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J. Biol. Chem., Vol. 275, Issue 30, 23398-23405, July 28, 2000
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From the
Received for publication, March 23, 2000, and in revised form, April 27, 2000
S-Adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine
4'-O-methyltransferase (4'-OMT) catalyzes the conversion of
3'-hydroxy-N-methylcoclaurine to reticuline, an important
intermediate in synthesizing isoquinoline alkaloids. In an earlier step
in the biosynthetic pathway to reticuline, another
O-methyltransferase,
S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase (6-OMT), catalyzes methylation
of the 6-hydroxyl group of norcoclaurine. We isolated two kinds of
cDNA clones that correspond to the internal amino acid sequences of
a 6-OMT/4'-OMT preparation from cultured Coptis japonica
cells. Heterologously expressed proteins had 6-OMT or 4'-OMT
activities, indicative that each cDNA encodes a different enzyme.
4'-OMT was purified using recombinant protein, and its enzymological
properties were characterized. It had enzymological
characteristics similar to those of 6-OMT; the active enzyme was
the dimer of the subunit, no divalent cations were required for
activity, and there was inhibition by Fe2+,
Cu2+, Co2+, Zn2+, or
Ni2+, but none by the SH reagent. 4'-OMT clearly had
different substrate specificity. It methylated
(R,S)-6-O-methylnorlaudanosoline,
as well as (R,S)-laudanosoline and
(R,S)-norlaudanosoline. Laudanosoline, an
N-methylated substrate, was a much better substrate for
4'-OMT than norlaudanosoline. 6-OMT methylated norlaudanosoline and
laudanosoline equally. Further characterization of the substrate
saturation and product inhibition kinetics indicated that 4'-OMT
follows an ordered Bi Bi mechanism, whereas 6-OMT follows a Ping-Pong Bi Bi mechanism. The molecular evolution of these two related O-methyltransferases is discussed.
Reticuline is an important intermediate in the production of
analgesic morphinan alkaloids (e.g. morphine), antimicrobial berberine alkaloids (e.g. berberine), and antimicrobial
benzophenanthridine alkaloids (e.g. sanguinarine). The
biosynthetic pathway to reticuline has been clarified, and nine enzymes
that are involved in stepwise conversion of two molecules of the
primary metabolite L-tyrosine to one molecule of reticuline
have been identified (Fig. 1) (Ref. 1
and references therein). Of the nine steps, three are methyl transfer
reactions on the OH or NH group that are catalyzed by S-adenosyl-L-methionine:norcoclaurine
6-O-methyltransferase
(6-OMT)1 (2-4);
S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase (4'-OMT) (5); and
S-adenosyl-L-methionine:coclaurine N-methyltransferase (NMT) (6, 7).
Methyltransferases are essential for directing intermediates to
specific biosynthetic pathways (8). 6-OMT catalyzes the transfer of the
S-methyl group of
S-adenosyl-L-methionine (AdoMet) to the
6-hydroxyl group of norcoclaurine to form coclaurine. This is the first
O-methylation step in the biosynthesis of benzylisoquinoline alkaloids. NMT catalyzes the N-methylation of coclaurine to
form N-methylcoclaurine, and 4'-OMT transfers the methyl
group to the 4'-hydroxyl group of
3'-hydroxy-N-methylcoclaurine to form reticuline. In
addition S-adenosyl-L-methionine:scoulerine
9-O-methyltransferase (SMT) (9-11) catalyzes the crucial
step in the conversion of scoulerine, which is derived from reticuline,
to tetrahydrocolumbamine in the berberine biosynthetic pathway (Fig.
1).
Each O-methyltransferase (OMT) in the biosynthesis of
reticuline or berberine has strict substrate specificity, despite
structural similarities of the various substrates. Because of their
importance for the production of these pharmaceutically important
alkaloids and their strict substrate recognition, these
methyltransferases, especially OMTs, have been well characterized
(2-5, 9-11). Characterizations, except for SMT, which has been
purified to homogeneity, were done, however, with highly but
incompletely purified enzymes, because of the high similarity of 4'-
and 6-OMT.
In our previous attempt to purify 6-OMT from cultured Coptis
japonica cells, two homologous 41- and 40-kDa polypeptides were isolated. Because the highly purified fraction showed both 6- and
4'-OMT activities, we speculated that these 41- and 40-kDa polypeptides
encode 6- or 4'-OMT by themselves or with the aid of a heterodimer. To
confirm whether this is so, we isolated the cDNAs corresponding to
the internal amino acids of each polypeptide then characterized the
enzyme activities using recombinant proteins heterologously expressed
in Escherichia coli. The recombinant protein expressed from
the cDNA of the 41-kDa polypeptide had 4'-OMT activity and that of
the 40-kDa one 6-OMT activity. Enzymological properties of 4'-OMT
purified without 6-OMT contamination were determined from its
recombinant protein.
Cultured Cells--
The original cultured cells were induced
from rootlets of C. japonica Makino var. dissecta (Yatabe)
Nakai. A cell line (156-1) that produces large amounts of alkaloids was
subcultured as described elsewhere (12). Fourteen-day-old cultured
cells were harvested and used for the extraction of mRNA.
Chemicals--
Berberine was purchased from Wako Pure Chemicals
(Osaka, Japan). (R,S)-Norlaudanosoline and
(R,S)-laudanosoline were from Aldrich. (R)- and
(S)-Coclaurine were the gift of Dr. N. Nagakura of Kobe
Women's College of Pharmacy. The other alkaloids used were gifts from
Mitsui Petrochemical Industries, Ltd.
Amino Acid Sequence Analysis--
6-OMT was purified from
cultured Coptis cells, after which two 41- and 40-kDa
polypeptides were isolated by reverse phase HPLC as described
previously (4). The 41-kDa polypeptide was digested with trypsin, the
40-kDa one with the lysyl endopeptidase from Achromobacter
or Staphylococcus aureus V8 protease using a
Residue-specific Protease Kit (TaKaRa). The amino acid sequences of the
peptides were determined with a protein sequencer (model 477A/120A;
Applied Biosystems).
Screening of cDNAs and Nucleotide Sequencing--
A cDNA
library of cultured Coptis cells was prepared with a
ZAP-cDNA synthesis kit and Gigapack II Gold packaging extract (Stratagene) as described elsewhere (11). The oligonucleotide probes
used to screen the cDNA library were based on the internal amino
acid sequences of the 41- and 40-kDa polypeptides. The 41-kDa probe 1, 5'-ATGGTICCIATGATHYTIGGIATGACICARAA-3', corresponded to MVPMILGMTQK and
the 41-kDa probe 2, 5'-ATHYTICAYGAYTGGAAYGA-3', to ILHDWND. The 40-kDa
probe 1, 5'-GGIACIAATATTTGGGGITATATGGC-3', corresponded to GTNIWGYMA
and the 40 kDa probe 2, 5'-TTTAATGAAGCIATGGCIAATAA-3', to FNEAMAND (in
which probes I = inosine, H = A or C or T, Y = C or T,
R = A or G). The first screening with the 41-kDa probe 1 yielded
18 positive signals, and the third screening yielded 9 independent
phages. Similarly, 70 positive signals were obtained by the first
screening with 40-kDa probe 1 and 18 independent phages by the third
screening. The cDNA inserts of the plasmid vector (pBluescript II
SK
cDNA sequences were determined with deletion clones prepared with
ExoIII and an ALF DNA sequencer (Amersham Pharmacia Biotech) and an ABI 373A DNA sequencer (Applied Biosystems) with fluorescein isothiocyanate-labeled primers.
Construction of Expression Vectors for the 41- and 40-kDa
Polypeptides--
Expression vectors for these polypeptides were
constructed without the fused peptides derived from vector sequence in
a pET-21d vector (Novagen). The 5'-fragment of the 41-kDa polypeptide
cDNA (pBS41) was amplified by PCR by use of the following primers: the forward primer
(5'-GAGAATTAACATGTCTTTCCATGG-3') was designed to introduce an AflIII site (ACPuPyGT) at the ATG start
codon and the reverse primer
(5'-TCCACCGACGTCAACAAGTGAGTC-3') to introduce an AatII site (GACGTC) with no modification of the conserved
amino acid sequence in motif A of the AdoMet-dependent
methyltransferase (13). The 3'-fragment of the 41-kDa polypeptide
cDNA was amplified by use of the M13 primer and the forward primer
5'-TCACTTGTTGACGTCGGTGGAGG-3' to introduce an
AatII site with no change in the amino acid sequence of
motif A. The full-length cDNA that encoded the 40-kDa polypeptide (pBS40) was amplified by PCR with the M13 primer and the forward primer
5'-CAGAATCATAGACATGTTAGTGAAGAAGAAGG-3' to
introduce an AflIII site at the start codon. Restriction
sites were introduced by changing the underlined bases. pET-21d was
digested with NcoI and XhoI, and the PCR products
were ligated into the vector. The expression vectors were designated
pE41 for the 41-kDa polypeptide and pE40 for the 40-kDa one. These
constructs were completely sequenced to confirm that no changes were
introduced by the subcloning process.
Heterologous Expression of the 41- and 40-kDa Polypeptides in E. coli--
The expression vector for the 41- or 40-kDa polypeptide was
introduced into E. coli BL21 (DE3). Cells were induced with
1 mM isopropylthiogalactoside, incubated at 16 °C for
24 h, then harvested and sonicated in extraction buffer (0.1 M Tris-HCl, pH 7.5, containing 10 mM ascorbate
and 20 mM 2-mercaptoethanol). The supernatant was desalted
through an NAP-5 column (Amersham Pharmacia Biotech) and used to assay
both 4'-OMT and 6-OMT activities.
Assay of Enzymatic Activity--
4'-OMT and 6-OMT activities
were detected by HPLC and liquid chromatography-mass spectroscopy
(LC-MS). Whereas
(S)-3'-hydroxy-N-methylcoclaurine and
(S)-norcoclaurine are the true intermediates in reticuline biosynthesis (3),
(R,S)-6-O-methylnorlaudanosoline
(6-OMe-NLS) and (R,S)-norlaudanosoline (NLS) were
used as the substrates for the routine assays of 4'-OMT and 6-OMT,
respectively, due to the availability of these compounds and similar
product formation in the reaction (Fig. 1) (4, 5). The standard 4'-OMT
reaction mixture consisted of 0.3 M potassium phosphate (pH
7.4), 25 mM sodium ascorbate, 1 mM 6-OMe-NLS, 1 mM AdoMet, and the enzyme preparation. The standard 6-OMT
reaction mixture consisted of 0.3 M CHES-NaOH (pH 9.0), 25 mM sodium ascorbate, 1 mM NLS, 1 mM
AdoMet, and the enzyme preparation. The assay mixture was incubated at
30 °C for 1 h, after which the reaction was terminated by the addition of methanol. After protein precipitation, the reaction product
was detected by reverse phase HPLC (mobile phase, 22% acetonitrile/H2O for the 4'-OMT assay and 18% for the
6-OMT assay containing 1% acetic acid; column, LiChrospher 100 RP-18(e) (4 × 250 mm; Cica-Merck); flow rate, 0.8 ml/min;
detection, absorbance measurement at 280 nm). Mass spectra were
obtained with an API165 (Perkin-Elmer).
To quantify the enzymatic activity of 4'-OMT, the transfer of the
3H-labeled methyl group of
S-adenosyl-L-[methyl-3H]methionine
(NEN Life Science Products) to the product was measured. Reaction
conditions have been described elsewhere (4).
Purification of 4'-OMT from E. coli Lysate--
Large scale
production of 4'-OMT was obtained with 600-ml cultures of E. coli. Purification was done at 4 °C. All the buffers used
contained 4 mM 2-mercaptoethanol and 10% glycerol. The
crude bacterial lysate was applied to a Q-Sepharose Fast Flow column (2.5 × 10 cm; Amersham Pharmacia Biotech) equilibrated with 20 mM Tris-HCl (pH 7.5). Proteins were eluted with a linear
NaCl gradient of 0-1 M in 20 mM Tris-HCl (pH
7.5) (total volume: 100 ml). Active fractions were applied to a Bio-Gel
HTP column (2.5 × 10 cm; Bio-Rad) equilibrated with 10 mM potassium phosphate (pH 7.0). Proteins were eluted with
a linear potassium phosphate gradient of 10-500 mM (total
volume: 160 ml). Major enzyme activity-containing fractions were pooled
and kept at Other Methods--
The subunit molecular mass of the enzyme was
ascertained by SDS-PAGE (10% polyacrylamide), and the molecular mass
of the native enzyme by gel filtration chromatography through a
Superose 12 column (Amersham Pharmacia Biotech) in fast protein liquid
chromatography. Protein was determined according to Bradford (14) with
bovine serum albumin as the standard.
Isolation of cDNAs of the 41- and 40-kDa Polypeptides--
A
cDNA library prepared from C. japonica cells was
screened with oligonucleotide probes designed for the internal amino
acid sequences of the purified 41- and 40-kDa polypeptides. After
approximately 200,000 plaque-forming units had been screened, 9 positive plaques were identified for the 41-kDa polypeptide and 18 for
the 40-kDa one. cDNAs isolated in pBluescript SK Nucleotide Sequence and Predicted Amino Acid Sequences of pBS41 and
pBS40--
The nucleotide sequences of the cDNA inserts of pBS41
and pBS40, which encoded the longest polypeptide, and of other cDNA inserts were determined (GenBankTM accession numbers:
D29812 for 41 kDa and D29811 for 40 kDa). Sequences respectively
corresponding to the 41- and 40-kDa polypeptides carried 1,280 and
1,267 nucleotides, with open reading frames that encoded for 350 and
347 amino acids (Fig. 2). The calculated
molecular masses of the pBS41 (38,731 Da) and pBS40 (38,655 Da) inserts
were less than the observed molecular masses of the 41- and 40-kDa
polypeptides from Coptis cells, but the deduced amino acid
sequences had almost all the internal amino acid sequences determined
from the purified polypeptides.
Both polypeptide sequences had conserved putative AdoMet binding
domains at the C-terminal end (Fig. 2, motif A-C) (13), and both had 52 amino acids between motifs A and B and 30 amino acids between motifs B
and C. This spatial relationship is identical to that of the caffeic
acid 3-O-methyltransferases. The 41- and 40-kDa polypeptides
therefore belong to the Pl (plant)-OMT II group (13).
Their deduced amino acid sequences have a high degree of similarity
(52% identity); whereas SMT, which also functions in berberine biosynthesis, showed much lower homology when its amino acid sequence was compared with that of the 41- or 40-kDa polypeptide (about 30%
identity, see Fig. 2). Both polypeptides had a high degree of
similarity (about 40% identity) to the isoflavone
7-O-methyltransferase of alfalfa (15),
6a-hydroxymaackiain 3-O-methyltransferase of pea
(16), and hydroxycinnamic acids/hydroxycinnamoyl CoA esters O-methyltransferase of lobolly pine (17). SMT had greater
similarity to the caffeic acid 3-O-methyltransferases and
catechol O-methyltransferases of several plant species. Both
the 41- and 40-kDa polypeptides had a somewhat low identity (24 and
35%, respectively) to catechol OMTs from Thalictrum
tuberosum (Thatu 1 and 2, respective GenBankTM
accession numbers AF064693 and AF064694), even though these catechol
OMTs from cultured T. tuberosum cells could methylate the
6-hydroxyl group of norcoclaurine (18). Phylogenic analysis clearly
indicated that both the polypeptides belong to a different branch
than the catechol OMT from Thalictrum (Thatu 2) (Fig.
3).
Expression of the 41- and 40-kDa Polypeptides in E. coli--
Expression vectors (pE41 and pE40, respectively) to produce
recombinant proteins in E. coli were constructed to identify
the enzymological activities of the 41- and 40-kDa polypeptides. We modified the first methionine codons of both cDNA inserts to fit the NcoI-XhoI sites of the E. coli
expression vector pET-21d to obtain expression of nontagged
polypeptides. These constructs then were introduced into E. coli cells, and recombinant protein production was induced. The
crude E. coli lysate was used to identify the enzymatic
activities of both 4'- and 6-OMT. HPLC analysis clearly showed that the
cell lysate that expresses pE41 had methylation activity for
3'-hydroxy-N-methylcoclaurine, but not for norcoclaurine, whereas the lysate containing pE40 had methylation activity for norcoclaurine but not for 3'-hydroxy-N-methylcoclaurine
(data not shown). The crude E. coli lysate carrying the
pET-21d vector showed no enzymatic activity. LC-MS analysis confirmed
that the respective reaction products of 41 kDa with 6-OMe-NLS and of
40 kDa with NLS were norreticuline and 6-OMe-NLS (Fig.
4), indicative that the 41-kDa
polypeptide corresponds to 4'-OMT and the 40-kDa one to 6-OMT.
Purification of 4'-OMT and Its Characterization--
Because
preparation of 4'-OMT without 6-OMT contamination is now possible, we
tried to prepare highly purified 4'-OMT from E. coli. The
final purification was 9.8-fold and the yield 35.9% (Table
I and Fig.
5). SDS-PAGE analysis showed clearly that
the purified fraction was almost homogeneous. The molecular mass of active 4'-OMT was estimated to be about 80 kDa by gel filtration chromatography, evidence that active 4'-OMT is a dimer of the 41-kDa
subunit. Enzyme assays at various pH values indicated that the optimum
pH for the methylation of 6-OMe-NLS was about 8.0. Half-maximal
activity was found at pH 6.6 or 8.6.
4'-OMT, like Coptis 6-OMT, did not require divalent cations
for activity. The addition of Fe2+, Cu2+,
Co2+, Zn2+, or Ni2+ at 5 mM inhibited 4'-OMT activity, respectively, by 87%, 100%, 86%, 48%, or 96%. These cations also inhibited 6-OMT activity (4).
Other cations (Ca2+, Mg2+, Mn2+)
had no effect on 4'-OMT activity. The enzymatic activity of 4'-OMT,
like that of 6-OMT, was negligibly inhibited by SH reagents (p-chloromercuribenzenesulfonate and iodacetamide) or EDTA
at 1 mM. When, however, berberine (the end product of
isoquinoline alkaloid biosynthesis in Coptis cells) was
added to the assay mixture at 2.5 mM, 4'-OMT activity was
not inhibited, whereas 1 mM berberine inhibited 6-OMT
activity by 30% (4).
Purified 4'-OMT was used as the antigen to prepare anti-4'-OMT
polyclonal antibody. In a Western blot analysis with this antibody, both the crude extract of E. coli-expressing 4'-OMT and the
Coptis proteins had a major immunoreactive band of the same
molecular mass (data not shown). This suggests that 4'-OMT is produced
in mature form in E. coli, whereas the SMT expressed in
E. coli apparently is longer than that purified from
Coptis cells (10). Hydrophobicity analysis of full-length
4'-OMT, 6-OMT, and SMT showed a difference in the hydrophobicity of
their N termini. There was no evidence that 4'- or 6-OMT is located in
specific vesicles, whereas SMT had a hydrophobic signal sequence of 10 amino acids at its N terminus (10) (data not shown).
Substrate Specificity of 4'-OMT--
The incorporation of
radioactivity from
S-adenosyl-L-[methyl-3H]methionine
to the products was used as a marker of substrate specificity (Fig.
6). When (R,S)-6-OMe-NLS was
the control substrate (i.e. relative incorporation 100%),
the respective relative activities with (R,S)-laudanosoline
and (R,S)-norlaudanosoline were 767 and 118%, whereas no
significant methylation was found for the other substrates. The
preferential methylation of laudanosoline rather than norlaudanosoline
suggests that N-methylation proceeds before 4'-O-methylation, as suggested by Stadler and Zenk (1).
Dependence of Initial Velocity on Substrate Concentrations and
Product Inhibition Kinetics--
Whereas
(S)-3'-hydroxy-N-methylcoclaurine is the true
intermediate in reticuline biosynthesis (3), 6-OMe-NLS was used as the
substrate for the kinetic assay of 4'-OMT due to the availability of
this compound and similar product formation in the reaction (5).
Substrate-saturation kinetics of the purified 4'-OMT for 6-OMe-NLS and
AdoMet were the typical Michaelis-Menten type. Kinetic parameters
therefore were estimated from double-reciprocal plots of the initial
velocity versus the substrate concentration. By varying the
concentration of 6-OMe-NLS and [3H]AdoMet in the range of
8-125 µM, a set of apparent Km and
Vmax values could be calculated and replotted to
determine the real Km and
Vmax. The respective Km
values of 4'-OMT for (R,S)-6-OMe-NLS and AdoMet
were 42 and 68 µM, with a Vmax of
1.8 nkat/mg protein. The pattern of primary reciprocal plots was
representative of a sequential substrate binding mechanism (data not shown).
Product inhibition analysis was used to determine the reaction
mechanism. 4'-O-methylated 6-OMe-NLS (norreticuline) was
used for inhibition by the methylated alkaloid. Double-reciprocal plots of the initial velocity versus the concentrations of
6-OMe-NLS, with respect to different fixed concentrations of
S-adenosyl-L-homocysteine (AdoHcy), gave a
series of lines intersecting to the left of the y axis (Fig.
7A). AdoHcy inhibition
therefore was noncompetitive with respect to variations in 6-OMe-NLS as
the substrate, and the Ki value was 43 µM. The inhibition constants were obtained as described
elsewhere (19). AdoHcy inhibition with respect to varying AdoMet gave a
series of lines that intersected at the y axis, indicative
that the inhibition was competitive (Fig. 7B). The
Ki value for AdoHcy versus AdoMet was 27 µM. Norreticuline inhibition with respect to varying the
6-OMe-NLS and AdoMet concentrations gave a series of lines intersecting to the left of the y axis (Fig. 7, C and
D). Norreticuline inhibition with respect to 6-OMe-NLS and
AdoMet therefore was noncompetitive. The respective
Ki values for norreticuline versus
6-OMe-NLS and AdoMet were 103 and 115 µM. These findings
indicate that 4'-OMT followed an ordered Bi Bi mechanism, in which
AdoMet binds to the enzyme before the alkaloid substrate binds to the
enzyme, after which the methylated alkaloid and AdoHcy are released
sequentially.
We isolated full-length cDNA clones that encodes
3'-hydroxy-N-methylcoclaurine 4'-OMT and 6-OMT from cultured
C. japonica cells. Clone identity was confirmed by the
catalytic activities of the heterologously expressed polypeptides.
Because these enzymes had very similar physical properties, it was not
possible to separate them in the active form (4, 5). Our study provides
the first evidence that 4'-OMT and 6-OMT are encoded by different polypeptides.
Characterization of the recombinant 4'-OMT indicated that previous data
obtained for partially purified Berberis 4'-OMT was reliable. Coptis 4'-OMT has a substrate specificity similar
to that of the Berberis enzyme; an adjacent 3'-hydroxyl
group is essential for the 4'-O-methylation reaction, and
N-methylation of the substrate enhances the reaction rate.
Previous reports suggested that 4'- and 6-OMT have similar physical
properties (4, 5). Indeed, they have similar enzymological properties
that are distinct from those of SMT: active 4'- and 6-OMT are dimers of
the subunit, whereas SMT is a trimer. 4'- and 6-OMT activities are
negligibly inhibited by SH reagents, whereas SMT activity is inhibited
by the SH reagent, p-chloromercuribenzonate, evidence that
the SH group(s) is involved in SMT activities. Effects of cations on
the 4'- and 6-OMT activities were very similar, but each polypeptide
has distinctive properties in terms of Km values,
substrate specificity, and the proposed reaction mechanism. Interestingly, 4'-OMT activity was not sensitive to berberine, the end
product of alkaloid biosynthesis in Coptis, whereas the inhibitory effect of alkaloids on Berberis 4'-OMT (5) and
Coptis 6-OMT and SMT has been reported (4, 8).
OMT characteristics are summarized in Table
II. The deduced amino acid sequences of
4'- and 6-OMT have 52% identity, and SMT has 30% identity to both 4'-
and 6-OMT. The enzymological similarities and differences are
interesting in terms of molecular evolution and sequence similarities
and diversities, in particular the aspects of substrate
recognition.
Molecular Characterization of the
S-Adenosyl-L-methionine:3'-Hydroxy-N-methylcoclaurine
4'-O-Methyltransferase Involved in Isoquinoline Alkaloid
Biosynthesis in Coptis japonica*
,
§,
¶, and
**
Division of Applied Life Science, Graduate
School of Agriculture, Kyoto University, Kyoto 606-8502, Japan and the
Division of Integrated Life Sciences, Graduate School of
Biostudies, Kyoto University, Kyoto 606-8502, Japan
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
![]()
INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

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Fig. 1.
Schematic biosynthetic pathway for a variety
of isoquinoline alkaloids and the substrates for the routine
O-methyltransferase assay.
(R,S)-Norlaudanosoline and
(R,S)-6-O-methylnorlaudanosoline
(squared) were used as the substrates for the routine assay of 6- and
4'-OMT, respectively.
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EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
) were excised in vivo with a ZAP-cDNA
synthesis kit and used for transformation to E. coli
XL1-Blue. The cDNA clones (designated pBS41 for the 41-kDa
polypeptide and pBS40 for the 40-kDa polypeptide) were analyzed by
Southern blot hybridization using both probes and by digestion with the
restriction enzyme.
20 °C in the presence of approximately 40% glycerol,
with no detectable activity loss over 5 months.
![]()
RESULTS
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
(designated pBS41s and pBS40s) had inserts of 1.0-1.4 kilobase pairs.

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Fig. 2.
Amino acid sequence alignment of the
O-methyltransferases in berberine biosynthesis.
Motifs A, B, and C, conserved sequence
motifs in plant
S-adenosyl-L-methionine-dependent
methyltransferase. Boxes indicate identical amino acid
residues.

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Fig. 3.
Phylogenic tree of plant
S-adenosyl-L-methionine-dependent O-methyltransferase
sequences. OMT protein sequences obtained from GenBankTM were used
for tree building. Totally, 19 sequences were aligned by the
multisequence alignment program in GeneWorks 2.5.1 (IntelliGenetics,
Inc.) using the UPGMA (unweighted pair group maximum average) method.
SMT, S-adenosyl-L-methionine:scoulerine
9-O-methyltransferase; AEOMT, hydroxycinnamic
acids/hydroxycinnamoyl CoA esters O-methyltransferase.

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Fig. 4.
LC-MS analysis of the 41-kDa reaction product
(A), authentic norreticuline (B),
40-kDa reaction product (C), and authentic
6-O-methylnorlaudanosoline (D).
Purification of recombinant 4'-OMT from E. coli lysate

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Fig. 5.
SDS-PAGE of 4'-OMT fractions in various
stages of purification. Fractions from each purification step were
separated by SDS-PAGE and stained with Coomassie Brilliant Blue G-250.
Lane 1, molecular mass markers; lane 2, crude
extract (10 µg); lane 3, Q-Sepharose column fraction (8 µg); lane 4, Bio-Gel HPT column fraction (1 µg).

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Fig. 6.
Transfer by 6-OMT, 4'-OMT, and SMT of the
[3H]methyl group of
S-adenosyl-L-methionine to different
substrates. Numerals under the structures indicate the
incorporation of radioactivity from
S-adenosyl-L-[methyl-3H]methionine
into the product relative to the standard substrate (100%):
(S)-norcoclaurine,
(R,S)-6-O-methylnorlaudanosoline,
(R,S)-scoulerine, respectively, for 6-OMT,
4'-OMT, and SMT. Values given are for 6-OMT (left), 4'-OMT
(middle), and SMT (right). n.t., not
tested.

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Fig. 7.
Product inhibition of the 4'-OMT reaction
presented as double-reciprocal plots. A, inhibition of
the methylation reaction by AdoHcy with respect to 6-OMe-NLS. The
concentration of AdoMet was fixed at 60 µM. B,
inhibition of the methylation reaction by AdoHcy with respect to
AdoMet. The concentration of 6-OMe-NLS was fixed at 40 µM. C, inhibition of the methylation reaction
by norreticuline with respect to 6-OMe-NLS. The concentration of AdoMet
was fixed at 60 µM. D, inhibition of the
methylation reaction by norreticuline with respect to AdoMet. The
concentration of 6-OMe-NLS was fixed at 40 µM.
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DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
O-Methyltransferases in berberine biosynthesis
The berberine bridge enzyme (20-22) and (S)-N-methylcoclaurine 3'-hydroxylase (CYP80B1) (23) utilize benzylisoquinoline alkaloids as substrate. The multiple sequence alignments of Coptis OMTs and these enzymes did not, however, show any sequence homology (data not shown). As with many proteins, the three-dimensional structure, rather than the primary sequence, is more important for substrate recognition. The C-terminal ends of 4'-OMT and 6-OMT are highly conserved (58% identity) for the putative AdoMet binding, but the N-terminal ends are more divergent even among these related OMTs (47% identity) (Fig. 2). These findings suggest that the N-terminal end constitutes the alkaloid-binding pocket and that these sequence diversities reflect the substrate specificities of the enzymes. X-ray diffraction studies of Coptis OMTs, characterization of the chimeric enzymes among the Coptis OMTs, or both, should prove useful for understanding the importance of the N-terminal end of OMT in substrate recognition.
Frick and Kutchan (19) reported that catechol OMTs (Thatu 1 and 2)
isolated from T. tuberosum cells have very broad substrate specificity and catalyze the 6-hydroxyl methylation of norcoclaurine. These enzymes catalyzed the same reaction for 6-OMT, but showed fairly
low identity with 6-OMT (35% identity). They obtained another catechol
OMT (Thatu 4), which could not catalyze the methylation of isoquinoline
alkaloid. Thatu 1 and Thatu 4 differ by only one amino acid; Thatu 1 has tyrosine, and Thatu 4 has cysteine at position 21. As shown in Fig.
3, the alkaloid and phenylpropanoid OMTs may be related evolutionarily,
whereas the 4'- and 6-OMT obviously belong to a different branch of the
phylogenic tree. OMTs provide us useful information on the molecular
evolution of secondary plant metabolism.
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ACKNOWLEDGEMENTS |
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We thank Dr. N. Nagakura and Mitsui Petrochemical Industries Ltd. for their generous gifts of the alkaloids, and we are grateful to Dr. A. Ishihara of Kyoto University for his technical assistance in the LC-MS analysis.
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FOOTNOTES |
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* This work was supported in part by Grant-in-aid B (08456172) from the Ministry of Education, Science, Sports and Culture, Japan.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) D29811 (for 6-OMT) and D29812 (for 4'-OMT).
§ Present address: Pharmaceutical Research Institute, Kyowa Hakko Kogyo, 1188 Shimotogari, Nagaizumi-cho, Suntou-gun, Shizuoka 411-8731, Japan.
¶ Present address: Nara Institute of Science and Technology, Nara 630-0101, Japan.
** To whom all correspondence should be addressed. Tel.: 81-75-753-6380; Fax: 81-75-753-6398; E-mail: fumihiko@kais.kyoto-u.ac.jp.
Published, JBC Papers in Press, May 12, 2000, DOI 10.1074/jbc.M002439200
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ABBREVIATIONS |
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The abbreviations used are: 6-OMT, S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase; 4'-OMT, S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase; NMT, S-adenosyl-L-methionine:coclaurine N-methyltransferase; AdoMet, S-adenosyl-L-methionine; SMT, S-adenosyl-L-methionine:scoulerine 9-O-methyltransferase; AdoHcy, S-adenosyl-L-homocysteine; OMT, O-methyltransferase; PCR, polymerase chain reaction; HPLC, high performance liquid chromatography; LC-MS, liquid chromatography-mass spectroscopy; 6-OMe-NLS, 6-O-methylnorlaudanosoline; NLS, norlaudanosoline; PAGE, polyacrylamide gel electrophoresis; CHES, 2-(cyclohexylamino)ethanesulfonic acid.
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REFERENCES |
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| 1. | Stadler, R., and Zenk, M. H. (1990) Liebigs Ann. Chem. 6, 555-562 |
| 2. | Ruffer, M., Nagakura, N., and Zenk, M. H. (1983) Planta Med. 49, 131-137 |
| 3. | Müller, M. J., and Zenk, M. H. (1992) Planta Med. 58, 524-527 |
| 4. | Sato, F., Tsujita, T., Katagiri, Y., Yoshida, S., and Yamada, Y. (1994) Eur. J. Biochem. 225, 125-131 |
| 5. | Frenzel, T., and Zenk, M. H. (1990) Phytochemistry 29, 3505-3511 |
| 6. | Wat, C.-K., Steffens, P., and Zenk, M. H. (1986) Z. Naturforsch. 41c, 126-134 |
| 7. | Frenzel, T., and Zenk, M. H. (1990) Phytochemistry 29, 3491-3497 |
| 8. | Poulton, J. E. (1981) in The Biochemistry of Plants (Conn, E. E., ed), Vol. 7 , pp. 667-723, Academic Press, New York |
| 9. | Muemmler, S., Ruffer, M., and Zenk, M. H. (1985) Plant Cell Rep. 4, 36-39 |
| 10. | Sato, F., Takeshita, N., Fitchen, J. H., Fujiwara, H., and Yamada, Y. (1993) Phytochemistry 32, 659-664 |
| 11. | Takeshita, N., Fujiwara, H., Mimura, H., Fitchen, J. H., Yamada, Y., and Sato, F. (1995) Plant Cell Physiol. 36, 29-36 |
| 12. | Sato, F., and Yamada, Y. (1984) Phytochemistry 23, 281-285 |
| 13. | Joshi, C. P., and Chiang, V. L. (1998) Plant Mol. Biol. 37, 663-674 |
| 14. | Bradford, M. M. (1976) Anal. Biochem. 72, 248-254 |
| 15. | He, X. Z., Reddy, J. T., and Dixon, R. A. (1998) Plant Mol. Biol. 36, 43-54 |
| 16. | Wu, Q., Perisig, C. L., and VanEtten, H. D. (1997) Plant Mol. Biol. 35, 551-560 |
| 17. | Li, L., Popko, J. L., Zhang, X. H., Osakabe, K., Tsai, C. J., Joshi, C. P., and Chiang, V. L. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 5461-5477 |
| 18. | Frick, S., and Kutchan, T. M. (1999) Plant J. 17, 329-339 |
| 19. | Dixon, M., and Webb, E. C. (1979) Enzymes , 3rd Ed. , Longman Group Ltd., London |
| 20. | Dittrich, H., and Kutchan, T. M. (1991) Proc. Natl. Acad. U. S. A. 88, 9969-9973 |
| 21. | Facchini, P. J., Penzes, C., Johnson, A. G., and Bull, D. (1996) Plant Physiol. 112, 1669-1677 |
| 22. | Hauschild, K., Pauli, H. H., and Kutchan, T. M. (1998) Plant Mol. Biol. 36, 473-478 |
| 23. | Pauli, H. H., and Kutchan, T. M. (1998) Plant J. 13, 793-801 |
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