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J Biol Chem, Vol. 275, Issue 3, 1673-1678, January 21, 2000
From The Alzheimer The amyloid deposits in brain vasculature and parenchyma that are
the main histopathological hallmarks of Alzheimer's disease (1) are
composed of large polymers of Alzheimer The amyloid deposits are formed by the aggregation of individual
monomers of A Soluble A It has also been proposed that charged molecules, such as gangliosides
(8) and metal ions, including Zn2+and Cu2+ (9),
may enhance formation of amyloid in vitro and in
vivo. Apolipoprotein E4, a well established risk factor for
Alzheimer's disease (10) has also been suggested to enhance amyloid
formation by serving as a "pathological chaperone" (11-13). In the
case of apolipoprotein E, there are conflicting data suggesting that
the protein can enhance as well as inhibit amyloidogenesis (14, 15).
The existence of putative co-factors capable of enhancing amyloid
formation potentially offers new targets for pharmaceuticals for use in
the treatment of amyloid disorders. However, so far very little is
known about how such compounds might work, and it is therefore
difficult to develop assays for finding candidate pharmaceuticals and
to predict their molecular mode of action.
A number of molecules which function as amyloid ligands have been
described. These include the textile dyes Congo red and thioflavine T
that bind to amyloid fibrils but not to nonpolymerized peptide. These
compounds, therefore, have found widespread use in histopathological
diagnosis of amyloid disorders. The elements in the amyloid fibril that
these compounds bind to are probably the novel surfaces or binding
pockets generated as a result of amyloid peptide polymerization (16).
In addition to these small organic molecules there are also
peptide-based ligands. The rationale behind such ligands is that during
polymerization short stretches of amino acid residues interact and form
Here, we first investigated if nonpeptidic, synthetic molecules of low
molecular weight can have similar effects as the larger natural
substances described above. By having access to molecules that easily
can be altered structurally, the mechanism through which small
molecules regulate the higher order structure of the A Materials--
Synthetic A Analysis of A Fluorescence Equilibrium Binding--
In these experiments, the
test compounds (0.5 µM) were incubated in white 96-well
plates in the presence of polymerized A Western Blot Assay--
For aggregation analysis of
A RO-47-1816/001 Binds to A RO-47-1816/001 Enhances Binding of Soluble A
By coating the plates with A
It has previously been demonstrated that at least a fraction of
polymeric A
In a similar experiment, nonlabeled A
Finally, we also studied if addition of RO-47-1816/001 affected the
morphology of fibrils formed by nonlabeled A RO-47-1816/001 Increases the Rate of A RO-47-1816/001 Enhances Binding of Soluble Prion Protein Fragment
to Immobilized Polymers--
Here, the specificity of the compound for
A A
When tested in the A Congo Red Inhibits the Effect of RO-47-1816/001--
Congo red is
an amyloid ligand that changes its spectral properties upon binding to
amyloid fibrils and therefore is a useful tool in histochemical
diagnosis of Alzheimer's disease and other amyloid disorders (6). It
has previously been shown to interact with the central core region of
A
Fig. 7 shows the effect of Congo red on
the binding of biotin-A Here it has been shown that RO-47-1816/001, a synthetic compound
with a molecular mass of 592 Da accelerates polymerization of amyloid
peptides several times its own size. There are only a few known
examples of small molecule compounds regulating the state of
polymerization of proteins. The most well known compounds of this class
are probably colchicine and paclitaxel (previously taxol), that induce
disassembly and assembly, respectively, of microtubuli and are used
clinically to treat gout and neoplasms (34).
Binding studies showed that RO-47-1816/001 displayed affinity both to
A It was interesting to observe that analogues of the amyloid ligand
RO-47-1816/001 failed to produce an accelerating effect on
amyloid formation despite having similar affinities to A There are also examples of natural compounds being used as
pharmaceuticals that employ this strategy in mediating their specific action. Cyclosporin A and FK506 both inhibit calcineurin by forming a
complex with cyclophilin and FK506-binding protein, respectively, that
display high affinity toward the phosphatase (39, 40). Recently, this
mechanism was elegantly used to increase the affinity of a bifunctional
ligand designed to induce heterodimerization of the FK506-binding
protein and an SH2 domain (41).
It is not clear if the ability to enhance polymerization of amyloid
peptides is a common feature in small organic molecules or if it is
restricted to a very small number of substances. We do, however, want
to point to the possibility that clinically used pharmaceuticals may
have this property and, at least theoretically, may promote
amyloidogenesis in vivo.
It can be speculated that the present results suggest that the brain
might contain small endogenous compounds having similar effects as
RO-47-1816/001. Apolipoprotein E (apoE) and gangliosides have been
mentioned previously, but it is still possible that there are other
natural compounds with similar effects. An interesting observation by
Selkoe and co-workers (42) is that Congo red stabilizes monomeric A We thank Dr. Patrick Nef for valuable
suggestions during preparation of the manuscript.
*
This work was supported by F. Hoffmann-La Roche AG, The
Swedish Medical Research Council, and the Swedish Foundation for
Strategic Research.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
The abbreviations used are:
A
Controlling Polymerization of
-Amyloid and Prion-derived
Peptides with Synthetic Small Molecule Ligands*
,
,
,
,
,
,
tne
,
, and
F. Hoffmann-La Roche AG, Pharma Division,
Preclinical Research, CH-4070 Basel, Switzerland, the
§ Laboratory of Biochemistry and Molecular Pharmacology,
Section of Drug Dependence Research, Department of Clinical
Neuroscience, Karolinska Hospital, S-171 77 Stockholm, Sweden, and the
¶ Department of Clinical Neuroscience, Occupational Therapy, and
Elderly Care Research, Karolinska Institute, KFC Novum plan 4, S-141
86 Huddinge, Sweden
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-amyloid peptide (A
) and a
fragment of the prion protein have the capacity of forming amyloid-like
fibrils when incubated under physiological conditions in
vitro. Here we show that a small amyloid ligand, RO-47-1816/001,
enhances this process severalfold by binding to amyloid molecules and
apparently promote formation of the peptide-to-peptide bonds that join
the monomers of the amyloid fibrils. This effect could be antagonized by other ligands, including analogues of RO-47-1816/001, as well as the
structurally unrelated ligand Congo red. Analogues of RO-47-1816/001 with low affinity for amyloid did not display any antagonistic effect.
In conclusion, these data suggest that synthetic molecules, and
possibly also small natural substances present in the brain, may act in
a chaperone-like fashion, promoting A
polymerization and growth of
amyloid fibrils in vitro and possibly also in
vivo. Furthermore, we demonstrate that small organic molecules
can be used to inhibit the action of amyloid-enhancing compounds.
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-amyloid peptide (A
).1 This peptide is
present in two major forms, one being 40 amino acids long, and the
other, more aggregable form being 42 amino acids long (2-4). The A
peptide is secreted by numerous cell types in the body but the amyloid
deposits are only present in the central nervous system.
peptide into very large polymers which have a
fibril-like appearance when observed in an electron microscope (5).
These polymers can also be observed by light microscopy following
staining with certain histological dyes such as Congo red and
thioflavine T (6).
peptide can be detected in blood and cerebrospinal fluid.
The levels are, however, very low, usually in the low nano- to
picomolar range and at these concentrations the peptide polymerizes at
a very slow rate (7). A number of recent studies on the mechanisms of
amyloid formation have conclusively shown that the presence of
preformed oligo- or polymers of the amyloid peptide in the reaction
mixture increases the polymerization rate dramatically (7). These
multimers serve as templates for the reaction and, as a result, the
initial, slow phase of primary nucleation is eliminated.
-strands that join the monomers encompassing the fibril (17-19). It
was speculated that short peptides corresponding to one of the strands
in the
-sheet can bind to the amyloid peptide/protein. With this
approach, ligands capable of interfering with amyloid formation
in vitro and possibly also in vivo have been
identified (20-23).
peptide can
be probed with a more rational, structure based, approach than
otherwise. Moreover, small synthetic molecules with pharmacokinetic and
toxicological properties allowing them to be easily administered to
animals, may also be useful in studies of amyloidogenesis in
vivo.
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EXPERIMENTAL PROCEDURES
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
1-40,
A
1-42, and PrP106-126 biotinylated at the
N terminus were obtained from ANAWA (Wangen, Switzerland). Nonlabeled
A
1-40, A
1-42, and
PrP106-126 were obtained from Bachem (Bubendorf,
Switzerland). The peptides were stored in dimethyl sulfoxide
(Me2SO) at
20 °C. Human serum albumin, fatty
acid-free, 99% purity, was from Sigma. Streptavidin-peroxidase was
bought from Roche Molecular Biochemicals (Mannheim, Germany). Antibody
6E10 was bought from Senetek PLC. All other reagents were from Sigma.
Peptide Polymerization--
This assay was
carried out essentially as described previously (24). Briefly, 96-well
plates (Maxisorp, Nunc) were coated with peptide by incubating them
with a solution of A
1-42 or A
1-40 (2.5 µM) in Tris-buffered saline (50 mM
Tris/HCl, pH 7.4, 150 mM NaCl, and 0.05%
NaN3). To each well, 100 µl of the solution was added,
and the plates were incubated at 37 °C with shaking for 48 h.
The peptide solution was then decanted. Staining with a solution of
Congo red showed that the polymeric peptide had bound to the wells.
After removal of the nonbound peptide, the plates were allowed to dry.
Coated plates were stored at
20 °C in a desiccator until used. On
the day of experiment, the plates were blocked by addition of 300 µl
of PBS containing 0.05% (v/v) Tween 20 (PBS-T) and 1% bovine serum
albumin/well for 2 h at room temperature. The plates were then
washed with PBS-T, and the fluid was decanted.
Biotin-A
1-40 or biotin-A
1-42 was
dissolved in Me2SO and diluted in Tris-buffered saline with NaN3 (0.05%) to a final concentration of 20 nM. The plates were incubated 3 h, unless stated
otherwise, at 37 °C with shaking. Nonbound peptide was removed by
washing the plates three times with PBS-T (300 µl/well).
Streptavidin-peroxidase was diluted with PBS-T containing 1% bovine
serum albumin and added to the plates (200 µl/well). After incubation
(30 min at room temperature) the solution was flicked off, and the
plates were washed four times with PBS-T. Tetramethylbenzidine was used
as chromogenic substrate for the peroxidase. After termination of the
reaction with sulfuric acid (0.33 M), absorbance was
measured at 455 nm using a SpectraMAX 250, 96-well plate reader.
Nonspecific binding is defined as binding of biotin-A
to wells that
had not been coated with A
. There was a linear relationship between
peroxidase activity and the amount of peptide bound (data not shown).
Nonspecific binding was, on average, approximately 15% of total
binding (data not shown).
1-42 or
Prp106-126 at concentrations of 123, 61.5, 30.8, 15.4, 7.7, 3.8, 1.9, or 0 µM (in quadruplicate) for
approximately 10 min at room temperature with agitation. Fluorescence
was measured in a Perkin-Elmer LS-50-B equipped with a well-plate
reader at the following emission and excitation wavelengths (nm).
RO-47-1816/001: 410, 510; RO-65-8564/001: 410, 510; RO-65-7560/000:
415, 500; RO-65-8815/001; 410, 480; RO-65-3537/000: 410, 480;
RO-65-5780/000: 380, 440. As presented in Fig. 1C,
F0 represents fluorescence of the compound
alone, F is the observed fluorescence,
F
is the maximal fluorescence (i.e. fluorescence in the presence of the highest
concentration of peptide used), and L is the concentration
of the peptide.
1-40 monomers, 20 µM
A
1-40 were co-incubated with the indicated
concentrations of RO-47-1816/001 for 19 h at 37 °C. After
incubation, samples were mixed with NuPAGE LDS sample buffer (4 ×)
from Novex (San Diego, CA) and boiled for 5 min. Samples, 30 µl/lane,
were loaded on Novex 4-12% BisTris PAGE gel, separated, and blotted
on polyvinylidene difluoride membranes (Novex, San Diego, CA).
Membranes were washed once with PBS-T blocked with 5% (w/v) nonfat
milk in PBS-T for 1 h, washed again three times with PBS-T, and
probed with 6E10 IgG from Senetek PLC (1 µg/ml in PBS-T with nonfat
milk) for 1 h at room temperature. Membranes were washed again
three times with PBS-T followed by a 30-min incubation of a second
antibody linked to horseradish peroxidase (Amersham Pharmacia Biotech,
Little Chalfont, UK, 1:25.000 dilution). Bands were detected using
Lumi-LightTM (Roche Molecular Biochemicals, Mannheim,
Germany) and Hyperfilms (Pharmacia Amersham Biochem).
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RESULTS
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-amyloid--
RO-47-1816/001, a
compound of the pyridone class (Fig.
1A), was identified through
random screening of a large library of small organic molecules.
Equilibrium fluorescence binding (25) demonstrated that this compound
bound to A
1-42 fibrils (Fig. 1B) with a
Kd of approximately 6.2 µM (Fig.
1C). In the same type of experiments it could also be shown that the compound binds to A
1-40 with a similar
affinity (data not shown).

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Fig. 1.
The structures of compounds used in the study
and binding of RO-47-1816/001 to
A
1-42 polymers.
A, the structures of compounds used in the study.
B, emission spectra of RO-47-1816/001 in the presence of
increasing concentrations of A
1-42-amyloid. The
compound was incubated at a concentration of 0.5 µM in
the presence of (from top to bottom) 123, 61.5, 30.8, 15.4, 7.7, 3.8, 1.9, or 0 µM polymerized
A
1-42 in Tris-buffered saline. Excitation wavelength
was 410 nm, and slit widths were 5 nm for both excitation end emission.
C, saturation binding (left panel) and the
corresponding Scatchard plot (right panel) of
A
1-42 to RO-47-1816/001. Measurements were performed in
quadruplicate as described under "Experimental Procedures."
to Immobilized
Polymers--
Here, an assay was employed where binding of
biotinylated A
1-40 or A
1-42 to
immobilized nonlabeled A
1-42 was used as a measure for
A
polymerization (24). When RO-47-1816/001 was added to the assay
mixture, polymerization increased severalfold (Fig.
2A). As seen in the figure,
the compound also increased binding to control wells to which no
nonlabeled peptide had been attached, but only to a small extent. A
reasonable explanation is that the test compound increased binding of
soluble biotinylated A
1-40 to the small amounts of
biotinylated A
1-40 that had been nonspecifically
absorbed to the plastic material of the wells.

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Fig. 2.
RO-47-1816/001 enhances amyloid peptide
polymerization. A, biotin-A
1-40
(circles) or biotin-A
1-42
(triangles), at a concentration of 20 nM, was
incubated in wells coated with A
1-42 (filled
symbols) or blocking buffer only (open symbols) in the
presence of the indicated concentrations of RO-47-1816/001. Following
incubation at 37 °C for 3 h, the reaction was terminated by
washing, and the plate processed as described under "Experimental
Procedures." B, RO-47-1816/001 increases the formation of
multimeric A
. A
1-40 was incubated at a concentration
of 20 µM at 37 °C for 19 h with agitation in the
presence of the indicated concentrations of RO-47-1816/001. Following
incubation, the peptide mixture was separated by SDS-PAGE, and A
immunoreactivity was visualized by Western blotting using antibody
6E10.
1-40, instead of
A
1-42 polymers, and studying binding of
biotin-A
1-40, virtually identical results were obtained
(data not shown). This demonstrates that the two C-terminal residues of
A
1-42 are not required for the effect of
RO-47-1816/001. The results also show that the compound requires
immobilized polymers for its effect in the assay and that the increase
in biotin signal reflects enhanced incorporation of soluble peptide
into the immobilized polymers. We also studied how addition of
RO-47-1816/001 affected the resistance of the polymers to trypsin (26)
and to solubilization with high concentrations of urea. Addition of 30 µM RO-47-1816/001 did not have any significant effect on
these parameters, suggesting that polymers formed in the presence of
the compound had a similar or identical sensitivity toward the protease
and chaotrope solubilization. Because the amyloid formed in the
presence of RO-47-1816/001 shared these features of genuine amyloid
(i.e. relative resistance to proteolysis and chaotropes), it
is likely that it is very similar, or identical, to amyloid formed in
the absence of the compound.
remains associated when separated under the relative harsh denaturing conditions employed in SDS-PAGE (27). We used this
feature of the peptide to study if addition of RO-47-1816/001 to
nonlabeled A
1-40 increased formation of high molecular
weight forms of the peptide. In the absence of RO-47-1816/001,
immunoreactive bands with apparent molecular masses of approximately 4, 8 and 16 kDa, probably corresponding to A
mono-, di-, and tetramers,
respectively, were obtained (Fig. 2B). Addition of
RO-47-1816/001 increased formation of the 16-kDa form
dose-dependently and induced formation of even larger
polymers. This directly demonstrates that the compound enhances
association of A
into large multimers.
was incubated with increasing
concentrations of RO-47-1816/001. After 19 h of incubation at
37 °C, it was observed that the compound
dose-dependently increased the amount of polymerized
peptide as measured by Congo red staining (28), suggesting that the
compound had stimulated formation of fibrils fulfilling this criteria
for amyloid.
1-40 and
A
1-42. The peptides were incubated in the presence of
30 µM RO-47-1816/001 for 20 h and then subjected to
electron microscopy as described previously (24). As seen in Fig.
3, addition of the compound to the
polymerization mixture had no apparent effect on the morphology of the
fibrils (Fig. 3, compare A with B and
C with D). A reasonable interpretation of this
experiment is that RO-47-1816/001 enhances polymerization without
affecting the ultrastructural appearance of the A
fibrils.

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Fig. 3.
RO-47-1816/001 has no apparent effect on the
ultrastructural appearance of A
fibrils.
A
1-40 (A and B) and
A
1-42 (C and D) at a
concentration of 20 µM were incubated in Tris-buffered
saline for 24 h in the absence (A and C) or
presence (B and D) of 30 µM
RO-47-1816/001. After the incubation samples were negatively stained,
they were viewed in an electron microscope.
Polymerization--
The
binding of biotin-A
to immobilized polymers is
time- dependent (24, 29). We therefore decided to study
how RO-47-1816/001 affects polymerization at various time points over
an interval of 5 h. As seen in Fig.
4, incorporation of
biotin-A
1-40 was essentially linear over time in the
studied time interval in the absence of RO-47-1816/001 in agreement
with previous studies (30). Addition of the compound changed this
pattern, most notably in the presence of the highest concentration used
(50 µM) where maximal binding was observed already after
1-h incubation. A reasonable interpretation of these data is that the
compound increases the rate through which soluble peptide is
incorporated into the immobilized polymers.

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Fig. 4.
RO-47-1816/001 increases the rate of binding
of biotin-A
1-40 to immobilized
A
1-42 polymers.
Biotin-A
1-40 was incubated with 0 (filled
circle), 0.5 (open circle), 5 (filled
triangle), or 50 µM (open triangle)
RO-47-1816/001 for the indicated time periods.
-amyloid was addressed. A fragment of the prion protein
corresponding to amino acids 106-126 (PrP106-126)
spontaneously polymerizes into amyloid-like fibrils, morphologically indistinguishable from those formed by A
(31-33). First, it was studied if RO-47-1816/001 can bind to the prion fragment. As seen in
Table I, RO-47-1816/001 bound to
PrP106-126 with an affinity similar to that displayed for
A
1-42, demonstrating that RO-47-1816/001 is not a
specific A
ligand but also binds other types of amyloid. Using the
same type of assay as employed for A
, the effect of RO-47-1816/001
on PrP106-126 polymerization was investigated. In Fig.
5 is shown that the compound
dose-dependently increased biotin-PrP106-126
binding. Its potency was, however, lower here than in the A
assay
(compare Figs. 2A and 5). The conclusion is therefore that the effect of the compound is not specific for A
-amyloid and thus
can be used to enhance the polymerization of at least one other,
structurally unrelated, amyloid peptide.
Dissociation constants (Kd) for ligand-peptide combinations

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Fig. 5.
RO-47-1816/001 increases polymerization of
the prion protein-derived peptide PrP106-126.
Biotin-PrP106-126 was allowed to bind to immobilized
PrP106-126 in the presence of the indicated concentrations
of RO-47-1816/001 for 3 h. The reactions was stopped by washing
and processed as described under "Experimental Procedures."
Ligands Structurally Related to RO-47-1816/001 Can Antagonize
Its Amyloid Formation-enhancing Effect--
A selection of five
analogues of RO-47-1816/001 (Fig. 1A) were tested for their
affinity toward polymerized A
1-42 (Table I). Three of
the compounds bound to A
with an affinity similar to that of
RO-47-1816/001. The two others had low affinity for the peptide
(RO-47-3537/000 and RO-65-5780/000) with approximately 10 times higher
Kd. Clearly, the two compounds with the lowest
affinity are less lipophilic than the four with the highest affinity.
There are also other structural differences. The polymerization accelerating compound RO-47-1817/001 is an ester, all the other molecules are amides. In addition, the phenyl ring of RO-47-1816/001 is
unsubstituted, whereas the antagonists carry methoxy or benzyloxy substituents.
polymerization assay, none of the
RO-47-1816/001 variants had any clear effect on
biotin-A
1-40 binding (Fig.
6, left panel). This was
surprising considering that: (i) three out of five compounds
bound to the amyloid with an affinity in the same range as
RO-47-1816/001 and (ii) they had striking structural
similarities to RO-47-1816/001. This prompted us to investigate if the
analogues, by competing with RO-47-1816/001 binding, interfered with
its capability to enhance polymerization. As seen in Fig. 6
(right panel), three of the five tested compounds dose-dependently reduced binding of
biotin-A
1-40 in the presence of 30 µM
RO-47-1816/001. These three antagonists were the compounds displaying
the highest affinity for A
, whereas the low affinity substances
failed to antagonize the action of RO-47-1816/001 (Table I).

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Fig. 6.
Structural variants of RO-47-1816/001
antagonize its effect on A
polymerization. The effect of structural variants of
RO-47-1816/001 on the binding of 20 nM
biotin-A
1-40 to immobilized A
1-42 was
studied in the absence (left panel) or presence (right
panel) of RO-47-1816/001 at a concentration of 30 µM. The incubation was performed for 3 h.
RO-65-5780/000 (open circle), RO-65-3537/000 (filled
circle), RO-65-8815/001 (open triangle), RO-65-7560/000
(filled triangle), RO-65-8564/001 (filled
square).
as well as to regions with similar structural properties in other
amyloid-forming proteins and peptides (16). Structurally, Congo red is
very different from the hydrophobic pyridone derivatives described here
(Fig. 1A).
1-40 both in the presence and in
the absence of RO-47-1816/001. In the absence, Congo red slightly
enhanced binding at the highest concentrations employed, which is in
agreement with previous published data (29). In the presence of 10 µM RO-47-1816/001, Congo red reduced binding similar to
that of the previously analyzed RO-47-1816/001 analogues. As seen in
the figure, Congo red only reduced the effect of RO-47-1816/001 and was
not capable of reducing polymerization below that obtained in the
absence of RO-47-1816/001. At the highest concentrations used, the
level of binding was essentially identical to that in the absence of
RO-47-1816/001. This suggests that RO-47-1816/001 and Congo red
interact with A
at the same binding site.

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Fig. 7.
Congo red inhibits the action of
RO-47-1816/001 but does not affect basal binding of
biotin-A
1-40 to immobilized
A
1-42 polymers.
Biotin-A
1-40 was incubated in the presence (open
circles) or absence (filled circles) of RO-47-1816/001
(10 µM) together with the indicated concentrations of
Congo red.
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DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-amyloid as well as to amyloid formed by a peptide derived from the
prion protein (Prp106-126). This is a feature shared by
several other organic compounds, including Congo red and thioflavine T. It is believed that the novel surfaces generated as a result of the
adoption of
-pleated sheet structures during polymerization serve as
binding sites for these amyloid ligands (35). This property of the
compounds is widely used to histochemically distinguish amyloid from
normal tissue. Because Congo red could interfere with the action of
RO-47-1816/001, it is reasonable to assume that the latter interacted
with the same binding site(s) as the former and that this site(s)
therefore can be of importance for putative amyloid-enhancing compounds and their antagonists.
as the
original compound. This initially surprising finding was later explained when it was revealed that the inactive ligands instead antagonized the effect of RO-47-1816/001. The present
finding therefore suggests that RO-47-1816/001 exerts its action not
only by binding to the amyloid polymer but that it also has an
additional effect that the antagonists do not possess. It is tempting
to speculate that RO-47-1816/001, after it has bound to the amyloid fibril, binds to the soluble peptide and brings it into close proximity
to the fibril (Fig. 8), thereby
facilitating docking of the peptides via their specific binding
sequences (20, 21, 36). Whether cross-linking is mediated directly by
RO-47-1816/001 or by a composite surface of RO-47-1816/001 and the A
polymer is not clear. The latter mechanism is, however, more favored in nature. The most well known example is probably the interaction of the
T-cell receptor with its antigen. The affinity of the receptor for a
peptide antigen per se is low but when bound to and
presented by the major histocompatibility complex, the affinity
increases dramatically. Under these circumstances, the T-cell receptor
can bind both to the antigen and the major histocompatibility complex (37, 38), and the increased number of contacts leads to increased affinity.

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Fig. 8.
Proposed mechanism to explain how the amyloid
ligand RO-47-1816/001 accelerates incorporation of soluble
A
peptide into preexisting polymers.
A, soluble A
directly interacts and binds to the
immobilized polymer (indicated as a trimer in the figure). In addition
to the sites were the peptide-to-peptide interactions take place, there
is a binding site for the ligand RO-47-1816/001. After the ligand has
bound to the A
polymer, either a novel surface is formed (a
composite of the ligand and the polymer), to which the soluble peptide
can bind or alternatively, the protruding part of RO-47-1816/001
per se binds the soluble peptide and cross-links it to the
polymer. It is not clear if the ligand remains associated with the
polymer (lower part of the figure) after the soluble peptide
has bound to the polymer or if it dissociates from the peptide complex
(upper part of the figure). B, the antagonists
also bind to the polymers but fail to cross-link the polymer to the
soluble peptide. Instead it will occupy the binding site and inhibit
the binding and the effect of RO-47-1816/001 but without affecting the
direct peptide-to-peptide interaction.
in cell culture supernatant, which may suggest that compounds with
similar effects as those of RO-47-1816/001 may be secreted by cells.
Finally, the finding presented here, that some compounds, including
Congo red, displaying affinity for amyloid can antagonize the action of
amyloid enhancers, may therefore be of therapeutic significance.
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ACKNOWLEDGEMENT
![]()
FOOTNOTES
To whom correspondence should be addressed. Tel.:
41-61-688-39-31; Fax: 41-61-688-17-20; E-mail:
christer.nordstedt@roche.com.
![]()
ABBREVIATIONS
, Alzheimer
amyloid
peptide;
Prp, prion protein;
BisTris, 2[bis(2-hydroxyethyl)amino]-2-(hydroxymethyl)propane-1,3-diol;
PAGE, polyacrylamide gel electrophoresis.
![]()
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
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