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J. Biol. Chem., Vol. 275, Issue 41, 32052-32056, October 13, 2000
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From the
Edward A. Doisy Department of Biochemistry,
St. Louis University School of Medicine, St. Louis, Missouri 63104 and § Cancer Immunology Division, the Peter MacCallum Cancer
Institute, East Melbourne 3002, Victoria, Australia
Received for publication, June 14, 2000, and in revised form, July 3, 2000
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ABSTRACT |
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The human ELL gene, which is a
frequent target for translocation in acute myeloid leukemia, was
initially isolated from rat liver nuclei and found to be an RNA
polymerase II elongation factor. Based on homology to ELL, we later
cloned ELL2 and demonstrated that it can also increase the catalytic
rate of transcription elongation by RNA polymerase II. To better
understand the role of ELL proteins in the regulation of transcription
by RNA polymerase II, we have initiated a search for proteins related
to ELLs. In this report, we describe the molecular cloning, expression,
and characterization of ELL3, a novel RNA polymerase II elongation factor approximately 50% similar to both ELL and ELL2. Our
transcriptional studies have demonstrated that ELL3 can also increase
the catalytic rate of transcription elongation by RNA polymerase II.
The C-terminal domain of ELL, which we recently demonstrated to be
required and sufficient for the immortalization of myeloid progenitor
cells, shares strong similarities to the C-terminal domain of ELL3.
ELL3 was localized by immunofluorescence to the nucleus of cells, and Northern analysis indicated that ELL3 is a testis-specific RNA polymerase II elongation factor.
Many cellular factors involved in human oncogenesis have been
identified as genes at breakpoints of frequently occurring chromosomal translocations. The protein products of some of these genes are transcriptional factors that regulate the general or specific expression of many genes. The ELL gene was initially
identified on chromosome 19p13.1, which undergoes frequent
translocation with the trithorax-like MLL
(ALL-1, HRX) gene on chromosome 11q23 in acute
myeloid leukemia (1, 2). ELL is a 621 amino acid-containing protein that can increase the catalytic rate of transcription elongation of RNA polymerase II by suppressing transient pausing at
multiple sites along the DNA from both promoter-dependent
and promoter-independent templates (3-5). To date, eight elongation factors have been defined biochemically (17, 24). These factors are named SII (6-9), P-TEFb (10-11), DSIF (11-13), factor 2 (11, 14), TFIIF (15), elongin (SIII) (16), ELL (3, 18), and ELL2 (19). These
RNA polymerase II elongation factors fall into several functional
classes. Some can prevent arrest, like P-TEFb and SII. Some can
regulate the rate of transcription elongation through nucleosomes, such
as FACT (20). Others operate to increase the catalytic rate of
transcription elongation by altering the Km and/or
the Vmax of the polymerase, such as TFIIF, elongin (SIII), the ELL complex, and ELL2 (4, 5).
In an effort to better understand how transcription elongation by RNA
polymerase II is controlled under normal conditions and in disease
states, we are attempting to reconstitute RNA polymerase II
transcription elongation machinery in vitro. In so doing, we have now identified and cloned a novel ELL family member, ELL3, and
characterized its biochemical role in regulating transcription elongation.
Cloning and Expression of ELL3--
Searches of
GenBankTM identified a short expressed sequence tag
(accession number AA527300) that exhibited homology to the 3'-end of
the coding regions of human ELL and ELL2. This partial sequence of
human ELL3 enabled us to design a gene-specific primer 5'-GGTAGTCTGGTATATCTTCAGGACTTGGGGAT-3', which was used to
obtain the 5'-end of ELL3 by rapid amplification of the cDNA ends
with Marathon Ready Human cDNA as the template
(CLONTECH). The full-length human ELL3
ORF1 was obtained by PCR
amplification of a human cDNA library using ELL3-specific 5'
primer (5'-GAGGTGTCGACATGGAGGAGCTCCATGAGCCTCTG-3') and 3' antisense
primer (5'-GTGTGGATCCTCTCATCAGCTGCCCCTGTTCTTTTCCTC-3') using DNA
polymerase Tli (Promega) with proofreading ability. The
construct for expression of histidine-tagged ELL3 in bacteria was
prepared by introducing the ELL3 ORF-containing PCR product into the
SalI and BamHI sites of M13mpET bacteriophage
vector, which contains the complete pETT7 transcription-translation
regions as well as the sequence encoding the His tag.
Recombinant ELL3 protein was expressed in Escherichia coli
and purified from guanidine-solubilized inclusion bodies as described
previously (3). We were able to express ELL3 in E. coli in
an insoluble form; however, we were not able to either produce soluble
ELL3 or renature ELL3 in a soluble form when expressed in E. coli inclusion bodies. Therefore, we set to express ELL3 in
mammalian cells. The construct for expression of N-terminal
histidine-tagged and C-terminal FLAG-tagged ELL3 in 293 tissue culture
cells was obtained by PCR amplification using ELL3 specific 5' primer
(5'-AATGAGAATTCATGCATCATCATCATCATCATGGTATGGAGGAGCTCCATGAGCCTCTG-3') and 3' antisense primer
(5'-GTTTTTCTAGACTATTTGTCGTCGTCGTCTTTGTAGTCGTTCTTTTCCTCAAACTCCAGGAT-3'). The digested PCR product was introduced into the EcoRI
and XbaI sites of the tetracycline-regulated pTRE mammalian
expression vector (CLONTECH). One µg of pTRE-ELL3
expression vector and 500 ng of pTK-Hyg selection vector
(CLONTECH) were cotransfected into 6 × 106 293 cells cultured in Eagle's minimal essential medium
supplemented with 10% fetal bovine serum, 3 mM
L-glutamine, 100 µg/ml penicillin/streptomycin, 100 µg/ml G418 sulfate by lipofection. 48 h after transfection, cells were cultured in Eagle's minimal essential medium supplemented with 10% fetal bovine serum, 3 mM L-glutamine,
100 µg/ml penicillin/streptomycin, 100 µg/ml G418 sulfate, 100 µg/ml hygromycin B, 1 µg/ml tetracycline. Individual clones were
trypsinized using cloning cylinders and plated into individual flasks.
To induce expression of ELL3, 6 × 106 cells were
cultured in Eagle's minimal essential medium supplemented with 10%
fetal bovine serum, 3 mM L-glutamine, 100 µg/ml penicillin/streptomycin, 100 µg/ml G418 sulfate, 100 µg/ml
hygromycin B. After 48 h, cells were harvested in 300 mM AmSO4 extraction buffer and lysed by sonication. ELL3 was purified from total cell extracts by affinity chromatography with anti-FLAG M2 affinity gel (Sigma). The anti-FLAG M2
affinity gel was washed twice with high salt buffer (25 mM HEPES, pH 7.6, 500 mM NaCl, 0.1% Nonidet P-40, and 1 mM dithiothreitol). Approximately 100 µl of gel was
incubated in batch with 500 µl of cell extract and tumbled at
4 °C for 1 h. The gel was collected by low speed centrifugation
for 30 s and washed three times by resuspension in 500 µl of
high salt buffer followed by three washes in 500 µl of low salt
buffer (25 mM HEPES, pH 7.6, 150 mM NaCl, 0.1%
Nonidet P-40, and 1 mM dithiothreitol). Bound proteins were eluted with 100 µl of elution buffer (100 µg/ml FLAG peptide in low
salt buffer). Protein elutions were aliquoted and frozen at Immunofluorescence Staining--
Poly-L-lysine (1 mg/ml)-coated coverslips were placed in six-well tissue culture plates.
1 × 106 ELL3 293 cells were plated on the coverslips
and grown to approximately 70% confluency in Eagle's minimal
essential medium supplemented with 10% fetal bovine serum, 3 mM L-glutamine, 100 µg/ml
penicillin/streptomycin, 100 µg/ml G418 sulfate, 100 µg/ml
hygromycin B, with or without 1 µg/ml tetracycline. Coverslips were
washed briefly three times with 1× PBS and fixed with 3.7%
paraformaldehyde in PBS followed by methanol for 6 min at Transcription Elongation Assays--
Preinitiation complexes
were assembled at the AdML promoter with recombinant TBP, TFIIB, TFIIE,
TFIIF, and purified rat TFIIH and RNA polymerase II as described (3).
Transcription was initiated by the addition of 50 µM ATP,
50 µM GTP, 2 µM UTP, 10 µCi of
[ Northern Blot Analysis--
Nitrocellulose filters containing
approximately 2 mg of poly(A)+ RNA/lane from 16 different
adult human tissues (CLONTECH) were used for
Northern analysis. Filters were prehybridized and hybridized in 50%
deionized formamide, 5× SSPE, 0.5% SDS, and 100 mg/ml denatured salmon sperm DNA at 42 °C. Blots were hybridized with
32P-labeled full-length ELL3 probe or Identification of Human ELL3--
A search of the
GenBankTM expressed sequence tag data base identified
multiple short expressed sequence tag clones that had great identity to
the C-terminal domains of ELL and ELL2. Since we recently demonstrated
that this domain of ELL is required for the immortalization of
myeloid progenitors by MLL-ELL found in human
leukemia,2 we set out to
identify this full-length protein. Employing rapid amplification of
cDNA ends-PCR and library hybridization methods, we obtained the
ORF encoding ELL3. An approximately 1.2-kb DNA fragment
containing the entire predicted ELL3 ORF was obtained by PCR using DNA
polymerase Tli (Promega) with proofreading ability, and several clones
were sequenced. The ELL3 ORF encodes an approximately 400-amino acid
protein with an apparent molecular mass of about 50 kDa. As determined
by the BESTFIT program of the Genetics Computer Group (GCG, Madison,
WI) package (21), ELL3 has about 50% identity with ELL and ELL2
throughout its ORF (Fig. 1).
Expression of ELL3 in Both Bacterial and Mammalian Cells and the
Biochemical Analysis of the Recombinant Protein for Transcriptional
Elongation Activity--
In our previous studies, we demonstrated that
both ELL and ELL2 are capable of stimulating the overall rate of RNA
chain elongation by RNA polymerase II by suppressing transient pausing
along the DNA template (19, 22). Our structure/function studies
demonstrated that the elongation activation domain of ELL and ELL2 lies
within the N-terminal 150 amino acids (19, 22). Since ELL3 demonstrated regions of high homology in its N terminus compared with ELL and ELL2,
we set out to determine if ELL3 can also increase the catalytic rate of
transcription elongation by RNA polymerase II in an in vitro
reconstituted transcription elongation system. A DNA fragment containing the ELL3 ORF was introduced into bacterial and mammalian expression vectors. Recombinant ELL3 proteins were expressed and were
purified with either nickel affinity chromatography or with FLAG
antibodies from bacterial or mammalian cells, respectively. The
homogeneity of the purified recombinant ELL3 proteins were tested by
the application of the purified protein to SDS-polyacrylamide gel
electrophoresis and analysis by either Colloidal staining or Western
analysis (Fig. 2, A and
B). The molecular mass of the recombinant ELL3
protein was approximately 50 kDa, in agreement with the predicted size
of the protein based on amino acid composition.
We next sought to determine if ELL3 could increase the catalytic rate
of transcription elongation by RNA polymerase II. As shown in Fig.
2C, ELL3 is an RNA polymerase II elongation factor with
functional properties similar to those reported for ELL and ELL2 (3,
19). The ability of ELL3 to increase the catalytic rate of
transcription elongation was tested employing transcription reactions
initiated from promoters and the basal transcription machinery.
Briefly, preinitiation complexes were assembled by preincubation of
purified RNA polymerase II, recombinant TBP, recombinant TFIIB,
recombinant TFIIE, recombinant TFIIF, and purified TFIIH with DNA
template containing AdML promoter. Highly radioactive transcripts were
synthesized during a brief pulse carried out in the presence of ATP,
GTP, UTP, and a limiting concentration of [ Analysis of the Expression Pattern of ELL3 in Human Tissue by
Northern Analysis--
To investigate the expression pattern of ELL3
in human tissue, Northern blots containing poly(A) RNA from various
human tissues were hybridized with a full-length ELL3-specific probe.
As shown in Fig. 3, only RNA from the
testis showed a single band at approximately 2-kb hybridizing
with human ELL3 probe. With lower stringency washes, a faint band
co-migrating with the testis-specific band was observed in the liver
and pancreas mRNA (data not shown). The blots were stripped and
reprobed with a human actin cDNA probe to ensure equivalent
mRNA loading.
Nuclear Localization of ELL3--
We developed stable cell lines
regulated for the expression of ELL3 as described under "Materials
and Methods." We constructed the FLAG-ELL3 cDNA under the minimal
cytomegalovirus promoter regulated by the tetracycline operator and
developed ELL3 293 Tet cell lines expressing full-length ELL3 under
control of the tetracycline-regulated promoter. Removal of tetracycline
from the tissue culture medium for 24 h resulted in the
expression of full-length ELL3 of approximately 50 kDa as determined by
Western blot using FLAG monoclonal antibody (data not shown). To
determine the subcellular localization of ELL3, we employed FLAG-ELL3
Tet Off cell lines and FLAG monoclonal antibody. As shown in Fig. 4A in the presence of
tetracycline, the expression of ELL3 is off. However, when tetracycline
is removed, we can see good expression of ELL3 by both
immunofluorescence (Fig. 4C) and Western analysis (data not
shown). The same cells that were stained with monoclonal antibodies for
the recognition of ELL3 were also stained with DAPI to visualize DNA
(Fig. 4B). It is clearly obvious from this experiment that
ELL3 immunoflurescence co-localizes with DAPI staining (compare Fig. 4,
B and C), indicating that ELL3 is targeted to the
nucleus of these mammalian cells (25).
We report here the identification, expression, and biochemical
analysis of ELL3, a novel RNA polymerase II elongation factor that is
specifically expressed in human testis. ELL3 is an approximately 400 amino acid-containing protein that has approximately 50% sequence identity to both ELL and ELL2 proteins (Fig. 1). Like ELL and ELL2,
ELL3 is also capable of increasing the catalytic rate of transcription
elongation catalyzed by RNA polymerase II initiated from promoters and
the basal transcription machinery. Our immunoflurescence studies have
indicated that ELL3 is localized in the nucleus of mammalian cells. We
note that proteins expressed under the transient trasfection conditions
are extremely overexpressed in cells and may result in the incorrect
interpretation of the localization data. For this reason, we have
developed an ELL3-stable cell line (which contains about 1 copy of
ELL3/cell) and have demonstrated that when ELL3 is expressed in these
cells, all of the ELL3 in all of the cells expressing ELL3 is found
within the nucleus. We find ELL3 diffused evenly within the nucleus, a
common characteristic of most general transcriptional elongation
factors (23).3 This method of
localization has also been used for both ELL and ELL2 and also the MLL protein.
We have recently demonstrated that the C-terminal domain of ELL is
required and sufficient for the immortalization of myeloid progenitors
by the MLL-ELL fusion protein found in patients with acute myeloid
leukemia.2 Our data also indicated that the presence of the
elongation activity of ELL can increase the number of immortalized
cells after the third round of passage.2 Very little is
known about the role of the C-terminal domain of ELL and how it may
function in biological systems. Since both ELL2 and ELL3 have strong
conservation of their C-terminal domain and exhibit a great degree of
homology to the C-terminal domain of ELL, we can speculate that this
domain of the ELLs plays a pivotal physiological role.
It has been demonstrated that expression of ELL in RAT1 cells leads to
increased colony formation, which is coincident with expression of the
AP-1 protein, c-Fos (5). Interestingly, these two functions depend on
the presence of a lysine-rich region within the C terminus present in
both ELL1 and ELL2 but not entirely present in ELL3. Whether ELL2
and/or ELL3 have similar oncogenic properties to those apparently
mediated by ELL remains to be determined.
We also note that a homology search of the GenBankTM data
base has revealed that the conserved C-terminal domain of the ELLs bears a striking resemblance to the ZO-1 binding domain of occludin (26, 27). This similarity of the C-terminal domain of ELL to the ZO-1
binding domain of occludin is about 42% for ELL2, 44% for ELL3, and
40% for ELL. The ZO-1 protein is a member of the family of
membrane-associated guanylate kinase homologs that is thought to be
important for signal transduction (28). The ZO-1 protein, which is
predominantly found in the cytosol of contact-inhibited cultured cells,
was recently demonstrated to translocate to the nucleus of subconfluent
cells (29). This indicates that ZO-1 may be involved in signaling
pathways controlled by cell-cell contact. Whether the conserved
C-terminal domain of the ELLs can interact with either ZO-1 or
ZO-1-like proteins or with proteins that interact with ZO-1 or
ZO-1-like proteins is currently unknown. However, it is feasible to
speculate that the ELLs can regulate transcription via a signal
transduction pathway involving the ZO-1 or ZO-1-like protein(s).
Studies of the functional interaction of ELL have demonstrated that ELL
is capable of interaction with p53 (2, 33). This interaction of ELL
with p53 results in the regulation of transcriptional activities of
both ELL and p53 in vitro (33). Structure/function studies
have demonstrated that functional interaction of ELL with p53 requires
the N-terminal half of ELL protein. We have tested if both ELL2 and
ELL3 interact with p53. Our functional interaction studies indicate
that ELL2 and ELL3 are both capable of physical interaction with p53
and that this interaction requires the C-terminal domain of p53 (data
not shown). The investigation of the physiological role for such
interactions between the ELLs with p53 is under way in our laboratories.
Our Northern analysis which was probed with a full-length ELL3 probe
has demonstrated that ELL3 is testis-specific. This is in contrast to
ELL, which is ubiquitously expressed, and ELL2 which is expressed in
most tissues tested except for the kidneys (19). There are other
testis-specific RNA polymerase II elongation factors such as SII and
elongin A2 (7, 30, 31). What is the function of these testis elongation
factors in vivo? The data presented, together with other
reports that have shown a dramatic increase of RNA polymerase II and
several other general transcription initiation factors during late
spermatogenesis in rodents (32) and also the lack of the expression of
ELL3 in ovaries, suggest that ELL3 may play an important role in the
process of spermatogenesis. However, the expression of ELL3 is not
detectable in ovaries; therefore, ELL3 may not play any general role in
meiosis. Currently, we are pursuing the cell type specificity of ELL3
and plan to generate ELL3-deficient mice to determine the role of this
protein in vivo. Finally, the ability of the ELLs to
regulate the rate of messenger RNA synthesis, catalyzed by RNA
polymerase II, makes the study of the mechanism of action of these
proteins extremely important in understanding the mechanism of
regulation of mammalian gene expression.
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
![]()
MATERIALS AND METHODS
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
70 °C
until use. The ELL3 that was purified via this method was used
in our biochemical analysis.
20 °C.
Slides were stained with M2 FLAG monoclonal antibody (Sigma) (1:1000)
in 1× PBS, 1% bovine serum albumin, 0.1% sodium azide for 45 min at
37 °C followed by staining with rabbit anti-mouse IgG conjugated to
fluorescein isothiocyanate (Jackson ImmunoResearch) (1:1000) in 1×
PBS, 1 µg/ml 4,6-diamidino-2-phenylindole (DAPI) for 15 min at
37 °C. Slides were washed three times with 1× PBS after each
incubation. Slides were mounted with elvanol mounting medium (12%
elvanol, 3% glycerol, 60 mM Tris, pH 8.5, 1 mg/ml
p-phenylenediamine) and photographed with an Olympus microscope.
-32P]CTP (ICN), and 7 mM
MgCl2. After 10 min at 28 °C, 100 µM
nonradioactive CTP was added to the reaction mixture, and short
transcripts were chased in the absence or presence of affinity-purified
ELL3 purified from 293 cells or purified protein from mock-transfected
293 cells for the times indicated. Transcripts were analyzed by
electrophoresis through a 6% polyacrylamide, 7 M urea gel
and developed using a Molecular Dynamics, Inc. (Sunnyvale, CA)
PhosphorImager instrument.
-actin cDNA
probes for 16 h at 42 °C. The filters were washed twice in 2×
SSC and 0.1% SDS for 30 min at 65 °C.
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RESULTS
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES

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Fig. 1.
Cloning of ELL3. Comparison of the
deduced amino acid sequences of human ELL, ELL2, and ELL3. The ELL3
sequence was obtained as described under "Materials and Methods."
Identical amino acids between ELL3 and ELL or ELL2 are indicated by
boxes.

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Fig. 2.
Expression and transcriptional elongation
activity of ELL3. A, colloidal staining analysis of
recombinant ELL3. Recombinant His-ELL3 was purified from E. coli by nickel chromatography as described under "Materials and
Methods," subjected to 12% SDS-polyacrylamide gel electrophoresis,
and visualized by colloidal staining. B, Western analysis of
mammalian expressed ELL3. FLAG-ELL3 cDNA under the minimal
cytomegalovirus promoter regulated by the tetracycline operator was
transfected into 293 tissue culture cells. Mammalian ELL3 was purified
by affinity FLAG chromatography as described under "Materials and
Methods," subjected to 12% SDS-polyacrylamide gel electrophoresis,
and analyzed by Western blotting with anti-FLAG antibody. C,
effects of ELL3 on the kinetics of promoter-dependent
transcription elongation. Preinitiation complexes were assembled at the
AdML promoter with recombinant TBP, TFIIB, TFIIE, TFIIF, and purified
rat TFIIH and RNA polymerase II. Transcription was initiated by the
addition of 50 µM ATP, 50 µM GTP, 2 µM UTP, 10 µCi of [
-32P]CTP. After 10 min at 28 °C, 100 µM nonradioactive CTP was added to
the reaction mixture, and short transcripts were chased in the presence
of affinity-purified ELL3 from 293 cells (lanes
5-8) or purified protein from mock-transfected 293 cells
(lanes 1-4) for the times indicated. Transcripts
were analyzed by 6% polyacrylamide, 7.0 M urea gel
electrophoresis and developed with a Molecular Dynamics PhosphorImager
instrument.
-32P]CTP.
These short promoter-specific transcripts were then elongated into
full-length run-off transcripts in the presence of either purified
protein from mock-transfected 293 cells (Fig. 2C,
lanes 1-4) or purified ELL3 from 293 cells (Fig.
2C, lanes 5-8) and excess
nonradioactive CTP. Transcripts were analyzed by electrophoresis through a 6% polyacrylamide, 7.0 M urea gel and developed
using a Molecular Dynamics PhosphorImager instrument. As shown in Fig. 2C, transcripts synthesized in the presence of ELL3
(lanes 5-8) were substantially longer than those
synthesized in its absence (lanes 1-4).

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Fig. 3.
Tissue distribution of ELL3 mRNA. A
human multiple tissue Northern blot was probed with a full-length ELL3
specific probe. Nitrocellulose filters containing ~2 mg of
poly(A)+ RNA/lane were prehybridized and hybridized in 50%
deionized formamide, 5× SSPE, 0.5% SDS, and 100 mg/ml denatured
salmon sperm DNA at 42 °C. Blots were hybridized with
32P-labeled ELL3 or
-actin cDNA probes for 16 h
at 42 °C. The filters were washed twice in 2× SSC and 0.1% SDS for
30 min at 65 °C and developed.

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Fig. 4.
Immunofluorescent localization of ELL3.
1 × 106 clonal ELL3 293 cells were plated on
coverslips in six-well tissue culture plates and grown to approximately
70% confluency in the absence or presence of 1 µg/ml tetracycline to
regulate ELL3's expression. Cells were fixed as described under
"Materials and Methods" and stained with M2 FLAG monoclonal
antibody (1:1000) in 1× PBS followed by staining with rabbit
anti-mouse IgG conjugated to fluorescein isothiocyanate (1:1000) in 1×
PBS, 1 µg/ml DAPI. After mounting, slides were photographed with an
Olympus microscope. A, ELL3 expression off
and stained for ELL3. B, ELL3 expression on and
stained with DAPI to visualize DNA. C, ELL3 expression
on and stained for ELL3.
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DISCUSSION
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
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ACKNOWLEDGEMENTS |
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A. S. thanks Dr. William S. Sly for encouragement and support and also Joyce Williams for critical reading of the manuscript. We are also grateful to Drs. Joan and Ronald Conaway for conversations.
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Note Added in Proof |
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While our manuscript was in proof, a search of the newly released database with ELL3 cDNA indicated that the gene encoding for human ELL3 is located on chromosome 15q15.
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FOOTNOTES |
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* This work was supported in part by American Cancer Society Grant RPG-99-218-01-MGO (to A. S.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
¶ An Edward Mallinckrodt, Jr., Young Investigator. To whom correspondence should be addressed: Edward A. Doisy Dept. of Biochemistry, Saint Louis University School of Medicine, 1402 S. Grand Blvd., Saint Louis, MO 63104. Tel.: 314-577-8137 or 314-577-8131; Fax: 314-268-5737; E-mail: Shilatia@slu.edu.
Published, JBC Papers in Press, July 5, 2000, DOI 10.1074/jbc.M005175200
2 DiMartino, J. F., Miller, T., Ayton, P., Landewe, T., Hess, J. L., Cleary, M. L., and Shilatifard, A. (2000) Blood, in press.
3 T. Landewe and A. Shilatifard, unpublished data.
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ABBREVIATIONS |
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The abbreviations used are: ORF, open reading frame; PCR, polymerase chain reaction; DAPI, 4,6-diamidino-2-phenylindole.
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REFERENCES |
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|
|
|---|
| 1. | Thirman, M. J., Levitan, D. A., Kobayashi, H., Simon, M. C., and Rowley, J. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 12110-12114 |
| 2. | Maki, K., Mitani, K., Yamagata, T., Kurokawa, M., Kanda, Y., Yazaki, Y., and Hirai, H. (1999) Blood 93, 3216-3224 |
| 3. | Shilatifard, A., Lane, W. S., Jackson, K. W., Conaway, R. C., and Conaway, J. W. (1996) Science 271, 1873-1876 |
| 4. | Shilatifard, A. (1998) FASEB J. 12, 1437-1446 |
| 5. | Conaway, J. W., and Conaway, R., C. (1999) Annu. Rev. Biochem. 68, 301-319 |
| 6. | Reines, D., Conaway, J. W., and Conaway, R. C. (1996) Trends Biochem. Sci. 21, 351-355 |
| 7. | Weaver, Z. A., and Kane, C. M. (1997) Genomics 46, 516-519 |
| 8. | Uptain, S., M., Kane, C., M., and Chamberlin, M. J. (1997) Annu. Rev. Biochem. 66, 117-172 |
| 9. | Gu, W., and Reines, D. (1995) J. Biol. Chem. 270, 11238-11244 |
| 10. | Marshall, N. F., and Price, D. H. (1995) J. Biol. Chem. 270, 12335-12338 |
| 11. | Price, D. (2000) Mol. Cell. Biol. 20, 2629-2634 |
| 12. | Wada, T., Takagi, T., Yamaguchi, Y., Ferdous, A., Imai, T., Hirose, S., Sugimoto, S., Yano, K., Hartzog, G. A., Winston, F., Buratowski, S., and Handa, H. (1998) Genes Dev. 12, 343-356 |
| 13. | Hartzog, G. A., Wada, T., Handa, H., and Winston, F. (1998) Genes Dev. 12, 357-369 |
| 14. | Xie, Z., and Price, D., H. (1996) J. Biol. Chem. 271, 11043-11046 |
| 15. | Price, D. H., Sluder, A. E., and Greenleaf, A. L. (1989) Mol. Cell. Biol. 9, 1465-1475 |
| 16. | Bradsher, J. N., Jackson, K. W., Conaway, R. C., and Conaway, J. W. (1993) J. Biol. Chem. 268, 25587-25593 |
| 17. | Reines, D., Conaway, R. C., and Conaway, J. W. (1999) Curr. Opin. Cell Biol. 11, 342-346 |
| 18. | Shilatifard, A. (1998) J. Biol. Chem. 273, 11212-11217 |
| 19. | Shilatifard, A., Duan, R. D., Haque, D., Florence, C., Schubach, W. H., Conaway, J. W., and Conaway, R. C. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 3639-3643 |
| 20. | Orphanides, G., LeRoy, G., Chang, C.-H., Luse, D. S., and Reinberg, D. (1998) Cell 92, 105-116 |
| 21. | Genetics Computer Group. (1994) Program Manual for the GCG Package, Version 9 , Genetics Computer Group, Madison, WI |
| 22. | Shilatifard, A., Haque, D., Conaway, R. C., and Conaway, J. W. (1997) J. Biol. Chem. 272, 22355-22363 |
| 23. | Thirman, M. J., Diskin, E. B., Bin, S. S., Ip, H. S., Miller, J. M., and Simon, M. C. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 1408-1413 |
| 24. | Shilatifard, A. (1997) Biol. Chem. 379, 27-31 |
| 25. | Tollefson, A. E., Hermiston, T. W., Lichenstein, D. L., Colle, C. F., Tripp, R. A., Dimitrov, T., Toth, K., Wells, C. E., Doherty, P. C., and Wold, W.S.M. (1998) Nature 392, 726-730 |
| 26. | Furuse, M., Itoh, M., Hirase, T., Nagafuchi, A., Yonemura, S., and Tsukita, S. (1994) J. Cell Biol. 127, 1617-1626 |
| 27. | Furuse, M., Hirase, T., Itoh, M., Nagafuchi, A., Yonemura, S., and Tsukita, S. (1993) J. Cell Biol. 123, 1777-1788 |
| 28. | Willott, E., Balda, M. S., Fanning, A. S., Jameson, B., Itallie, C. V., and Anderson, J. M. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 7834-7838 |
| 29. | Gottardi, C. J., Arpin, M., Fanning, A. S., and Louvard, D. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 10779-10784 |
| 30. | Umehara, T., Kida, S., Yamamoto, T., and Horikoshi, M. (1995) Gene (Amst.) 167, 297-302 |
| 31. | Aso, T., Yamazaki, K., Amimoto, K., Kuroiwa, A., Higashi, H., Matsuda, Y., Kitajima, S., and Hatakeyama, M. (2000) J. Biol. Chem. 275, 6546-6552 |
| 32. | Schmidt, E. E., and Schibler, U. (1995) Development 121, 2373-2383 |
| 33. | Shinobu, N., Maeda, T., Aso, T., Ito, T., Kondo, T., Koike, K., and Hatakeyama, M. (1999) J. Biol. Chem. 274, 17003-17010 |
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