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J Biol Chem, Vol. 275, Issue 12, 8959-8969, March 24, 2000
Structural and Functional Characterization of the Leukocyte
Integrin Gene CD11d
ESSENTIAL ROLE OF Sp1 AND Sp3*
John D.
Noti ,
Andrew K.
Johnson, and
Jill D.
Dillon
From the Guthrie Research Institute,
Sayre, Pennsylvania 18840
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ABSTRACT |
CD11d encodes the latest -subunit
of the leukocyte integrin family to be discovered, and it is expressed
predominantly in myelomonocytic cells. We have isolated a genomic clone
that contains CD11d and showed this gene to be 11,461 bp
downstream and oriented in the same direction as the related
CD11c gene. CD11d transcription begins 69-79
nucleotides upstream of the ATG codon. Transfection analysis of
CD11d-luc reporter constructs revealed that the
173 to +74 region is sufficient to confer leukocyte-specific
expression of luciferase in myelomonocytic cells (THP1 and HL60),
B-cells (IM9), and T-cells (Jurkat). Transfection analysis showed that down-regulation of CD11d expression by phorbol ester was
myelomonocyte-specific and is mediated by one or more
cis-elements within the 173 to +74 region. In
vitro DNase I footprint analysis and electrophoretic mobility
shift analysis showed that Sp1 and Sp3 bind at 63 to 40. Deletion
of the Sp-binding site significantly reduced CD11d promoter
activity. Overexpression of either Sp1 or Sp3 in THP1 cells led to
activation of the CD11d promoter even in the presence of
phorbol ester, whereas down-regulation of either factor by antisense
oligonucleotides decreased CD11d promoter activity. In
contrast, overexpression of Sp3 in IM9 and Jurkat cells down-regulated CD11d promoter expression. In vivo genomic
footprinting revealed that the 63 to 40 region is bound by a Sp
protein in unstimulated HL60 cells but not in phorbol ester-stimulated
HL60 cells. In contrast, this site is bound in both unstimulated and
phorbol ester-stimulated IM9 and Jurkat cells. Together, these results show that myelomonocyte-specific phorbol ester down-regulation of
CD11d is mediated through both Sp1 and Sp3.
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INTRODUCTION |
The integrins are a large family of membrane glycoproteins
composed of noncovalently associated - and -subunits that mediate cell-cell and cell-matrix interactions (1, 2). The
2-integrin, encoded by CD18 (3),
heterodimerizes with four distinct -subunits, encoded by
CD11a (4), CD11b (5), CD11c (6), and
the recently identified CD11d gene (7), which together
comprise the leukocyte integrin subfamily. Immune and inflammatory
responses including leukocyte migration, tumor cell killing,
phagocytosis, and the respiratory burst are highly dependent on
leukocyte integrin expression (8-12). Genetic mutations in the
2-subunit lead to loss of surface expression of these
integrins in patients with leukocyte adhesion deficiency (13), and
affected individuals characteristically present with severe and
recurrent life-threatening bacterial infections.
Surface expression of the leukocyte integrins differs with the
particular cell type. CD18 and CD11a are
expressed in all leukocytes (4, 12), whereas CD11b and
CD11c are predominantly myeloid (monocytes and
granulocytes)-specific (5, 6). CD11d is expressed moderately
on myelomonocytic cell lines and subsets of peripheral blood leukocytes
and strongly on tissue-specialized cells, including macrophage foam
cells within atherosclerotic plaques, and on splenic red pulp
macrophages (7). The functions of CD11d have not been determined in any detail; however, its expression in these two specialized cell types suggests that CD11d may play a role
in the atherosclerotic process such as clearing lipoproteins from plaques and in phagocytosis of blood-borne pathogens, particulate matter, and senescent erythrocytes from the blood. Differentiation of
myelomonocytic cell lines along the monocytic/granulocytic pathway with
phorbol esters results in increased transcription and subsequent
surface expression of all of the leukocyte integrins (14-19) except
CD11d, which undergoes down-regulation from the surface (7).
Analysis of the genomic sequences for CD11a,
CD11b, and CD11c showed these genes to be
controlled by transcription factors including c-Jun/c-Fos (20), PU.1
(21, 22), Ets (20), and CCAAT/enhancer-binding protein (23). Of
particular interest was the observation that the ubiquitous
transcription factor Sp1 binds the CD11b (24) and
CD11c promoters (25) in a cell-specific manner.
Only a partial genomic clone of the CD11d gene has been
reported (26), and by comparison with the structural organization of
the closely related CD11c gene, this clone contains only
exons 15-30. Forward and reverse oligonucleotide primers specific to the 3'-untranslated region of CD11c and the 5'-coding region
of CD11d were used in the polymerase chain reaction
(PCR)1 to demonstrate that
the CD11c gene lies approximately 11.5 kb upstream and in
the same orientation as CD11d (27). To understand the
molecular mechanisms responsible for expression of CD11d, we
isolated a human genomic clone containing the 3'- and 5'-ends of
CD11c and CD11d, respectively, and show that
these genes are separated by 11,461 bp of DNA and confirm their
orientation to be the same. We show that the 173 to +74 region of the
CD11d gene is sufficient to confer leukocyte-specific
expression in transfected cells that is dependent on both Sp1 and Sp3.
Last, we provide evidence that the Sp binding site within the 173 to +74 region is bound in vivo in both myelomonocytic and
nonmyelomonocytic cells and that loss of binding to this site leads to
myelomonocyte-specific down-regulation of CD11d expression
by phorbol ester.
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EXPERIMENTAL PROCEDURES |
Cell Culture--
The cell lines used were THP-1 (acute
monocytic leukemia, ATCC TIB-202), HL60 (promyelocytic leukemia, ATCC
CCL 240), IM-9 (B-cell multiple myeloma, ATCC CCL-159), Jurkat (T-cell
acute leukemia, ATCC TIB 152), MCF-7 (breast adenocarcinoma, ATCC
HTB-22), and Schneider's Drosophila 2 (Drosophila
melanogaster embryo, ATCC CRL 1963). THP-1, HL60, and Jurkat cells
were grown in RPMI 1640 medium containing 10% fetal calf serum
(Biofluids, Rockville, MD). IM-9 cells were grown in RPMI 1640 medium
containing 20% fetal calf serum (Biofluids). HeLa and MCF-7 cells were
grown in Dulbecco's modified Eagle's medium containing 10% fetal
calf serum (Biofluids). Drosophila Schneider 2 cells were
grown in Schneider's medium containing 10% insect-tested fetal calf
serum (Sigma). All media contained 100 units/ml penicillin and 100 units/ml streptomycin.
Isolation and Sequence Analysis of the CD11d 5'-Flanking
Region--
A human genomic cosmid library was previously constructed
from DNA isolated from peripheral blood leukocytes (28).
CD11c-positive clones were rescreened for the presence of
the CD11d gene by colony hybridization with an
oligonucleotide primer corresponding to the first 22 nucleotides of the
CD11d coding sequence. One clone contained exons 15-30 of
CD11c and exons 1-7 of CD11d and was completely
sequenced using the dRhodamine Terminator Cycle Sequencing Kit (PE
Applied Biosystems, Warrington, United Kingdom) and analyzed on an
automated ABI Prism 310 Genetic Analyzer.
RNase Protection, S1 Nuclease Analysis, and Primer Extension
Analysis--
The 381 to +74 region of CD11d was
amplified by PCR and cloned into the XhoI and
HindIII sites of pGEM-7Zf( ) (Promega). This clone was
linearized with XhoI and used as template in an in
vitro transcription system to prepare a 562-bp RNA probe
(Riboprobe; Promega) that spanned this region. The RNA probe was
labeled with [ -32P]UTP to a specific activity of
7 × 107 cpm/µg; loaded onto a 5% polyacrylamide, 8 M urea gel; and subsequently eluted into buffer containing
0.5 M ammonium acetate, 1 mM EDTA, 0.2% SDS.
Approximately 1-2 × 105 cpm of probe was annealed to
either 20 µg of total RNA from HL60 or yeast cells and hybridized in
20 µl of 80% deionized formamide, 100 mM sodium citrate,
pH 6.4, 300 mM sodium acetate, pH 6.4, 1 mM
EDTA for 16-18 h at 44 °C. Following hybridization, the annealed probe-RNA complexes were treated with various concentrations of RNase
A/T1 (Ambion, Inc., Austin, TX), extracted with proteinase K and
phenol/chloroform, and analyzed on a 5% polyacrylamide, 8 M urea gel.
For S1 nuclease analysis, a 247-nucleotide single-stranded DNA probe
corresponding to the 173 to +74 region of CD11d was prepared by extension of a 22-nucleotide-long primer on the luciferase reporter plasmid containing this region. The probe was end-labeled with
[ -32P]ATP (probe specific activity of 5.3 × 107 cpm/µg. Hybridization of the DNA probe, prepared with
the Prime-A-Probe Kit (Ambion), to either 500 ng of THP1
poly(A+) RNA or 20 µg of yeast total RNA and subsequent
digestion with S1 nuclease was performed according to the instructions
in the S1-Assay Kit provided by the manufacturer (Ambion). A second
antisense DNA probe, 99 nucleotides long with the 5'-end positioned 19 bp upstream of the ATG codon, was chemically synthesized, end-labeled with [ -32P]ATP (probe specific activity of 2.88 × 108 cpm/µg), and hybridized with HL60
poly(A+) RNA or yeast total RNA.
Primer extension analysis was performed essentially as described (28).
Briefly, 2.5 ng of a primer labeled with [ -32P]ATP
(specific activity of 1 × 109 cpm/µg) was
hybridized to either 500 ng of HL60 poly(A+) RNA, 25 µg
of HL60 total RNA, or 25 µg of yeast total RNA in 15 µl of 150 mM KCl/10 mM Tris-Cl, pH 8.3) for 3 h at
50 °C. Then 30.5 µl of a solution containing 29 mM
Tris-Cl, pH 8.3, at 42 °C plus 14.72 mM
MgCl2, 8 mM dithiothreitol, 6.75 mg of
actinomycin D, 0.2 mM each dATP, dTTP, dGTP, dCTP, 20 units
placental RNase inhibitor, 2.5 units of MuLV reverse transcriptase was
added, and incubation continued for 1 h at 42 °C. The probe-RNA
complexes were digested with RNase A/T1 (Ambion), extracted with
phenol/chloroform, and analyzed on a 5% polyacrylamide, 8 M urea gel.
Plasmids--
A series of 5'-unidirectional deletions of the
946 to +74 region of the CD11d promoter were prepared by
the PCR with oligonucleotide primers specific to this region and fused
to the firefly luciferase gene (luc) in plasmid pGL3-Basic
(Promega Corp., Madison, WI). The forward and reverse primers used in
the PCR contained XhoI and HindIII restriction
sites, respectively, for cloning of the final PCR product into
pGL3-Basic. The 500 to +93 region of the CD11a promoter
and the 196 to +30 region of the CD11c promoter were
prepared in a similar manner and ligated into pGL3-Basic (25, 29). A
primer containing a deletion of the Sp-binding site ( 63 to 40) was
used in the PCR to construct reporter plasmid CD11d( 173/+74)( 63/ 40)-luc. The plasmid
pPacSp1, which expresses Sp1 from the Drosophila actin
promoter, and the control plasmid pPacO, containing only the
Drosophila actin promoter, were generously provided by Dr.
R. Tjian. The construction of plasmids that express Sp2 and Sp3 from
the actin promoter (plasmids pPacSp2 and pPacSp3, respectively) were
previously described (29). The mammalian expression plasmids
pCMV4-Sp1/flu, pCMV4-Sp2/flu, and pCMV4-Sp3/flu, which express Sp1,
Sp2, and Sp3, respectively, from the cytomegalovirus early promoter,
were generously provided by Dr. J. M. Horowitz (30, 31). Plasmid
pCDNA I, containing only the cytomegalovirus early promoter, served
as control for the mammalian expression plasmids (Invitrogen, Carlsbad,
CA). The integrity of all constructs was verified by DNA sequence analysis.
Transfections and Reporter Assays--
Transfections of human
cells were performed by electroporation as described previously (28)
and analyzed with the Dual-Luciferase Reporter Assay System (Promega,
Madison, WI). Briefly, approximately 1 × 107 cells of
each leukocyte cell line or 2 × 106 of MCF-7 cells
were co-transfected with 15 µg of each firefly luciferase reporter
plasmid and 5 µg of pRL-SV40 Vector (Promega). The pRL-SV40 vector
contains Renilla luciferase driven by the early SV40
enhancer/promoter. This vector provided an internal control in which to
normalize expression from each firefly luciferase reporter.
Electroporated cells were transferred to tissue culture dishes
containing 15 ml of medium and, under certain conditions, phorbol
12-myristate 13-acetate (PMA; 10 ng/ml final concentration) was added
1 h later. The cells were harvested 24 h post-transfection, and luciferase activity was assayed. Firefly luciferase light output
was measured in a LB96V-2 Wallac Berthold plate luminometer and
normalized against Renilla luciferase from the cotransfected vector or against the total protein concentration in the cellular extract.
Cotransfections of Sp Expression Plasmids--
Mammalian cells
were transfected as described above with 15 µg of a firefly
luciferase reporter plasmid; 5 µg of pCMV4-Sp1/flu, pCMV4-Sp2/flu, or
pCMV4-Sp3/flu; and 3 µg of pRL-SV40. The total volume of the plasmid
transfection mix was adjusted to 25 µg with the control plasmid
pCDNA I. DNA was introduced into Drosophila cells by
calcium phosphate-mediated transfection as described previously (25).
Approximately 3 × 106 Drosophila cells
were transfected with 15 µg of a specific luciferase reporter plasmid
and 5 µg of pPacSp1, pPacSp2, or pPacSp3. The total volume of the
plasmid transfection mix was adjusted to 30 µg with the control
plasmid pPacO. The calcium phosphate-DNA precipitates were left on the
cells for 48 h prior to harvesting and assaying for luciferase
activity. Most transfections were performed in triplicate and repeated
two to three times to ensure reproducibility. Experimental data was
pooled and analyzed using Microsoft Excel and expressed as the
mean ± S.D.
In Vitro DNase I Footprinting Analysis--
The PCR was
performed to prepare a double-stranded probe to the 173 to +74
region, and one primer was labeled with [ -32P]ATP. The
probe was purified by electrophoresis through a 2% agarose gel onto
NA45-DEAE paper according to the manufacturer's instructions
(Schleicher and Schuell). Approximately 1-2 × 105
cpm of probe (1-2 ng) and either 50 µg of crude nuclear extract protein prepared as described (28) or 1 or 4 footprinting units (concentration determined by the manufacturer (Promega Corp., Madison,
WI) of purified Sp1 protein were incubated in a total volume of 50 µl
of binding buffer. The binding buffer contained 0 or 5 µg of
poly(dI-dC), 6.25 mM MgCl2, 50 mM
KCl, 0.5 mM EDTA, 10% glycerol, 0.5 mM
dithiothreitol, and 25 mM Tris-HCl, pH 8.0. After 15 min at
room temperature, 50 µl of 5 mM CaCl2/10
mM MgCl2, and 0.2-2 units of DNase I were
added. After 1 min at room temperature, the reaction was stopped with
90 µl of 0.2 M NaCl, 0.03 M EDTA, 1% SDS, 10 µg of Escherichia coli tRNA; phenol/chloroform-extracted; ethanol-precipitated; and analyzed on a sequencing gel.
Electrophoretic Mobility Shift Analysis (EMSA)--
EMSA was
performed as described previously (20). Nuclear extracts to be used in
EMSA were prepared as described (28). The following double-stranded
oligonucleotide probe was used: 5'-TGTTCCATAATTAACCACGCCCCTCCTACCCACTGTGCCCCTCTTCCTGC-3', corresponding to the 81 to 31 region of the CD11d promoter. The probe
was labeled with [ -32P]ATP and 2 × 104 cpm of probe was incubated for 30 min on ice with 5 µg of nuclear extract from either unstimulated or PMA-stimulated
THP1, IM9, or Jurkat cells. For supershift analysis, 1 µl of antibody
specific for Sp1, Sp2, or Sp3 (Santa Cruz Biotechnology, Inc., Santa
Cruz, CA) was added after incubation of the probe with protein. The reaction products were analyzed by polyacrylamide gel electrophoresis as described (20).
Sp1 and Sp3 Knock-out with Antisense Oligonucleotides--
The
following phosphorothioate-modified nucleotides were prepared and
HPLC-purified: 5'-GTGGCTGTGAGGTCAAGCTCACCTGT-3', a Sp1-specific antisense oligonucleotide positioned at Thr83 of the Sp1
mRNA (32); 5'-GGACCTCACTACGGATTATA-3', an Sp1-specific antisense
oligonucleotide positioned at Pro158 of the Sp1 mRNA
(32); 5'-AAGTAGCAGCACTTGGAATCTGGACT-3', an Sp3-specific antisense
oligonucleotide positioned at the Ile translational initiation codon of
the Sp3 mRNA (33); and 5'-ATTGCATCTATCGGCTTGATTTACCT-3', a nonsense
oligonucleotide. THP1 or HL60 cells were incubated in complete medium
with either nonsense or antisense oligonucleotide at a final
concentration of 20 µM for 48 h (fresh
oligonucleotides were added after 24 h) as described (29).
Northern blotting was performed and analyzed on a Storm PhosphorImager
(Molecular Dynamics) to determine the extent of down-regulation of
mRNAs for Sp1, Sp3, CD11d, and actin.
In Vivo Footprinting Analysis--
The genomic DNAs from HL60,
Jurkat, and IM9 cells were purified from lysed cells by treatment with
proteinase K followed by extensive phenol/chloroform extractions as
described (30). The genomic DNAs were treated either in vivo
or in vitro with dimethyl sulfate, cleaved with piperidine,
and analyzed by ligation-mediated PCR as described (25, 30). The
unidirectional linker was composed of two oligonucleotides,
5'-GCGGTGATCCCGGGTGATCTGAAT-3' and 5'-ATTCAGATCA-3'. For footprinting
the noncoding strand, the gene-specific primers corresponded to the
following regions of the CD11d promoter: primer 1, 5'-CTGGGAGAAGGAAGCCAGGTC-3' (for first strand synthesis from the
denatured DNAs), which spanned the region 171 to 151; primer 2, 5'-CAGGTTGTGGAGGGGGACAGAATGAGG-3' (amplification primer), which spanned
the region 146 to 120; and primer 3, 5'-GGTTGTGGAGGGGGACAGAATGAGGGTTTTTCC-3' (labeling primer), which
spanned the region 144 to 112. First strand synthesis was done for
30 min at 60 °C. The DNAs were denatured for 4 min at 95 °C and
amplified by PCR (18 cycles) as follows: 1 min at 95 °C, 2 min at
68 °C, and 3 min at 76 °C. An extra 5 s was added to each
extension step, and the final extension proceeded for 10 min. Two
additional cycles of PCR were carried out to label the PCR products as
follows: 1 min at 95 °C, 2 min at 69 °C, and 10 min at 76 °C.
The samples were loaded on a sequencing gel, and the band intensities
were analyzed on a Storm PhosphorImager.
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RESULTS |
Structural Analysis of the 5'-Flanking Region of the Human CD11d
Gene--
The identification of CD11d, a novel leukocyte integrin
-subunit on myelomonocytic cells, prompted us to begin an analysis of the transcriptional regulation of the CD11d gene. We used
to our advantage a recent report that showed, using PCR, that
CD11d is positioned no more than 11.5 kb downstream of
CD11c (27), and we rescreened a collection of
CD11c-positive cosmid clones for the presence of
CD11d. One clone was completely sequenced, and it contains
exons 15-30 of CD11c and exons 1-7 of CD11d.
The genes are arranged in the same orientation, with the translational stop codon of CD11c positioned 11,461 bp upstream of the
translational start codon of CD11d (Fig.
1). The sequences of the 1.2-kb
5'-flanking region and exons 1-7 are shown (Fig.
2).

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Fig. 1.
CD11d restriction map and location
of exons. The location of the translational stop codon
(TGA) for CD11c and the translational start codon
(ATG) for CD11d is shown. The direction of
transcription of CD11c and CD11d is indicated
with arrows. CD11d exons 1-7 are depicted as thick
vertical lines below the location of restriction enzyme
sites for EcoRI (E), HindIII
(H), XbaI (X), SacI
(S), and BamHI (B). The reference
point for the scale in bp is the CD11d trancriptional start
site, assigned as +1.
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Fig. 2.
DNA sequence of the CD11d
5'-flanking region and exons 1-7. The genomic clone
containing the CD11c and CD11d genes was
completely sequenced. The DNA sequence of the 5'-flanking region and
exons 1-7 is shown. The complete sequence in lowercase type
for introns 1, 3, and 4 and the sequence at the intron-exon junctions
for introns 2, 5, 6, and 7 and their size are shown. Consensus gt/ag
splice junctions are underlined. Putative binding sites for
transcription factors are underlined and indicated
above the sequence. The transcriptional start site (+1), the
ATG translational start site (boxed), and protein sequence
are shown.
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Determination of the Transcriptional Start Site of the CD11d
Gene--
Poly(A+) RNA and total RNA from myelomonocytic
HL60 cells was subjected to primer extension analysis with primers N379
(antisense primer with 5'-end positioned 20 nucleotides downstream of
the ATG start site) and N470 (antisense primer with 5'-end positioned immediately upstream of the ATG start site), respectively. The longest
extension product obtained with N379 was 101 nucleotides long (Fig.
3A), positioning the
transcriptional start site 78 nucleotides upstream of the ATG site. Two
extension products, 92 and 93 nucleotides long, were observed with N470
total RNA and would position the transcriptional start site(s) 14 and
15 bp further upstream (Fig. 3A). No extension products were
detected when yeast total RNA was analyzed (Fig. 3A).

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Fig. 3.
Determination of the transcriptional start
site. A, primer extension analysis was performed with
primer N379 hybridized to either HL60 poly(A+) RNA
(lane 1) or yeast total RNA (lane 2), and primer
N470 hybridized to either HL60 total RNA (lane 3) or yeast
total RNA (lane 4). The sizes in nt of extension products
are shown next to a sequence ladder generated with primer N470.
B, S1 nuclease analysis was performed with two
single-stranded DNA probes labeled with [ -32P]ATP. In
the left panel, a 247-nt DNA probe was hybridized
with either THP1 poly(A+) RNA (lane 1) or total
yeast RNA (lane 2). In the right
panel, a 99-nt DNA probe was hybridized to either HL60
poly(A+) RNA (lane 1) or total yeast RNA
(lane 2). The sizes of protected fragments are shown next to
a sequence ladder generated with N470. C, an RNase
protection assay was performed with a 562-nt RNA probe labeled with
[ -32P]UTP and hybridized to either THP1 total RNA
(lanes 1-3) or total yeast RNA (lanes 4 and
5). The ratio in units of RNase A/T1 used was 2.5 units/100
units (lanes 1 and 4), 0.25 units/10 units
(lanes 2 and 5), and 0.025 units/1 units
(lane 3). The sizes of protected fragments are shown next to
a sequence ladder generated with N470. D, a schematic
diagram summarizing the results of the transcriptional assays.
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An S1 nuclease protection assay was performed with a 247-nucleotide
single-stranded DNA probe that was generated by extension of the
[ -32P]ATP-labeled N470 primer on a double-stranded DNA
template with exonuclease-free Klenow polymerase. Hybridization of the
probe with myelomonocytic THP1 poly(A+) RNA and subsequent
S1 nuclease digestion produced four major protected fragments 75-79
nucleotides long and with varying intensities (Fig. 3B).
These results would therefore position the start of transcription
75-79 bp upstream of the ATG codon. No protected fragments were
produced when the probe was hybridized to yeast total RNA (Fig.
3B). A second antisense DNA probe, 99 nucleotides long with
the 5'-end positioned 19 nucleotides upstream of the ATG codon, was
chemically synthesized, end-labeled with [ -32P]ATP,
and hybridized with HL60 poly(A+) RNA (Fig. 3B).
S1 nuclease digestion produced four major protected fragments 49-52
nucleotides long, and the most intense fragment was 51 nucleotides long
(Fig. 3B). This second S1 analysis would therefore position
the start of transcription 69 bp upstream of the ATG codon. No
protected fragments were produced when the probe was hybridized to
yeast total RNA.
An RNase protection assay was performed with a 562-nucleotide-long RNA
probe prepared by in vitro transcription and uniformly labeled with [ -32P]UTP. The probe included the 455 nucleotides immediately upstream from the ATG codon. Hybridization of
the RNA probe with total RNA from HL60 cells and subsequent digestion
with RNase A/T1 produced four protected fragments 71-74 nucleotides
long (Fig. 3C). The length of the two most intense fragments
would position the transcriptional start site 72 or 74 bp upstream from
the ATG codon. No protected fragments were produced when the probe was
hybridized to yeast total RNA.
Taken together, these results position two transcriptional start sites
69-79 bp and 91-92 bp upstream from the ATG codon. RNase protection
assays, which provide for the most stringent hybridization and
digestion conditions and which were repeated five times, consistently
confined transcription to within 71-74 bp upstream of the ATG codon.
No TATA box is present, and transcription is most probably determined
by an initiator (Inr) control element (35) that is found in the
CD11a (36) and CD11c genes (37, 38). Since the
69-79-bp region shows homology to the classical Inr and the largest
RNase-protected fragment is 74 nucleotides long, we have assigned the
thymidine 74 bp upstream from the ATG codon as the major site (+1) of
CD11d transcription.
Functional Analysis of the CD11d Promoter--
CD11d is expressed
predominantly on myelomonocytic cells, and exposure to phorbol ester
led to its down-regulation from the cell surface (7). Since
cis-elements for basal and cell-specific activity for the
other three CD11 -subunit genes lie within 500 bp
upstream of the ATG codon (18, 21, 22, 24, 25, 29, 36, 37, 39), we
initially focused on the 946 to +74 region of CD11d. THP1
cells were transfected with construct
CD11d( 946/+74)-luc, which contains the 946 to
+74 region of CD11d fused to the luciferase gene, and
24 h post-transfection, cells were exposed to PMA for varying
times (Fig. 4). Transfected THP1 cells
exposed to PMA for up to 10 h showed no decrease in luciferase
expression; however, after 24 h, luciferase activity decreased
55% (Fig. 4). For comparison, expression from the CD11a
promoter, which is active in all leukocytes, and CD11c
promoter, which is predominantly active in myelomonocytic cells, was
monitored following transfection of the CD11a-luc and CD11c-luc constructs, respectively. In the presence of PMA,
luciferase activity from CD11a-luc in THP1 cells was
increased 4.5-fold over that obtained with the promoterless plasmid
pGL3-Basic, and luciferase activity from CD11c-luc was
increased 8.3-fold (Fig. 4). These results show that chronic rather
than acute exposure to PMA leads to down-regulation of CD11d
expression (and up-regulation of CD11a and CD11c
expression as expected) and that one or more cis-elements within the 946 to +74 region mediates this effect.

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Fig. 4.
PMA down-regulates the CD11d
promoter. CD11d( 946/+74)-luc was
transfected into THP1 cells, and 24 later, transfected cells were
exposed to PMA for 1-24 h. CD11d promoter activity in
PMA-stimulated cells is expressed relative to that in unstimulated
cells after correction for differences in transfection efficiencies.
THP1 cells were also transfected with CD11a-luc and
CD11c-luc as controls. The transfections were done in
duplicate and averaged.
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The 946 to +74 region was further examined to localize the
cis-element(s) responsible for PMA-induced down-regulation
of CD11d and/or other elements that influence either basal
or cell-specific expression. A series of CD11d reporter
constructs containing progressively larger 5'-deletions was prepared
and transfected into various cell lines. For comparison, expression
from the CD11c promoter was monitored following transfection
of CD11c-luc. Luciferase expression from the constructs
transfected into THP1 cells varied, but not significantly.
CD11d( 173/+74)-luc, which contains only the
173 to +74 region of CD11d, retained all of the activity obtained with CD11d( 946/+74)-luc and was
43-fold higher than that obtained with pGL-3-Basic (Fig.
5A). The 173 to +74 region is sufficient to confer leukocyte-specific activation of the
CD11d promoter, since luciferase activity from
CD11d( 173/+74)-luc transfected into IM9 and
Jurkat cells was increased 24- and 30-fold, respectively (Fig. 5,
B and C). In contrast, luciferase expression from
CD11d( 173/+74)-luc in MCF-7 breast cancer cells
was increased only 6.4-fold (Fig. 5D).

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Fig. 5.
Down-regulation of the CD11d
promoter by PMA is cell-specific. Various cell lines were
transfected with a series of 5'-deletion constructs of
CD11d( 946/+74)-luc and exposed to PMA for
24 h (MCF-7 cells were not exposed to PMA). The extent of
CD11d 5'-flanking sequence in each construct is indicated.
Promoter activity of each construct is expressed as -fold increase in
activity above the background activity conferred by the promoterless
control plasmid pGL3-Basic after correction for differences in
transfection efficiencies. Expression of CD11c-luc is shown
for comparison. The mean luciferase activities ± S.D. are
indicated.
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Luciferase expression from the CD11d-luc 5'-deletion
constructs transfected into THP1 cells was reduced to approximately the same extent (78-94%) after exposure to PMA (Fig. 5A). A
similar response to PMA was confirmed in another myelomonocytic cell
line, HL60 (data not shown). This shows that a PMA-responsive
cis-element(s) lies within the 173 to +74 region, since
CD11d( 173/+74)-luc, which contains only this
region, responds to PMA. In contrast, luciferase expression in IM9 and
Jurkat cells transfected with CD11d( 173/+74)-luc was not reduced by PMA but
instead was increased 2.9- and 1.7-fold, respectively (Fig. 5,
B and C). As expected, expression of the
CD11c promoter was restricted to PMA-stimulated myelomonocytic cells (Fig. 5). These results show that the 173 to +74
region regulates cell-specific down-regulation of CD11d by
PMA .
Sp1 and Sp3 Bind to the 63 to 40 Region in the CD11d
Promoter--
DNase I footprint analysis was performed to determine
whether DNA binding proteins interact with the 173 to +74 region.
When nuclear extracts prepared from unstimulated and PMA-stimulated THP1 cells were added to a probe labeled on the coding strand, strong
protection of the 63 to 40 region was revealed (Fig. 6A). This same region was also
protected by nuclear extracts prepared from unstimulated and
PMA-stimulated Jurkat and IM9 cells (Fig. 6A). When a probe
labeled on the noncoding strand was used, strong protection of an
overlapping region, 72 to 45, was detected with unstimulated and
PMA-stimulated nuclear extracts from all three cell lines (Fig.
6B). DNA sequence analysis of the overlapping region
revealed the presence of an Sp1 binding site. In vitro DNase
I footprint analysis showed that purified Sp1 protein could also
protect the 63 to 40 region (Fig.
7).

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Fig. 6.
DNase I footprint analysis of the 173 to
+74 region with crude extract proteins. Nuclear extract protein
from unstimulated ( ) or PMA-stimulated (+) cells was incubated with a
double-stranded DNA probe to the 173 to +74 region that was labeled
with [ -32P]ATP on either the coding (A) or
noncoding (B) strand. DNase I was titrated for optimal
digestion: 0.8 units of DNase I (odd-numbered lanes) or 2 units of DNase I (even-numbered lanes). Control lanes
1 and 2 contained probe only that was digested with 0.2 units and 0.4 units of DNase I, respectively. Probes not incubated with
DNase I are also shown (Un). C, thick
lines above and below the sequence summarize
the regions protected on the coding and noncoding strands,
respectively.
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Fig. 7.
DNase I footprint analysis with purified Sp1
protein. A DNA probe to the 173 to +74 region labeled with
[ -32P]ATP on the coding strand was incubated with 1 or
3 footprinting units (fpu) of purified Sp1 or c-Jun protein
as indicated. DNase I was titrated for optimal digestion: 0.2 units of
DNase I (odd-numbered lanes) or 0.4 units of DNase I
(even-numbered lanes). The absence ( ) or presence (+) of
the nonspecific competitor poly(dI-dC) is indicated.
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To confirm that Sp1 can bind within the 63 to 40 region and
determine whether other Sp1-related proteins also may bind, EMSA was
performed with nuclear extract protein from unstimulated and
PMA-stimulated THP1, IM9, and Jurkat cells. Three DNA-protein complexes
were seen when nuclear extract protein from each cell line was added to
an oligonucleotide probe that spans the 81 to 31 region (Fig.
8). DNA-protein complex 1 formed from all nuclear extracts could be supershifted with an antibody to Sp1, indicating that Sp1 was bound in this complex. Formation of DNA-protein complex 3 was inhibited (rather than supershifted) when an antibody to
Sp3 was included in the EMSA. Inhibition of complex 3 formation was
seen when nuclear extracts from the three cell lines were analyzed.
These results indicate that Sp1 and Sp3 are not co-bound on the same
DNA molecule, since anti-Sp3 antibody did not affect the formation of
the Sp1-specific complexes and anti-Sp1 antibody did not supershift the
Sp3-specific complexes. These results suggest that Sp1 and Sp3 compete
for binding to the same or overlapping sites in the CD11d
promoter. Neither PMA-dependent nor cell-specific formation
of these complexes was seen. The identity of the protein bound in
complex 2 has not been determined. Further, antibodies specific to
other Sp1-related proteins including Sp2 and Sp4 (33), Egr 1 (40), and
Egr 2 (41) did not alter the patterns of DNA-protein complexes (data
not shown).

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Fig. 8.
EMSA of Sp protein binding to the
CD11d promoter. EMSA was performed with a labeled
oligonucleotide probe spanning the 81 to 31 region of the
CD11d promoter. The probe was incubated with nuclear extract
protein from unstimulated ( ) or PMA-stimulated (+) THP1, IM9, or
Jurkat cells. The filled arrowheads indicate the three
protein-probe complexes formed in the absence (none) of
specific antibody. The specific antibody (Ab) included in
the incubation mix is indicated. The unfilled arrow
indicates the supershifted complex formed resulting from binding of
anti-Sp1 antibody to complex 1 in all extracts assayed. Anti-Sp3
antibody inhibited the formation of complex 3 in all extracts assayed.
One lane contains only the probe (probe).
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The Sp1/Sp3-binding Region Is Essential for CD11d Promoter
Activity--
To determine whether the Sp1/Sp3-binding site is
important for CD11d expression, this site was deleted from
CD11d( 173/+74)-luc, and its effect on
expression was monitored in transfected cells. Deletion of the 63 to
40 region in CD11d( 173/+74)( 63/ 40)-luc resulted in a 76% reduction of luciferase expression in THP1 cells (Fig. 9A). When transfected
THP1 cells were exposed to PMA, expression from
CD11d( 173/+74)-luc was reduced 70%, similar to
previous observations. Deletion of the 63 to 40 region further
reduced luciferase expression from
CD11d( 173/+74)( 63/ 40)-luc in
PMA-stimulated THP1 cells only an additional 7% (Fig. 9A).
Luciferase expression from
CD11d( 173/+74)( 63/ 40)-luc in transfected
IM9 and Jurkat cells was reduced 80 and 76%, respectively (Fig. 9,
B and C). Although PMA did not reduce the
expression of luciferase from CD11d( 173/+74)-luc transfected into IM9 and
Jurkat cells, expression from
CD11d( 173/+74)( 63/ 40)-luc was reduced 82 and 80%, respectively (Fig. 9, B and C). These
results show that the 63 to 40 region is essential for
CD11d promoter activity in both myelomonocytic and
nonmyelomonocytic cells. Further, the inability of PMA to reduce
luciferase expression from CD11d( 173/+74)-luc
in nonmyelomonocytic cells is dependent on the integrity of this
region.

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Fig. 9.
The Sp1-binding site is essential for
CD11d promoter activity. A deletion of the
Sp1-binding site ( 63/ 40) was introduced
into CD11d( 173/+74)-luc, and both wild-type and
deletion constructs were transfected into various cell lines.
Luciferase expression from CD11d( 173/+74)-luc
in all unstimulated cell lines is set at 100%. Differences in
transfection efficiencies were corrected. The mean luciferase
activities ± S.D. are indicated.
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The Response of the CD11d Promoter to Sp1 and Sp3 Is
Cell-specific--
To determine whether Sp1 and Sp3 functionally
interact with the CD11d promoter, Drosophila
cells, which are deficient in Sp-related proteins, were cotransfected
with expression constructs for Sp1 and Sp3 (pPacSp1 and pPacSp3) along
with CD11d( 591/+74)-luc (Fig. 10). The role of another member of the
Sp family, Sp2, expressed from pPacSp2, was similarly analyzed.
Sp1-dependent luciferase activity from the CD11d
promoter was shown to increase 4.1-fold in Drosophila cells
cotransfected with pPacSp1 and
CD11d( 591/+74)-luc (Fig. 10A). In
contrast, no induction of luciferase activity was seen when either
pPacSp2 or pPacSp3 was cotransfected. Analysis of
CD11d( 378/+74)-luc and
CD11d( 173/+74)-luc in cotransfection experiments yielded similar results (data not shown).

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Fig. 10.
Induction of the CD11d
promoter with Sp1 and Sp3. Drosophila cells
(A) were cotransfected with
CD11d( 591/+74)-luc and 5 µg each of the Sp1,
Sp2, or Sp3 expression plasmids pPacSp1, pPacSp2, or pPacSp3,
respectively. THP1 cells (B), IM9 cells (C), or
Jurkat cells (D) were cotransfected with
CD11d( 591/+74)-luc and 5 µg each of the Sp1,
Sp2, or Sp3 mammalian expression plasmids pCMV4-Sp1/flu, pCMV4-Sp2/flu,
or pCMV4-Sp3/flu, respectively. Fold Increase represents the
increase in luciferase expression relative to that obtained following
cotransfection with the Drosophila control plasmid pPacO
(0) or the mammalian control plasmid (0), which
do not express Sp proteins. PMA was added for 24 h to the
mammalian cell transfections. The mean luciferase activities ± S.D. are indicated.
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It is known that Sp1 and Sp3 compete for the same sites on the
CD11c promoter (29); however, luciferase activity from
CD11d( 591/+74)-luc is maximal in the presence
of pPacSp1 alone and was not further increased when both pPacSp1 and
pPacSp3 were present (Fig. 10A). Since
pPacSp1-dependent expression of luciferase from
CD11d( 591/+74)-luc is also not decreased in the
presence of pPacSp3, Sp3 does not compete with Sp1 for binding to the
same site. This suggests that Sp3 does not function as a repressor of
CD11d promoter activity, in contrast to its reported
repressor-like activity on other promoters (42, 43). An alternative
hypothesis is that the response of the CD11d promoter to
these Sp proteins is cell-specific and that the activity of the
CD11d promoter in Drosophila cells may not accurately reflect the actions of Sp proteins on this promoter in
myelomonocytic cells.
To address the latter hypothesis, THP1 cells were cotransfected with
mammalian expression constructs for Sp1, Sp2, and Sp3 (pCMV4-Sp1/flu,
pCMV4-Sp2/flu, and pCMV4-Sp3/flu) along with
CD11d( 591/+74)-luc (Fig. 10B).
Sp1-dependent luciferase activity from the CD11d
promoter increased 2.2-fold in unstimulated THP1 cells cotransfected
with pCMV4-Sp1/flu and CD11d( 591/+74)-luc. In
contrast to the results seen in transfected Drosophila
cells, Sp3 could also activate the CD11d promoter.
Luciferase activity increased 2.6-fold in unstimulated THP1 cells
cotransfected with pCMV4-Sp3/flu and
CD11d( 591/+74)-luc. Overexpression of Sp2,
however, had no effect. Cotransfection of both pCMV4-Sp1/flu and
pCMV4-Sp3/flu along with CD11d( 591/+74)-luc did
not increase luciferase activity above that obtained when either
expression construct was transfected separately. This indicates that
Sp1 and Sp3 compete for the same site as suggested in the above EMSA of
these factors.
To determine whether Sp1 and Sp3 regulate the CD11d promoter
in other cell types, the same cotransfection experiments were performed
in IM9 and Jurkat cells. Sp1-dependent luciferase activity of the CD11d promoter increased 1.8-fold in unstimulated IM9
cells (Fig. 10C); however, no response of this promoter to
Sp1 was observed in unstimulated Jurkat cells (Fig. 10D).
Overexpression of Sp2 in either cell line had no effect. In contrast to
that observed in transfected THP1 cells, Sp3 exhibited repressor
activity in IM9 and Jurkat cells. Luciferase activity decreased 40% in
IM9 cells and 56% in Jurkat cells cotransfected with pCMV4-Sp3/flu and
CD11d( 591/+74)-luc (Fig. 10, C and
D). Overexpression of Sp3 attenuated the activation of the
CD11d promoter by Sp1 in IM9 cells cotransfected with both
pCMV4-Sp1/flu and pCMV4-Sp3/flu. Analysis of
CD11d( 173/+74)-luc in cotransfection
experiments yielded similar responses to Sp1, Sp2, and Sp3 in these
cell lines (data not shown).
To determine whether the PMA-induced down-regulation of the
CD11d promoter is affected by the level of Sp1 or Sp3 in
THP1 cells, cotransfection experiments were performed in PMA-stimulated cells. In the absence of pCMV4-Sp1/flu, luciferase activity from CD11d( 591/+74)-luc was significantly reduced in
PMA-stimulated cells. Cotransfection of pCMV4-Sp1/flu along with
CD11d( 591/+74)-luc increased luciferase
activity 3.28-fold, completely reversing the response of THP1 cells to
PMA (Fig. 10B). Similarly, cotransfection of pCMV4-Sp3/flu
along with CD11d( 591/+74)-luc increased
luciferase activity 3.62-fold in PMA-stimulated THP1 cells (Fig.
10B). In the presence of both pCMV4-Sp1/flu and
pCMV4-Sp3/flu, no further increase in CD11d promoter
activity was observed over that obtained when each expression construct
was transfected separately. No response to pCMV4-Sp2/flu was seen. In
all experiments, overexpression of either Sp1 or Sp3 in PMA-stimulated
THP1 cells did not significantly increase the absolute level of
luciferase activity over that obtained in unstimulated cells that were
not transfected with either factor. In PMA-stimulated IM9 cells, Sp1
further increased luciferase activity over that obtained in
unstimulated cells overexpressing this factor, and Sp3 continued to
exhibit repressor activity (Fig. 10C). In PMA-stimulated
Jurkat cells, no differences were found in the responses to Sp1 and Sp3
when compared with those observed in unstimulated cells (Fig.
10D).
To confirm whether Sp1 and Sp3 regulate the CD11d promoter
in myelomonocytic cells, antisense oligonucleotides to the 5' portion of the coding regions for these factors were added to unstimulated THP1
and HL60 cells for 48 h to down-regulate their expression (Fig.
11). Northern blot analysis showed that
the level of Sp1 mRNA in Sp1-antisense treated THP1 cells was
reduced 85% when compared with the level of Sp1 mRNA in
nonsense-treated cells. Further, the level of Sp3 mRNA was
unaffected by the Sp1-antisense oligonucleotide. The level of
CD11d mRNA was reduced 71% following treatment of THP1
cells with Sp1-antisense oligonucleotides. Treatment of THP1 cells with
Sp3-antisense oligonucleotide resulted in an 88% reduction of Sp3
mRNA but did not affect the level of Sp1 mRNA. The level of
CD11d mRNA was reduced 74% following treatment of THP1
cells with Sp3-antisense oligonucleotides. Essentially identical
results were obtained when another myelomonocytic cell line, HL60, was
analyzed. Treatment of HL60 cells with Sp1-antisense oligonucleotides
resulted in a 91% reduction of Sp1 mRNA and a 62% reduction of
CD11d mRNA. Similarly, treatment of HL60 cells with
Sp3-antisense oligonucleotides resulted in a 93% reduction of Sp3
mRNA and a 74% reduction of CD11d mRNA. Together
with the Sp1 and Sp3 overexpression experiments, these results indicate that Sp1 and Sp3 are equally effective in activating the
CD11d promoter in myelomonocytic cells and are most probably
the Sp-type proteins that occupy this promoter in vivo.

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Fig. 11.
Down-regulation of CD11d
mRNA with Sp1-antisense and Sp3-antisense
oligonucleotides. THP1 and HL60 cells were incubated for 48 h
with a combination of two Sp1-antisense (anti-Sp1)
oligonucleotides (see "Experimental Procedures"), an Sp3-antisense
(anti-Sp3) oligonucleotide, or a nonsense oligonucleotide.
Total RNA was then isolated and hybridized with Sp1, Sp3, actin, and
CD11d gene probes. The corresponding RNA gel is shown.
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Myelomonocyte-specific Down-regulation of CD11d by PMA Is
Associated with Loss of Sp Protein Binding in Vivo--
The above
results show that cell-specific down-regulation of CD11d
promoter activity is mediated through one or more cis
elements within the 173 to +74 region. The inability of IM9 and
Jurkat cells to maintain CD11d expression in the presence of
PMA when the Sp-binding site was deleted indicated that an Sp protein
was a necessary factor involved in this response. The possibility that
loss of Sp binding was linked to down-regulation of CD11d promoter activity in THP1 cells exposed to PMA was suggested when the
reduction in luciferase activity from
CD11d( 173/+74)-luc in transfected THP1 cells
exposed to PMA was found to be about the same as that obtained in
unstimulated THP1 cells transfected with the Sp-deleted construct
CD11d( 173/+74)( 63/ 40)-luc (70 versus 76% reduction, respectively; Fig. 9). Further, the
PMA-induced down-regulation of CD11d promoter activity was
reversed when either Sp1 or Sp3 was overexpressed (Fig.
10B). Previously, we (25) and others (24) have shown that
cell-specific up-regulation of CD11c and CD11b by
PMA is attributed to increased binding of Sp proteins in myeloid cells,
which raised the possibility that selective Sp protein binding also
occurs on the CD11d promoter. To explore this possibility
further, in vivo genomic footprinting was performed. Genomic
DNA, methylated in vivo with dimethyl sulfate, was isolated
from HL60, IM9, and Jurkat cells that were either unstimulated or
PMA-stimulated. DNA was also isolated from HL60 and Jurkat cells,
stripped of bound protein, and methylated in vitro as
controls. Analysis of the CD11d noncoding strand (Fig. 12) revealed hyposensitive sites in
unstimulated HL60 DNA at positions 38, 40, 42, 43, 50, 52,
55, 56, 58 to 61, 63, 65, and 66, which correspond to
guanine nucleotides in the Sp-binding site. No protection was seen over
these positions on genomic DNA from PMA-stimulated HL60 cells (Fig.
12). In contrast, genomic DNAs from IM9 and Jurkat cells, either
unstimulated or PMA-stimulated, were similarly protected over these
positions (Fig. 12). From these results, we conclude that occupation of
the CD11d promoter by an Sp protein, presumably Sp1 or Sp3,
is significantly reduced in PMA-stimulated myelomonocytic cells and
that myelomonocytic-specific down-regulation of CD11d
expression is mediated through preferential loss of Sp protein binding
following PMA stimulation.

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Fig. 12.
Loss of Sp protein binding in
vivo in PMA-stimulated myelomonocytic cells.
Protein-bound genomic DNA was methylated in vivo and
isolated from unstimulated ( ) and PMA-stimulated (+) HL60, IM9, and
Jurkat cells. As controls, naked DNA (nak) was isolated from
unstimulated HL60 and Jurkat cells and methylated in vitro.
All DNAs were subjected to ligation-mediated PCR, and the reaction
products were loaded onto a 5% polyacrylamide/urea gel. Analysis of
the band intensities on a Storm PhosphorImager was done to correct for
loading differences, and very hyposensitive (open circles)
and partly hyposensitive (gray circles) sites of methylation
are indicated. Two independent preparations of HL60 DNA (unstimulated
and PMA-stimulated) are shown. The schematic diagram summarizes the
results, and open and gray circles
below the sequence refer to the guanidine residues on the
noncoding strand.
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DISCUSSION |
In this study, we have isolated a genomic clone for
CD11d that contains the intergenic region between
CD11c and CD11d and the 5'-coding portion of
CD11d, and we have begun to analyze the regulatory
mechanisms for CD11d expression. DNA sequence analysis of
this clone showed that the ATG translational codon for CD11d lies 11,461 bp downstream of the translational stop codon for CD11c and that both genes are transcribed in the same
direction. This finding confirms a previous brief report that
CD11d lies no more than 11.5 kb downstream of
CD11c (27). In that report, an 11.5-kb DNA fragment was
amplified from genomic DNA using specific oligonucleotide primers to
the 3'-end of CD11c and the 5'-end of CD11d.
Others (26) have reported the isolation of a partial genomic clone
containing the 3'-end of CD11d. DNA sequence analysis of
that clone revealed 12 exons that are homologous to exons 14-17, 21, and 24-30 of the CD11c gene, and it was predicted that five additional exons homologous to exons 18-20, 22, and 23 of
CD11c are probably also present. A comparison of the DNA
sequence of exons 9-13 of CD11c reveals considerable
homology beginning with nucleotide 982 in the 3486-nucleotide coding
sequence of CD11d, and it is likely that these four exons
are also present in the CD11d genomic sequence. The
CD11d genomic clone in our study also contains exons 1-7
not previously reported, which correspond to nucleotides 1-704 of the
CD11d coding sequence. Exon 8 and possibly another exon is
predicted to lie between nucleotides 704 and 982 of CD11d,
which would be consistent with an average exon size of 100-150 nucleotides.
The major transcriptional start sites for the CD11a,
CD11b, and CD11c genes are located 93, 92, and 67 bp, respectively, upstream of the ATG translational start sites (18,
36-38), and several minor transcriptional start sites are clustered
within a 30-50-bp region surrounding these sites. We have determined,
using RNase protection analysis, S1 nuclease analysis, and primer
extension analysis, that transcription of CD11d begins
within the region 69-79 bp upstream of the ATG codon. A second
transcriptional start site was also revealed 92-93 bp upstream ATG,
but only with primer extension analysis. The 69-79-bp region is
homologous to the classical initiator, or Inr, that directs
transcription in TATA-less promoters including the other
CD11 genes. The thymidine at 74 bp upstream from the ATG was
assigned as the transcriptional start site, since this corresponded to
the longest RNase-protected fragment observed using the most stringent
of hybridization conditions.
The 946 to +74 region of CD11d was chosen for analysis in
this study because cis-elements for the other
CD11 genes are located within 500 bp upstream of their ATG
codons. This region, when fused to luc, promoted high level
expression of luciferase in THP1 and HL60 (myelomonocytic cells) but
not in MCF-7 (breast adenocarcinoma cells), which demonstrates
leukocyte-specific expression of this promoter. Progressive deletion
beginning at the 5'-end of the 946 to +74 region had no significant
effect on expression of the CD11d promoter in either
myelomonocytic cell line, THP1 or HL60. In contrast, deletion of the
591 to 378 region led to significant increases in CD11d
promoter activity in the B-cell line, IM9, and the T-cell line,
Jurkat.2 This result suggests
that a cell-specific silencer element lies within this region, and we
are currently investigating this possibility. Although luciferase
expression from constructs containing the 591 to 378 region was
significantly less in B-cells and T-cells than in myelomonocytic cells,
it was still rather high as compared with expression in the
nonleukocyte cell line, MCF-7. It is, therefore, very likely that other
cell-specific cis-elements lie upstream of 946. Support
for this concept is evidenced in transgenic analysis of the leukocyte
integrin genes. Although cell-specific expression in transfected cell
lines of reporter genes fused to around 500 bp of 5'-flanking sequence
from the other three CD11 genes has been demonstrated,
efficient cell-specific expression of CD11 transgenes in
mice has not. For example, the 1.7-kb 5'-flanking region of
CD11a (44) and the 1.5-kb 5'-flanking region of
CD11b (45) were not sufficient to promote high level
expression of reporter genes that paralleled those of the endogenous
CD11 genes. Such studies show that additional sequences
regulate correct leukocyte integrin transgene expression and that
transient transfection assays may not reveal such regions. We are now
searching the far upstream region of CD11d for cell-specific elements.
In this study, we have shown that CD11d promoter activity
decreased following exposure of myelomonocytic cells to PMA, which most
probably accounts for the decrease in CD11d surface
expression shown in a previous study (7). Acute exposure to PMA
activates and then down-regulates specific protein kinase C isoforms,
whereas chronic exposure can lead to differentiation of the cell.
Decreased CD11d promoter activity following chronic but not
acute exposure to PMA is consistent with a mechanism that involves
differentiation of myelomonocytic cells. That CD11d
expression is confined to subsets of myelomonocytic cells in
situ including macrophage foam cells and splenic red pulp
macrophages may be a result of the differentiation of macrophage
precursors and subsequent down-regulation of CD11d in the
majority of mature macrophages. Although acute exposure to PMA did not
affect CD11d promoter activity, it remains to be seen
whether altered protein kinase C isoform expression as a result of
differentiation directly down-regulates CD11d promoter function.
Down-regulation of CD11d promoter activity by PMA was shown
to be cell-specific and is mediated by one or more
cis-elements within the 173 to +74 region. Within this
region is a binding site for Sp1 and Sp3, and deletion of this site led
to decreased CD11d promoter activity in both unstimulated
myelomonocytic and nonmyelomonocytic cells. This indicated that the
activity of one or both of these Sp proteins at this site mediates
basal CD11d promoter activity that is not cell-specific. The
role of Sp1 as an activator of the CD11d promoter that is
not cell-specific was evidenced by the ability of this factor to
activate the CD11d promoter in THP1 and IM9 cells. The lack
of response to Sp1 overexpression in Jurkat cells suggests that either
a different Sp protein functions in this cell type or, more likely,
that the high endogenous level of Sp1 in Jurkat cells obscures or
limits the response to additional Sp1. Further analysis, however,
showed that the response of the CD11d promoter to Sp3 is
cell-specific. The Sp3-dependent activation of the
CD11d promoter in myelomonocytic cells contrasts with the inability of Sp3 to activate this promoter in transfected
Drosophila cells and its repressor role on CD11d
expression in mammalian cells. Sp3 has been shown to contain both
activator and repressor functions, and several studies suggest that the
ability of Sp3 to attenuate Sp1-dependent activation is
promoter-specific (46). Additionally, its ability to repress or
activate gene expression is dependent on cell type (47). Our results
are thus consistent with what is known about Sp3 function.
That Sp1 mediates basal activity of the CD11d promoter that
is not cell-specific is also supported by in vivo genomic
footprint analysis that showed the Sp-binding site to be occupied in
unstimulated myelomonocytic and nonmyelomonocytic cells. In contrast,
PMA exposure led to decreased occupancy of this site specifically in
myelomonocytic cells. This is consistent with the concept that Sp1
and/or Sp3 mediate cell-specific responses to PMA. The mechanism for
decreased Sp protein binding in PMA-stimulated myelomonocytic cells is
not clear. Glycosylation of Sp1 has been shown (48, 49) and has been
proposed to account for enhanced transcriptional activity; however, we
have not determined whether post-translational modifications of Sp1
account for differential binding of Sp1 to CD11d. Physical interaction of Sp1 with a protein factor could also affect its ability
to bind to the CD11d promoter. Sp1 has been shown to
physically interact with a number of proteins including the erythroid
transcription factor GATA-1 (50, 51), the parvoviral nonstructural
protein NS-1 (52), and the TATA box-associated factor
dTAFII 110 (53). An activator protein may interact with Sp1
to increase Sp1 binding, and PMA exposure may lead to down-regulation
of such an activator protein specifically in myeloid cells.
An alternative scenario is that an inhibitory protein binds to Sp1
and/or Sp3 to decrease binding to the CD11d promoter. Chen et al. (54) identified a 20-kDa protein fraction referred to as Sp1-I that inhibited binding of Sp1 to the rat c-jun
promoter. Murata et al. (55) showed that two proteins, 74 and 110 kDa in size, can associate with the amino terminus of Sp1
in vitro and potentially inhibit Sp1 activity. Recent
studies suggested that a negative inhibitor may bind to Sp1 and that
the retinoblastoma protein stimulates Sp1- and Sp3-mediated
transcriptional activation of the c-fos, c-myc,
and TGF- 1 promoters (30, 31, 54) through release of this
inhibitor. Conceivably, PMA exposure may lead to binding of a
cell-specific inhibitory protein to Sp1 and/or Sp3, which, in turn,
decreases their ability to bind.
A third scenario is that the ratio of Sp1 to Sp3 differentially
controls CD11d promoter expression. Increased Sp1/Sp3 ratios were suggested to account, in part, for the increased expression of the
vascular endothelial growth factor receptor in endothelial versus nonendothelial cells (56). Although we have not
determined the relative levels of Sp1 and Sp3 in the cell types
examined in this study, an increased level of Sp3 in nonmyelomonocytic cells combined with its differential repressor activity in these cells
would attenuate Sp1-mediated basal activity of the CD11d promoter. PMA exposure may increase the Sp1/Sp3 ratio in
nonmyelomonocytic cells, leading to decreased Sp3 binding and increased
Sp1 binding. That Sp3 does not bind to the CD11d promoter to
effect PMA-mediated down-regulation in myelomonocytic cells is
evidenced in in vivo footprint analysis, which showed no
evidence of any protein bound to the Sp site following PMA stimulation
of myelomonocytic cells. EMSA performed in this study did not show
differential binding of these factors when nuclear extract protein from
unstimulated cells was compared with that from PMA-stimulated cells.
However, EMSA often fails to detect differential binding of factors and is not necessarily quantitative for detecting levels of specific factors; therefore, the results of EMSA in this study do not rule out
this last concept. In vivo footprint analysis, which more accurately reflects the binding status of promoters under more physiological conditions, is consistent with all three scenarios.
The differential binding of Sp1 and/or Sp3 to the CD11d
promoter in myeloid cells in response to PMA is analogous to that shown
in our study of the CD11c promoter (25). However, in that study it was shown that, in vivo, an Sp protein is not bound
to the CD11c promoter in unstimulated myeloid cells but is
bound in PMA-stimulated myeloid cells. The close proximity of
CD11c to CD11d might influence their expression
if both genes are controlled by common transcription factors and
competition for these factors occurs. If competition for Sp1 and/or Sp3
by these two promoters exists, then the low binding of Sp protein to
the CD11c promoter in unstimulated myelomonocytic cells
would free more Sp molecules to bind the CD11d promoter,
whereas the converse would occur in PMA-stimulated cells. What factors
might influence the binding of Sp proteins preferentially to one
promoter over the other are unknown. One scenario is that in
unstimulated myelomonocytic cells an activator protein interacts
specifically with the CD11d promoter and serves to tether
the Sp molecule to this promoter. Conversely, such an activator protein
may only be present in PMA-stimulated cells and interact specifically
with the CD11c promoter to tether Sp protein to this
promoter. Similarly, inhibitor proteins that interact specifically with
one promoter or the other may, in some manner, inhibit binding of Sp
protein to whichever promoter is bound by the inhibitor. Another
scenario, proposed by Rigaud et al. (57), is that transient
binding of a transcription factor induces chromosomal changes that
promote binding of another factor. Chen et al. (24)
suggested that PU.1 binding to the CD11b promoter induced
such chromosomal alterations that enable Sp1 to bind. In our study of
the CD11c promoter, we found that Sp1 increases binding of
c-Jun (25).
CD11d is predominantly expressed in specialized subsets of
peripheral blood leukocytes; however, its role in such cells is unknown. Of particular interest is its expression on macrophage foam
cells, where CD11d may be involved in foam cell-specific functions such as low density lipoprotein removal and secretion of
growth factors, cytokines, and superoxide radicals. An understanding of
the basic regulatory mechanisms that control CD11d
expression may extend our understanding of how macrophage foam cells
contribute to the progression and/or regression of atherosclerosis.
Identification of cis-elements within the CD11d
promoter that are important for macrophage gene expression would also
be important in the development of an optimized delivery system using
these cis-elements to target a range of molecules involved
in atherosclerosis to foam cells and test their function.
 |
ACKNOWLEDGEMENTS |
We thank Dr. R. Tjian for generously sharing
the pPacO and pPacSp1 plasmids and Dr. J. M. Horowitz for
generously providing the pCMV4-Sp1/flu, pCMV4-Sp2/flu, and
pCMV4-Sp3/flu plasmids. J. D. N. is particularly indebted to Demavand
Shama for helpful discussions.
 |
FOOTNOTES |
*
This work was supported by American Heart Association Grant
N00014-95-1-1278 (to J. D. N.).The costs of publication of this article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) AF187881.
To whom corresponding should be addressed: One Guthrie Square,
Sayre, PA 18840. Tel.: 570-882-4653; Fax: 570-882-5151; E-mail: jnoti@inet.guthrie.org.
2
J. D. Noti, A. K. Johnson, and J. D. Dillon, unpublished observations.
 |
ABBREVIATIONS |
The abbreviations used are:
PCR, polymerase
chain reaction;
kb, kilobase pair(s);
bp, base pair(s);
PMA, phorbol
12-myristate 13-acetate;
luc, firefly luciferase gene;
EMSA, electrophoretic mobility shift analysis.
 |
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