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Originally published In Press as doi:10.1074/jbc.M000572200 on April 11, 2000

J. Biol. Chem., Vol. 275, Issue 27, 20324-20336, July 7, 2000
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Molecular Basis of Ligand Recognition by Integrin alpha 5beta 1

I. SPECIFICITY OF LIGAND BINDING IS DETERMINED BY AMINO ACID SEQUENCES IN THE SECOND AND THIRD NH2-TERMINAL REPEATS OF THE alpha  SUBUNIT*

A. Paul MouldDagger, Janet A. Askari, and Martin J. Humphries

From the Wellcome Trust Centre for Cell-Matrix Research, School of Biological Sciences, University of Manchester, Manchester M13 9PT, United Kingdom

Received for publication, January 27, 2000, and in revised form, March 30, 2000

    ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

The NH2-terminal portion (putative ligand-binding domain) of alpha  subunits contains 7 homologous repeats, the last 3 or 4 of which possess divalent cation binding sequences. These repeats are predicted to form a seven-bladed beta -propeller structure. To map ligand recognition sites on the alpha 5 subunit we have taken the approach of constructing and expressing alpha V/alpha 5 chimeras. Although the NH2-terminal repeats of alpha 5 and alpha V are >50% identical at the amino acid level, alpha 5beta 1 and alpha Vbeta 1 show marked differences in their ligand binding specificities. Thus: (i) although both integrins recognize the Arg-Gly-Asp (RGD) sequence in fibronectin, the interaction of alpha 5beta 1 but not of alpha Vbeta 1 with fibronectin is strongly dependent on the "synergy" sequence Pro-His-Ser-Arg-Asn; (ii) alpha 5beta 1 binds preferentially to RGD peptides in which RGD is followed by Gly-Trp (GW) whereas alpha Vbeta 1 has a broader specificity; (iii) only alpha 5beta 1 recognizes peptides containing the sequence Arg-Arg-Glu-Thr-Ala-Trp-Ala (RRETAWA). Therefore, amino acid residues involved in ligand recognition by alpha 5beta 1 can potentially be identified in gain-of-function experiments by their ability to switch the ligand binding properties of alpha Vbeta 1 to those of alpha 5beta 1. By introducing appropriate restriction enzyme sites, or using site-directed mutagenesis, parts of the NH2-terminal repeats of alpha V were replaced with the corresponding regions of the alpha 5 subunit. Chimeric subunits were expressed on the surface of Chinese hamster ovary-B2 cells (which lack endogenous alpha 5) as heterodimers with hamster beta 1. Stable cell lines were generated and tested for their ability to attach to alpha 5beta 1-selective ligands. Our results demonstrate that: (a) the first three NH2-terminal repeats contain the amino acid sequences that determine ligand binding specificity and the same repeats include the epitopes of function blocking anti-alpha subunit mAbs; (b) the divalent cation-binding sites (in repeats 4-7) do not confer alpha 5beta 1- or alpha Vbeta 1-specific ligand recognition; (c) amino acid residues Ala107-Tyr226 of alpha 5 (corresponding approximately to repeats 2 and 3) are sufficient to change all the ligand binding properties of alpha Vbeta 1 to those of alpha 5beta 1; (d) swapping a small part of a predicted loop region of alpha V with the corresponding region of alpha 5 (Asp154-Ala159) is sufficient to confer selectivity for RGDGW and the ability to recognize RRETAWA.

    INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

Integrins are alpha ,beta -heterodimeric transmembrane receptors that play central roles in cell adhesion, migration, differentiation, and survival (1). More than 20 distinct integrin heterodimers have been identified, and each integrin recognizes a different set of extracellular matrix or cell-surface proteins. The major sequences recognized by integrins within their ligands have been shown to be short motifs that contain a critical Asp or Glu residue, such as Arg-Gly-Asp (RGD).1 Analysis of the three-dimensional structures of integrin ligands has revealed that these recognition motifs are displayed in surface-exposed sites (2, 3).

Ligand-binding sites within integrins are less well characterized. Although ligand recognition is known to involve the NH2-terminal regions of both alpha  and beta  subunits (4, 5), unresolved questions include (i) what is the precise location of the ligand-binding sites? and (ii) how is the specificity of integrin-ligand binding determined?

The tertiary structure of integrins has not yet been determined; however, high quality structure predictions have been made for the ligand-binding domains of both subunits. These predictions are supported by extensive biochemical analyses (6-9). The NH2-terminal portion of integrin alpha  subunits has been shown to contain seven homologous repeats, each 60-70 amino acid residues in length. Repeats 4-7 (or in some integrins repeats 5-7) contain putative divalent cation-binding sites (10). The seven NH2-terminal repeats are predicted to fold cooperatively into a seven-bladed beta -propeller (11). Each blade of the propeller contains four beta -strands connected by loops of varying length; these strands are tilted such that the connecting loops are either on the lower or upper surfaces of the propeller. Loops between the first and second, and between the third and fourth beta -strands lie on the lower surface of the propeller, whereas loops between the second and third beta -strands, and between the fourth beta -strand of one blade and first beta -strand of the next blade lie on the upper surface. The divalent cation-binding sites are predicted to lie on the lower surface of the propeller.

An inserted (I or A) domain of about 200 amino acid residues is present in about one-third of integrin alpha  subunits, lying between repeats 2 and 3. In alpha  subunits that contain an A-domain, this module contains the major sites involved in ligand binding (2, 9, 12-14). Ligands have been shown to interact with the top face of this domain through a metal ion-dependent adhesion site (MIDAS) motif (15-18). Although the A-domain is present in only a subset of alpha  subunits, the region of the beta  subunit that participates in ligand recognition has been predicted to have a tertiary fold similar to that of an A-domain (19-22). This domain may also interact with ligand through a MIDAS site (19-25).

A large number of studies have investigated the location of ligand-binding sites in alpha  subunits that lack an A-domain but no consensus has emerged. Cross-linking of a peptide from the gamma  chain of fibrinogen to alpha IIbbeta 3 showed that the major site of interaction was in the fifth NH2-terminal repeat (26). An RGD-containing peptide also cross-linked to alpha Vbeta 3 via a site in the divalent cation binding repeats, although some cross-linking was also observed to the second and third repeats (27). In addition, recombinant proteins containing repeats 4-7 of alpha IIb or alpha 5 have been shown to possess ligand binding activity (28, 29). In contrast to these findings, the epitopes of function blocking anti-alpha subunit mAbs have been localized to repeats 1-3 (4, 8, 30-36), and mutations in repeats 2-4 of alpha 3, alpha 4, alpha 5, and alpha IIb have been shown to perturb ligand recognition (6, 33-39).

Integrin alpha 5beta 1 is a widely distributed cell surface receptor for fibronectin, and has served as a prototype for the study of integrin-ligand interactions. The central cell-binding domain (CCBD) of fibronectin contains a number of repeated modules termed fibronectin type III repeats. An RGD sequence in the tenth type III repeat is the major binding site for alpha 5beta 1 (40, 41); however, alpha 5beta 1 differs from other fibronectin-binding integrins, such as those of the alpha V family, in that ligand recognition is also strongly dependent on binding of a synergy sequence (Pro-His-Ser-Arg-Asn) in the ninth type III repeat (42-44). In addition, although several closely related integrins (such as alpha Vbeta 1, alpha Vbeta 3, alpha Vbeta 5, and alpha IIbbeta 3) recognize the RGD sequence, the nature of the amino acid residues COOH-terminal to RGD has a major effect on the affinity and specificity of integrin binding. For example, alpha 5beta 1 shows strong selectivity toward peptides containing the sequence RGDGW, whereas alpha V integrins bind well to peptides containing the sequences RGDXF or RGDXR (where X is frequently Ser or Thr) (45, 46). In addition, a specific ligand peptide for alpha 5beta 1, Arg-Arg-Glu-Thr-Ala-Trp-Ala (RRETAWA), has been isolated from a Cys-X7-Cys phage display library (47). Although the RRETAWA sequence appears unrelated to RGD, the binding sites for RRETAWA and RGD on alpha 5beta 1 are closely overlapping because a peptide containing the RRETAWA sequence acts as a direct competitive inhibitor of RGD binding to alpha 5beta 1 (36).

A possible criticism of previous integrin mutagenesis studies is that only a loss of ligand binding was demonstrated, therefore it is possible that these mutations had an indirect effect on ligand recognition by perturbing integrin structure. Here we have taken the approach of constructing and expressing chimeric alpha V/alpha 5 subunits to determine the regions of alpha 5 that when introduced into alpha V cause gain of ligand-binding function. Our results show that replacing the second and third repeats of alpha V with those of alpha 5 converts alpha Vbeta 1 into a receptor with the same ligand binding specificity as alpha 5beta 1. Furthermore, we demonstrate that a short putative loop region connecting the second and third repeats is involved in the binding of RRETAWA and RGDGW-containing peptides. Our findings are consistent with the beta -propeller model and appear to rule out a direct role for the divalent cation-binding sites in ligand recognition.

    EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

Monoclonal Antibodies and Peptides-- MAbs 16 and 11 recognizing the human alpha 5 subunit, and mAb 13 recognizing the human beta 1 subunit were gifts from Dr. K. Yamada (National Institute of Dental Research, NIH, Bethesda, MD). Mouse anti-human alpha 5 mAbs VC5, P1D6, and SAM-2 were purchased from PharMingen (San Diego, CA), Life Sciences (Paisley, Scotland, United Kingdom), and Monosan (Uden, The Netherlands), respectively. Mouse anti-human alpha 5 mAbs SAM-1 and JBS5 were from Serotec (Oxford, UK). Mouse anti-human alpha V mAbs 14D9.F8 and 17E6 were gifts from Dr. S. Goodman (Merck KgaA, Darmstadt, Germany), rat anti-human alpha V mAb 69.6.5 was purchased from Coulter Electronics (Luton, UK), mouse anti-human mAb P3G8 was purchased from Chemicon (Harrow, UK), and mouse anti-human alpha V mAb LM142 was a gift from Dr. D. Cheresh (Scripps, La Jolla, CA). All antibodies were used as purified IgG. Rabbit, mouse, and rat IgG were obtained from Sigma (Poole, UK). The synthetic peptides GACRRETAWACGA, GCRGDGWCA, and GCRGDGRCA were obtained from Genosys Biotech Ltd. (Cambridge, UK). Peptides were cyclized using 10% Me2SO according to published protocols (48), and purified by filtration on Sephadex G-10 (Sigma).

Mutagenesis-- Full-length clones of human alpha V and alpha 5 were gifts from D. Cheresh (Scripps Research institute, La Jolla, CA) and K. Yamada (National Institute of Dental Research, NIH, Bethesda, MD), respectively. A 1.3-kilobase BamHI/HindIII fragment of alpha V was subcloned into pUC118. The following oligonucleotides (listed 5' to 3') were used to introduce restriction enzyme sites into alpha V by site-directed mutagenesis using the GeneEditor kit (Promega, Southhampton, UK): TTTGATGACAGCTACCTAGGTTATTCTGTGGC (AvrII site), GAGCATCTGTGAGGGCCCATGGGGATAAAATTTTGGC (NcoI site), GGACAGGGATTTTGCCAAGGAGGCTTCAGCATTGATTTTAC (BglI site). The mutations introducing the AvrII and BglI sites were silent; however, the mutation introducing the NcoI site caused changes to the amino acid sequence and so an additional base change was made to convert the amino acid sequence at this site to that of alpha 5 (S100KQ to A107HG).

The presence of the mutations was verified by restriction enzyme digestion of miniprep DNA (Qiagen) prepared from individual clones. To reconstitute full-length alpha V the mutated 5' BamHI/HindIII fragment of alpha V was ligated with a 3' HindIII/XbaI fragment of alpha V into pCDNA3 cut with BamHI and XbaI. To construct the alpha V/alpha 5(F1-G232) chimera, a BamHI/AvrII fragment of alpha 5 was ligated with an AvrII/ApaI fragment of alpha V into pCDNA3 cut with BamHI and ApaI. To construct the alpha 5/alpha V(F1-G223) chimera, a BamHI/AvrII fragment of alpha V was ligated with an AvrII/XhoI fragment of alpha 5 into alpha 5 in pCDNA3 cut with BamHI and XhoI. To construct the alpha V/alpha 5(A107-G232) chimera, a BamHI/NcoI fragment of alpha V was ligated with a NcoI/AvrII fragment of alpha 5 and an AvrII/ApaI fragment of alpha V into pCDNA3 cut with BamHI and ApaI. To construct the alpha V/alpha 5(A107-C164) chimera, a BamHI/NcoI fragment of alpha V was ligated with a NcoI/BglI fragment of alpha 5 and a BglI/XbaI fragment of alpha V into pCDNA3 cut with BamHI and XbaI. To construct the alpha V/alpha 5(C164-G232) chimera, a BamHI/BglI fragment of alpha V was ligated with a BglI/AvrII fragment of alpha 5 and an AvrII/ApaI fragment of alpha V into pCDNA3 cut with BamHI and ApaI. The constructs were verified by DNA sequencing. Chimeras were designated according to the position of the restriction site in the corresponding amino acid sequence.

The following oligonucleotides (listed 5' to 3') were used to exchange amino acid residues within putative loop regions of alpha V with the corresponding amino acid residues in alpha 5: CATTGGAGAACTGAGAAGGAGCCGCTGAGCGACCCTGTTGGAACATGC (Met118-Glu123 of alpha V with Lys125-Asp130 of alpha 5); GCTCCATGTAGATCAGATTTTAGTTGGGCTGCTGGACAGGGATTTTGT (Gln145-Asp150 of alpha V with Asp154-Ala159 of alpha 5); GGTGGTCCTGGTAGCTATTTTTGGCAAGGTCAGC (Phe177- Tyr178 of alpha V with Tyr186-Phe187 of alpha 5); CAATTAGCAACTCGGCAGGCATCATCTATTTTTGATGACAG (Thr212-Ala215 of alpha V with Gln221-Ser224 of alpha 5); AATAACCAATTACAAACTCGGCAGGC and GCATCATCTATTTATGATGACAGCTATTTG (Ala209 and Phe217 of alpha V with Gln218 and Tyr226 of alpha 5, respectively).

Oligonucleotides were purchased from MWG Biotech (Southampton, UK) or from PE-Applied Biosystems (Warrington, UK). Restriction enzymes were from New England Biolabs (Hitchin, UK) or Roche Molecular Biochemicals (Lewes, UK).

Proteins-- Recombinant fragments of the CCBD of fibronectin were produced as before (49) and purified using DEAE-Sephacel (Amersham Pharmacia Biotech) and hydroxylapatite (Bio-Rad, Hemel Hempstead, UK) chromatography, as described previously (5).

Coupling of Cyclic Peptides to IgG-- Rabbit IgG (3 mg) was dissolved in 1 ml of Dulbecco's PBS without Ca2+ and Mg2+ (PBS-). To this solution, approximately 0.5 mg of bis(sulfosuccinimidyl)suberate (Pierce, Chester, UK) dissolved in 1 ml of PBS- was added. The mixture was incubated for 5 min at room temperature, and then cyclic peptide (1-1.5 mg dissolved in 1 ml of PBS-) was added. After incubation of the mixture for 5 min at room temperature, unreacted peptide and cross-linker were removed by dialysis against PBS-. The dialysate was centrifuged at 13,000 × g for 15 min, and stored in aliquots at -70 °C.

Transfection-- Chinese hamster ovary cells B2 variant (50) (a gift from R. L. Juliano, University of North Carolina, NC) were maintained in Dulbecco's modified Eagle's medium supplemented with 10% fetal calf serum, 2 mM glutamine, and 1% non-essential amino acids (growth medium). Cells were detached using 0.05% (w/v) trypsin, 0.02% (w/v) EDTA in PBS, and plated overnight into 6-well culture plates (Costar). 2 µg of wild-type alpha V or chimeric alpha V/alpha 5 DNA/well was used to transfect the cells using LipofectAMINE PLUS reagent (Life Sciences) according to the manufacturer's instructions. 24 h post-transfection, cells were removed from the wells using Hank's balanced salt solution containing 5 mM EDTA and tested for transient expression of transfected integrin subunits by flow cytometry. 48 h post-transfection, cells were passaged into 75-cm2 flasks (Costar) and the medium was supplemented with 0.7 mg/ml G418 (Life Sciences). G418-resistant colonies were harvested after 10-14 days. The cell population was incubated with mAb P3G8 or mAb11, and then with anti-mouse or anti-rat IgG-coated magnetic beads (Dako) to select for cells expressing wild-type or chimeric integrins. Cells were then cloned by limiting dilution to obtain clones with a high level of expression. Chinese hamster ovary-B2 cells transfected with wild-type human alpha 5 were a gift from Y. Takada (Scripps Research Institute, La Jolla, CA). The reactivity of cloned cells with a panel of anti-alpha 5 and anti-alpha V mAbs was assessed using flow cytometry, using rat IgG or mouse IgG as controls.

Cell Attachment Assay-- Chinese hamster ovary-B2 cells, or cells transfected with chimeric or wild-type integrins were detached using 0.05% (w/v) trypsin, 0.02% (w/v) EDTA in PBS, washed with 150 mM NaCl, 25 mM HEPES, pH 7.4, 1 mg/ml BSA, resuspended in the same buffer with 1 mM MgCl2 and 1 mM CaCl2 (buffer A) to a concentration of 5 × 105/ml, and incubated at 37 °C for 20 min. For experiments examining the effect of anti-alpha 5 or anti-alpha V mAbs on cell attachment, cells were preincubated with mAbs (10-50 µg/ml) at 37 °C for 20 min. Assays were performed in 96-well microtiter plates (Costar, High Wycombe, UK). Wells were coated for 60 min at room temperature with 100-µl aliquots of ligands diluted with Dulbecco's PBS. Sites on the plastic for nonspecific cell adhesion were then blocked for 40-60 min with 100 µl of 10 mg/ml heat-denatured BSA. The BSA was removed by aspiration and the wells were washed once with buffer A. 100-µl aliquots of the cells were then added to the wells and incubated for 25-30 min at 37 °C in a humidified atmosphere of 5% (v/v) CO2. To estimate the reference value for 100% attachment, cells in quadruplicate wells coated with poly-L-lysine (Sigma) (500 µg/ml) were fixed immediately by direct addition of 100 µl of 5% (w/v) glutaraldehyde for 30 min at room temperature. Loosely adherent or unbound cells from experimental wells were removed by aspiration, the wells washed once with 200 µl of buffer A, and the remaining bound cells were fixed as described above for reference wells. The fixative was aspirated, the wells were washed twice with 200 µl of PBS, and attached cells were stained with Crystal Violet (Sigma) as described previously (51). The absorbance of each well at 570 nm was then measured using a multiscan enzyme-linked immunosorbent assay reader (Dynatech). Each sample was assayed in quadruplicate, and attachment to BSA (<2% of the total) was subtracted from all measurements. Each experiment shown is representative of at least three separate experiments.

    RESULTS
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

The First Three NH2-terminal repeats of the alpha  Subunit Determine the Specificity of Ligand Recognition-- To identify the regions of the alpha 5 subunit that determine the ligand binding specificity of alpha 5beta 1, chimeric alpha V/alpha 5 subunits were generated in which segments of alpha V were removed and replaced with the corresponding homologous region of alpha 5. Previous studies have suggested that sites important for ligand recognition by alpha 5 lie in either NH2-terminal repeats 1-3 (35, 36) or in the divalent cation binding repeats 4-7 (29). Therefore, initially two chimeras were constructed. The first, alpha V/alpha 5(F1-G232),2 contained repeats 1-3 of alpha 5 with the remainder of the subunit being alpha V. The second chimera, alpha 5/alpha V(F1-G223), was complementary to the first in that it contained repeats 1-3 of alpha V with the remainder of the subunit having the sequence of alpha 5 (Fig. 1). Note that the alpha V/alpha 5(F1-G232) chimera contains the divalent cation binding sites of alpha V (in repeats 4-7), while the alpha 5/alpha V(F1-G223) chimera contains the divalent cation-binding sites of alpha 5.


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Fig. 1.   Schematic representation of integrin alpha V/alpha 5 chimeras. The seven NH2-terminal repeats are represented by squares, with the connecting loops represented by short rectangles. The COOH-terminal portion of each subunit is represented by a long rectangle. Chimeras consist of a backbone of alpha V (filled squares and rectangles) or alpha 5 (open squares and rectangles) from which regions have been replaced with the homologous region from the other subunit. In this paper we use the term "repeat" in the sense of structural repeat, each repeat corresponding to one "blade" of the beta -propeller. The structural repeats are offset relative to the sequence repeats, with the first 14-amino acid residues forming the last part of the seventh structural repeat (11). Not drawn to scale.

Chimeric and wild-type subunits were expressed on the surface of alpha 5-deficient Chinese hamster ovary cells (B2 variant, Ref. 50). Stably transfected cell lines were obtained by G418 selection and dilution cloning. Using immunoprecipitation of cell lysates (not shown) each wild-type or chimeric alpha  subunit was found to be associated with a ~130-kDa beta  subunit, which is the expected size for hamster beta 1. Since beta 3 is not expressed by Chinese hamster ovary cells (52), and no beta 5 or beta 6 (molecular mass ~90 kDa) was found in association with the alpha  subunits, we concluded that the alpha  subunits formed heterodimers solely with hamster beta 1. In agreement with the findings of Takagi and co-workers (53) we found low levels of endogenous alpha Vbeta 5 on the Chinese hamster ovary-B2 cells. However, this endogenous receptor mainly recognizes vitronectin, and untransfected cells showed only very low levels of attachment to the ligands used in the current study (see legends to Figs. 2-4).


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Fig. 2.   Attachment of cells expressing wild-type or chimeric alpha V/alpha 5 to recombinant fibronectin fragments. Attachment of CHO-B2 cells expressing alpha V/alpha 5(F1-G232) (A), alpha 5/alpha V(F1-G223) (B), wild-type alpha 5 (C), or wild-type alpha V (D) to III6-10 (), III6-10(SPSDN) (open circle ), or III6-10KGE (black-square). For cells expressing alpha 5/alpha V(F1-G223) and wild-type alpha V, III6-10 was 3-10 times more potent than III6-10(SPSDN) for promoting half-maximal cell attachment; for cells expressing alpha V/alpha 5(F1-G232) and wild-type alpha 5, III6-10 was >100 times more potent than III6-10(SPSDN) for promoting half-maximal cell attachment. Untransfected cells showed little or no attachment to these proteins (<10% at the highest coating concentration, data not shown). The attachment of cells expressing alpha V/alpha 5(F1-G232) or wild-type alpha 5 was inhibited >90% by the anti-alpha 5 mAb 16; the attachment of cells expressing alpha 5/alpha V(F1-G223) or wild-type alpha V was inhibited >80% by the anti-alpha V mAb 17E6 (data not shown). Chimeric or wild-type subunits were expressed at comparable levels (mean fluorescence intensity values using P3G8 or mAb 11: 45.8, 63.6, 130.6, and 61.8 for alpha V/alpha 5(F1-G232), alpha 5/alpha V(F1-G223), wild-type alpha 5, and wild-type alpha V, respectively.


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Fig. 3.   Attachment of cells expressing wild-type or chimeric alpha V/alpha 5 to cyclic RGD peptides. Attachment of CHO-B2 cells expressing alpha V/alpha 5(F1-G232) (A), alpha 5/alpha V(F1-G223) (B), wild-type alpha 5 (C), or wild-type alpha V (D) to *CRGDGWC*-IgG conjugate () or *CRGDGRC*-IgG conjugate (open circle ). Untransfected cells showed little or no attachment to either conjugate (<10% at the highest coating concentration). The attachment of cells expressing alpha V/alpha 5(F1-G232) or wild-type alpha 5 was inhibited >90% by the anti-alpha 5 mAb 16; the attachment of cells expressing alpha 5/alpha V(F1-G223) or wild-type alpha V was inhibited >80% by the anti-alpha V mAb 17E6 (data not shown).


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Fig. 4.   Attachment of cells expressing wild-type or chimeric alpha V/alpha 5 to *CRRETAWAC*. Attachment of CHO-B2 cells expressing alpha V/alpha 5(F1-G232) (A), alpha 5/alpha V(F1-G223) (B), wild-type alpha 5 (C), or wild-type alpha V (D) to *CRRETAWAC*-IgG conjugate. Untransfected cells showed little or no attachment to this conjugate (<2% at the highest coating concentration). The attachment of cells expressing alpha V/alpha 5(F1-G232) or wild-type alpha 5 was inhibited >90% by the anti-alpha 5 mAb 16 (data not shown).

Three different tests of ligand recognition specificity were used. (i) The dependence of integrin-fibronectin binding on the presence of the synergy region was examined by comparing the level of cell attachment to a wild-type recombinant fragment of the CCBD (III6-10) with the level of attachment to the same fragment in which the synergy region is replaced by the corresponding inactive region of the eighth type III repeat (III6-10(SPSDN)) (49). A recombinant CCBD fragment in which the RGD sequence is mutated to the inactive Lys-Gly-Glu (III6-10KGE) was used as a negative control (5). (ii) To test for specific recognition of the RGDGW sequence the levels of cell attachment to the cyclic RGD peptides ACRGDGWCG (*CRGDGWC*) and ACRGDGRCG (*CRGDGRC*) were compared. (iii) To assay for recognition of the RRETAWA sequence the ability of cells to attach to the cyclic peptide GACRRETAWACGA (*CRRETAWAC*) was examined. Peptides were coupled to a carrier protein (rabbit IgG) for use in these experiments. In each case, cells expressing similar levels of wild-type alpha 5 or alpha V were analyzed in parallel. In addition, to demonstrate that cell attachment was integrin-mediated, the ability of function-blocking anti-alpha 5 or anti-alpha V mAbs to perturb cell attachment was examined.

The results (Figs. 2-4) showed that cells expressing the alpha V/alpha 5(F1-G232) chimera exhibited a strong dependence on the presence of the synergy site for adhering to fibronectin, similar to that observed for cells expressing wild-type alpha 5. Cells expressing alpha V/alpha 5(F1-G232) showed much higher levels of attachment to the *CRGDGWC* sequence than to *CRGDGRC*, and gained the ability to attach to *CRRETAWAC*, similar to the results obtained with cells expressing wild-type alpha 5. In contrast, cells expressing alpha 5/alpha V(F1-G223) showed only a weak dependence on the presence of the synergy region for attaching to fibronectin, comparable to that observed for cells expressing wild-type alpha V. Cells expressing this chimera showed approximately equal levels of attachment to *CRGDGWC* and *CRGDGRC*, and lacked the ability to attach to *CRRETAWAC*, similar to the results obtained for cells expressing wild-type alpha V.

In summary, the results showed that alpha V/alpha 5(F1-G232)beta 1 had the same ligand-binding specificity as alpha 5beta 1, while alpha 5/alpha V(F1-G223)beta 1 had the same ligand binding specificity as alpha Vbeta 1. Hence, ligand binding specificity appears to be determined by sequences within the first three NH2-terminal repeats of the alpha  subunit. Since the alpha V/alpha 5(F1-G232) chimera contains the divalent cation-binding sites of alpha V (in repeats 4-7), and the alpha 5/alpha V(F1-G223) chimera contains the divalent cation-binding sites of alpha 5, it can be concluded that the divalent cation-binding sites do not play a role in determining the ligand binding specificity.

Cells expressing chimeric or wild-type subunits were analyzed for expression of the epitopes of anti-alpha 5 and anti-alpha V mAbs using flow cytometry (Table I). The results showed that the alpha V/alpha 5(F1-G232) subunit contained the epitopes of the function-blocking anti-alpha 5 mAbs JBS5, SAM-1, SAM-2, 16, and P1D6, lacked the epitopes of function-blocking alpha V mAbs, but expressed the epitopes of the non-function blocking anti-alpha V mAbs P3G8 and LM142. Conversely, the alpha 5/alpha V(F1-G223) subunit contained the epitopes of the function blocking anti-alpha V mAbs 14D9.F8, 17E6, and 69.6.5, lacked the epitopes of function blocking alpha 5 mAbs, but expressed the epitopes of the non-function blocking anti-alpha 5 mAbs 11 and VC5. These results show that the epitopes of function blocking mAbs anti-alpha 5 mAbs lie within the first three NH2-terminal repeats of alpha 5; similarly the epitopes of function blocking anti-alpha V mAbs lie within repeats 1-3 of alpha V. In contrast, the epitopes of non-function blocking mAbs lie outside the first three repeats. Because the level of epitope expression was similar to that of wild-type alpha V or wild-type alpha 5 subunits, it is likely that the chimeras were folded correctly.

                              
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Table I
Summary of mAb reactivity with alpha V/alpha 5 chimeras
CHO-B2 cells stably transfected with the indicated wild-type or chimeric alpha  subunit were analyzed for reactivity with anti-alpha 5 and anti-alpha V mAbs by flow cytometry.

Identification of a Minimal Region of the alpha 5 Subunit That Confers Ligand Binding Specificity-- Since cells expressing the alpha V/alpha 5(F1-G232) chimera had the same ligand binding properties as cells expressing wild-type alpha 5, we attempted to narrow down the region of alpha 5 required to switch ligand binding specificity by constructing alpha V/alpha 5 chimeras containing smaller segments of alpha 5 (see Fig. 1). A chimera alpha V/alpha 5(A107-G232), which contains essentially the second and third repeats of alpha 5, was expressed at high levels. FACS analysis with a panel of anti-alpha 5 or anti-alpha V mAbs showed that the alpha V/alpha 5(A107-G232) chimera retained the epitopes of all the function blocking anti-alpha 5 mAbs tested (Table I), although the binding of JBS5 was decreased compared with the alpha V/alpha 5(F1-G232) chimera. Chimeras containing only the second or third repeat of alpha 5 (alpha V/alpha 5 (A107-C164) and alpha V/alpha 5(C164-G232)) were expressed at lower levels than alpha V/alpha 5(A107-G232), and failed to react, or reacted only weakly, with function blocking anti-alpha 5 and alpha V mAbs (data not shown). Since it could not be demonstrated that these two chimeras were folded correctly, they were not studied further.

Cells expressing the alpha V/alpha 5(A107-G232) chimera were tested for their ability to attach to alpha 5beta 1- or alpha Vbeta 1-selective ligands (Fig. 5). The results showed that cells expressing alpha V/alpha 5(A107-G232) showed a strong dependence on the synergy region for binding to the CCBD of fibronectin, displayed preferential recognition of RGDGW over RGDGR, and possessed the ability to attach to RRETAWA. Therefore, amino acid residues 107-232 of alpha 5 were found to be sufficient to confer on alpha Vbeta 1 the ligand binding specificity of alpha 5beta 1. In addition, since the amino acid sequence Asp227-Gly232 of alpha 5 is identical to the corresponding sequence Asp218-Gly223 in alpha V, residues that confer ligand binding specificity must be contained within Ala107-Trp226 of alpha 5.


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Fig. 5.   Attachment of CHO-B2 cells expressing alpha V/alpha 5(A107-G232) to recombinant fibronectin fragments or peptide-IgG conjugates. A, cell attachment to III6-10 (), III6-10(SPSDN) (open circle ), or III6-10KGE (black-square). B, cell attachment to *CRGDGWC*-IgG conjugate (), *CRGDGRC*-IgG conjugate (open circle ). C, cell attachment to *CRRETAWAC*-IgG conjugate. The attachment of cells to each substrate was inhibited >90% by the anti-alpha 5 mAb 16 (data not shown). alpha V/alpha 5(A107-G232) was expressed at a level similar to that of alpha V/alpha 5(F1-G232) (mean fluorescence intensity using P3G8: 65.9).

Identification of a Putative Loop Region of alpha 5 That Determines Specificity for RGDGW and RRETAWA-- To further narrow down the amino acid residues required to confer on alpha Vbeta 1 the ligand-binding properties alpha 5beta 1, we identified differences in sequence between the Ala107-Trp226 region of alpha 5 and the corresponding region in alpha V (Fig. 6). Interestingly, many of these sequence differences were observed to occur within putative loop regions, and were confined mainly to the central portions of these loops. Previous data has suggested that loop regions linking beta -strands 2 and 3 in each repeat (2-3 loops) and beta  strands 4 and 1 between repeats (4-1 loops) are important for ligand recognition by alpha 5beta 1 (5, 35, 36). Hence, using oligonucleotide-directed mutagenesis, we made alpha V/alpha 5 chimeras containing the following exchanges: Met118-Glu123 of alpha V with Lys125-Asp130 of alpha 5 (alpha V/alpha 5(K125-D130)), Gln145-Asp150 of alpha V with Asp154-Ala159 of alpha 5 (alpha V/alpha 5(D154-A159)), Phe177-Tyr178 of alpha V with Tyr186-Phe187 of alpha 5 (alpha V/alpha 5(Y186-F187)), and Ala209-Phe217 of alpha V with Gln218-Tyr226 of alpha 5 (alpha V/alpha 5(Q218-Y226)). We also made a chimera in which both Phe177-Tyr178, and Ala209-Phe217 of alpha V were exchanged with Tyr186-Phe187 and Gln218-Tyr226 of alpha 5, respectively (alpha V/alpha 5(F186-Y187, Q218-Y226)). All "loop swapping" chimeras expressed successfully, with the exception of alpha V/alpha 5(Y186-F187). This latter chimera was expressed only at very low levels, and may therefore have been misfolded. The other chimeras were examined for their reactivity with anti-alpha V mAbs (Table II). All chimeras expressed the epitopes of the non-function blocking mAbs P3G8 and LM142, and the epitopes of the function blocking mAbs 17E6 and 14D9.F8. However, both alpha V/alpha 5(K125-D130) and alpha V/alpha 5(D154-A159) chimeras lacked the epitope of the function-blocking mAb 69.6.5. 


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Fig. 6.   Alignment of human alpha 5 and alpha V sequences for NH2-terminal repeats 2-4 (R2-R4). Sequences were aligned using Clustal W. Predicted beta -strands in alpha 5 and alpha V are underlined, and the sequence Ala107-Tyr226 of alpha 5 is shown in bold. Residues in putative loop regions of alpha V between the second and third beta -strands, and between the fourth and first beta -strands (shown boxed) were chosen for swapping with the corresponding residues in alpha 5. Assignment of beta -strands and loops is based on an alignment of the sequence of human alpha 5 with that of human alpha 4 by Irie et al. (6).

                              
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Table II
Summary of mAb reactivity of alpha V/alpha 5 loop swapping chimeras
CHO-B2 cells stably transfected with the chimeric subunit were analyzed for reactivity with anti-alpha V mAbs by flow cytometry. None of the loop swapping chimeras reacted with function-blocking anti-alpha 5 mAbs (data not shown).

Cells expressing the loop swapping chimeras were tested for their ability to attach to alpha 5beta 1- or alpha Vbeta 1-selective ligands. Cells expressing each chimera showed only a weak dependence on the presence of the synergy region for attaching to fibronectin, similar to that observed for cells expressing wild-type alpha V (Fig. 7, compare Fig. 2D). Hence none of the loop swaps signficantly affected recognition of the synergy sequence. Cells expressing the alpha V/alpha 5(K125-D130) and alpha V/alpha 5(Q218-Y226) chimeras showed approximately equal levels of adhesion to *CRGDGWC* and *CRGDGRC*, and failed to attach to *CRRETAWAC*, again similar to the results for cells expressing wild-type alpha V (Figs. 8 and 9 panels A and C, compare Figs. 3D and 4D). Cells expressing alpha V/alpha 5(Y186-F187, Q218-Y226) showed slight selectivity for *CRGDGWC* over *CRGDGRC* but failed to attach to *CRRETAWAC* (Figs. 8D and 9D). In striking contrast, cells expressing the alpha V/alpha 5(D154-A159) chimera showed strong selectivity for *CRGDGWC*, and possessed the ability to attach to *CRRETAWAC*, identical to the results for cells expressing wild-type alpha 5 (Figs. 8B and 9B, compare Figs. 3C and 4C). Therefore, these results showed that replacing Gln145-Asp150 of alpha V with Asp154-Ala159 of alpha 5 conferred on alpha Vbeta 1 two of the ligand binding properties of alpha 5beta 1: selectivity for the RGDGW sequence and the ability to recognize RRETAWA.


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Fig. 7.   Effect of alpha V loop swapping mutations on cell attachment to recombinant fibronectin fragments. Attachment of Chinese hamster ovary-B2 cells expressing alpha V/alpha 5(K125-D130) (A), alpha V/alpha 5(D154-A159) (B), alpha V/alpha 5(Q218-Y226) (C), or alpha V/alpha 5(Y186-F187, Q218-Y226) (D) to III6-10 (), III6-10(SPSDN) (open circle ), or III6-10KGE (black-square). For each cell line, attachment was inhibited >70% by the anti-alpha V mAb 17E6 (data not shown). Chimeras were expressed at comparable levels (mean fluorescence intensity values using P3G8: 67.4, 65.7, 71.7, and 43.7 for alpha V/alpha 5(K125-D130), alpha V/alpha 5(D154-A159), alpha V/alpha 5(Q218-Y226), and alpha V/alpha 5(Y186-F187, Q218-Y226), respectively.


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Fig. 8.   Effect of alpha V loop swapping mutations on cell attachment to cyclic RGD peptides. Attachment of Chinese hamster ovary-B2 cells expressing alpha V/alpha 5(K125-D130) (A), alpha V/alpha 5(D154-A159) (B), alpha V/alpha 5(Q218-Y226) (C), or alpha V/alpha 5(Y186-F187, Q218-Y226) (D) to *CRGDGWC*-IgG conjugate () or *CRGDGRC*-IgG conjugate (open circle ). In each case, cell attachment was inhibited >70% by the anti-alpha V mAb 17E6 (data not shown).


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Fig. 9.   Effect of alpha V loop swapping mutations on cell attachment to *CRRETAWAC*. Attachment of Chinese hamster ovary-B2 cells expressing alpha V/alpha 5(K125-D130) (A), alpha V/alpha 5(D154-A159) (B), alpha V/alpha 5(Q218-Y226) (C), or alpha V/alpha 5(Y186-F187, Q218-Y226) (D) to *CRRETAWAC*-IgG conjugate. The attachment of cells expressing alpha V/alpha 5(D154-A159) was inhibited >90% by the anti-alpha V mAb 17E6 (data not shown).


    DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

In this report we have sought to identify the regions of the integrin alpha  subunit that are involved in ligand recognition using alpha V/alpha 5 chimeras. Our major findings are as follows: (i) the first three NH2-terminal repeats contain the epitopes of function blocking anti-alpha subunit mAbs and the amino acid sequences that determine ligand binding specificity; (ii) the divalent cation-binding sites (in repeats 4-7) do not determine the specificity of ligand recognition; (iii) the amino acid sequence Ala107-Trp226 of alpha 5 (corresponding approximately to the second and third repeats) is sufficient to confer on alpha Vbeta 1 the ligand binding properties of alpha 5beta 1; (iv) swapping a 6-amino acid sequence from a predicted loop region of alpha V with the corresponding region of alpha 5 (Asp154-Ala159) is sufficient to confer on alpha Vbeta 1 selectivity for RGDGW and recognition of RRETAWA.

In this study we observed a close correspondence between the regions of the alpha  subunit involved in determining the specificity of ligand recognition and those that contained the epitopes of function blocking mAbs. This finding supports previous evidence that the epitopes of function blocking mAbs are proximal to sites involved in ligand binding (5, 33-36, 54). In addition, these data lend strong support to the beta -propeller model, which predicts that the ligand-binding sites lie on the upper face of the beta -propeller (11). Recently, we have mapped some of the residues that form part of the JBS5, mAb 16, and P1D6 epitopes by substituting residues in human alpha 5 with the corresponding residues from mouse alpha 5. Ser85 was found to contribute to the JBS5 epitope, Glu126 and Leu128 to the mAb 16 epitope, and Leu212 to the P1D6 epitope (8). All these residues are predicted to lie on the upper face of the beta -propeller domain. The results of the present study, including decreased binding of JBS5 to the alpha V/alpha 5(A107-G232) chimera, are in good agreement with these data.

Two loop swapping mutants, alpha V/alpha 5(K125-D130) and alpha V/alpha 5(D154-A159), failed to react with the function blocking anti-alpha V mAb 69.6.5. However, since they did react with two other function blocking anti-