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J Biol Chem, Vol. 274, Issue 50, 35908-35913, December 10, 1999
§,
,
, and
From the
Department of Cell Biology and Neuroscience,
University of Texas Southwestern Medical Center, Dallas, Texas 75235 and the ¶ Howard Hughes Medical Institute, Department of Cell
Biology, Duke University, Durham, North Carolina 27710
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ABSTRACT |
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Recent studies suggest that the mobility of
clathrin-coated pits at the cell surface are restricted by an actin
cytoskeleton and that there is an obligate reduction in the amount of
spectrin on membranes during coated pit budding. The spectrin-actin
cytoskeleton associates with membranes primarily through ankyrins,
which interact with the cytoplasmic region of numerous integral
membrane proteins. We now report that the fourth repeat domain (D4) of
ankyrinR binds to the N-terminal domain of clathrin
heavy chain with high affinity. Addition of peptides containing the D4
region inhibited clathrin-coated pit budding in vitro. In
addition, microinjection of D4 containing peptides blocked the
endocytosis of fluorescent low density lipoprotein (LDL).
AnkyrinR peptides that contained repeat domains other than D4 had no effect on either in vitro budding or
internalization of LDL. Finally, immunofluorescence shows that ankyrin
is uniformly associated with endosomes that contain fluorescent LDL.
These results suggest that ankyrin plays a role in the budding of
clathrin-coated pits during endocytosis.
Recent studies on the mechanism of coated pit budding in
fibroblasts suggest that there is an obligate decline in plasma
membrane spectrin prior to completing the final stages of the budding
process (1). The decline in spectrin depends on the ability of annexin VI to bind spectrin and activate a calpain-like protease. When cells
are grown in the presence of calpain inhibitor I (ALLN), annexin
VI-dependent budding of clathrin-coated pits is arrested. The cells compensate by assembling a new population of coated pits that
can bud in the absence of annexin VI and no longer require spectrin
removal. The endosomes that form from these pits, however, have a
distinctly different trafficking pattern in the cell.
The spectrin-actin cytoskeleton lines the cytoplasmic surface of a
variety of cellular membranes including the endoplasmic reticulum,
Golgi apparatus, lysosome, plasma membrane, and an unknown vesicular
structure (2-5). At the plasma membrane, this cytoskeleton can control
membrane topology, elasticity, and membrane protein composition (5, 6).
Products of the three ankyrin genes (ankyrinR, B,G) provide
the primary linkage between spectrin-actin networks and the plasma
membrane. Ankyrins mediate this linkage through binding sites for both
the Ankyrin repeats are a well characterized motif that provides sites of
protein-protein interaction in numerous proteins (10). Nonankyrin
molecules that contain ankyrin repeats typically have 4-7 tandem
copies, and tandem arrays of repeats have been shown to fold
cooperatively into stable structures (11, 12). The 24 tandem repeats
found in ankyrins assemble into four folding domains of six repeats
each (13) and are believed to associate with the cytoplasmic domains of
at least seven unrelated membrane proteins (5). The binding sites for
two of these membrane proteins, neurofascin and the anion exchanger,
have been localized on the repeat domains. Surprisingly, both membrane
proteins interact with ankyrin at discrete, noncompeting sites that
require both repeat domains 3 and 4 (13, 14).
During a screen to identify new ankyrin-binding proteins, we discovered
that the D4 region of ankyrinR binds with high affinity to
the N-terminal domain of clathrin heavy chain. Because of the role of
spectrin in coated pit budding, we tested peptides containing D4 and
found that they specifically block annexin VI-dependent budding in vitro and prevent the uptake of LDL when
microinjected into cells.
Materials
Chromatography matrices were from Amersham Pharmacia Biotech.
0.4-µm size-selected, epoxy-activated, nonporous latex beads were
custom synthesized by Bangs, Inc. (Fishers, IN). pGEMEX plasmid was
purchased from Promega (Madison, WI). 125I-Labeled
Bolton-Hunter reagent was from ICN Radiochemicals (Costa Mesa, CA).
125I-Labeled streptavidin was from Amersham Pharmacia
Biotech. ALLN (Calpain I inhibitor) was from CalBiochem (La Jolla, CA).
Biotinylated horse anti-mouse IgG was from Vector Labs (Burlingame,
CA). The anti-ankyrin mAb1
was raised against the spectrin-binding domain of ankyrinB.
The clathrin polyclonal antibody was raised against red cell clathrin. The anti-clathrin mAb was a gift of Francis Brodsky. The anti-spectrin mAb was from Sigma. Alexa 568 goat anti-mouse was from Molecular Probes
(Eugene, OR). Aqua Poly/Mount was from Polysciences (Warrington, PA).
All tissue culture reagents were from Life Technologies, Inc. All other
chemicals were from Sigma. PMCA-LDL and HLPPS were prepared by standard
methods (15, 16).
Methods
General Methods--
SDS-polyacrylamide gel electrophoresis was
performed on 3.5-17% exponential gradient gels using the Fairbanks
buffer system (17). Ankyrin repeat peptides were expressed from
cDNAs derived from the ankyrinR gene using a T7
expression vector. Protein constructs were purified from expressing
bacteria by gel filtration and ion exchange chromatography as detailed
elsewhere (13). Truncated annexin VI AnxVI Brain Extract--
12 adult rat brains (25 g) were homogenized
in 100 ml of ice-cold lysis buffer containing 320 mM
sucrose, 5 mM Tris-HCl, pH 7.6, 2 mM EGTA, 1 mM DTT, 1 mM NaN3, and protease
inhibitors (5 µg/ml leupeptin, 5 µg/ml pepstatin, 100 µg/ml
phenylmethylsulfonyl fluoride, and 0.5 mM diisopropyl
fluorophosphate). Nuclei were removed by centrifugation for 10 min at
900 × g. Membranes were pelleted by centrifugation at
100,000 × g for 40 min. The supernatant from this spin
was designated as cytosol. The membrane pellet was washed in lysis
buffer and recentrifuged at 100,000 × g for 40 min.
Membranes were resuspended in 100 ml of lysis buffer followed by the
addition of 100 ml of ice-cold Triton X-100 buffer (5% v/v Triton
X-100, 0.2% phosphatidylcholine, 200 mM KCl, 20 mM Hepes, pH 7.5, 4 mM DTT, 1 mM
NaN3, and protease inhibitors) for 30 min on ice. The
solution was then centrifuged for 45 min on ice at 100,000 × g to remove insoluble material.
D4 Column--
The D4 column was loaded three times with the
Triton X-100 extract and washed with 10 column volumes of wash buffer
(2.5% v/v Triton X-100 0.02% phosphatidylcholine, 100 mM
KCl, 20 mM Hepes, pH 7.5, 2 mM DTT, and 1 mM NaN3). Bound proteins were eluted with
elution buffer (wash buffer plus 1 M NaBr). Peak fractions (30 ml) containing the 170 kDa band (clathrin heavy chain) were pooled,
dialyzed against column buffer (10 mM sodium phosphate, pH
7.2, 1 mM EDTA, 1 mM DTT, 1 mM
NaN3) overnight, loaded on a MonoQ column, and eluted with
a 0-500 mM NaBr gradient in column buffer. The peak
fractions (6 ml) were pooled and used for the binding assays detailed below.
Binding Assay--
Latex beads were coated with ankyrin peptides
as described previously (18). The beads were then resuspended in assay
buffer containing 10 mM Hepes, pH 7.4, 1 mM
EGTA, 1 mM DTT, 1 mM NaN3, 100 mM NaCl, 10 mg/ml BSA, and 0.1% Tween 20. D4 affinity
purified clathrin was labeled with 125I using the
Bolton-Hunter method. Affinities were measured by incubating increasing
concentrations of 125I-labeled clathrin with ankyrin
peptide derivitized beads in assay buffer for 3 h on ice.
125I-Labeled clathrin bound to the beads was separated from
unbound by centrifugation (10,000 × g for 15 min)
through a cushion of 10% sucrose in assay buffer. Both bound and
unbound fractions were counted and used to calculate saturation and
Scatchard plots. Nonspecific associations were assessed by raising the
concentration of NaCl to 500 mM in parallel assays.
Nonspecific interactions represented less than 10% total binding and
have been subtracted from the data presented. All measured values are
the means of triplicate experiments with a standard deviation
<5%.
Budding Assay--
Clathrin-coated pit budding and spectrin
removal were assayed in vitro as described previously (19).
Briefly, SV589 fibroblasts grown as described previously (20) were
attached to poly-L-lysine-coated coverslips by
centrifugation (1800 × g for 10 min) followed by incubation with ice-cold Eagle's minimum essential medium supplemented with 20 mM Hepes, pH 7.4, and 2% crystalline BSA for
1 h. The coverslips were then washed quickly with buffer A (50 mM Hepes, pH 7.4, 100 mM NaCl) and buffer B (25 mM Hepes-KOH, pH 7.0, 25 mM KCl, 2.5 mM magnesium acetate, 0.2 mM DTT) and finally
sonicated in buffer B on ice. The attached plasma membranes were washed three times with ice-cold buffer B. Budding was initiated by shifting to 37 °C for 10 min in the presence of budding mixture (buffer B
with 1 mg/ml inactivated bovine brain cytosol, 1 mM ATP,
150 µM CaCl2, and 1 nM annexin
VI) and the indicated concentration of ankyrin peptide. The membranes
were then washed three times with ice-cold buffer B, fixed for 15 min
with 3% paraformaldehyde in buffer B without DTT, and washed three
times with buffer C (10 mM sodium phosphate, pH 7.4, 150 mM NaCl, and 2 mM MgCl2). Coated
pit budding was measured as the amount of clathrin lost from the
membrane as determined using a radioimmune assay (RIA). Spectrin loss
was also assessed by RIA. RIAs were performed using mAb against either
clathrin or spectrin, a biotinylated horse anti-mouse IgG, and
125I-streptavidin as described previously (19). RIAs for
clathrin and spectrin were also performed on membranes that were only
washed and fixed. The counts from these RIAs were taken to be total
starting values. The percentage of clathrin or spectrin loss is
calculated as the ratio of scintillation counts from each experiment to
the total starting values.
LDL Uptake Assay--
SV589 fibroblasts were plated on
coverslips in Dulbecco's modified Eagle's medium plus 10% fetal
bovine serum and grown overnight. The medium was replaced with
Dulbecco's modified Eagle's medium plus 10% lipoprotein-depleted
human serum (HLPPS), and the cells were grown for 48 h. LDL uptake
was initiated by incubating cells in HLPPS medium containing 20 µg/ml
PMCA-LDL at 37 °C in a CO2 incubator for 30 min. The
coverslips were then washed twice with PBS, fixed with 3%
paraformaldehyde in PBS on ice for 15 min, washed four times with PBS,
and mounted with Aqua Poly/Mount.
Microinjection--
SV589 fibroblasts were plated on coverslips
as described above for the LDL uptake assay. The truncated annexin VI,
AnxVI Immunofluorescence--
Coverslips were washed twice with PBS,
fixed on ice for 15 min in 3% paraformaldehyde in PBS, washed four
times with PBS, permeabilized for 5 min on ice with 0.1% Triton X-100
in PBS, washed four times with PBS, and blocked by incubating for 30 min with 1% BSA in PBS. The primary antibody, a mAb directed against the spectrin-binding domain of ankyrinB was used as an
ascites fluid diluted 1:100 into 1% BSA in PBS. Coverslips were
incubated for 1 h at room temperature and washed with wash buffer
(0.1% BSA in PBS) three times, once for 15 min and twice for 5 min. Alexa 568-conjugated goat anti-mouse IgG was diluted to 4 µg/ml in
1% BSA in PBS and incubated with the coverslips for 1 h at room
temperature. The coverslips were then washed with washed as above.
Coverslips were mounted using Aqua Poly/Mount and viewed with a Zeiss
Photomicroscope III. The images shown are representative of the results
obtained in five separate trials.
The N-terminal Domain of Clathrin Heavy Chain Associates with
Repeat Domain 4 of Ankyrin--
In an effort to identify novel
ankyrin-binding proteins, we screened for proteins that could associate
with an affinity column made from the fourth repeat domain (D4) of the
membrane-binding domain of ankyrinR. The D4 affinity column
was constructed using a recombinant peptide that encompasses amino
acids 588-827 of ankyrinR. This region corresponds to a
chymotryptic fragment of the membrane-binding domain of
ankyrinR that contains repeats 19-24 as well as some
flanking sequences. A Triton X-100 extract of rat brain membranes was
passed over the D4 column (Fig. 1, lanes 1 and 2), after which the column was
extensively washed and eluted with a buffer containing 1 M
NaBr (lane 3). Coomassie Blue staining showed that the
eluate contained a prominent 170-kDa band along with several minor
proteins, including a doublet of 30-35 kDa. A protein of similar
molecular mass was retained on the D4 affinity column when cytosol was
loaded in place of the Triton X-100 extract (lane 6).
Further purification of the 170-kDa protein by MonoQ ion exchange
removed most contaminating bands from the Triton X-100 eluate with the
exception of the 30-35-kDa doublet (lane 7).
The identity of the 170-kDa protein was determined by microsequencing
of proteolytic products. Chymotryptic proteolysis of the 170-kDa band
generated two major products of 120 and 60 kDa. The 170- and 60-kDa
proteins appeared to have blocked N termini; however, the 120-kDa
product had an N-terminal sequence identical to an internal sequence of
rat clathrin heavy chain (microsequencing data not shown). The 170-kDa
protein was recognized by a clathrin-specific polyclonal antibody in
immunoblots and displayed a typical triskelion appearance in rotary
shadowing electron microscopic images (data not shown). The observed
doublet of 30-35 kDa that co-eluted with the 170-kDa band (Fig. 1,
lane 7) may correspond to the two light chains of the
clathrin triskelion, which have apparent molecular masses of 33 and 36 kDa (21).
Previous studies have shown that clathrin heavy chain can be cleaved by
proteolysis into two functionally distinct domains: a 120-kDa
C-terminal region, which forms the polygonal lattice in clathrin coats,
and a 60-kDa N-terminal domain that extends from the lattice toward the
membrane and interacts with AP2 (22),
The clathrin-binding site on ankyrinR was further
characterized by examining the ability of 125I-labeled, D4
affinity purified clathrin to associate with repeat domains immobilized
on latex beads. Fig. 3 shows that
125I-clathrin bound with high affinity to domain 2 (D2),
domain 4 (D4), and a peptide containing both domains 3 and 4 (D34).
Scatchard plot analysis of these three interactions indicated binding
affinities of 1, 12, and 5 nM, respectively (Fig. 3,
B and C). Surprisingly, 125I-clathrin
did not associate with peptides D12 (containing domains 1 and 2) or D23
(containing domains 2 and 3). The possibility that D12 or D23 are
unfolded or inactivated by the assay system is unlikely because
neurofascin and the anion exchanger, which also associate with D2, can
interact with D12 and D23 peptides in the same assay system (14,
18).
D4 Inhibits Annexin VI-dependent Coated Pit Budding in
Vitro--
Previous work suggests that the spectrin cytoskeleton may
be involved in annexin VI-dependent coated pit budding.
Spectrin is removed from immobilized plasma membranes concomitant with clathrin-coated pit budding, and the presence of either an
anti-spectrin IgG or the actin-binding domain of spectrin in the assay
blocks annexin VI-dependent coated pit budding (1). Because
spectrin binds to ankyrin (25) and the D4 region of ankyrin binds to clathrin (Fig. 3), we tested whether D4 affected coated pit budding using a radioimmune assay that measures the amount of clathrin on
immobilized plasma membrane (Fig. 4). In
this assay, addition of cytosol, ATP, and Ca2+ at 37 °C
causes about a 25% decline in the amount of clathrin on immobilized
fibroblast membranes. An additional 40-45% of the coated pits bud
when annexin VI is present in the budding reaction (19). The presence
of increasing amounts of either D4 (Fig. 4A,
ALLN, a short peptide that inhibits cysteine proteases, blocks annexin
VI-dependent clathrin-coated pit budding both in
vivo and in vitro. Fibroblasts treated with ALLN for at
least 30 min assemble a new population of coated pits that bud
independently of annexin VI (1). We compared the effects of D4 on
annexin VI-dependent and independent budding using
membranes prepared from fibroblasts treated without or with ALLN for
1 h, respectively (Fig. 4). The addition of 50 nM D4
or D34 to the budding assay caused greater than 50% inhibition of both
clathrin loss and spectrin removal from membranes of untreated
fibroblasts (Fig. 4, C and D, solid
bars). By contrast, the addition of these same peptides had no
effect on clathrin loss from membranes of fibroblasts that had been
treated with ALLN for 1 h (Fig. 4C, gray
bars). As shown previously (1), coated pit budding from membranes
of ALLN-treated fibroblasts was not accompanied by spectrin removal
(Fig. 4D, compare solid bars with gray
bars). Peptides D3 and D12, which did not bind clathrin, had no
effect on clathrin loss or spectrin removal from membranes isolated
from either treated (gray bars) or untreated cells
(solid bars). These findings suggest that the D4 region
specifically blocked annexin VI-dependent coated pit budding.
D34 Inhibits Internalization of PMCA-LDL--
Previously we
identified a dominate-negative acting annexin VI
(AnxVI Localization of Ankyrin to Endosomes Containing LDL--
Because
both the in vitro and in vivo assays for coated
pit budding indicated a function for the ankyrin repeat domain, we used
immunofluorescence to determine whether ankyrin was associated with any
membranes in the endocytic pathway. Cells that had been grown in the
absence of lipoproteins were incubated in the presence of fluorescent
LDL for 30 min before fixation and processing for immunofluorescence
using an antibody that recognizes the spectrin-binding domain of
ankyrinB (Fig. 6). The mAb
ankyrin had a punctate staining pattern in the cytoplasm of the cell in
addition to staining on the margins of the cell (Ankyrin).
PMCA-LDL was seen in numerous vesicular structures
(PMCA-LDL). A comparison of the two images (arrows) showed that nearly all of the vesicular structures
containing fluorescent LDL were positive for ankyrin.
This study provides the first evidence that ankyrins can associate
directly with clathrin and participate in annexin
VI-dependent, clathrin-mediated endocytosis. The N-terminal
domain of clathrin heavy chain contained the binding site for ankyrin.
The membrane-binding domain of ankyrinR contained two
binding sites for clathrin: a site on the second repeat domain (D2) and
a site on the fourth repeat domain (D4). The functional significance of
the site on D2 is unclear because clathrin was unable to bind peptides
containing D2 in combination with either D1 (D12) or D3 (D23). The
inability of clathrin to associate with D12 or D23 suggests that D1 and D3 may sterically hinder the ability of clathrin to associate with D2.
By contrast, domain 3 (D3) may strengthen the clathrin association with
D4 because the binding of clathrin to D34 had a 2-fold higher affinity
than to D4 alone. The D4 and D34 peptides inhibited budding from
membranes prepared from untreated but not ALLN-treated fibroblasts. One
possibility is that D4 competes with an endogenous ankyrin that
normally must bind to clathrin during annexin VI-dependent,
coated pit budding. This would explain why LDL uptake in
vivo was inhibited by microinjected D34 peptides and endosomes
containing fluorescent LDL are positive for ankyrin.
Coated pits are found in regions of the membrane rich in membrane
cytoskeletal elements (26-28), and rapid-freeze, deep-etch electron
microscopy shows actin-like filaments near clathrin lattices (29).
Recent studies using clathrin tagged with green fluorescent protein
indicate that the mobility of coated pits is restricted by an actin
cytoskeleton (30). This suggests there is a functional linkage between
coated pits and the cytoskeleton and annexin VI functions to disconnect
this linkage during budding. Ankyrin D4 peptides most likely block
budding by preventing the release of spectrin from the membrane.
Exactly how an interaction between ankyrin and clathrin regulates
annexin VI-dependent release of spectrin remains to be
determined. We were unable to detect ankyrin in coated pits, although
isolated brain-coated vesicles were positive for ankyrin (data not
shown). Nevertheless, nearly every endosome that contained fluorescent
LDL also was positive for ankyrin. It is possible that ankyrin binding
to clathrin delivers ankyrin to endosomes during the final phases of
the budding step.
We may not have detected ankyrin in coated pits by immunofluorescence
because only specific isoforms interact with clathrin, the reactive
epitope in ankyrin was masked, or the association of ankyrin with
clathrin is regulated. The C-terminal portion of ankyrin is highly
variable among its various isoforms, and this region appears to control
both the localization and binding specificity of individual ankyrin
isoforms. We have tested whether the two most prevalent ankyrin
isoforms in erythrocytes (band 2.1 and 2.2) can associate with
clathrin, and neither displays clathrin binding activity (data not
shown). Several additional ankyrin gene products are potential
candidates for an in vivo association with clathrin.
AnkyrinG119 contains the D34 region but only a 5-kDa
regulatory domain, suggesting that this C-terminal region may not
regulate the binding activities of this ankyrin (2).
AnkyrinG480 contains a complete membrane-binding domain and
a very large C-terminal region (9). Interestingly, indirect immunofluorescence has co-localized ankyrinG480 with
amphiphysin II at axonal initial segments and nodes of Ranvier, which
are rich in clathrin-coated pits (9, 27, 28, 31). Additional ankyrins
may associate with clathrin as a result of specific regulatory events.
A variety of kinases can modulate the binding activity of ankyrins by
phosphorylation (5). Proteolytic processing may also play a role
because the C-terminal region is highly sensitive to proteolysis and a
calpain-like protease is required for annexin VI-dependent
clathrin-coated pit budding in fibroblasts (1). Future work will
examine which ankyrin isoform is the in vivo partner for clathrin.
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-subunit of spectrin and the cytoplasmic domains of several
membrane proteins. Binding sites for these membrane proteins are
largely localized to the membrane-binding domain at the N terminus of
ankyrins. This highly conserved region of ankyrin is dominated by 24 tandem copies of a 33-amino acid motif that is commonly termed ANK
repeats or ankyrin repeats (7-9).
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EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
192 was
prepared as described previously (1). The D4 peptide corresponds to a
chymotryptic product of ankyrinR and encompasses amino
acids 588-827. The D4 affinity column was made by covalently coupling
100 mg of D4 to 20 ml of CNBr-activated Sepharose according to the
manufacturer's protocol (Amersham Pharmacia Biotech). SV40 transformed
human fibroblasts (designated SV589 cells) were grown in Dulbecco's
modified Eagle's medium supplemented with 10% v/v fetal bovine serum
and 20 mM Hepes, pH 7.4.
192 (the first 192 residues of annexin VI) and
ankyrin peptides D12 and D34 were dialyzed against a buffer containing
10 mM sodium phosphate, pH 7.2, 100 mM KCl, and
1 mM DTT. The protein solutions were then diluted with
buffer to 20 µM and combined with 20 mg/ml FITC-dextran
to a final concentration of 10 µM protein and 10 mg/ml
dextran. The solutions were then spun at 100,000 × g
for 30 min to remove any aggregates and microinjected into SV589 cells using an eppindorf micromanipulator microinjection system. The results
shown are cells representative of three separate microinjection experiments where at least 20 cells were examined per experiment.
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RESULTS
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

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Fig. 1.
A 170-kDa band from rat brain membranes and
cytosol binds repeat domain 4 of ankyrinR. A D4
affinity column was loaded with either 200 ml of Triton X-100 extract
of rat brain membranes (lanes 1-3) or 100 ml of rat brain
cytosol (lanes 4-6), washed, and eluted with 1 M NaBr. Shown is a Coomassie Blue-stained
SDS-polyacrylamide gel electrophoresis gel that was loaded with 20 µl
of the following: lane 1, Triton X-100 extract load;
lane 2, Triton X-100 extract flow through; lane
3, eluted material from Triton X-100 extract load; lane
4, brain cytosol load, lane 5, brain cytosol flow
through; and lane 6, eluted material from cytosol load.
Lane 7 was run on a separate gel and contains 20 µl of the
peak fraction off a MonoQ purification of the material shown in
lane 3.
-arrestin (23), and the
NPXY sequence of the LDL receptor (24). To determine which
of these two regions contained the binding site for D4, D4 affinity
purified clathrin was digested with V8 Staphylococcus
protease at a 1:320 mass ratio for 16 h on ice, after which the
proteolytic reaction was stopped with 2 mM diisopropyl fluorophosphate. We then loaded the digest on a D4 affinity column (Fig. 2, lanes 1 and
2), washed the column, and eluted with 1 M NaBr
(lane 3). A 60-kDa product alone was specifically retained on the column, suggesting that the N-terminal domain of clathrin heavy
chain contains the binding site for D4.

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Fig. 2.
The N-terminal domain of clathrin heavy chain
binds repeat domain 4. D4 affinity purified clathrin (1 mg) was
digested with a 1:320 mass ratio of V8 protease for 16 h on ice. A
D4 affinity column was then loaded with the digest, washed, and eluted
with 1 M NaBr buffer. The indicated fractions (20 µl)
were run on an SDS-polyacrylamide gel electrophoresis gel and stained
with Coomassie Blue. Lane 1, digest loaded; lane
2, flow through; lane 3, eluted material.

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Fig. 3.
Clathrin binds repeat constructs D2, D4, and
D34. A, diagram of the domain structure of ankyrins.
The membrane-binding domain and spectrin-binding domain are highly
conserved between the three ankyrin genes. The C-terminal domain varies
widely between isoforms. B and C, clathrin was
assayed for the ability to associate with the following peptides: D1
(domain 1), D2 (domain 2), D3 (domain 3), D4 (domain 4), D12 (domains 1 and 2), D23 (domains 2 and 3), and D34 (domains 3 and 4). These
peptides contain the following amino acids from ankyrinR:
D1, residues 1-204; D2, residues 205-402; D3, residues 403-600; D4,
residues 588-827; D12, residues 1-402; D23, residues 205-600; and
D34, residues 403-827. Assays were performed by adding increasing
amounts of 125I-clathrin to ankyrin peptides immobilized on
latex beads as described under "Methods." 125I-Clathrin
bound to beads coupled with D2, D4, and D34. Binding affinities were
calculated from Scatchard plots (C) and are tabulated in
B. A dash indicates no binding activity was
detected between 125I-clathrin and the indicated
peptide.
) or D34
(Fig. 4A,
) in the budding assays containing cytosol, ATP, Ca2+, and annexin VI caused a progressive reduction in
the amount of clathrin lost. Inhibition plateaued at ~25% loss with
a half-maximal inhibition occurring at 30 and 20 nM,
respectively. D4 (Fig. 4B,
) and D34 (
) also blocked
spectrin removal with half-maximal inhibition at 15 and 10 nM, respectively. By contrast, addition of up to 320 nM of D3 (
) or D12 (
) had no effect on either
clathrin loss (A) or spectrin removal (B). D2 and
D23 could not be tested in this assay because they were not soluble in
low salt buffers.

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Fig. 4.
Effects of ankyrin repeat domains on coated
pit budding in vitro. A and
B, immobilized plasma membranes were incubated at 37 °C
for 10 min in the presence of budding mixture plus various
concentrations of the indicated ankyrin peptide. Clathrin loss
(A) and spectrin loss (B) from immobilized
fibroblast membranes were measured by RIA as described. C
and D, human fibroblasts were either grown in medium alone
(NT) or in medium containing 500 µM ALLN
(ALLN) for 1 h at 37 °C before immobilized plasma
membranes were prepared. In vitro budding was performed in
buffer B or budding mixture in the presence or absence of 50 nM of the indicated ankyrin peptide. Clathrin loss
(C) and spectrin loss (D) were measured by RIA as
described under "Methods." All values are the means of triplicate
measurements with a standard deviation of less than 10%.
192) corresponding to the first 192 amino acids of
the protein that inhibited coated pit budding in vitro (1). Microinjection of this peptide into fibroblasts markedly reduced the
internalization of fluorescent LDL. We used microinjection to see
whether peptides containing the D4 repeat would also inhibit LDL uptake
(Fig. 5). A buffer containing 10 mg/ml
FITC-labeled dextran, either with no additions (Buffer) or
with 10 µM peptide D12 (D12), D34
(D34) or peptide AnxVI
192 (
192)
added, was microinjected into SV589. Cells were allowed to recover for
30 min before 20 µg/ml PMCA-LDL was added, and the cells were further incubated for 30 min in HLPPS. The FITC-labeled cells were picked out,
and the amount of PMCA-LDL internalized was compared with surrounding
noninjected cells. The uptake of PMCA-LDL by cells injected with the
D12 peptide was normal (D12) and did not differ from cells
that received buffer alone (Buffer). As shown previously (1), uptake of LDL in cells injected with AnxVI
192 was markedly inhibited (
192). The D34 peptide
(D34) was nearly as effective as AnxVI
192 at
inhibiting LDL internalization.

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Fig. 5.
Microinjected ankyrin repeat D34 blocks LDL
internalization. A buffer containing 10 mg/ml FITC-labeled dextran
with either no additions (Buffer) or 10 µM
peptide D12 (D12), D34 (D34), or
AnxVI
192 (
192) was microinjected into
SV589. Cells were allowed to recover for 30 min before further
incubation in the presence of 20 µg/ml PMCA-LDL for 30 min. Cells
were then fixed and processed for microscopy. Microinjected cells were
identified by FITC fluorescence (left panels). Internalized
PMCA-LDL appeared as large vesicles scattered through out the cell
(right panels). Bar, 10 µm.

View larger version (84K):
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Fig. 6.
Co-localization of ankyrin and internalized
fluorescent LDL. SV589 cells grown on coverslips in HLPPS were
incubated in the presence of 20 µg/ml PMCA-LDL for 30 min. Cells were
then processed for immunofluorescence localization of ankyrin. The
left panel shows the distribution of ankyrin, and the
right panel shows the distribution of PMCA-LDL.
Bar, 10 µm.
![]()
DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
| |
ACKNOWLEDGEMENTS |
|---|
We gratefully acknowledge Judy Phelps for performing the microsequencing, Jonathon Davis for expertise in the rotary shadowing experiment, and Amanda McDaniel for assistance with the microinjection experiments.
| |
FOOTNOTES |
|---|
* This work was supported by National Institutes of Health Grants DK29808 and HL20948 and the Perot Family Foundation.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
§ To whom correspondence should be addressed: Dept. of Cell Biology and Neuroscience, University of Texas Southwestern Medical Center, Dallas, TX 75235-9039. Tel.: 214-648-2576; Fax: 214-648-7577; E-mail: Michaely@utsw.swmed.edu.
| |
ABBREVIATIONS |
|---|
The abbreviations used are:
mAb, monoclonal
antibody;
LDL, low density lipoprotein;
DTT, dithiothreitol;
BSA, bovine serum albumin;
RIA, radioimmune assay;
PBS, phosphate-buffered
saline;
FITC, fluorescein isothiocyanate;
PMCA, 3-pyrenemethyl-23,24-dinor-5cholen-22-oate-3
-yl oleate;
ALLN, N-Ac-Leu-Leu-norleucinal;
HLPPS, human lipoprotein poor
serum.
| |
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