies is shown in Table I.
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Other Characteristics of the System, Inhibition Studies in the Absence of Showdomycin
A series of experiments was performed to see if inhibition would also occur in the absence of showdomycin. As described previously, the simultaneous production of radioactive GlcNAc-P-P-dolichol and GlcNAc-GlcNAc-P-P-dolichol would prevent merely looking for a loss of dpm in the organic phase after solvent partitioning as an assay to reveal the influence of added GlcNAc lipids on the formation of the mono-GlcNAc derivative. In order to investigate this without blocking the formation GlcNAc-GlcNAc-P-P-dolichol (as affected by showdomycin in these studies), the isolation and analysis of the individual components of the reactions was performed as described under "Experimental Procedures." The net accumulation of [3H]GlcNAc-P-P-dolichol reflects the difference between its rate of formation and the rate of conversion to the chitobiosyl derivative. As seen in Table II, part A, at the basal level, in the absence of showdomycin, the addition of GlcNAc-GlcNAc-P-P-dolichol (19 µM) resulted in extensive net inhibition (74%) of GlcNAc-P-P-dolichol formation. Inhibition was also brought about by the chitobiosyl derivative under stimulatory conditions (+Man-P-dol) in which similar and extensive inhibition occurred in the presence or absence of the antibiotic as seen in Table II (part B, lines 1 and 2). Likewise, under stimulatory conditions in the absence of showdomycin where the presence of Man-P-Dol enhanced the uninhibited rate of [3H]GlcNAc-P-P-dolichol formation about 7-fold (Table II, part D, lines a and b), exogenously added GlcNAc-P-P-dolichol inhibited the stimulatory response 62% (Table II, part D, lines b and c). The latter response, however, may not indicate a direct effect on GPT-1 at the basal level. Indeed, at the basal level using exogenously added GlcNAc-P-P-dolichol (18 µM) as the test substance, apparent stimulation rather than inhibition was detected in the absence of showdomycin, as seen in Table II (part C, line 1, lines a and b). Similar results were encountered using 2.9 and 9 µM GlcNAc-P-P-dolichol (data not shown). The reason for this apparent stimulation is, at least in part, accounted for by the isotope dilution effect of exogenously added unlabeled GlcNAc-P-P-dolichol (300-700-fold) preventing the conversion of [3H]GlcNAc-P-P-dolichol to [3H]GlcNAc-[3H]GlcNAc-P-P-dolichol. The chitobiosyl derivative formed under these conditions is predicted to be largely [3H]GlcNAc-GlcNAc-P-P-dolichol. Because only a small fraction of the total GlcNAc-P-P-dolichol is converted to the chitobiosyl derivative, the isotope dilution results in almost all of the enzymatically synthesized [3H]GlcNAc-P-P-dolichol being trapped. These effects can be confirmed by kinetic modeling of the reactions and numerical integration (33). We have modeled the GPT-1 and GT-2 system using the kinetic constants determined in this study to show that the increase in radioactivity observed in Table II, part C, line 1, lines a and b, is predicted by isotope dilution and fully consistent with inhibition of GPT-1 by GlcNAc-P-P-dolichol (data not shown).5 In addition to this theoretical examination, this situation was examined further experimentally, as described below.
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Distribution of Label
The trapping of [3H]GlcNAc-P-P-dolichol by isotope
dilution was examined by determining the distribution of radioactivity
in the glucosaminyl residues of the GlcNAc lipids formed in the absence of showdomycin. The results from these experiments are presented in
Fig. 3 showing the patterns obtained by
high voltage paper electrophoresis after processing the products as
described under "Experimental Procedures." Fig. 3, A and
B, refers to the labeling that occurred from incubations
that contained exogenously added GlcNAc-P-P-dolichol. The material in
Fig. 3A is derived from the GlcNAc region of the paper
chromatogram and shows glucosaminitol as the major labeled component.
This would be the derivative formed from GlcNAc-P-P-dolichol
synthesized de novo during the incubation. The relatively
small amounts of labeled GlcNH2 in Fig. 3A most likely are due to the presence of contaminating GlcNAc-GlcNAc that
accompanied the GlcNAc region when cut and eluted from the paper
chromatogram. The source of the labeled peak material in Fig.
3B is chitobiose recovered from the paper chromatogram
showing the greatly enhanced labeling in GlcNH2 derived
from the non-reducing end of
[3H]GlcNAc-GlcNAc-P-P-dolichol formed by the addition of
[3H]GlcNAc to the exogenously added GlcNAc-P-P-dolichol.
Fig. 3, C and D, indicates the labeling that
occurred from incubations carried out under basal conditions,
i.e. in the absence of exogenously added
GlcNAc-P-P-dolichol. The material in Fig. 3C comes from processing the GlcNAc region of the paper chromatogram. As with Fig.
3A, labeled glucosaminitol in Fig. 3C arises from
de novo synthesized GlcNAc-P-P-dolichol and the small amount
of GlcNH2 from incompletely resolved chitobiose after paper
chromatography. The material in Fig. 3D is derived from
processing the material in the GlcNAc-GlcNAc region of the
chromatogram. As seen in Fig. 3D, under basal conditions
glucosamine derived from the non-reducing end of the chitobiosyl
derivative and glucosaminitol from the reducing terminus were labeled
to a similar extent, consistent with both sugar residues originating
directly from the same donor source, i.e.
UDP-[3H]GlcNAc, and the reaction approaching isotopic
equilibrium under the conditions of this experiment. In contrast, in
the presence of exogenously added GlcNAc-P-P-dolichol (Fig.
3B), no discernible peak was detected in the
GlcNH2OH region as would be predicted if the exogenously
added unlabeled GlcNAc-P-P-dolichol was the major, if not only, species
converted to the chitobiosyl derivative. Thus, the experimental
evidence supports the previous suggestion that the apparent lack of
inhibition of formation of [3H]GlcNAc-P-P-dolichol that
occurred in the presence of exogenously added GlcNAc-P-P-dolichol under
basal conditions in the absence of showdomycin reflects the competition
by the large excess of unlabeled exogenously added GlcNAc-P-P-dolichol
to serve as a substrate for the synthesis of the chitobiosyl
derivative. When the synthesis of the chitobiosyl derivative is
inhibited as with the use of showdomycin, these additional influences
are eliminated, and the inhibitory effect is directly seen.
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The presence of detergent in the incubation mixtures argues against the possibility that the difference in response to showdomycin at the basal level was due to the presence of different pools of added versus newly synthesized GlcNAc-P-P-dolichol.
Influence of Mild Acid Treatment of GlcNAc Lipids; Influence of Potential Hydrolytic Products, Other GlcNAc Lipids
These studies have shown that exogenously added GlcNAc-P-P-dolichol and GlcNAc-GlcNAc-P-P-dolichol inhibit the de novo synthesis of GlcNAc-P-P-dolichol. The effect of these compounds was examined after they were subjected to mild acid hydrolysis. This was performed in 0.1 N HCl in the presence of 0.045% Triton X-100. After evaporation to dryness, incubations were performed in the presence of showdomycin as described under "Experimental Procedures." No inhibition of GlcNAc lipid synthesis by hydrolyzed GlcNAc-P-P-dolichol or hydrolyzed GlcNAc-GlcNAc-P-P-dolichol was observed as compared with controls carried out in the same manner.
The influence of potential products of the hydrolytic procedures was also examined. Under conditions where GlcNAc-GlcNAc-P-P-dolichol (0.015 mM) in the presence of showdomycin resulted in 86% inhibition of GlcNAc lipid synthesis, no inhibition occurred in the presence of 3-5-fold higher concentrations of GlcNAc-GlcNAc or GlcNAc, nor by a mixture of these compounds plus dolichol phosphate (1.4-fold excess) that had been exposed to the conditions of mild acid hydrolysis. Likewise, under conditions where GlcNAc-P-P-dolichol (0.0144 mM) in the presence of showdomycin brought about 75% inhibition of GlcNAc lipid synthesis, 4.6-fold higher concentrations of GlcNAc or GlcNAc-GlcNAc had no effect. The effect of very high concentrations of these compounds was also examined. Thus, in the presence of GlcNAc at a 1500-fold higher concentration over the apparent Ki value for GlcNAc-P-P-dolichol (see Table I) and GlcNAc-GlcNAc at 2400-fold higher concentration than the apparent Ki value for GlcNAc-GlcNAc-P-P-dolichol, 93-98% of control GlcNAc lipid synthesis was seen (four experiments). Likewise in the presence of dolichol phosphate at 55-86-fold excess over these apparent Ki values, 88% of control activity was observed. Thus, little or no inhibition was observed in the presence of these potential hydrolytic products.
Furthermore, the biosynthesis of GlcNAc lipids as described in these studies when carried out in the presence of tunicamycin (0.4 µg/ml) was blocked virtually 100% (data not shown). This observation argues against contributions to the effects described by compounds such as GlcNAc-containing glycosphingolipids or GlcNAc/glucosaminylphosphatidylinositides involved in glycophospholipid anchor biosynthesis (34).
These control studies support the proposal that the inhibitions observed were due specifically to the presence of the mono-GlcNAc and chitobiosyl-P-P-dolichol derivatives.
Stability of GlcNAc-GlcNAc-P-P-dolichol during Incubation
The possibility was examined that the inhibition of the formation of GlcNAc-P-P-dolichol by GlcNAc-GlcNAc-P-P-dolichol under these experimental conditions was due to the instability of the chitobiosyl derivative and its formation in situ of GlcNAc-P-P-dolichol which actually brought about the effect. GlcNAc-GlcNAc-P-P-dolichol (11.4 µM) was incubated for 20 min in the presence of UDP-[3H]GlcNAc, Tes buffer, Mg2+, microsomes, and tunicamycin (2 µg/ml) but in the absence of dolichol phosphate and showdomycin. The formation of [3H]GlcNAc-P-P-dolichol from the breakdown of the chitobiosyl derivative to dolichol phosphate would be prevented by tunicamycin. The amount of [3H]GlcNAc-GlcNAc-P-P-dolichol newly formed under these conditions would be equivalent to the amount of GlcNAc-P-P-dolichol derived from the degradation of the chitobiosyl substrate. By using this assay, it was demonstrated that 0.0262 µM GlcNAc-P-P-dolichol was formed from the initial 11.4 µM GlcNAc-GlcNAc-P-P-dolichol started with or only about 0.2% breakdown. In control incubations, exogenously added GlcNAc-P-P-dolichol (2.9 µM) incubated in the presence of showdomycin brought about 42% inhibition of de novo GlcNAc lipid synthesis compared with that formed in the absence of added GlcNAc-P-P-dolichol (data not shown). Thus, the material formed by the breakdown of GlcNAc-GlcNAc-P-P-dolichol (described above) would account for only about 0.4% inhibition.
Types of Inhibition
Two substrates, dolichol phosphate and UDP-GlcNAc, participate in
the formation of GlcNAc-P-P-dolichol. The steady state kinetics of this
reaction in the presence of the two intermediates of the dolichol
pathway which these studies have shown to inhibit its activity were
examined, and the data are summarized in Fig.
4. As seen in Fig. 4A, in the
presence of exogenous GlcNAc-P-P-dolichol added at 7.5- and 15-fold
higher concentrations than that produced in the absence of the
inhibitor, the data indicate that this inhibitor is competitive
versus UDP-GlcNAc, i.e. UDP-GlcNAc and
GlcNAc-P-P-dolichol compete for the same site or same form of the
enzyme. In contrast, (Fig. 4B) non-competitive or mixed type
inhibition was demonstrated versus dolichol phosphate. The
kinetics of inhibition by GlcNAc-GlcNAc-P-P-dolichol are seen in Fig.
4, C and D. When examined as a function of
variation in the concentration of dolichol phosphate, competitive
inhibition is seen (Fig. 4D). Variation in the concentration
of UDP-GlcNAc, however, revealed that GlcNAc-GlcNAc-P-P-dolichol is an
uncompetitive inhibitor versus UDP-GlcNAc (Fig.
4C) where the apparent Vmax and
apparent Km values are each changed to a similar extent, as indicated by the parallel lines. The inhibition
constants obtained from the non-linear least squares analysis are
tabulated in Table III.
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Stimulation by GlcNAc-P-P-dolichol of Man-P-Dol Biosynthesis
In view of previous observations that Man-P-Dol can stimulate GlcNAc-P-P-dolichol formation (7-15), and the present observation that exogenously added GlcNAc-P-P-dolichol can inhibit its own formation even when stimulated by Man-P-dol, it was of interest to examine the converse situation, i.e. the effect of GlcNAc-P-P-dolichol on Man-P-Dol synthesis.
Retina Microsomes--
Incubation of retina microsomes under
optimal conditions for Man-P-Dol formation, as described previously
(24) in the presence of exogenously added GlcNAc-P-P-dolichol, resulted
in an enhanced formation of Man-P-dol, as seen in Fig.
5A. From Lineweaver-Burk analyses of the data, apparent Ka and
Vmax values were calculated, as summarized in
Table IV. Thin layer chromatography in
solvent systems 1 and 2 of the radioactive product formed under these
conditions showed the presence of a single radioactive area that
migrated with purified, standard Man-P-dolichol (data not shown).
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Yeast Enzyme--
The stimulation by GlcNAc-P-P-dolichol of
Man-P-Dol synthesis was examined further using a purified, recombinant
yeast Man-P-Dol synthase (25). After incubation under initial rate
conditions, the same response was obtained as with the retina
microsomes as shown in Fig. 5B. From Lineweaver-Burk
analysis of the data, apparent Ka and
Vmax values were calculated, as summarized in Table IV. Thin layer chromatography in solvent systems 1 and 2 showed a
single radioactive component migrating with standard Man-P-Dol (data
not shown).
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DISCUSSION |
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In all eukaryotic organisms thus far investigated, the
biosynthesis of the core region oligosaccharide of asparagine-linked glycoproteins proceeds via the dolichol pathway. The following Reaction
1
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We have now observed other modulating influences on the initiating
reaction of the dolichol pathway with the finding that GlcNAc-GlcNAc-P-P-dolichol has a feedback-inhibiting influence on the
synthesis of its precursor, GlcNAc-P-P-dolichol, and in addition,
GlcNAc-P-P-dolichol itself can inhibit its own formation. These studies
were performed in the presence of the antibiotic showdomycin that
preferentially blocks the de novo synthesis of GlcNAc-GlcNAc-P-P-dolichol thus allowing ready analysis by solvent partitioning of the influence of the inhibitors on the synthesis of
labeled GlcNAc-P-P-dolichol without being masked by the production of
the labeled chitobiosyl derivative. Inhibition by these compounds was
detected at the basal level of synthesis of GlcNAc-P-P-dolichol and
also when the reaction is stimulated by Man-P-dol. In the absence of
showdomycin, inhibition was also demonstrated by the chitobiosyl
derivative under basal and stimulatory conditions and by
GlcNAc-P-P-dolichol under stimulatory conditions. The present studies
have also revealed that the formation of Man-P-Dol can be stimulated by
GlcNAc-P-P-dolichol. These influences on the initiating reaction of the
dolichol pathway are summarized in Scheme
1. The mutual stimulatory relationships
between Man-P-Dol and GlcNAc-P-P-dolichol can be modulated by the
inhibitory influences of GlcNAc-P-P-dolichol and
GlcNAc-GlcNAc-P-P-dolichol. These relationships, in addition to more
global influences such as the availability of substrates and
cofactors, may play roles in maintaining the steady state concentration
of the first intermediate of the dolichol pathway and thus of the
assembly of the oligosaccharide lipids required for the biosynthesis of
asparagine-linked glycoproteins.
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The biosynthesis of GlcNAc-P-P-dolichol involving an exchange of pyrophosphate bonds on either side of the equation should be readily reversible, as has been demonstrated (17, 18). Although the equilibrium constant for this reaction has not been reported, the results of the present studies have demonstrated that the inhibition of the formation of GlcNAc-P-P-dolichol, however, cannot be a function only of the concentration of the product driving the reaction backward by mass action. Rather, in addition to the latter effect (the quantitative contribution of which cannot be determined as yet), more subtle influences on the kinetics of this reaction are involved, as demonstrated in the present work.
A Kinetic Model for the Mechanism of UDP-GlcNAc:Dolichyl Phosphate
N-Acetylglucosamine 1-Phosphate Transferase (GPT-1)--
Since
patterns of product and substrate inhibition can provide a basis for
analyzing the order of additions of substrate and products (40), the
following model is suggested from the results of the kinetic studies
for the mechanism of action of GPT-1. The steady state kinetic studies
are all consistent with a sequential bi-bi mechanism with the feedback
inhibition by GlcNAc-GlcNAc-P-P-dolichol being caused by the formation
of a ternary dead-end complex with UDP-GlcNAc as shown in Scheme
2.
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The data that strongly corroborate the ordered addition and release of substrates are the competitive inhibition of GlcNAc-P-P-dolichol with UDP-GlcNAc as the varied substrate. This indicates that the binding of the sugar nucleotide and GlcNAc-P-P-dolichol is a mutually exclusive event, i.e. they compete for the same form of the enzyme. The initial addition of UDP-GlcNAc is further confirmed by the uncompetitive inhibition pattern with GlcNAc-GlcNAc-P-P-dolichol as the inhibitor. Uncompetitive inhibition arises when the inhibitor binding occurs subsequent to the binding of the varied substrate (40, 41). The competitive pattern of GlcNAc-GlcNAc-P-P-dolichol versus dolichol phosphate indicates that the inhibitor and the substrate compete to bind to the E·UDP-GlcNAc binary complex. The non-competitive inhibition by GlcNAc-P-P-dolichol versus dolichol phosphate is consistent with the mechanism in Scheme 2. This inhibition arises because GlcNAc-P-P-dolichol can bind to form an inhibitory complex whether dolichol phosphate is present at low or high concentrations. The magnitude of the Kii and Kis values (Table III) do not necessarily reflect only the affinity of GlcNAc-P-P-dolichol for a given enzyme form but are dependent on the fraction of the enzyme present in that form (40). It is anticipated that the specific Ki values determined in these studies will reflect a greater affinity, i.e. lower Ki than that determined in the activity assay (Table I) because the Kis and Kii terms reflect an extrapolation to substrate concentrations where a single enzyme form predominates, whereas with the activity assay employing substrates near their Km values several different enzyme forms will be present at steady state.
It might be argued that the data from 2.88 µM
GlcNAc-P-P-dolichol in Fig. 4A would suggest non-competitive
inhibition because drawing a line derived from an analysis of each
individual data point rather than as an entire data set will not
intersect at a common point on the y axis. If we were to
have concluded that this inhibition was non-competitive, a
non-statistically significant Kii of 5.8 ± 4.3 mM would have been obtained. The two characteristics of
being greater than the largest inhibitor concentration employed coupled
with the large standard error are the hallmarks of an unnecessary
kinetic parameter, i.e. one that is not required to accommodate the data (32). Concerning the magnitude of the deviations of the data points from the computed values, these systematic errors
are less than 1
, i.e. the systematic error is within the standard error or random variability of the assay. This variability is
reflected in the standard errors of the reported inhibition constants
of 10-25%.
The comparative results with GlcNAc-P-P-dolichol and GlcNAc-GlcNAc-P-P-dolichol could not be predicted a priori based on homology to the two substrates. GlcNAc-P-P-dolichol acts as an analog of UDP-GlcNAc as is apparent by the observed competitive inhibition, whereas GlcNAc-GlcNAc-P-P-dolichol acts as an analog of dolichol phosphate. The Kis of 0.16 µM for GlcNAc-GlcNAc-P-P-dolichol versus dolichol phosphate (Table III) suggests a specific binding. As can be seen in Table III comparing the Kis values, the additional GlcNAc residue of the chitobiosyl derivative must introduce specific additional interactions that permit it to bind to the dolichol phosphate site over 20-fold more tightly than GlcNAc-P-P-dolichol.
These studies may contribute to our understanding of mechanisms that
regulate the early events of glycoprotein biosynthesis, about which
much remains to be known.
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ACKNOWLEDGEMENTS |
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We thank the following individuals for their generous gifts of the indicated materials: Dr. Barbara Imperiali of the Department of Chemistry, University of California, for GlcNAc-GlcNAc-P-P-dolichol used in these experiments and for GlcNAc-P-P-dolichol used in the early studies; Dr. Charles J. Waechter and Dr. Jeffrey S. Rush of the Department of Biochemistry, University of Kentucky College of Medicine, Lexington, KY, for the extract of M. luteus, and Drs. John S. Schutzbach and W. Thomas Forsee, Department of Biochemistry, University of Alabama, Birmingham, AL, for the purified recombinant Man-P-dolichol synthase from yeast; Dr. Tadeusz Chojnacki of the Institute of Biochemistry and Biophysics, Warsaw, Poland, for dolichol used in the chemical synthesis of GlcNAc-P-P-dolichol; Dr. Sung Ho Kang, Department of Chemistry, Korea Advanced Institute of Science and Technology, Taejon, Korea, for the gift of D-(+)-showdomycin; Dr. R. S. Hosmane, Department of Chemistry and Biochemistry, University of Maryland Baltimore County, Baltimore, MD, for the gift of N-benzyl-2'-deoxyshowdomycin. Appreciation is expressed to Dr. Naiqian Niu for assistance during the early phases of this work.
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FOOTNOTES |
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* This work was supported in part by Grants EY00393 (to E. L. K.), GM36562 (to V. E. A.), and AG14249 (to L. M. S.) from the National Institutes of Health and by the Ohio Lions Eye Research Foundation, and Research to Prevent Blindness, Inc.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
¶ To whom correspondence should be addressed: Dept. of Ophthalmology, Rm. 653, Wearn Bldg., Case Western Reserve University School of Medicine, 11100 Euclid Ave., Cleveland, OH 44106. Tel.: 216-844-3613; Fax: 216-844-5812; E-mail: elk2@po.cwru.edu.
2 Preliminary reports of some of these studies have been made (Kean, E. L., Niu, N., and Imperiali, B. (1996) Glycobiol. 6, 740; Kean, E. L. (1997) Glycoconj. J. 14, (suppl) S35).
3 J. S. Schutzbach, personal communication.
4
Among the problems associated with studying
enzyme kinetics in mixed micelle systems is whether the kinetic
constants should be reported by concentration or as mole fractions. In
these experiments, the large excess of Triton X-100 (about 2.5 mM) relative to the dolichol substrates/inhibitors or
phospholipid added with the microsomes (0.24 µmol of total lipid
Pi/mg protein) ensures that their mole fractions are
proportional to their concentration, with a 1 µM
concentration corresponding to a mole fraction of 4 × 10
4.
5 A copy of this material will be made available upon request to Dr. E. Kean.
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ABBREVIATIONS |
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The abbreviations used are: GlcNAc-P-P-Dol, N-acetylglucosaminylpyrophosphoryldolichol; GlcNAc-GlcNAc-P-P-dolichol, N-acetylglucosaminyl-N-acetylglucosaminylpyrophosphoryldolichol; Man-P-dol, mannosylphosphoryldolichol; Tes, 2-{[tris(hydroxymethyl)methyl] amino}ethanesulfonic acid; GPT-1, UDP-GlcNAc:dolichyl-phosphate N-acetylglucosamine 1-phosphate transferase; GT-2, UDP-GlcNAc:GlcNAc-P-P-dolichol, N-acetylglucosamine transferase; C/M, chloro- form/methanol.
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REFERENCES |
|---|
|
|
|---|
| 1. | Hemming, F. W. (1995) in Glycoproteins (Montreuil, J. , Vliegenthart, J. F. K. , and Schachter, H., eds) , pp. 127-143, Elsevier Science Publishers B. V., Amsterdam |
| 2. |
Hayes, G. R.,
and Lucas, J. J.
(1983)
J. Biol. Chem.
258,
15095-15100 |
| 3. |
Lennon, K.,
Pretel, R.,
Kesselheim, J.,
te Hessen, S.,
and Kukuruzinska, M. A.
(1995)
Glycobiology
5,
633-642 |
| 4. |
Abeijon, C.,
and Hirschberg, C. B.
(1990)
J. Biol. Chem.
265,
14691-14695 |
| 5. |
Kean, E. L.
(1991)
J. Biol. Chem.
266,
942-946 |
| 6. |
Dan, N. D.,
Middleton, R. B.,
and Lehrman, M. A.
(1996)
J. Biol. Chem.
271,
30717-30724 |
| 7. |
Kean, E. L.
(1982)
J. Biol. Chem.
257,
7952-7954 |
| 8. | Kean, E. L. (1983) Biochim. Biophys. Acta 750, 268-273[Medline] [Order article via Infotrieve] |
| 9. | Kean, E. L. (1983) Biochim. Biophys. Acta 752, 488-490[Medline] [Order article via Infotrieve] |
| 10. |
Kean, E. L.
(1985)
J. Biol. Chem.
260,
12561-12571 |
| 11. | Kean, E. L., |