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J Biol Chem, Vol. 275, Issue 14, 9946-9956, April 7, 2000
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From the Departments of
Pharmacology and
Therapeutics,
Biochemistry, and

Oncology and the Cancer Center, McGill
University, Montréal, Québec H3G 1Y6, Canada
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ABSTRACT |
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Developing small molecule agonistic ligands for
tyrosine kinase receptors has been difficult, and it is generally
thought that such ligands require bivalency. Moreover, multisubunit
receptors are difficult to target, because each subunit contributes to
ligand affinity, and each subunit may have distinct and sometimes
opposing functions. Here, the nerve growth factor receptor subunits p75 and the tyrosine kinase TrkA were studied using artificial ligands that
bind specifically to their extracellular domain. Bivalent TrkA ligands
afford robust signals. However, genuine monomeric and monovalent TrkA
ligands afford partial agonism, activate the tyrosine kinase activity,
cause receptor internalization, and induce survival and differentiation
in cell lines and primary neurons. Monomeric and monovalent TrkA
ligands can synergize with ligands that bind the p75 subunit. However,
the p75 ligands used in this study must be bivalent, and monovalent p75
ligands have no effect. These findings will be useful in designing and
developing screens of small molecules selective for tyrosine kinase
receptors and indicate that strategies for designing agonists of
multisubunit receptors require consideration of the role of each
subunit. Last, the strategy of using anti-receptor mAbs and small
molecule hormone mimics as receptor ligands could be applied to the
study of many other heteromeric cell surface receptors.
Nerve growth factor
(NGF)1 is a dimeric hormone
composed of two identical protomers. NGF binds to either or both of two
receptors termed TrkA and p75. Cells expressing TrkA bind NGF with
intermediate affinity (Kd ~10 Agonists that activate TrkA afford protection from apoptotic cell death
and neuronal differentiation and axonal growth (9). The p75 receptor
mediates apoptosis in some neuronal and nonneuronal cells (reviewed in
Refs. 10 and 11)), but it is unclear whether p75-mediated death is
constitutive, induced by agonistic p75 ligands, or can be antagonized
by other ligands. Culture studies where Trk-specific ligands were mixed
with p75-specific ligands have shown synergy and reciprocal regulation
of function (6-8, 12).
TrkA is a tyrosine kinase receptor that transduces NGF signals. The
dimeric NGF protein induces TrkA dimerization leading to activation of
the kinase (13), as expected by analogy with other receptor tyrosine
kinases (14). However, dimeric ligands do not always lead to receptor
activation (15-17). Hence, the possibility that monomeric ligands
could induce conformational changes leading to receptor dimerization or
activation remains an attractive hypothesis (18). Since no biological
studies have been done with defined and genuine monomeric
ligands of TrkA or any other tyrosine kinase receptor, this is one aim
of the present study.
Functional synergy between bivalent Trk ligands and bivalent p75
ligands, leading to enhanced Trk activation and cell survival, have
been reported (6, 8). However, no functional studies of synergy have
been done with defined and genuine monovalent ligands of p75 and TrkA.
This is another aim of the present study.
To answer both aims, we used defined monovalent and monomeric ligands
that bind to the extracellular domain of TrkA and p75 receptors.
Specifically, we asked (i) whether monovalent and monomeric ligands of
TrkA can act as partial agonists, (ii) whether monomeric ligands of
TrkA can synergize with ligands of p75, and (iii) what the valency
requirement is for p75 ligands to synergize with TrkA ligands. Three
sets of ligands that bind the extracellular domain of NGF receptors
were available. Each ligand was used in its bivalent or monovalent
state, alone or in combinations, to probe receptor function in
biological and biochemical assays.
Anti-TrkA mAb 5C3 is an agonist ligand of TrkA (19). Anti-p75 mAb MC192
is a p75 ligand that can synergize with TrkA ligands (6). Peptides
termed C(92-96) and C(92-97) bind TrkA in vitro and target
TrkA-expressing cells in vivo (20-22). When TrkA is engaged
by these peptide analogs, binding of the natural ligand NGF is
antagonized (21), but a possible intrinsic activity of the peptide
analogs upon binding TrkA had not been studied.
Biophysical characterization of C(92-96), described herein, defines it
as a genuine monomeric and monovalent TrkA ligand. We report that
genuine monovalent TrkA ligands are partial agonists and induce TrkA
activation and internalization and cell survival and differentiation.
Expectedly, bivalent TrkA ligands afford more robust signals. These
data challenge the exclusive notion of ligand bivalency postulated for
activation of tyrosine kinase receptors. For p75, only bivalent ligands
afford signals that synergize with TrkA-mediated signals. This suggests
that TrkA and p75 differ in their requisites for ligand activation.
Last, oligomerizing ligands afford the same signals as homodimerizing ligands.
The insight that monovalent small molecule ligands can be partial
agonists will be useful for screening and designing pharmacological agents, and the approach described can be adapted to the study of other receptors.
Cell Lines
Rat PC12 cells express low levels of rat TrkA and
40,000-100,000 p75 receptors/cell (TrkA+
p75+++). B104 rat neuroblastomas express ~50,000 p75
receptors/cell but do not express Trks (TrkA Dissociated Neuronal Dorsal Root Ganglia Cultures
Fetal rat dorsal root ganglia (DRG) primary cultures were
established essentially as described (24) from Harlan Sprague-Dawley day 17 rat embryos. All ganglia were dissected and dissociated first
enzymatically with trypsin and then mechanically. Dissociated cells
were cultured (100,000 cells/well) in 96-well plates precoated with
collagen and grown for a total of 8 days in Neuro Basal Medium containing N2 supplement (Life Technologies, Inc.), antibiotics, and
L-glutamine. These DRG cultures are ~85% TrkA-expressing
and are heavily dependent on TrkA signals for survival (25, 26).
Antibody and Fragment Preparation
The activities of anti-human TrkA IgG mAb 5C3 and anti-rat p75
IgG mAb MC192 have been described (6, 19). mAbs 5C3 and MC192 do not
cross-block each other's binding. Purified IgGs were digested with
papain (Life Technologies, Inc.) to yield monovalent fragments (Fabs).
For further purification, first papain was inactivated; second, the Fc
fragments were removed in protein G-Sepharose columns (HiTrap; Amersham
Pharmacia Biotech); and third, the Fabs containing
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
10
M) (1-3), and cells expressing p75 bind NGF with lower
affinity (Kd ~10
9 M)
(4). Co-expression of TrkA and p75 creates high affinity NGF binding
sites (Kd ~10
12 M) (3),
indicative of physical and functional interactions (5-8).
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MATERIALS AND METHODS
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
p75+++). The 4-3.6 cells are B104 cells stably transfected
with human trkA cDNA and express equal surface levels of
p75 and TrkA (TrkA+++ p75+++) (23). The 6-24
cells are PC12 cells stably transfected with human trkA
cDNA and overexpressing TrkA (TrkA+++
p75+++). Cell surface expression of each of the NGF
receptors was routinely controlled in all cells by quantitative FACScan
assays (Becton Dickinson) (data not shown). These cells do not express
detectable mRNA for neurotrophins (data not shown; Ref. 23) and
undergo apoptosis when neurotrophins or serum are withdrawn.
light chains
were purified to >98% purity in KappaLock-Sepharose columns (Upstate
Biotechnology, Lake Placid, NY) and by preparative FPLC with sizing
columns (Amersham Pharmacia Biotech). No IgG was detected in Fab
preparations. FPLC spectrometry and size exclusion analysis under
native conditions did not reveal the presence of aggregates, even at 40 µM Fab concentrations (bioassays use nanomolar concentrations). The conditions used would have detected <0.2% of Fab
aggregates. Binding competition assays between 5C3 Fabs and the intact
antibody indicated that the affinity of Fabs (Kd 10 nM) is within 5-fold of the intact IgG
(Kd 2 nM). The affinities of the MC192
Fabs were not measured directly. However, FACScan assays demonstrated
that MC192 Fabs and MC192 IgG (Fig. 1, A and B)
and 5C3 Fabs and 5C3 IgG (Fig. 1, C and D) bound
their cellular targets in a specific and saturable fashion
indistinguishable from each other (Fig.
1).

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Fig. 1.
Binding profile of mAb versus
Fab fragments. 4-3.6 cells expressing equal
levels of TrkA and p75 were analyzed by FACScan binding as described
under "Materials and Methods." Binding of intact IgG was revealed
with fluorescein isothiocyanate-coupled goat anti-mouse IgG and binding
of Fabs with fluorescein isothiocyanate-coupled goat anti-mouse Fab.
Controls excluded the specific primary. Saturating concentrations are
achieved at 50 nM Fabs and at 25 nM IgG. These
concentrations have equal number of receptor-binding units because IgGs
are bivalent. Decreasing the saturating dose 5-fold results in similar
immunostaining patterns for IgG and Fabs (compare A versus B
and C versus D), suggesting similar binding properties. Note
that FACScan immunostaining conditions (105 cells
stained/test, binding primary for 30 min at 4 °C) are not identical
to the conditions used for survival assays; hence, saturating
concentrations for the latter cannot be extrapolated.
Cyclic NGF Mimics
The NGF mimic C(92-96) is an N-acetylated
(N-Ac) cyclic peptide with primary sequence
N-Ac-YCTDEKQCY. The NGF mimic C(92-97) is
N-Ac-YCTDEKQACY. The C(92-96) and C(92-97)
peptides are cyclized by intrachain disulfide bonds (indicated by the
underlines) (21). These peptides are structural mimics of the C-D
-turn of NGF (27). Linear peptides with the same
sequences do not bind TrkA and were prepared as controls by
substituting Cys with Met (primary sequence YMTDEKQMY). The linear
peptides do not cyclize, and NMR spectroscopy indicated a lack of
conformation (data not shown). The C(92-97)dimer is a
tethered covalently linked dimer of C(92-97). High pressure
liquid chromatography and mass spectroscopy analysis confirmed
the expected retention time and mass for a dimer.
Peptide Synthesis and Characterization
N-Ac peptides were synthesized by Fmoc (N-(9-fluorenyl)methoxycarbonyl) chemistry. Purification, quality control, and characterization of the peptides were done as described (21) and by NMR diffusion studies (this report). More convincingly, the full NMR spectra of N-Ac-C(92-96) were analyzed (27). Assignment of all resonances and distances and resolution of the structure showed the peptide to be monomeric. Therefore, it is extremely unlikely that N-Ac-C(92-96) is a noncovalent dimer. With respect to a possible covalent dimer, mass spectroscopy (API III MS System, Sciex, Thornhill, Ontario) by electrospray ionization quadrupole (data points every 0.1 Da) verified the chemical composition and monomeric state of N-Ac-C(92-96) with 1192.3 ± 0.3 atomic mass units measured, which is the theoretical mass (1192.2) for an oxidized monomer. No trace of a covalent peptide dimer was detected even after prolonged signal averaging, using conditions that would have detected 1% of dimer. Therefore, it is extremely unlikely that N-Ac-C(92-96) is a covalent dimer.
NMR Spectroscopy
NMR samples contained 5 mM N-Ac-C(92-96)
in distilled water at pH 5.7 containing 10% (v/v) of D2O
for the deuterium lock. When D2O was used as a solvent, the
peptide was twice lyophilized and redissolved in D2O.
Spectra were acquired at 500-MHz proton frequency on a three-channel
Bruker DRX500 spectrometer equipped with pulsed field gradients.
Standard experimental protocols were used for the acquisition of NMR
spectra and spectral assignments. Isotropic self-diffusion measurements
used NMR pulse field gradients at different peptide concentrations (28,
29). Seventeen one-dimensional assays were done at each concentration
with gradient strengths from 0.67 to 63.65 G/cm, gradient duration of
3.5 ms, and a diffusion time of 150 ms. Peptide signal decay was
measured at nine different frequencies. Data were fit to the equation
I = I°exp(
(
G)2(
/3)
), where I is the experimentally measured signal
intensity attenuated by diffusion,
is the 1H
gyromagnetic ratio,
is gradient duration, G is the
gradient strength,
is time between gradient pulses, and
is
diffusion coefficient. Results were averaged.
Ligand Concentrations and Valency
Antibodies are defined as "artificial receptor ligands"
because they are specific, they bind with high affinity, with saturable and reversible kinetics, and they are bioactive. Responses to a full
dose range (from picomolar to high micromolar) were studied previously
for some ligands, and responses for the same dose range for all ligands
were studied herein (data not shown). Usually, only optimal
concentrations of NGF mimics, mAbs, or Fabs that afford trophic signals
are shown for clarity. The NGF mimic C(92-96) is monomeric and
monovalent. It is water-soluble and does not aggregate even at 18 mM (this paper). The C(92-97)dimer is a
covalent dimer and bivalent analog of the C(92-97) NGF mimic. Intact
IgGs are dimeric and bivalent, and Fabs are monomeric and probably monovalent. Where indicated, Fabs were cross-linked with goat anti-mouse Fab antibody (
-Fab; Sigma) at a 2:1 ratio of Fab to
-Fab. This cross-linking ratio affords optimal dimerization (one
-Fab can bind two Fabs). Higher cross-linking of Fabs using
Fab/
-Fab ratios of 1:1 or 1:5 (each Fab bound by many
-Fabs),
leading to ligand oligomerization, achieved results comparable with
dimerizing ratios of 2:1 Fab/
-Fab (data not shown).
Protection from Apoptotic Death
Primary DRG Cultures-- After a total of 8 days of culture with NGF (Prince Labs, Toronto, Canada) or the indicated test or control ligands, cell survival were studied using the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) colorimetric assay and by microscopic observation.
Cell Lines-- 5,000 cells/well in protein-free medium (PFHM-II; Life Technologies, Inc.) containing 0.2% bovine serum albumin (crystalline fraction V; Sigma) were seeded in 96-well plates (Falcon, Mississauga, Canada). The cultures were untreated or were treated with the indicated test or control ligands. Cell viability was quantitated using the MTT assay after 56-72 h of culture, and apoptotic death was confirmed by analysis of DNA fragmentation patterns. Percentage of protection was standardized from MTT OD readings relative to optimal NGF (1 nM) = 100%. The OD values of untreated cells were subtracted and were <15% for cell lines and <30% for primary cultures. The higher survival of untreated primary cultures is probably due to endogenous production of limiting amounts of growth factors.
Tyrosine Phosphorylation Assays
TrkA tyrosine phosphorylation was assayed after a 15-min
treatment of intact cells with the indicated agent(s) and revealed by
Western blotting of whole cell lysates as described (6). Anti-phosphotyrosine (
-Tyr(P)) mAb 4G10 (Upstate Biotechnology, Inc., Lake Placid, NY) or antiserum
-Tyr(P)490 against the
Tyr(P)490 of TrkA (within the Shc docking site) (30) was
used as a primary antibody. Bands in x-ray films were quantified by
densitometry, and intensities were standardized relative to 1 nM NGF. Densitometry of four to five independent gels was
analyzed statistically by paired Student's t tests with
Bonferroni corrections.
TrkA Internalization Measurements
Live 4-3.6 cells were treated as indicated for 45 min at 4 °C in the presence or absence of 0.25% sodium azide. Cells were maintained at 4 °C or shifted to 37 °C for another 20 min to allow ligand-induced receptor internalization (9). Then, cells were washed and immunostained with mAb 5C3 at 4 °C (phosphate-buffered saline, 0.5% bovine serum albumin, 0.1% sodium azide), for analysis of surface TrkA expression by FACScan immunofluorescence as described (9). In each assay, 5,000 cells were acquired, and the mean channel fluorescence of bell-shaped histograms was analyzed (LYSIS II, Becton Dickinson, CA). Percentage inhibition of mAb 5C3 binding was calculated as a change in mean channel fluorescence with respect to control untreated cells. Rapid loss of surface TrkA is interpreted as receptor internalization, which is delayed or inhibited by low temperatures or sodium azide (9).
Chemical Cross-linking
Live 4-3.6 single cell suspensions were bound by the indicated
ligand(s) for 45 min at 4 °C. Cells were then washed in
phosphate-buffered saline, cross-linked with 1 mM
disuccinimidyl suberate (Pierce) for 15 min at 15 °C as described
(31). Unreacted disuccinimidyl suberate was quenched with 5 mM ammonium acetate, and whole cells were lysed directly in
SDS sample buffer. Equal amounts of protein for each sample were
resolved in a 5-10% SDS-polyacrylamide gel electrophoresis gradient,
transferred to nitrocellulose, and Western blotted with anti-Trk
polyclonal antibody 203 (a gift of Dr. David Kaplan, McGill University)
that recognizes the intracellular domain of Trk. This antibody was
selected because of high specificity toward Trk in Western blots and
because its epitopes are not affected by disuccinimidyl suberate
cross-linking.
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RESULTS |
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Cell Survival Induced by Monovalent and Bivalent TrkA
Ligands--
Previously, we showed that anti-human TrkA mAb 5C3
significantly protected cells from apoptosis when cultured in
serum-free medium (SFM), but anti-p75 mAb MC192 did not promote cell
survival. Combinations of anti-TrkA mAb 5C3 and anti-p75 mAb MC192
synergized to protect cells optimally to levels comparable with 1 nM NGF, as did combinations of mAb MC192 and 10 pM NGF (6). Therefore, we tested 4-3.6 cells (human
TrkA+++ rat p75+++) (Fig.
2A) or PC12 cels (rat
TrkA+ rat p75+++) (Fig. 2B) in the
same paradigm but using putative monovalent ligands.
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Significant protection was afforded by 5C3 Fabs, in a
dose-dependent manner. 5C3 Fabs at 1-10 nM
afford protection comparable with 10 pM NGF. More robust
protection was afforded by 1-10 nM 5C3 Fab·
-Fab
complexes. Negative control
-Fab or mouse IgG did not afford
survival. Positive control bivalent mAb 5C3 at the optimal
concentration of 0.5 nM protected ~50% of the cells.
Interestingly, 10 nM 5C3 Fab·
-Fab complexes afforded
significantly higher protection than 0.5 nM 5C3 IgG,
possibly because 5C3 Fab·
-Fab complexes are more flexible than IgG
or oligomerize TrkA more efficiently.
Monovalent p75 Ligands Do Not Potentiate NGF Signals--
1
nM NGF protects PC12 cells (expressing rat
TrkA+ rat p75+++) from apoptosis induced by
culture in SFM. Low concentrations of NGF (10 pM) as a high
affinity ligand afforded ~30% survival. Monovalent MC192 Fabs failed
to synergize with 10 pM NGF, and protection was not
significantly different than 10 pM NGF alone. Synergy did
occur with MC192 Fab·
-Fab complexes plus 10 pM NGF. The effect was dependent on the concentration of MC192 Fab·
-Fab complexes (data not shown) and was optimal at 1 nM
cross-linked MC192 Fab.
As positive control, bivalent MC192 synergized with 10 pM
NGF increasing protection from ~30 to ~90%. Synergy was dependent on the concentration of mAb and was optimal at 0.5 nM MC192
(data not shown). Controls
-Fab, mouse IgG, bivalent MC192,
monovalent MC192 Fabs, and MC192 Fab·
-Fab complexes alone did not
protect PC12 cells substantially from apoptosis. In all permutations of these experiments, apoptotic cell death was confirmed by analysis of
DNA fragmentation patterns (data not shown).
Synergy of Bivalent and Monovalent Ligands of NGF
Receptors--
To analyze the valency requirement of each NGF
receptor, combinations of bivalent and monovalent antibody-based
ligands were tested on 4-3.6 cells for synergy in protection of
apoptotic cell death (Fig. 3). In these
assays, it was encouraging to observe that comparable biological
responses by different ligands (e.g. 1 nM
cross-linked 5C3 Fabs afford the same protection as 0.5 nM 5C3 bivalent IgG) also result in equivalent receptor occupancy (e.g. 1 nM Fabs bind the same number of
receptors as 0.5 nM IgG). Positive controls of bivalent 5C3
combined with bivalent MC192 were synergistic and afforded 100%
protection. Negative controls
-Fab alone and mouse IgG alone did not
afford cell survival in SFM (data not shown).
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A combination of monovalent 5C3 Fab with either monovalent MC192 Fab or
with bivalent MC192 did not result in synergy; the ~25% protection
was not significantly different from that seen with monovalent 5C3 Fab
alone. However, 5C3 Fab·
-Fab complexes synergized with bivalent
MC192. A combination of monovalent MC192 Fab with bivalent 5C3 did not
result in synergy; the ~50% protection was not significantly
different than that afforded by bivalent 5C3 alone. In contrast, MC192
Fabs·
-Fab complexes synergized with bivalent 5C3 and afforded
~110% protection. One bias in this assay is that
-Fab
cross-linking does not occur exclusively at MC192 Fabs but also occurs
upon bivalent 5C3, resulting in some multivalent 5C3 oligomers.
However,
-Fab cross-linking of bivalent 5C3 IgG does not enhance its
activity (data not shown), therefore the biological effect of
cross-linking occurs at the MC192 Fabs.
Last,
-Fab cross-linking of 1 nM MC192 Fab plus 5C3 Fab
afforded ~65% protection. This activity can be ascribed to four
theoretical ligand mixtures: 5C3 dimers (25%), MC192 dimers (25%),
and 5C3/MC192 heterodimers (50%). If the 5C3/MC192 heterodimers are
indeed formed, they seem to be inactive, because we observed that
reducing the concentration of bivalent mAbs 5C3 and MC192 to 0.125 nM (the concentrations in the theoretical mixtures above)
results in synergy and ~65% protection (data not shown).
While the date is suggestive that heterodimers are inactive, this is an
unclear issue, because we have no evidence that the heterodimers indeed
form. The putative heterodimeric ligands cannot be isolated and
analyzed because they dissociate and reassociate during purification;
nor can they be stabilized, because binding activity is lost upon
chemical cross-linking. Additionally, it is noteworthy that more
extensive cross-linking with higher ratios of
-Fab did not increase
protection, although higher oligomerization of ligands is expected
(data not shown).
For clarity, only nearly optimal concentrations of ligands are
presented, but responses from micromolar to picomolar concentrations were studied (see "Materials and Methods"). Thus, optimal
protection is afforded by combinations that result in homodimerizing
ligands, and no increased protection is seen with oligomerizing
ligands. In all permutations of these experiments, apoptotic cell death was confirmed by analysis of DNA fragmentation patterns (data not
shown). Moreover, the ligands mediate trophic effects in a TrkA-dependent manner, because no concentration or
combination of NGF and antibody could induce significant protection of
B104 cells (TrkA
, p75+++) (data not shown).
Ligand Valency and TrkA Tyrosine Phosphorylation--
TrkA
tyrosine phosphorylation (TrkA-Tyr(P)) was studied as a biochemical
correlate of cell survival in SFM (Fig.
4). Analysis was done by Western blotting
with mAb 4G10 against phosphotyrosine (total Tyr(P)), or with
antibodies against phosphorylated tyrosine 490 of TrkA
(Tyr(P)490), which is the Shc binding site of TrkA. A
representative Western blot of total Tyr(P) is shown in Fig.
4A. Statistical analysis of densitometry for several blots
of total TrkA-Tyr(P) (Fig. 4B, upper
panel), and for several blots of TrkA-Tyr(P)490
(Fig. 4B, lower panel) were used to
quantify the TrkA-Tyr(P) data. Western blotting with anti-TrkA
antibodies, done in parallel, demonstrated that all lanes contained the
same amount of receptor (data not shown).
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Monovalent 5C3 Fabs induced small but significant increases in
TrkA-Tyr(P) (Fig. 4A, lane 2) and
TrkA-Tyr(P)490 compared with untreated control (Fig.
4A, lane 1) or MC192 Fabs (Fig.
4A, lane 4). Much higher signals were
induced by 5C3 Fab·
-Fab complexes (Fig. 4A,
lane 3). Quantification showed that ~80% of total TrkA-Tyr(P) and ~55% of TrkA-Tyr(P)490 were
induced compared with optimal NGF-induced signals (Fig. 4B).
In contrast, no significant TrkA-Tyr(P) or TrkA-Tyr(P)490
was induced by p75 ligands bivalent MC192, MC192 Fab·
-Fab
complexes, or monovalent MC192 Fabs (Fig. 4A,
lanes 10, 5, and 4). For
quantitative statistical analysis of these data, see Fig.
4B. All of these findings are consistent with the survival data.
There were no significant differences between treatments with 5C3 Fabs
plus MC192 Fabs (Fig. 4A, lane 6)
versus 5C3 Fabs alone (Fig. 4A, lane
2), indicating a lack of synergy. Cross-linking of 5C3 Fabs
plus MC192 Fabs with
-Fab afforded an increase in total Tyr(P) (Fig.
4A, lane 7).
Approximately 85% of total Tyr(P) and ~65% of Tyr(P)490
of TrkA were induced compared with optimal NGF-induced levels (Fig.
4B). However, the increases in TrkA Tyr(P) and
Tyr(P)490 induced by 5C3 Fab·MC192 Fab·
-Fab
complexes were not statistically different from increases induced by
5C3 Fab·
-Fab complexes (Fig. 4B). All of these findings
are consistent with the survival data.
Thus, 5C3 Fabs are partial agonist monovalent ligands of TrkA that induce receptor activation and lead to trophic cell survival. Although the evidence that mAb 5C3 Fabs are indeed monomeric is compelling (see "Materials and Methods"), it is possible that these large Fab molecules of ~50 kDa could aggregate. Hence, other ligands were tested.
Characterization of Small Molecule Monomeric TrkA
Ligands--
C(92-96) is a small molecule (~1 kDa), cyclic and
conformationally constrained peptide analog of the C-D
-turn region
of a single NGF protomer. Therefore, the C(92-96) mimic of NGF was studied as a candidate genuine monovalent and monomeric TrkA ligand.
To address the valency of C(92-96), we determined the solution
structure of the pharmacophore to better than 0.5 Å root mean square
deviation. Nuclear Overhauser effect and total correlation spectroscopy
spectra were consistent with a monomeric, nonaggregated state and a
five-residue pharmacophore within a
-turn (27). Five chemical
moieties are too few to bind two receptors simultaneously as a bivalent
agent, hence this ligand is monovalent.
The following criteria indicate that C(92-96) is monomeric. First,
mass spectroscopy of C(92-96) demonstrated that there were no covalent
dimers or oligomers (see "Materials and Methods"). Second, the
aggregation state of the peptide at millimolar concentrations in
solution was resolved by high resolution proton NMR spectroscopy (Fig.
5A). Third, natural
13C abundance NMR relaxation parameters were measured for
the
-carbon atom, heteronuclear NOEs, and the molecular correlation
time of C(92-96) was assessed. The overall correlation time detected
of 1.76 ns at 5 °C is expected for a monomer. Fourth, the
translational self-diffusion constant in solution unequivocally
identified C(92-96) as monomeric.
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Pulse field gradient NMR measurements of the self-diffusion coefficient
(
) were determined at various peptide concentrations of 2, 6, or 18 mM; T = 278 K. Values of
= 1.01 ± 0.07 (10
6 cm2/s);
= 1.00 ± 0.06 (10
6 cm2/s); and
= 1.04 ± 0.05 (10
6 cm2/s) were measured
for 18, 6, and 2 mM samples, respectively (Fig. 5B). These
values are essentially the same, indicating
an identical state for the peptide. Thus, the samples remain monomeric,
and peptide aggregates are undetectable in solution even at
concentrations as high as 18 mM. We estimate that the
self-association constant for any putative aggregate cannot be larger
than 10 M
1. Thus, a 10 µM
solution of C(92-96) (used hereafter) could not contain >1
nM self-aggregated dimers, if any aggregate at all.
Small Molecule Monomeric and Monovalent Agonists of TrkA-- Four questions were addressed. First, the genuine monovalent and monomeric TrkA ligand C(92-96) was tested for trophic support of cells in SFM. Second, a covalent dimeric analog of C(92-96) termed C(92-97)dimer was also evaluated to directly compare the potency and efficacy of monomeric versus dimeric small molecule TrkA ligands. Third, to study whether surface density of TrkA receptors influences trophic signals, these agents were assayed in parallel on cell lines that differ only in TrkA density (PC12 versus 6-24, and B104 versus 4-3.6 cells). Fourth, to study whether the ligands activate receptors in normal neurons, primary cultures of dissociated dorsal root ganglia from day 17 rat embryos were tested. These cells express TrkA and p75 receptors, and their survival and differentiation are dependent on TrkA activation. Growth and survival were studied first in MTT assays (Table I). Differentiation was studied morphometrically (Fig. 6).
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The trophic response was dependent on NGF dose and was optimal to 1 nM NGF in all cell types (Table I, row 1). Better survival was seen at 10 pM NGF for 6-24 and 4-3.6 cells (Table I, row 3), suggesting that high TrkA expression affords better efficacy when ligand concentrations are limiting. B104 cells did not respond to any dose of NGF (data not shown). Negligible survival to 10 pM NGF in DRG cultures is due to the fact that DRG cultures are heterogeneous and secrete growth factors, masking the effect of low concentrations of exogenous NGF.
The C(92-96) NGF mimic did not afford significant survival of PC12, 6-24, or 4-3.6 cells compared with control linear peptides, but it did afford significant survival of DRG cultures (Table I, row 4 versus row 6). This effect was dose-dependent, and C(92-96) at 1 µM afforded ~10% growth of DRG (data not shown). In contrast, the C(92-97)dimer peptide afforded good trophic support for 6-24 and 4-3.6 cells and very low but statistically significant support for PC12 cells (Table I, row 5). The 6-2.4 and 4-3.6 cells express comparable numbers of TrkA receptors, suggesting a TrkA density-dependent response.
MAb MC192 alone afforded very low or insignificant trophic support of cell lines (Table I, row 7); but as a bivalent p75 ligand, it synergizes with TrkA ligands (e.g. see Fig. 2). High DRG survival in response to mAb MC192 alone (Table I, rows 7 and 10) is explained by the mAb potentiating endogenously produced growth factors. Furthermore, bivalent MC192 potentiated the activity of C(92-96) (Table I, row 8). In cell lines the combination is synergistic, while in DRG cultures the combination is additive due to high protection afforded by each ligand alone.
As a control, bivalent MC192 did not synergize with linear peptides
(Table I, row 10). Further controls using B104 cells (TrkA
, p75+++ parental to 4-3.6) demonstrated
no protection by the peptide NGF mimics, alone or in combination with
mAb MC192 (data not shown), suggesting that the activity requires TrkA expression.
Monovalent TrkA Ligands Induce the Differentiation of Embryonic DRG Cultures-- The differentiation of dissociated primary DRG cultures was studied (Fig. 6). Untreated DRG cultures had sparse, bipolar, and poorly differentiated neurons (Fig. 6A). At 20 pM NGF the increase in the number and the length of neurites and branches was very low (Fig. 6B); at 1 nM NGF the increase was optimal (Fig. 6C). Treatment with control linear peptide did not induce differentiation (not shown). Treatment with 0.5 nM MC192 alone (Fig. 6D) or with 10 µM C(92-96) alone (Fig. 6E) induced substantial differentiation. However, treatment with a combination of 10 µM C(92-96) plus 0.5 nM MC192 (Fig. 6F) induced higher differentiation, comparable with that induced by 1 nM NGF. These differentiation data are consistent with synergy in survival seen for cell lines and primary cultures (see Table I).
Monovalent TrkA Ligands Induce TrkA Tyrosine Phosphorylation in
Synergy with Bivalent p75 Ligands--
To further assess whether the
signals induced by small cyclic peptides are mediated by TrkA, tyrosine
phosphorylation of the receptor was studied in 4-3.6 cells (Fig.
7). Representative anti-Tyr(P) Western
blots are shown in Fig. 7A. A summary of densitometric analysis from several blots is given in Fig. 7B.
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C(92-96) alone did not induce an increase in TrkA-Tyr(P) compared with untreated cells or cells treated with control linear peptide or bivalent MC192 (Fig. 7A, lane 4 versus lanes 1, 6, and 7). Significant TrkA-Tyr(P) was induced by treatment with C(92-97)dimer (Fig. 7A, lane 5), representing ~30% of that induced by 1 nM NGF (Fig. 7A, lane 2). Combinations of mAb MC192 and C(92-96) peptide (Fig. 7A, lane 8) or mAb MC192 and C(92-97)dimer peptide (Fig. 7A, lane 9) afforded notable increases in TrkA-Tyr(P), comparable with those induced by 10 pM NGF (Fig. 7A, lane 3). These results are consistent with the survival data. In contrast, treatment with a combination of bivalent MC192 and linear peptide controls (Fig. 7A, lane 10) did not result in significant increases in TrkA-Tyr(P). For statistics of densitometric analysis, see Fig. 7B.
Small Molecule Monovalent Ligands Induce TrkA Receptor
Homodimerization--
TrkA tyrosine phosphorylation leading to trophic
and differentiative signals require TrkA homodimerization. To study
whether monovalent C(92-96) peptide induces TrkA homodimerization,
chemical cross-linking studies of the receptor were done in 4-3.6 cells (Fig. 8). Cells were treated as
indicated, followed by chemical cross-linking, and then were
detergent-solubilized and analyzed by Western blotting with anti-Trk
polyclonal antibody 203.
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A doublet consistent with previously reported TrkA monomers of p110 and p140 was seen in all samples (Fig. 8, arrows). Samples from NGF-treated cells and in C(92-96) plus MC192-treated cells had a band of ~280 kDa, consistent with the molecular mass of TrkA-TrkA homodimers (Fig. 8, lanes 2 and 5). This band was also detected, albeit weakly, in samples from cells treated with C(92-96) alone (Fig. 8, lane 4). A second band of ~220 kDa (that may be consistent with cross-linked p140-p75 heterodimers or p110 homodimers) was seen in samples from NGF-treated cells and more weakly in C(92-96) plus MC192-treated cells (Fig. 8, lanes 2 and 5). The 280-kDa and 220-kDa bands were not seen in untreated cross-linked cells (Fig. 8, lane 1), in cells treated with MC192 alone (Fig. 8, lane 3), or in linear peptide control with or without MC192 treatment (data not shown). Similar data were obtained whether whole cell lysates were analyzed or cell lysates were immunoprecipitated with anti-TrkA antibodies prior to Western blotting (data not shown).
Given that the efficiency of chemical cross-linking is <5% of the TrkA expressed on the cell surface, we have not studied the individual components of the 280- and 220-kDa bands other than the fact that they contain TrkA. However, it is unlikely that these bands comprise NGF, because they are detected in the C(92-96) plus MC192-treated cells.
Small Molecule Monovalent Ligands Induce TrkA Receptor Internalization-- Next, we assessed whether the monomeric C(92-96) peptide binds to a receptor domain that overlaps with mAb 5C3. This study was done by attempting to block mAb 5C3 binding with C(92-96). Moreover, since agonistic ligands are expected to cause receptor internalization, it was of interest to study whether monomeric ligands such as C(92-96) can induce TrkA internalization.
We studied ligand-dependent receptor internalization as a decrease of surface receptor density, which can be inhibited by low temperature or by poisons such as sodium azide. 4-3.6 cells were treated with NGF, C(92-96) peptide, or control peptides in the presence or absence of sodium azide at different temperatures. Surface TrkA receptors were quantitated by FACScan analysis with mAb 5C3 before and after 20 min of internalization (Table II). This time was selected because the t for 125I[NGF] internalization is ~10 min (9).
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C(92-96) did not block surface mAb 5C3 binding sites at 4 °C (Table II, row 2). Treatment with C(92-96) at 37 °C caused a ~23% loss of surface mAb 5C3 binding sites (Table II, row 2). This effect was sensitive to sodium azide (Table II, row 3). A 23% loss of surface TrkA represents ~11,000 receptors that presumably internalized out of ~50,000 expressed at the surface. Similar results were obtained with C(92-97) (data not shown). Negative control linear peptides did not affect the number of mAb 5C3 binding sites (Table II, rows 4 and 5).
In positive control studies, treatment with NGF at 4 °C blocked
~21% of the surface mAb 5C3 binding sites (Table II, row 1; also
published in Ref. 19), suggesting that NGF partially blocks mAb 5C3.
Treatment with NGF at 37 °C increased loss of surface mAb 5C3
binding sites from ~21 to ~46% (Table II, row 1), probably because
of TrkA internalization.
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DISCUSSION |
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We demonstrate that artificial ligands selective for subunits of receptor complexes can be used to study receptor structure-activity relationships in systems where each subunit has distinct or unclear functions. For NGF receptors, the main novel findings of this study are as follows: (i) genuine monomeric and monovalent ligands of TrkA can be partial agonists, suggesting that bivalent ligands are not the sole mechanism for dimerizing and/or activating tyrosine kinase receptors; (ii) the monovalent p75 ligands used in this study do not enhance TrkA-mediated signals, suggesting that p75 ligands may require bivalency; and (iii) bivalent ligands that induce TrkA-TrkA and p75-p75 homodimers afford optimal signals. Putative ligand-induced TrkA-p75 heterodimers do not seem to afford signals, and receptor oligomerization does not result in enhanced signals.
While it is well established that physiological ligands activate signal transduction by inducing receptor dimerization, allosteric models of receptor activation have also been proposed (15, 32-36). There are two major obstacles to studying allosteric models experimentally. First, there is a paucity of monovalent ligands that activate receptor tyrosine kinases (18). Second, the role of each subunit must be considered in the analysis of heteromeric receptors, and agents that bind to and affect the activity of each subunit must be available. We postulate that the strategy of using growth factor-derived and antibody-based artificial ligands can be easily adapted to study other multisubunit receptors, or for receptors where a subunit has unclear function or no defined ligand. Also, strategies that develop monovalent small molecule agonists that bind to the extracellular domain of receptors will be useful for the discovery of pharmacological agents.
Valency, Avidity, and Aggregation State of Agonistic Ligands-- Monovalent ligands 5C3 Fabs and C(92-96) are partial agonists. For T cell receptor complexes and G-coupled receptors, it has been shown that sometimes ligands with high affinity can overcome low avidity and lead to activation or to conformational changes (37-39). This does not seem to be the case for the ligands 5C3 Fabs or C(92-96) because their affinity ranges from nanomolar to micromolar. Hence, N-Ac-C(92-96) is a ligand of relative low affinity and avidity that can induce or stabilize putative TrkA homodimers. Since receptor dimerization alone does not necessarily cause activation (15, 17), the simplest interpretation is that the TrkA ligands induce allosteric or conformational changes, as shown for other receptors (16, 18, 35). However, this report would be a case where monomeric and monovalent ligands induce allosteric or conformational changes.
Arguably, 5C3 Fabs could aggregate in solution as do other large peptides (40), but this is unlikely to occur at nanomolar Fab concentrations in 0.2% bovine serum albumin and did not occur at micromolar Fab concentrations in related studies (41). Hence, we conclude that Fabs are monomeric. It is also unlikely that 5C3 Fabs are bivalent, and sequence analysis of the variable complementarity-determining regions of mAb 5C3 excluded this possibility.2
More conclusively, the genuine monomeric small peptide C(92-96) affords trophic signals, although the dimeric C(92-97)dimer is more efficient. Monomeric C(92-96) is monovalent, because it has a 5-residue pharmacophore (27) and could not interact with two receptors simultaneously. The intriguing possibility that C(92-96) could dimerize after docking is unlikely (see below), but it remains unexplored and would require structural analysis of receptor-ligand complexes.
Ligand Density at the Cell Surface--
The optimal functional
concentration of the peptide N-Ac-C(92-96) and of mAb 5C3
and 5C3 Fabs approximates their Kd (10 µM, 2 nM, and 5 nM,
respectively). In contrast, the optimal functional concentration of 1 nM NGF is 2-3 orders of magnitude above its
Kd (~10
11 to 10
12
M). It is unlikely that these differences reflect
requirements for receptor occupancy. It is more likely that NGF, the
mAbs, or the peptides have different half-lives in solution at 37 °C or that they are bound by matrix proteoglycans or carrier proteins.
In some cases, the local concentration of a ligand at the cell surface can be higher than in solution, making the ligands more likely to dimerize or to aggregate. While the mobility of a ligand is reduced to two dimensions when bound to a receptor, ligand mobility within the plane of the membrane is still exclusively dependent on the receptor. Therefore, monovalent ligands could only dimerize subsequent to inducing their receptors to dimerize. In addition, we estimate that a cell expressing 50,000 receptors out of which 5% are bound would achieve a local ligand concentration of ~10 mM. This concentration was tested by NMR for monovalent C(92-96) with no evidence of aggregation. Last, we demonstrated that the monovalent ligands induce rapid receptor internalization, which will effectively reduce possible high local concentrations of ligand at the cell surface. It is noteworthy that self-aggregation of C(92-96) beyond the detection of NMR is unlikely to account for the effects, because C(92-97)dimer at high nM concentrations did not afford signals.
Mechanism of Action of TrkA and p75 Ligands-- How can conformational changes induced by monovalent ligands lead to receptor dimerization? While the function of the monovalent ligands is defined by comparison with the natural ligand NGF, their mechanism of action may differ. We hypothesize three possible mechanisms: (i) conformational changes that favor direct dimerization; (ii) a reduction of the rate at which preformed receptor dimers disengage; and (iii) increased receptor mobility with a consequent increase in spontaneously dimerized receptors.
The most attractive explanation is that the monovalent ligands could be inverse antagonists (32, 33). Inverse antagonists can stabilize receptor conformation(s) that are favorable to subsequent TrkA-TrkA interactions. Indeed, one criterion for defining inverse antagonists is that their potency increases with increased receptor density on the cell surface, and this was observed for the activity of C(92-96) and C(92-97)dimer in PC12 cells that have low TrkA numbers versus 6-24 and 4-3.6 cells that have high TrkA numbers. Furthermore, an inverse antagonist would antagonize the natural agonist NGF, and NGF blocking properties have been shown previously for C(92-96) (20, 21). Last, as expected, the C(92-97)dimer affords higher signals, which would be predicted for a bivalent ligand that induced receptor dimerization directly.
With respect to p75 receptors, bivalent ligands potentiate the effects
of all bivalent TrkA ligands (NGF, mAb 5C3, 5C3
Fab·
-Fab complexes, and C(92-97)dimer). However,
bivalent p75 ligands did not potentiate all monovalent TrkA
ligands. mAb MC192 potentiated the activity of C(92-96), but it did
not potentiate the activity of 5C3 Fabs. These data suggest that these
monovalent TrkA ligands probably have different mechanisms of
activation, and this possibility is supported by the fact that
C(92-96) and 5C3 Fabs bind to nonoverlapping sites.
We speculate that a small molecule like C(92-96) docks onto a small pocket of TrkA and may therefore be sensitive to a documented p75-mediated regulation (6, 7) or internalization (9, 42, 43) of TrkA. Consequently, C(92-96) may be sensitive to ligands binding p75 concomitantly, whereas larger molecules like 5C3 Fabs possess more extended TrkA binding surfaces and do not exhibit this sensitivity. Hence, two classes of partial agonism (or inverse antagonism) by monomeric TrkA ligands may have been uncovered in this study.
Agonistic Ligand Binding Sites-- MAb 5C3 and the NGF analog C(92-96) do not block each other's binding; hence, they bind to nonoverlapping sites of TrkA. Ligands docking onto restricted receptor pockets or "hot spots" are presumed to be more efficient at mediating (ant)agonistic function (34, 44). Reportedly, there are at least two activating TrkA "hot spots" (45-48) encompassing the IgC-2-like domain and the leucine-rich motif.
mAb 5C3 binds an epitope within the IgC-2-like domain of TrkA, and the epitope is stabilized by disulfide bonds (19). TrkA and other tyrosine kinase receptors have a dimer interface stabilized by disulfide bonds (49, 50). The agonistic "hot spot" of mAb 5C3 and 5C3 derivatives may be at the dimer interface of this receptor. However, 5C3 and C(92-96) do not block each other; hence, the data suggest that C(92-96) binds elsewhere. NGF may utilize both sites to fully activate the receptor.
Conclusions-- The screening of functional small molecule ligands that bind multisubunit receptors may require testing ligand combinations that target all subunits. It would be of interest to test other NGF receptor ligands or activators in this paradigm of synergy, including peptidic small molecule p75 ligands (21) or similar peptides reproduced by others (51, 52), organic p75 ligands, gangliosides, and alkaloid derivatives that activate TrkA (53-55).
With respect to NGF receptors, our results support the hypothesis that functional receptors consist of TrkA homodimers and p75 homodimers. Our results also demonstrate that genuine monovalent and monomeric ligands of TrkA tyrosine kinase receptors can be functionally agonistic. Recently, two small molecule ligands of other receptors were shown to be agonistic. In one, a mimic of granulocyte colony-stimulating factor activated the granulocyte colony-stimulating factor receptor (56), but no studies of the aggregation state of the ligand were performed. In another, a small molecule activated the insulin receptor tyrosine kinase (57). However, this insulinomimetic ligand is a symmetrical lipophylic agent, in principle capable of dimerizing the receptor as shown for similar ring structures (16). Hence, our study is the first formal proof, to our knowledge, of genuine monovalent ligands of the extracellular domain of a tyrosine kinase acting as partial agonists by inducing or stabilizing receptor homodimers.
Neurotrophins and their receptors play a role in
neurodegenerative diseases, pain, and neoplasias (44). Internalizing
TrkA ligands could be exploited to deliver radioligands, toxins,
oligonucleotides, or membrane-impermeable molecules selectively to
receptor-expressing cells. This study has implications for the design
and screening of small molecules with pharmacological, diagnostic, or
targeting activity for neurotrophin receptors.
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FOOTNOTES |
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* This work was supported by grants from the Medical Research Council of Canada (MRCC) (to H. U. S.) and the National Cancer Institute of Canada (to K. G.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
§ Recipient of a GlaxoWellcome studentship.
¶ Recipient of a Lavoisier fellowship.
** Recipient of a fellowship from the Fonds de Recherche en Santé de Québec.
§§ Scholar of the MRCC and the Pharmaceutical Manufacturer's Association of Canada. To whom correspondence should be addressed: McGill University, Pharmacology and Therapeutics, 3655 Drummond St. #1320, Montréal, Québec H3G 1Y6, Canada. Tel.: 514-398-3628; Fax: 514-398-6690; E-mail: Uri@pharma.mcgill.ca.
2 H. U. Saragovi, unpublished data.
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ABBREVIATIONS |
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The abbreviations used are: NGF, nerve growth factor; mAb, monoclonal antibody; DRG, dorsal root ganglia; FPLC, fast protein liquid chromatography; N-Ac, N-acetyl; SFM, serum-free medium; MTT, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide.
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