|
Originally published In Press as doi:10.1074/jbc.M006907200 on August 31, 2000
J. Biol. Chem., Vol. 275, Issue 50, 39369-39378, December 15, 2000
T Lymphocyte-triggering Factor of African Trypanosomes Is
Associated with the Flagellar Fraction of the Cytoskeleton and
Represents a New Family of Proteins That Are Present in Several
Divergent Eukaryotes*
Kent L.
Hill §,
Nathan R.
Hutchings¶ ,
Paul M.
Grandgenett¶, and
John E.
Donelson ¶
From the Department of Biochemistry and
¶ Interdepartmental Genetics Ph.D. Program, University of Iowa,
Iowa City, Iowa 52242
Received for publication, August 1, 2000, and in revised form, August 29, 2000
 |
ABSTRACT |
The trypanosome cytoskeleton consists almost
entirely of microtubule-based structures. Although - and -tubulin
from Trypanosoma brucei have been well characterized, much
less is known about other cytoskeleton-associated proteins in
trypanosomes. Using biochemical fractionation, we demonstrate here that
T lymphocyte-triggering factor (TLTF) from T. brucei is a
component of the detergent-resistant and Ca2+-resistant
fraction of the parasite cytoskeleton. This fraction contains the
flagellar apparatus and a subset of cytoskeletal protein complexes that
together function in cell motility, cytokinesis, and organelle
inheritance. We also show that TLTF-related genes are present in
several highly divergent eukaryotic organisms. Although the function of
the corresponding proteins is not known, the mammalian TLTF-like gene
(GAS11; growth
arrest-specific gene 11) is
up-regulated in growth-arrested cells and is a candidate tumor
suppressor (Whitmore, S. A., Settasatian, C., Crawford, J.,
Lower, K. M., McCallum, B., Seshadri, R., Cornelisse, C. J., Moerland, E. W., Cleton-Jansen, A. M., Tipping, A. J.,
Mathew, C. G., Savnio, M., Savoia, A., Verlander, P., Auerbach,
A. D., Van Berkel, C., Pronk, J. C., Doggett, N. A., and
Callen, D. F. (1998) Genomics 52, 325-331),
suggestive of a role in coordinating cytoskeleton activities.
Consistent with this possibility, we show that the human GAS11
protein contains a 144-amino acid domain that co-localizes with
microtubules when fused to the green fluorescent protein and expressed
in mammalian cells. These findings suggest that TLTF represents a newly
defined protein family, whose members contribute to cytoskeleton
function in species as diverse as protozoa and mammals.
 |
INTRODUCTION |
The cytoskeleton is a central and defining feature of all
eukaryotic cells. In addition to providing each cell with its unique shape and form, the cytoskeleton plays a central role in cell division,
cell motility and subcellular trafficking of proteins and organelles.
In most eukaryotic cells, the cytoskeleton consists of three major
filament systems, microtubules, intermediate filaments, and actin
microfilaments, which form an interwoven scaffolding that permeates the
cytoplasmic space of the cell. In contrast, the cytoskeleton of
trypanosomes is composed almost entirely of microtubules and
microtubule-associated proteins and is further distinguished by the
conspicuous absence of transcellular filaments (1, 2).
African trypanosomes are protozoan parasites that cause African
trypanosomiasis, a fatal disease commonly called African sleeping sickness in humans and nagana in cattle. The two most prominent features of the trypanosome cytoskeleton are the flagellum, including the axoneme and paraflagellar rod, and a longitudinal array of cytoplasmic microtubules, collectively referred to as the subpellicular corset (2; see also Fig. 7). Two additional cytoskeletal structures observed by electron microscopy are an electron-dense filament that
defines the cytoplasmic side of the flagellum attachment zone
(FAZ)1 and a specialized
group of four reticulum-associated microtubules adjacent to the FAZ
filament (2-4). The flagellum, subpellicular corset, FAZ filament, and
special quartet of microtubules all run parallel to the long axis of
the cell and together function in organelle inheritance (5, 6), cell
division (6, 7), and cell motility (8).
As is the case in other eukaryotes, trypanosome microtubules are
composed of two main structural subunits ( - and -tubulin) that
interact with a number of less abundant microtubule-associated proteins
(4, 9). Trypanosome - and -tubulin have been well characterized
and are similar in sequence to those of other eukaryotes (4). They are
also subject to post-translational modifications that are observed in
other tubulins, including acetylation, glutamylation, and reversible
detyrosination (4, 10). Despite these similarities, trypanosome
microtubules exhibit a number of unusual features that make them an
attractive target for the development of anti-trypanosomal drugs (1,
11). These features include a highly ordered and uniformly polarized
organization, extensive intermicrotubule and membrane-microtubule
cross-links, and high stability at low temperatures (1, 6). Trypanosome microtubules also remain intact throughout the cell cycle (12) and are
resistant to anti-microtubule agents that are effective on mammalian
cells (1, 11). Since at least some of these distinguishing features
have been attributed to non-tubulin
cytoskeleton-associated/microtubule-associated proteins (1), a number
of biochemical and immunological approaches have been taken to identify
such proteins in trypanosomes (2, 9, 13, 14). In addition to increasing
our understanding of the cytoskeletal architecture of African
trypanosomes, the heavy dependence of this early diverging eukaryote on
microtubules for cytoskeleton function makes it likely that these
efforts will facilitate the identification of novel microtubule-binding
proteins (9).
In previous studies (15), we showed that a fusion protein, containing
the green fluorescent protein (GFP) fused to T lymphocyte-triggering factor (TLTF) from Trypanosoma brucei, is localized to
punctate structures near the trypanosome flagellar pocket, a
specialized invagination of the plasma membrane that forms where the
flagellum emerges from the cytoplasm (16). Deletion analysis of TLTF
identified an internal 144-amino acid domain that directs GFP to an
electron-dense structure on the cytoplasmic side of the anterior
flagellar pocket membrane (17). The analogous segment of a related
human protein (GAS11) directs GFP to the extreme posterior end of the
trypanosome cell (17), a position that has structural features in
common with the flagellar pocket (1, 18) and corresponds to the "plus" end of the subpellicular microtubules (6). These results, combined with the targeting properties of TLTF targeting domain mutants, led us to suggest that TLTF interacts with the cytoskeleton (17). In the present work, we use biochemical fractionation to
demonstrate that TLTF is associated with the trypanosome cytoskeleton. We also show that TLTF-related genes are present in a wide variety of
organisms and that a related human protein (GAS11) contains a novel
microtubule binding domain.
 |
EXPERIMENTAL PROCEDURES |
Trypanosome Strains and Culture Conditions--
Bloodstream form
trypanosomes (MVAT7) (19) were isolated with the buffy coat from the
blood of an infected rat, diluted 10-fold in PBS containing 1% glucose
and purified by DE52 cellulose chromatography (20). Maintenance of
insect form trypanosomes (YTAT1.1 from E. Ullu, Yale) and transient
transfection with plasmids encoding GFP and TLTF-GFP fusion
proteins (Fig. 1) have been described previously (17). To generate
stably transfected trypanosomes overexpressing TLTF (Fig.
2C) or GFP (Fig. 2, A and B), YTAT1.1 trypanosomes were transfected with NotI-linearized plasmids
pHD496:TLTF or pHD496:GFP, respectively, and selected for resistance to
hygromycin (50 µg/ml) as described previously (17).
Construction of Plasmids for Stable Transfections--
All
plasmids are based on pHD496 (21). To generate pHD496:GFP, the GFP
coding sequence was removed from pHD:HX-GFP (17) as a
HindIII/BamHI fragment and inserted into the
HindIII/BamHI sites of pHD496. To create
pHD496:TLTF, we employed a multistep cloning strategy. The 1362-bp TLTF
coding sequence has a unique HindIII site at position 1099. The last 263 bp of the TLTF coding sequence plus 120 bp of
3'-untranslated region were excised from plasmid pHD:GFP-CD (17) as a
HindIII/BamHI fragment and inserted into the
HindIII/BamHI sites of pHD496, yielding plasmid
pHD496:TLTF-CTerm. The first 1099 bp of the TLTF open reading frame was
introduced into pHD496:TLTF-CTerm as follows. Polymerase chain reaction
amplification with primers bearing EcoRI restriction sites
was used to place EcoRI sites on both sides of the TLTF open
reading frame. This polymerase chain reaction product was cloned into
the EcoRI site of pBluescript SK II (Stratagene), and
restriction mapping was used to identify a clone in which the TLTF
start codon is on the EcoRV side of the polylinker. The 5'
portion of the TLTF coding sequence was excised from this clone by
digestion with HindIII. This HindIII fragment was
inserted into the unique HindIII site of pHD496:TLTF-CT and
checked for orientation by restriction mapping. The resulting plasmid,
pHD496:TLTF, contains the entire TLTF coding sequence followed by 120 bp of the TLTF 3'-untranslated region. The sequences of all polymerase
chain reaction-amplified regions and cloning site junctions were
confirmed by automated fluorescent DNA sequencing at the University of
Iowa DNA sequencing facility.
RNA Preparation and Northern Blotting--
RNA was prepared from
trypanosomes with RNeasy reagent (Qiagen) according to the
manufacturer's instructions. Total RNA (5 µg) was analyzed by
Northern blot analysis as described previously (22), using
32P-labeled DNA containing the entire TLTF open reading
frame as a probe.
COS-7 Cell Transfections--
COS-7 cells (American Type Culture
Collection) were maintained at 37 °C in 5% CO2 and were
grown to confluence in RPMI medium supplemented with 10%
heat-inactivated fetal calf serum. DNA fragments encoding GFP or amino
acids 115-258 of GAS11 fused to GFP were excised from plasmids
pHD:HX-GFP and pHD:HumanHI-GFP, respectively (17). These fragments were
ligated into the HindIII/BamHI sites of the
pcDNA3 mammalian expression vector (Invitrogen Corp., Carlsbad, CA). For transfection, COS-7 cells were trypsinized, harvested by
centrifugation, washed in PBS-II (PBS containing 0.5 mM
MgOAc and 0.1 mM CaCl2), and then resuspended
in PBS-II at 1 × 107 cells/ml. Aliquots of 0.4 ml
were placed in 0.2-cm electroporation cuvettes (Bio-Rad) with 15 µg
of plasmid DNA and electroporated with one pulse of 300 V, 250 microfarads using a Bio-Rad Gene Pulser. Transfected cells were
transferred to fresh medium for 48 h and then processed for immunofluorescence.
Indirect immunofluorescence assays were performed essentially as
described (23). Cells were extracted with 0.5% Triton X-100 in a
microtubule-stabilizing buffer (24) prior to fixation. The monoclonal
antibody E7, directed against -tubulin, was developed by (25) and
obtained from the Developmental Studies Hybridoma Bank maintained by
the University of Iowa Department of Biological Sciences. E7 tissue
culture supernatant was used at a dilution of 1:400 in PBS containing
0.1% heat-inactivated fetal calf serum. Primary antibodies were
detected with Cy3-conjugated donkey -mouse IgG (Jackson
Laboratories) at a dilution of 1:500. Cells were visualized by
laser-scanning confocal microscopy as described previously (17).
Omission of primary or secondary antibodies resulted in no
immunofluorescence (not shown). Tubulin immunofluorescence (red) and
GFP fluorescence (green) were captured on separate channels and
superimposed using Adobe Photoshop 4.0.1 (Adobe Systems, San Jose, CA).
Protein Extracts, Immunoprecipitation, Subcellular Fractionation,
and Western Blotting--
Total protein extracts were prepared and
analyzed by Western blotting as described previously (17). The -TLTF
antibodies are described below. The -BiP (26) and -Hsp70
(cytoplasmic heat shock protein) antibodies (27) were generously
provided by J. Bangs (University of Wisconsin, Madison). The E7
-tubulin monoclonal antibody is described above. For
immunoprecipitation, procyclic trypanosomes were labeled with 100 µCi/ml 35S methionine/cysteine
(Expre35S35S; PerkinElmer Life Sciences) for
6 h as described (28). After labeling, a 10-fold excess of
unlabeled cysteine and methionine was added, and cells were harvested
by centrifugation, washed twice with PBS, resuspended in boiling buffer
(50 mM Tris, pH 7.5, 150 mM NaCl, 0.1 mM EDTA, 0.5% Tween 20), and boiled for 4 min. Lysates
were centrifuged for 2 min to remove insoluble debris, and 7 × 106 cell equivalents were immunoprecipitated as described
previously (29). Immunoprecipitations utilized 25 µl of
affinity-purified -TLTF-TT1 or 25 µl of polyclonal -GFP
antibodies (CLONTECH). Preliminary experiments
demonstrated that this quantity of -TLTF-TT1 immunoprecipitates all
TLTF in the sample (not shown). Immunoprecipitated proteins were
separated by SDS-PAGE and visualized by fluorography. Fractionation of
hypotonically lysed trypanosomes (Fig. 3) was performed as described
(26). Detergent-extracted cytoskeletons and Ca2+-resistant
flagellar fractions (Fig. 4) were obtained according to the method of
Robinson and colleagues (30). All fractions were monitored by
phase-contrast microscopy to ensure that lysis and
detergent/CaCl2 extraction was complete. Equal cell
equivalents of each fraction were resolved by SDS-PAGE and subjected to
Western blot analysis. For Western blot analysis, all antibodies were used at a dilution of 1:500-1:1000.
Production and Affinity Purification of -TLTF
Antisera--
The -TLTF-TT1 and -TLTF-TT4 rabbit polyclonal
antisera have been described previously (15). These antisera were
affinity-purified using Immobilon-P polyvinylidene difluoride strips
(Millipore Corp.) containing recombinant TLTF-thioredoxin fusion
protein (15) and incubated with Immobilon-P polyvinylidene difluoride strips containing recombinant thioredoxin to remove -thioredoxin antibodies. For -TLTF-Pep4, a synthetic peptide, "Pep4"
(CAAQTANIASLPRSNFE), containing the C-terminal 14 amino acids of TLTF
plus two alanine spacer residues and a cysteine at the N terminus for
cross-linking was synthesized by a commercial vendor, Research
Genetics, Inc. (Huntsville, AL). 10 mg of this peptide was coupled to
keyhole limpet hemocyanin for immunizations or to bovine serum albumin for affinity purification, using standard methods (31). Immunization of
rabbits with 500 µg of the KLH-Pep4 conjugate was done according to
standard methods (31) with boosts at 3, 7, and 13 weeks. Immune sera
were collected 2-3 weeks after each boost and tested by enzyme-linked
immunosorbent assay (31) for titer against the BSA-Pep4 conjugate. The
immune serum with highest titer was confirmed to recognize TLTF on
Western blots (not shown) and then affinity-purified using the BSA-Pep4
conjugate coupled to cyanogen bromide-activated Sepharose (Sigma).
Trypanosome Immunofluorescence Assays--
Trypanosomes were
harvested by centrifugation at 1000 × g and washed
once in PBS. Whole cells were settled directly onto chilled poly-L-lysine coated coverslips. Cytoskeletons and flagella
were prepared in solution (30), prior to being settled onto chilled poly-L-lysine-coated coverslips. All coverslips were washed
with PBS to remove unattached material, fixed as indicated in Table I,
and either rehydrated (for methanol/acetone fixations) or quenched (for
aldehyde fixation) using standard procedures (31). Blocking agents,
primary antibody, and secondary antibody were added as indicated in
Table I. After each antibody incubation, coverslips were washed at
least three times in PBS or in PBS containing 0.1-0.5% Tween 20 or
Triton X-100 and then incubated with -rabbit secondary antibodies
conjugated to fluorescein isothiocyanate or Texas Red (Molecular
Probes, Inc., Eugene, OR). Coverslips were mounted in
VectashieldTM and sealed prior to visualization on an
Olympus BH2 phase-contrast microscope equipped with a 100-watt mercury lamp.
 |
RESULTS |
TLTF Is a 54-kDa Protein That Is Expressed in Both Insect Form and
Bloodstream Form Trypanosomes--
Previous results from in
vivo targeting studies suggested that TLTF might interact with the
trypanosome cytoskeleton (17). To explore this possibility further, we
employed -TLTF antibodies to examine the behavior of TLTF in
biochemical fractionation experiments. Polyclonal antibodies
( -TLTF-TT1), raised against full-length, recombinant TLTF (15), were
affinity-purified by adsorption to TLTF on polyvinylidene difluoride
membranes (see "Experimental Procedures"). These affinity-purified
antibodies recognize two proteins of 41 and 54 kDa in extracts from
insect form trypanosomes (Fig.
1A, lane
WT). As expected, fusion proteins containing TLTF fused to
either the C terminus or N terminus of GFP are recognized by -GFP
antisera and by affinity-purified -TLTF-TT1 antibodies (Fig.
1A, lanes GT and TG).
Preimmune sera do not recognize the 41- or 54-kDa endogenous
trypanosome proteins or the GFP fusion proteins (not shown).
Interestingly, expression of the 41-kDa protein is subject to
developmental regulation, since it is absent in bloodstream form
trypanosomes (Fig. 1A, lane BF).

View larger version (35K):
[in this window]
[in a new window]
|
Fig. 1.
TLTF is a 54-kDa protein expressed in both
insect form and bloodstream form trypanosomes. A, total
protein extracts were prepared from wild type insect form trypanosomes
(WT), wild type bloodstream form trypanosomes
(BF), or insect form trypanosomes engineered to express
GFP-TLTF (GT) or TLTF-GFP (TG) fusion proteins.
Proteins were separated by SDS-PAGE, transferred to nitrocellulose
membranes, and probed with -GFP polyclonal antisera or
affinity-purified -TLTF-TT1 antibodies as indicated. All samples
from insect form parasites were run on a single gel, and bloodstream
form samples were run on a separate gel. The sizes and positions of
prestained protein MW standards are indicated. Black
arrowhead, TLTF; open arrowhead,
41-kDa -TLTF-TT1 cross-reactive protein; asterisk,
TLTF-GFP fusion proteins. B, Northern blot of total RNA
prepared from wild type insect form (IF) and bloodstream
form (BF) trypanosomes probed with a 32P-labeled
TLTF cDNA.
|
|
The TLTF cDNA encodes a 453-amino acid protein with a predicted
molecular mass of 54 kDa (15). This size corresponds well with
the size of the larger (54-kDa) endogenous trypanosome protein in Fig.
1A, and with the size of the TLTF-GFP fusion proteins (29 + 54 = 83 kDa) in Fig. 1A (asterisk,
lanes GT and TG). Since Northern blot
analysis reveals that the TLTF gene is expressed as a single
1.8-kilobase mRNA in both insect form and bloodstream form
parasites (Fig. 1B), we were surprised to see
cross-reactivity to the smaller (41-kDa) protein in Western blots. A
13-kDa difference in protein molecular weight (54 versus 41 kDa) corresponds to an mRNA size difference of approximately 350 nt, which would be readily detected by Northern blot analysis. Hence,
the 41-kDa protein is not simply the product of a truncated TLTF
mRNA. Rather, this protein is either encoded by a separate gene or
is derived from the 54-kDa protein through post-translational processing.
Since trypanosome proteins that are developmentally regulated are
usually important for survival of the parasite in a particular host
environment, we considered the possibility that the 41-kDa protein
might arise through developmental stage-specific processing of the
54-kDa protein. We set out to conduct a pulse-chase experiment to
determine whether the 54-kDa protein could be pulse-labeled in
vivo and then processed into the 41-kDa protein over time. Unfortunately, despite the fact that affinity-purified -TLTF-TT1 antibodies readily immunoprecipitate the 35S-labeled 54-kDa
protein, they do not immunoprecipitate the 41-kDa protein (Fig.
2A, lane
1). Western blot analysis of the supernatant from this
immunoprecipitation confirms that the 41-kDa protein remains in the
supernatant and is not degraded during the experiment (Fig.
2B). The fact that neither the 54-kDa protein nor any rabbit -TLTF-TT1 IgG heavy chain is detected by the anti-rabbit secondary antibody used for this Western blot (Fig. 2B) demonstrates
that the immunoprecipitation is quantitative.

View larger version (30K):
[in this window]
[in a new window]
|
Fig. 2.
A developmentally regulated 41-kDa protein
cross-reacts with -TLTF-TT1 antibodies but is
not derived from TLTF. A, immunoprecipitation of TLTF
from trypanosomes stably expressing GFP. Cells were labeled with
[35S]methionine/cysteine for 3 h.
35S-labeled proteins were immunoprecipitated with
affinity-purified -TLTF-TT1 (lane 1), -GFP
(lane 2), or no antibody (lane
3). Immunoprecipitated proteins were separated by SDS-PAGE
and visualized by fluorography. B, Western blot analysis of
the supernatant from sample 1 of A was performed using
affinity-purified -TLTF-TT1 antibody. The presence of the 41-kDa
protein in the supernatant of this immunoprecipitation reaction
confirms that this protein was not degraded during the experiment.
C, Western blot analysis of total protein extracts from wild
type trypanosomes (lane 1) or trypanosomes
engineered to overexpress the TLTF open reading frame (lane
2). Proteins were separated by SDS-PAGE and subjected to
Western blot analysis using affinity-purified -TLTF-TT1 antibody.
D, Western blot analysis of total protein extracts from wild
type trypanosomes. Affinity-purified -TLTF-TT4, -TLTF-TT1, or
-TLTF-Pep4 was used as indicated. These antibodies were raised
against the N-terminal 145 amino acids of TLTF (TT4), full-length TLTF
(TT1), or the C-terminal 14 amino acids of TLTF (Pep4) and
affinity-purified as described under "Experimental Procedures." The
sizes and positions of prestained protein molecular mass standards are
indicated. Black arrowhead, TLTF; open
arrowhead, 41-kDa -TLTF-TT1 cross-reactive protein;
open arrow, GFP.
|
|
Since we were unable to use pulse-chase experiments to determine
whether the 41-kDa protein is derived from the 54-kDa protein, we took
the alternative approach of generating trypanosome cells that
overexpress the TLTF open reading frame. Western blots of protein
extracts from these TLTF overexpressors show a dramatic increase in the
amount of 54-kDa protein, with no corresponding increase in the
abundance of the 41-kDa protein (Fig. 2C). Furthermore, -TLTF antisera raised against either the N-terminal ( -TLTF-TT4) or C-terminal ( -TLTF-Pep4) portion of TLTF recognize the 54-kDa protein but not the 41-kDa protein (Fig. 2D). Based on these
results, we conclude that the 54-kDa protein is TLTF and that the
41-kDa protein most likely is a protein that is distinct from TLTF but has an epitope that is shared with TLTF.
TLTF Is Associated with the Trypanosome Cytoskeleton--
When
total cell extracts from hypotonically lysed trypanosomes are
centrifuged at 1000 × g, the vast majority of cellular proteins, including proteins that serve as markers for the endoplasmic reticulum (BiP; binding protein; Ref. 26) and
cytoplasm (Hsp70; heat shock
protein 70; Ref. 32) are released into the supernatant (Fig. 3, A-C) as has been
reported previously (26). Since trypanosome microtubules and associated
proteins are highly resistant to physical and chemical disruption (30),
they are expected to sediment under these conditions. Hence, the major
protein of about 55 kDa seen in the Coomassie-stained P1 sample (Fig.
3A) most likely corresponds to tubulin. Western blots probed
with a monoclonal antibody directed against -tubulin confirm that
microtubules remain in the 1000 × g pellet (Fig.
3D, lane P1). Contrary to most
cellular proteins (Fig. 1, A-C), both TLTF and the 41-kDa protein co-sediment with microtubules in these experiments (Fig. 3E). TLTF behaves somewhat differently than the 41-kDa
protein, since TLTF is quantitatively pelleted, whereas a small amount of the 41-kDa protein remains in the supernatant. Although this difference is slight, it was consistently observed in several experiments (not shown). In addition to the microtubule cytoskeleton, the low speed pellet obtained here is expected to contain nuclei and
mitochondria (32) as well as large fragments of surface membrane and
unlysed cells. The nearly complete release of endoplasmic reticulum
(BiP), and cytoplasmic (Hsp70) marker proteins, as well as microscopic
examination of the P1 pellet (not shown) demonstrates that cell lysis
is essentially complete.

View larger version (42K):
[in this window]
[in a new window]
|
Fig. 3.
TLTF is associated with the
membrane/cytoskeleton fraction of protein extracts prepared by
hypotonic lysis. Total protein extracts from wild type
trypanosomes were prepared by hypotonic lysis and subjected to
centrifugation at 1000 × g. The crude lysate
(L), 1000 × g supernatant (S1),
and pellet (P1) were separated by SDS-PAGE, stained with
Coomassie Blue (A), or subjected to Western blot analysis
(B-E) using antibodies directed against the indicated
proteins (B-D), or -TLTF-TT1 (E). The
position of TLTF and the 41-kDa protein are indicated with
black and open arrowheads,
respectively. BiP and Hsp70 are marker proteins for the
endoplasmic reticulum (26) and cytoplasm (32), respectively, and serve
as controls to demonstrate that cell lysis is essentially complete. The
sizes and positions of prestained protein molecular mass standards are
indicated.
|
|
Since the biochemical fractionation of TLTF is consistent with that of
a cytoskeletal protein, we tested this possibility directly by
isolating intact trypanosome cytoskeletons and examining these
preparations for the presence of TLTF. Robinson et al. (30) have exploited the stability and organization of trypanosome
microtubules to develop a procedure for isolating intact cytoskeletons.
In this procedure, cellular membranes are removed by extraction with nonionic detergents in the presence of a Ca2+-chelating
agent. Under these conditions, the cytoskeleton remains intact and can
be isolated by low speed (1000 × g) centrifugation. This isolated cytoskeleton has the same shape and organization observed
in intact cells and retains its major structural components (microtubules and the paraflagellar rod) (12) plus a variety of less
abundant cytoskeleton-associated/microtubule-associated proteins (4).
We find that TLTF remains quantitatively associated with intact,
detergent-extracted cytoskeletons (Fig.
4, lane P1). As
expected (30), nearly all cellular tubulin remains polymerized and
therefore sediments at 1000 × g (Fig. 4,
lane P1), demonstrating the resistance of the
microtubule-based cytoskeleton to this treatment. Unlike TLTF, the
41-kDa protein is released into the supernatant by detergent extraction
(Fig. 4, lane S1), indicating that this protein
interacts with the membrane in the hypotonic P1 pellet (Fig.
3E), whereas TLTF interacts with the cytoskeleton.

View larger version (52K):
[in this window]
[in a new window]
|
Fig. 4.
TLTF is a component of the flagellar fraction
of the trypanosome cytoskeleton. To isolate intact trypanosome
cytoskeletons, whole cell lysates were prepared by extraction with 1%
Nonidet P-40 as described under "Experimental Procedures." Intact
cytoskeletons (P1) were separated from detergent-soluble
proteins (S1) by centrifugation at 1000 × g. These detergent-extracted cytoskeletons (P1)
were further incubated with 3 mM CaCl2 to
depolymerize the subpellicular cytoskeleton (30), leaving the flagellar
microtubules and associated structures intact (see "Experimental
Procedures"). The Ca2+-resistant flagellar fraction
(P2) was separated from Ca2+-soluble proteins
(S2) by centrifugation at 16,000 × g. All
samples were separated by SDS-PAGE and subjected to Western blot
analysis using antibodies against the indicated proteins. For the
top panel, the antibody used was -TLTF-TT1,
and the positions of TLTF and the 41-kDa protein are indicated with
black and open arrowheads,
respectively. The sizes and positions of prestained protein molecular
mass standards are indicated.
|
|
TLTF Remains Associated with the Flagellar Fraction of the
Cytoskeleton after Depolymerization of Subpellicular Microtubules with
Ca2+--
The two most prominent features of the
trypanosome cytoskeleton are the flagellar apparatus and the
subpellicular microtubule corset (12). The flagellum contains a
classical set of "9 + 2" axoneme microtubules attached to a
filamentous structure called the paraflagellar rod (33). The
subpellicular microtubule corset is a highly ordered, helical array of
parallel microtubules that run parallel to the long axis of the cell
and are cross-linked to the plasma membrane (pellicle) (4, 6). These
subpellicular microtubules can be selectively depolymerized by treating
detergent-extracted cytoskeletons with Ca2+ or high salt
concentrations (30), leaving the flagellar axoneme, paraflagellar rod,
and a subset of cytoplasmic cytoskeletal structures (Ref. 34; see Fig.
7) intact. This detergent-resistant and Ca2+-resistant
"flagellar fraction" can then be separated from the solubilized
subpellicular cytoskeleton by centrifugation (30).
Upon depolymerization of the subpellicular microtubules, we find that
100% of TLTF remains associated with the flagellar fraction, even
after extensive washing with 3 mM CaCl2 and 1%
Nonidet P-40 (Fig. 4, lane P2). The release of
50-60% of tubulin into the soluble fraction (Fig. 4, lane
S2) is consistent with earlier reports (35) and, together
with microscopic examination of the flagellar fraction (not shown),
demonstrates that Ca2+ extraction was effective at
depolymerizing the subpellicular microtubules. These results
demonstrate that TLTF's association with the cytoskeleton does not
require intact subpellicular microtubules and indicate that TLTF is
part of the subset of flagellum-associated cytoskeletal structures that
are resistant to detergent and Ca2+ extraction (see below)
(2, 34).
Subcellular Location of TLTF--
We previously showed that a
TLTF-GFP fusion protein is localized to small spots within the cell
that are concentrated in the vicinity of the flagellar pocket (15).
Deletion analysis of TLTF identified an internal 144-amino acid
targeting domain (amino acids 114-257) that directs GFP to an
electron-dense structure on the cytoplasmic side of the anterior
flagellar pocket membrane (17). Mutations in this domain misdirect GFP
to the cytoplasm or into the flagellum (17). To follow up on these GFP
studies, we conducted immunofluorescence experiments using three
different rabbit polyclonal antisera directed against TLTF. Antibodies
-TLTF-TT1 and -TLTF-TT4 were raised against thioredoxin fusion
proteins containing either full-length TLTF (TT1) or the first 145 amino acids of TLTF (TT4) (15). A third antibody, -TLTF-Pep4, was raised against the C-terminal 14 amino acids of TLTF (see
"Experimental Procedures"). Each of these antibodies was
affinity-purified (see "Experimental Procedures") and shown to
recognize TLTF in total protein extracts from wild type trypanosomes
(Figs. 1 and 2), as well as purified, His-tagged TLTF (not shown).
Despite the specificity and high titer of these independent
preparations of -TLTF antibodies in Western blots, our efforts to
use them for immunofluorescence have been unsuccessful. We have
conducted an exhaustive and systematic comparison of fixation, permeabilization, and blocking agents as well as a wide range of
antibody dilutions, incubation times, and temperatures (Table I). We have also used 0.5% SDS treatment
in an effort to expose obscured epitopes and have employed whole cells,
cytoskeletons, and isolated flagella as starting material. Primary
antibodies against tubulin (25) and CRAM
(cysteine-rich acidic
membrane protein) (36), used as positive controls
for immunofluorescence, show the expected staining patterns (not
shown). A TLTF-null trypanosome cell
line2 was used as a negative
control in these experiments. In all immunofluorescence experiments
conducted thus far, none of the three TLTF antibody preparations give a
signal above the background seen with TLTF-null trypanosomes. Rather,
these antibodies give either no signal or a background signal
consisting of spots of fluorescence along the flagellar cytoskeleton,
which is also seen with preimmune sera from a variety of nonimmunized
rabbits and mice (not shown). The presence of trypanosome cytoskeleton
cross-reactive antibodies in naive animals has also been reported by
others (37). Based on these results, we suspect that TLTF may be
tightly associated with other cytoskeletal proteins and is inaccessible
to our antibodies under the immunofluorescence conditions employed.
This possibility is supported by our biochemical fractionation data
(Figs. 3 and 4) and is consistent with the observation that the TLTF
amino acid sequence is predicted to form multiple coiled-coils (17), which mediate protein-protein interactions and are common features of
other cytoskeletal proteins (33, 38).
View this table:
[in this window]
[in a new window]
|
Table I
Conditions used for immunofluorescence with -TLTF antibodies
Antibodies were raised in rabbits, affinity-purified, and used for
immunofluorescence as described under "Experimental Procedures."
The TLTF amino acids (aa) included in the antigens used for preparation
of each antiserum are indicated in parentheses. Antibodies were used
undiluted or at dilutions of 1:10 through 1:1000 (TT1 and TT4) or 1:10
through 1:3000 (Pep4). Primary antibody incubation times ranged from 30 min at room temperature to 24 h at 4 °C. Trypanosome
cytoskeletons and isolated flagella were prepared as described under
"Experimental Procedures." Fixations containing methanol were done
for 20 min at 20 °C. All other fixations were done for both 30 and
60 min at room temperature. Blocking incubations ranged from 30 min at
room temperature to 24 h at 4 °C. Permeabilizing and quenching
agents were employed for samples fixed with aldehyde reagents. SDS
treatments were done for 5 min at room temperature in PBS after
fixation and samples were blocked after SDS treatment.
|
|
TLTF-like Genes Are Present in a Wide Variety of
Organisms--
BLAST searches of DNA data bases identified a human EST
and a mouse cDNA that encode nearly identical proteins with
extensive sequence similarity (60%) to TLTF (15). The mouse gene was
isolated in a screen for genes that are up-regulated in growth-arrested cells and is designated as Gas11 (growth
arrest-specific gene 11).3 The
corresponding human GAS11 gene was recently implicated by Whitmore et al. (40) as a candidate tumor suppressor, since its deletion is commonly associated with breast and prostate cancers. Using the TLTF amino acid sequence to perform BLAST searches, we have
now identified partial length genes for TLTF-like proteins in the
nucleotide data bases for zebrafish, Trypanosoma cruzi, Schistosoma mansoni, Drosophila melanogaster, and
Chlamydomonas reinhardtii (Fig.
5). Notably, we have not identified any
TLTF sequences in the Saccharomyces cerevisiae genome.
Alignment of these partial-length TLTF-like proteins, which correspond
to TLTF amino acids 33-247 (Fig. 5A) and 269-429 (Fig.
5B), reveals several regions of highly conserved amino acid
sequence. Aside from a few candidate phosphorylation and glycosylation
sites (not shown), these proteins contain no previously identified
sequence motifs. They are, however, all predicted to have extensive
-helical secondary structures and to form multiple coiled-coils (38,
41).

View larger version (79K):
[in this window]
[in a new window]
|
Fig. 5.
Multiple sequence alignment of TLTF and
TLTF-related proteins from other organisms. A,
alignment of amino acids 33-247 of TLTF from T. brucei
(Tb) and the corresponding sequences of related proteins
from humans (Hs), zebrafish (Dr), S. mansoni (Sm), D. melanogaster
(Dm), and T. cruzi (Tc). Amino acids
that are identical in three or more proteins are shaded
dark gray, and conservative substitutions are
shaded light gray.
Asterisks mark positions that are identical in all proteins
for which the sequence is known. Numbering is based on the full-length
TLTF amino acid sequence (15). B, alignment of amino acids
269-429 of TLTF from T. brucei (Tb) and the
corresponding sequences of related proteins from humans (Hs)
and C. reinhardtii (Cr). Amino acids that are
identical in two or more proteins are shaded dark
gray, and conservative substitutions are shaded
light gray. Asterisks mark positions
that are identical in all proteins for which the sequence is known.
Numbering is based on the full-length TLTF amino acid sequence (15).
Complete sequences are known only for the T. brucei (15) and
human (40) proteins. The sequences of these full-length proteins are
34% identical and 60% similar (not shown). Also not shown is a mouse
protein that is 87% identical to the human protein (15). DNA sequences
encoding partial TLTF-like proteins were identified by BLAST searches
of the GenBankTM nonredundant and dbEST data bases.
Accession numbers for these sequences are as follows: zebrafish
(AI584969), T. cruzi (AQ444061), D. melanogaster
(AAF45877), schistosomes (AI067540), and C. reinhardtii
(BE056668). Amino acid sequence alignments were done using the multiple
sequence alignment algorithm of the Wisconsin GCG sequence analysis
software package.
|
|
The Human TLTF-like Protein Contains a Novel Microtubule-binding
Domain--
In the protein alignments shown in Fig. 5A, it
is noteworthy that the previously identified flagellar pocket targeting
domain of TLTF (amino acids 114-257) (17) is 70% identical to the
corresponding sequence that is known for the T. cruzi
protein (amino acids 116-247). As we reported previously, the last
half of this targeting domain corresponds to one of the most conserved
regions between TLTF and the human GAS11 protein (17). Our finding that
TLTF is a component of trypanosome cytoskeleton suggests that some of
the conserved amino acids in GAS11 might correspond to sequences that interact with the cytoskeleton in mammalian cells. This possibility is
consistent with our earlier observation that GAS11 amino acids 115-258, which are analogous to the TLTF targeting domain (17), direct
a GFP fusion protein to the extreme posterior of the trypanosome cell
(17), a position that corresponds to the plus-ends of the trypanosome's cytoplasmic microtubules (6). To determine whether GAS11
amino acids 115-258 interact with mammalian microtubules, we expressed
this same fusion protein in mammalian cells and found it to colocalize
precisely with microtubules (Fig. 6).
This localization pattern is stable to detergent extraction, as
expected for a microtubule-binding protein (24), and is disrupted by
the microtubule-destabilizing agent, nocodazole (Fig. 6I).
The punctate distribution of GAS11-(115-258)-GFP along a subset
of microtubules is strikingly similar to that seen for CLIP-170 (24), a
"cytoplasmic linker protein"
that links subcellular organelles to microtubules and has been
implicated in regulating the assembly of microtubules at their plus-end
(42-44).

View larger version (52K):
[in this window]
[in a new window]
|
Fig. 6.
The human TLTF-like protein (GAS11) contains
a domain that co-localizes with microtubules in mammalian cells.
COS-7 cells were transfected with a plasmid encoding a GFP fusion
protein containing amino acids 115-258 of the human GAS11 protein
(Fig. 5) and subjected to immunofluorescence using a monoclonal
antibody against -tubulin as described under "Experimental
Procedures." Cells were untreated (A-H) or treated
(I) with 10 µM nocodazole for 4 h prior
to fixation and immunofluorescence. Cells in A-H were
extracted with 0.5% Triton X-100 prior to fixation. Cells were
examined by laser-scanning confocal fluorescence microscopy.
Fluorescent images of GFP (A and D) or tubulin
(B and E) were captured on separate channels and
then merged (C, F, and G-I).
Note that these cells were transiently transfected; hence, not all
tubulin-stained cells express GFP. H shows an enlargement of
the boxed region in G. The GAS11-GFP
fusion protein exhibits a punctate distribution along a subset of
microtubules and tends to accumulate at microtubule ends or gaps
(e.g. arrowheads in H).
|
|
 |
DISCUSSION |
The trypanosome cytoskeleton is distinguished from that of most
eukaryotic cells by the fact that it does not contain any detectable
trans-cellular filaments and is composed almost entirely of
microtubules and microtubule-associated proteins (4). In contrast to
the major microtubule subunits ( - and -tubulin), which have been
well characterized (4), relatively little is known about
microtubule-associated/cytoskeleton-associated proteins in
trypanosomes. Given the importance of these proteins in contributing to
the unique properties of the trypanosome cytoskeleton (1, 2), this lack
of information represents a critical gap in our understanding of
trypanosome cell biology. In the present work, we report that TLTF from
T. brucei is a 54-kDa cytoskeleton-associated protein. TLTF
remains tightly associated with the trypanosome cytoskeleton after
removal of cellular membranes by extraction with nonionic detergents.
Moreover, TLTF remains exclusively with the flagellar fraction of the
cytoskeleton after depolymerization of the subpellicular microtubules
with Ca2+ (Fig. 4, lane P2).
Approximately 50-60% of cellular tubulin (Fig. 4, lane
S2), together with other proteins of the subpellicular cytoskeleton (30), is solubilized by Ca2+, demonstrating
that the association of TLTF with the cytoskeleton is not due to a
nonspecific interaction with microtubules.
In addition to the flagellar axoneme, the other predominant structure
in the flagellum is the paraflagellar rod (PFR), a lattice-like filament composed of two major protein subunits, PFR-A and PFR-C (2).
The PFR is contained within the flagellar membrane and is attached to
axoneme by filamentous cross-links (Refs. 2 and 12; Fig.
7). The flagellum is attached to the
cytoplasmic cytoskeleton in a flagellum attachment zone that
runs from the flagellar pocket to the anterior end of the cell (Refs.
1, 2, and 12; Fig. 7). The cytoplasmic side of the flagellum attachment
zone is defined by an electron-dense "FAZ filament" that originates
at the anterior side of the flagellar pocket and extends to the
anterior end of the cell (Fig. 7). Immediately adjacent to the FAZ
filament is a quartet of specialized microtubules, which, unlike other
microtubules of the subpellicular corset, do not extend to the
posterior side of the flagellar pocket (3). These four microtubules are
further distinguished by their association with a membranous tubule
(12). The PFR, FAZ filament, and quartet of reticulum-associated
microtubules remain intact and attached to the flagellum after
detergent and Ca2+ extraction (12), as does a "tripartite
attachment complex" that links the flagellar basal body apparatus
with the kinetoplast (2, 5). Our data indicate that TLTF is a component
of one of these Ca2+-resistant, flagellum-associated
cytoskeletal complexes. Together, these complexes function in several
fundamental cellular activities, including cell motility, cytokinesis,
and organelle inheritance (2). Since immunofluorescence studies have
not allowed us to distinguish between these possible functions for
TLTF, we are currently working to determine whether disruption of TLTF
gene expression compromises any of these processes.

View larger version (147K):
[in this window]
[in a new window]
|
Fig. 7.
Schematic illustrations of a trypanosome
cell, emphasizing the structural components of the cytoskeleton.
A, detergent-extracted cytoskeleton. The flagellum
(1) and subpellicular microtubules (2) are
labeled. The subpellicular microtubules are uniformly oriented with
their plus-ends at the posterior of the cell (+) and their minus-ends
at the anterior ( ) of the cell (6). B, idealized
transverse section taken through the midpoint of the cell, looking from
posterior to anterior. The flagellum (top) contains a
typical set of "9 + 2" axoneme microtubules (7) together
with a filamentous structure called the PFR (6). The PFR is
connected to the axoneme and to an electron-dense filament
(5) in the cytoplasm by regularly spaced cross-bridges.
Immediately adjacent to this cytoplasmic filament is a specialized
quartet of microtubules (3) that are subtended by a
membranous tubule (4). These reticulum-associated
microtubules, together with the cytoplasmic filament (5),
make up a FAZ that runs from the flagellar pocket to the anterior end
of the cell (2). C, cut-out view of the flagellar pocket
area, emphasizing the cytoskeletal structures discussed in the
Introduction and under "Results" and "Discussion." The
flagellar pocket (9) is formed by an invagination of the
plasma membrane where the flagellum emerges from the basal body complex
(8). The plasma membrane and flagellar membrane are held in
close juxtaposition by electron-dense adhesion zones (10).
The cytoplasmic components of the flagellum attachment zone
(3, 4, and 5) extend from the
flagellar pocket to the anterior end of the cell. Most subpellicular
microtubules (4) extend the entire length of the cell. However, the
specialized quartet of FAZ microtubules (3) does not extend
to the posterior side of the flagellar pocket. Although the precise
location of the ends of these four microtubules is not known, they
might originate from the basal body complex (dashed
lines), which would give them an inverse orientation
relative to the other subpellicular microtubules (2). This
quartet of microtubules, together with the axoneme, paraflagellar rod,
FAZ filament, and basal body complex, are resistant to detergent and
Ca2+ extraction (30, 34) and comprise the flagellar
fraction seen in lane P2 of Fig. 4. The
arrow points to the position of a GFP fusion protein
containing a minimal TLTF targeting domain of amino acids 114-257, as
determined by immunoelectron microscopy (17). These illustrations are
based on our observations, as well as the published electron microscopy
studies of K. Vickerman (39) and K. Gull (12). 1, flagellum;
2, subpellicular microtubules; 3, special quartet
of reticulum-associated microtubules; 4,
microtubule-associated reticulum; 5, flagellum attachment
zone (FAZ) filament; 6, PFR; 7, axoneme;
8, basal body complex; 9, flagellar pocket;
10, adhesion zones.
|
|
Western blot analysis of total trypanosome protein extracts with
-TLTF-TT1 antibodies detected a 41-kDa protein that is present in
procyclic trypanosomes and absent in bloodstream parasites (Fig.
1A). Although this 41-kDa protein is distinct from TLTF, it
appears to share an epitope with TLTF that is recognized by some,
although not all, -TLTF antibodies in Western blots (Figs. 1-5).
Since this 41-kDa protein is not recognized by antibodies directed
against either the N-terminal 145 amino acids (TT4) or the C-terminal
14 amino acids (Pep4) of TLTF, this shared epitope most likely occurs
within amino acids 141 and 439 of TLTF. The developmental
stage-specific expression of this 41-kDa protein suggests that it
functions in a process that is specific to procyclic trypanosomes in
the insect host environment.
Comparison with Other Cytoskeleton-associated Proteins from T. brucei--
Over the last several years, other nontubulin cytoskeletal
proteins have been identified in T. brucei (4). Many,
although not all (e.g. see Ref. 45), of these proteins are
associated with the subpellicular cytoskeleton, rather than with the
flagellar fraction of the cytoskeleton. A general feature of these
proteins is that they are usually quite large (molecular mass 120
kDa) and possess highly repetitive amino acid sequences. Balaban
et al. (13) employed biochemical fractionation to isolate an
unidentified 52-kDa protein that co-purifies with intact trypanosome
cytoskeletons and induces microtubule bundling in vitro.
While similar in mass to TLTF, this 52-kDa protein is released from the
cytoskeleton by depolymerization of the subpellicular cytoskeleton and
is therefore distinct from TLTF.
Additional T. brucei cytoskeletal proteins have been
detected using antibodies raised against whole cytoskeletons (14). While the functions and identities of most of these proteins remain to
be determined, most are quite large (molecular mass 120 kDa) and are
usually associated with the subpellicular cytoskeleton or, in some
cases, the flagellum/flagellum attachment zone (14). One exception is
the BBA4 antigen, which exhibits a punctate localization at the
flagellar basal body apparatus (14). This localization pattern is
similar to what we see for a TLTF-GFP fusion protein (15, 17) and is
also observed for TBBC, another coiled-coil protein of T. brucei (45). Interestingly, TBBC was originally isolated using
antibodies directed against an immunosuppressive factor from T. brucei (45). This is reminiscent of our initial studies with TLTF,
which was first isolated on the basis of its immunomodulatory activity
(15, 46). Although recombinant TLTF is capable of stimulating T cells
(15), such an activity seems to be at odds with its intracellular
association with the trypanosome cytoskeleton. While this apparent
discrepancy remains to be resolved, the coincidental finding of another
coiled-coil cytoskeletal protein (i.e. TBBC) that is
antigenically related to an immunomodulatory protein may suggest a
general feature of these proteins. Perhaps the ability of TLTF to
activate T cells is related to the presence of coiled-coil domains and
the general capacity of cytoskeletal proteins to engage in higher order
protein-protein complexes. Alternatively, perhaps the apparent
multiplicity of functions ascribed to TLTF stems from the presence of
other trypanosome proteins with epitopes that are related to TLTF
(e.g. see Fig. 1A).
TLTF is distinguished from most cytoskeletal proteins thus far
identified in T. brucei, since it is small by comparison and lacks the multiple direct repeats often seen in these proteins. However, TLTF is predicted to contain extensive -helical secondary structure and to form multiple coiled-coils (17), both of which are
common features of cytoskeletal proteins in trypanosomes (33) and in
other organisms (38). Supporting this observation is the fact that
PSI-BLAST (47) searches of GenBankTM identify several
myosin sequences as having TLTF alignment E (expect)
values that exceed the threshold (not shown).
A Candidate Human Tumor Suppressor Is Related to TLTF and Contains
a Domain That Co-localizes with Microtubules in Mammalian
Cells--
The mammalian growth arrest-specific protein, GAS11, has
extensive sequence similarity to TLTF (Fig. 5) (15, 17). The human
GAS11 gene is expressed in a variety of human tissues
(40)2 and is located on chromosome 16, in a region
(16q24.3) whose deletion is associated with breast and prostate cancer
(40). Although a role in breast cancer has now been ruled out,
GAS11 remains a candidate tumor suppressor gene for prostate
cancer (40). The important role played by the cytoskeleton in
preventing uncontrolled growth of tumors is evidenced by the growing
number of anti-cancer drugs that act by stabilizing microtubules (48). Our finding that TLTF is a component of the trypanosome cytoskeleton makes it tempting to speculate that GAS11 plays a role in the organization and/or function of the cytoskeleton in mammalian cells.
Consistent with this possibility, human GAS11 contains a domain that
directs a GFP fusion protein to the plus-end of microtubules in
trypanosomes (17). This same fusion protein co-localizes precisely with
microtubules in mammalian cells (Fig. 6). Whether this co-localization
is through direct or indirect interaction with microtubules remains to
be determined. Interestingly, the GAS11-(115-258)-GFP fusion protein
does not decorate all microtubules and tends to be localized to ends or
gaps in microtubules (arrowheads in Fig. 6H).
This patchy distribution along a subset of microtubules is distinct
from what is observed for microtubule-associated proteins such as Tau
and MAP2c (49) but is very reminiscent of the localization pattern
exhibited by the N-terminal microtubule-binding domain of CLIP-170,
which directs GFP to the plus-end of microtubules in mammalian cells
(24, 42). CLIP-170 is a cytoplasmic linker protein implicated in
regulating dynamic assembly of microtubules (43). Growth
arrest-specific genes have been implicated a variety of functions,
including down-regulation of cell growth (50) and organization of the
actin cytoskeleton (51). Since the cytoskeleton plays a central role in
controlling cell growth, a cytoskeletal milieu for GAS11 is consistent
with its up-regulation in growth-arrested cells.3
The TLTF-related sequences in genome data bases of mice (15), humans,
zebrafish, T. cruzi, S. mansoni, D. melanogaster, and C. reinhardtii (Fig. 5) contain long
stretches of nearly identical amino acid sequences but possess enough
differences to suggest that they are distinct proteins and may have
related but not identical functions. Likewise, the insect form-specific
41-kDa protein of T. brucei that contains a shared epitope
with TLTF, within residues 141-439, might fall into this group of
proteins. Hence, our results indicate that TLTF is the founding member
of a new family of cytoskeletal proteins present in organisms as
diverse as protozoa and humans. Repeated searches of the S. cerevisiae genome data base have not revealed any TLTF-like genes,
perhaps reflecting a fundamental difference in the cytoskeleton
organization of budding yeast compared with trypanosome and mammalian cells.
 |
ACKNOWLEDGEMENTS |
We are grateful to Dr. J. D. Bangs
(University of Wisconsin at Madison) for providing antibodies against
BiP and Hsp70 and to Dr. Mary Gwo-Shu Lee (New York University) for
antibodies against CRAM. We are grateful to Dr. Rachelle H. Crosbie (UCLA) for assistance with the preparation of anti-peptide antibodies.
 |
FOOTNOTES |
*
This work was supported in part by National Institutes of
Health (NIH) Research Grant AI40591 (to J. E. D.) and an Individual National Research Service Award Grant AI07511 (to K. L. H.). This work was also supported by the University of Iowa Diabetes and Endocrinology Research Center (NIH Grant DK25295).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
To whom correspondence should be addressed: Depts. of Microbiology
and Immunology and of Microbiology and Molecular Genetics, UCLA, 10833 Le Conte Ave., Los Angeles, CA 90095. Tel.: 310-267-0546. Fax:
310-206-3865; E-mail: kenthill@mednet.ucla.edu.
Supported by NIH Genetics Training Grant GM08629.
Published, JBC Papers in Press, August 31, 2000, DOI 10.1074/jbc.M006907200
2
K. L. Hill and J. E. Donelson,
unpublished data.
3
A. C. Y. Chang, S. Lin-Chao, A. Yarden, and S. N. Cohen, GenBankTM accession number
U19859.
 |
ABBREVIATIONS |
The abbreviations used are:
FAZ, flagellum
attachment zone;
GFP, green fluorescent protein;
TLTF, T
lymphocyte-triggering factor;
PBS, phosphate-buffered saline;
bp, base pair(s);
nt, nucleotide(s);
CRAM, cysteine-rich
acidic membrane protein;
PFR, paraflagellar rod;
PAGE, polyacrylamide
gel electrophoresis.
 |
REFERENCES |
| 1.
|
Seebeck, T.,
Hemphill, A.,
and Lawson, D.
(1990)
Parasitol. Today
6,
49-52
|
| 2.
|
Gull, K.
(1999)
Annu. Rev. Microbiol.
53,
629-655
|
| 3.
|
Balber, A. E.
(1990)
Critical Rev. Immunol.
10,
177-201
|
| 4.
|
Kohl, L.,
and Gull, K.
(1998)
Mol. Biochem. Parasitol.
93,
1-9
|
| 5.
|
Robinson, D. R.,
and Gull, K.
(1991)
Nature
352,
731-733
|
| 6.
|
Robinson, D. R.,
Sherwin, T.,
Ploubidou, A.,
Byard, E. H.,
and Gull, K.
(1995)
J. Cell Biol.
128,
1163-1172
|
| 7.
|
Ngo, H.,
Tschudi, C.,
Gull, K.,
and Ullu, E.
(1998)
Proc. Natl. Acad. Sci. U. S. A.
95,
14687-14692
|
| 8.
|
Bastin, P.,
Sherwin, T.,
and Gull, K.
(1998)
Nature
391,
548
|
| 9.
|
Schneider, A.,
Hemphill, A.,
Wyler, T.,
and Seebeck, T.
(1988)
Science
241,
459-462
|
| 10.
|
Schneider, A.,
Plessmann, U.,
and Weber, K.
(1997)
J. Cell Sci.
110,
431-437
|
| 11.
|
MacRae, T. H.,
and Gull, K.
(1990)
Biochem. J.
265,
87-93
|
| 12.
|
Sherwin, T.,
and Gull, K.
(1989)
Philos. Trans. R. Soc. Lond.-Biol. Sci.
323,
573-588
|
| 13.
|
Balaban, N.,
Waithaka, H. K.,
Njogu, A. R.,
and Goldman, R.
(1989)
Cell Motil. Cytoskel.
14,
393-400
|
| 14.
|
Woods, A.,
Sherwin, T.,
Sasse, R.,
MacRae, T. H.,
Baines, A. J.,
and Gull, K.
(1989)
J. Cell Sci.
93,
491-500
|
| 15.
|
Vaidya, T.,
Bakhiet, M.,
Hill, K. L.,
Olsson, T.,
Kristensson, K.,
and Donelson, J. E.
(1997)
J. Exp. Med.
186,
433-438
|
| 16.
|
Webster, P.,
and Russell, D. G.
(1993)
Parasitol. Today
9,
201-206
|
| 17.
|
Hill, K. L.,
Hutchings, N. R.,
Russell, D. G.,
and Donelson, J. E.
(1999)
J. Cell Sci.
112,
3091-3101
|
| 18.
|
Hemphill, A.,
Lawson, D.,
and Seebeck, T.
(1991)
J. Parasitol.
77,
603-612
|
| 19.
|
Kim, K. S.,
and Donelson, J. E.
(1997)
J. Biol. Chem.
272,
24637-24645
|
| 20.
|
Lanham, S. M.,
and Godfrey, D. G.
(1970)
Exp. Parasitol.
28,
521-534
|
| 21.
|
Biebinger, S.,
Rettenmaier, S.,
Flaspohler, J.,
Hartmann, C.,
Pena-Diaz, J.,
Wirtz, L. E.,
Hotz, H. R.,
Barry, J. D.,
and Clayton, C.
(1996)
Nucleic Acids Res.
24,
1202-1211
|
| 22.
|
Hill, K. L.,
Li, H. H.,
Singer, J.,
and Merchant, S.
(1991)
J. Biol. Chem.
266,
15060-15067
|
| 23.
|
Tellam, J. T.,
James, D. E.,
Stevens, T. H.,
and Piper, R. C.
(1997)
J. Biol. Chem.
272,
6187-6193
|
| 24.
|
Rickard, J. E.,
and Kreis, T. E.
(1990)
J. Cell Biol.
110,
1623-1633
|
| 25.
|
Chu, D. T.,
and Klymkowsky, M. W.
(1989)
Dev. Biol.
136,
104-117
|
| 26.
|
Bangs, J. D.,
Uyetake, L.,
Brickman, M. J.,
Balber, A. E.,
and Boothroyd, J. C.
(1993)
J. Cell Sci.
105,
1101-1113
|
| 27.
|
McDowell, M. A.,
Ransom, D. M.,
and Bangs, J. D.
(1998)
Biochem. J.
335,
681-689
|
| 28.
|
Bangs, J. D.,
Brouch, E. M.,
Ransom, D. M.,
and Roggy, J. L.
(1996)
J. Biol. Chem.
271,
18387-18393
|
| 29.
|
Hill, K. L.,
Catlett, N. L.,
and Weisman, L. S.
(1996)
J. Cell Biol.
135,
1535-1549
|
| 30.
|
Robinson, D.,
Beattie, P.,
Sherwin, T.,
and Gull, K.
(1991)
Methods Enzymol.
196,
285-299
|
| 31.
|
Coligan, J. E., Kruisbeek, A. M., Marbulies, D. H., Shevach, E. M., and Strober, W.
(eds)
(1995)
Current Protocols in Immunology
, Vol. 2
, John Wiley & Sons, Inc., New York
|
| 32.
|
Roggy, J. L.,
and Bangs, J. D.
(1999)
Mol. Biochem. Parasitol.
98,
1-15
|
| 33.
|
Bastin, P.,
Matthews, K. R.,
and Gull, K.
(1996)
Parasitol. Today
12,
302-307
|
| 34.
|
Scott, V.,
Sherwin, T.,
and Gull, K.
(1997)
J. Cell Sci.
110,
157-168
|
| 35.
|
Schneider, A.,
Sherwin, T.,
Sasse, R.,
Russell, D. G.,
Gull, K.,
and Seebeck, T.
(1987)
J. Cell Biol.
104,
431-438
|
| 36.
|
Lee, M. G.-S.,
Bihain, B. E.,
Russell, D. G.,
Deckelbaum, R. J.,
and Van der Ploeg, L. H. T.
(1990)
Mol. Cell. Biol.
10,
4506-4517
|
| 37.
|
Muller, N.,
Imboden, M.,
Detmer, E.,
Mansfield, J. M.,
and Seebeck, T.
(1993)
Parasitol.
107,
411-417
|
| 38.
|
Lupas, A.,
Van Dyke, M.,
and Stock, J.
(1991)
Science
252,
1162-1164
|
| 39.
|
Vickerman, K.,
and Preston, T. M.
(1976)
in
Biology of the Kinetoplastida
(Lumsden, W. H. R.
, and Evans, D. A., eds), Vol. 1
, pp. 35-130, Academic Press, London
|
| 40.
|
Whitmore, S. A.,
Settasatian, C.,
Crawford, J.,
Lower, K. M.,
McCallum, B.,
Seshadri, R.,
Cornelisse, C. J.,
Moerland, E. W.,
Cleton-Jansen, A. M.,
Tipping, A. J.,
Mathew, C. G.,
Savnio, M.,
Savoia, A.,
Verlander, P.,
Auerbach, A. D.,
Van Berkel, C.,
Pronk, J. C.,
Doggett, N. A.,
and Callen, D. F.
(1998)
Genomics
52,
325-331
|
| 41.
|
Chou, P. Y.,
Fasman, G. D.,
Chou, P. Y.,
and Fasman, G. D.
(1974)
Biochemistry
13,
222-245
|
| 42.
|
Diamantopoulos, G. S.,
Perez, F.,
Goodson, H. V.,
Batelier, G.,
Melki, R.,
Kreis, T. E.,
and Rickard, J. E.
(1999)
J. Cell Biol.
144,
99-112
|
| 43.
|
Perez, F.,
Diamantopoulos, G. S.,
Stalder, R.,
and Kreis, T. E.
(1999)
Cell
96,
517-527
|
| 44.
|
Pierre, P.,
Scheel, J.,
Rickard, J. E.,
and Kreis, T. E.
(1992)
Cell
70,
887-900
|
| 45.
|
Dilbeck, V.,
Berberof, M.,
Van Cauwenberge, A.,
Alexandre, H.,
and Pays, E.
(1999)
J. Cell Sci.
112,
4687-4694
|
| 46.
|
Olsson, T.,
Bakhiet, m.,
Hojeberg, b.,
Ljungdahl, A.,
Edlund, C.,
Andersson, G.,
Ekre, H.-P.,
Fung-Leung, W.-P.,
Mak, T.,
Wigzell, H.,
Fiszer, U.,
and Kristensson, K.
(1993)
Cell
72,
715-727
|
| 47.
|
Altschul, S. F.,
Madden, T. L.,
Schaffer, A. A.,
Zhang, J.,
Zhang, Z.,
Miller, W.,
and Lipman, D. J.
(1997)
Nucleic Acids Res.
25,
3389-3402
|
| 48.
|
Jordan, M. A.,
and Wilson, L.
(1998)
Curr. Opin. Cell Biol.
10,
123-130
|
| 49.
|
Ludin, B.,
Doll, T.,
Meili, R.,
Kaech, S.,
and Matus, A.
(1996)
Gene (Amst.)
173,
107-111
|
| 50.
|
Del Sal, G.,
Ruaro, M. E.,
Philipson, L.,
and Schneider, C.
(1992)
Cell
70,
595-607
|
| 51.
|
Brancolini, C.,
Benedetti, M.,
and Schneider, C.
(1995)
EMBO J.
14,
5179-5190
|
Copyright © 2000 by The American Society for Biochemistry and Molecular Biology, Inc.

CiteULike Complore Connotea Del.icio.us Digg Reddit Technorati What's this?
This article has been cited by other articles:

|
 |

|
 |
 
D. M. Baron, Z. P. Kabututu, and K. L. Hill
Stuck in reverse: loss of LC1 in Trypanosoma brucei disrupts outer dynein arms and leads to reverse flagellar beat and backward movement
J. Cell Sci.,
May 1, 2007;
120(9):
1513 - 1520.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. M. Baron, K. S. Ralston, Z. P. Kabututu, and K. L. Hill
Functional genomics in Trypanosoma brucei identifies evolutionarily conserved components of motile flagella
J. Cell Sci.,
February 1, 2007;
120(3):
478 - 491.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. S. Ralston, A. G. Lerner, D. R. Diener, and K. L. Hill
Flagellar Motility Contributes to Cytokinesis in Trypanosoma brucei and Is Modulated by an Evolutionarily Conserved Dynein Regulatory System.
Eukaryot. Cell,
April 1, 2006;
5(4):
696 - 711.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
N. Downey, J. C. Hines, K. M. Sinha, and D. S. Ray
Mitochondrial DNA Ligases of Trypanosoma brucei
Eukaryot. Cell,
April 1, 2005;
4(4):
765 - 774.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
G. Rupp and M. E. Porter
A subunit of the dynein regulatory complex in Chlamydomonas is a homologue of a growth arrest-specific gene product
J. Cell Biol.,
July 7, 2003;
162(1):
47 - 57.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. L. Hill
Biology and Mechanism of Trypanosome Cell Motility
Eukaryot. Cell,
April 1, 2003;
2(2):
200 - 208.
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. Fujiyama, M. Yanagida, T. Hayano, Y. Miura, T. Isobe, and N. Takahashi
Isolation and Proteomic Characterization of Human Parvulin-associating Preribosomal Ribonucleoprotein Complexes
J. Biol. Chem.,
June 21, 2002;
277(26):
23773 - 23780.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
N. R. Hutchings, J. E. Donelson, and K. L. Hill
Trypanin is a cytoskeletal linker protein and is required for cell motility in African trypanosomes
J. Cell Biol.,
March 4, 2002;
156(5):
867 - 877.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. J. McConville, K. A. Mullin, S. C. Ilgoutz, and R. D. Teasdale
Secretory Pathway of Trypanosomatid Parasites
Microbiol. Mol. Biol. Rev.,
March 1, 2002;
66(1):
122 - 154.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
N. R. Hutchings, J. E. Donelson, and K. L. Hill
Trypanin is a cytoskeletal linker protein and is required for cell motility in African trypanosomes
J. Cell Biol.,
March 4, 2002;
156(5):
867 - 877.
[Abstract]
[Full Text]
[PDF]
|
 |
|
Copyright © 2000 by the American Society for Biochemistry and Molecular Biology.
|
Advertisement
Advertisement
|