Originally published In Press as doi:10.1074/jbc.M007529200 on September 18, 2000
J. Biol. Chem., Vol. 275, Issue 51, 39981-39990, December 22, 2000
Multiple Regulatory Elements in the Murine Stromelysin-3
Promoter
EVIDENCE FOR DIRECT CONTROL BY CCAAT/ENHANCER-BINDING PROTEIN
AND THYROID AND RETINOID RECEPTORS*
Marie-Gabrielle
Ludwig
,
Paul
Basset
, and
Patrick
Anglard§
From the Institut de Génétique et de Biologie
Moléculaire et Cellulaire, INSERM, CNRS, Université Louis
Pasteur, BP 163, 67404 Illkirch Cedex,
C.U. de Strasbourg, France
Received for publication, August 18, 2000, and in revised form, September 15, 2000
 |
ABSTRACT |
Stromelysin-3 (ST3) belongs to the
matrix metalloproteinase (MMPs) family, a protease family involved in
tissue remodeling. Although this family of enzymes is regulated by
nuclear receptors, few hormone-responsive elements have been
demonstrated in MMP promoters. In order to identify regulatory elements
and/or factors that control the expression of the mouse
st3 gene, we have analyzed genomic sequences
encompassing 5 kilobase pairs of the ST3 promoter. Analysis of these
sequences revealed several CCAAT/enhancer-binding proteins (C/EBP) and
retinoic acid-responsive elements (RAREs), as well as one
thyroid-responsive element. However, in contrast to most MMP promoters,
no AP-1-binding sites were identified. Specific binding activities were
demonstrated for all elements. Consistent with previous reports,
retinoid X receptor is required for maximal binding to the ST3 RAREs
and the TRE. The ST3-C/EBP element was shown to mediate
dose-dependent promoter activation by C/EBP
. Among the
RAREs, the proximal DR1-RARE was shown to be sufficient for ST3
promoter activation by ligand-bound retinoid receptors, whereas the two
distal DR2-RAREs appear to be involved more in the control of base-line
promoter activity. Accordingly, ST3 expression was induced by retinoic
acid and was reduced in cells where specific retinoic acid receptors
had been inactivated. The involvement of these conserved
regulatory elements is discussed in the context of physiological or
pathological situations associated with st3 expression. Our
findings therefore assign to C/EBP, retinoids, and thyroid hormone
important roles in the regulation of ST3 gene expression.
 |
INTRODUCTION |
Matrix metalloproteinases
(MMPs)1 are a family of
structurally related proteinases that play a central role in the
degradation of the extracellular matrix during both normal and
pathological tissue remodeling processes. ST3, a member of
this family, was originally identified in the stromal compartment of a
range of human invasive carcinomas of the breast (1), where its
fibroblastic expression levels correlate with tumor aggressiveness and
poor clinical outcome (2, 3). Since then, stromal expression of
ST3 has been identified during the progression of most types of human carcinomas, including basal cell carcinomas (4), colorectal carcinomas (5), non-small cell lung carcinomas (6), and head and neck
carcinomas (7) suggesting that it contributes to tumor progression.
Consistent with these observations, experimental models of
tumorigenesis have shown that st3 promotes both tumor uptake in
nude mice (8) and homing of malignant cells, the latter being a key
process in both primary tumors and metastasis (9). Furthermore,
ST3 expression has been observed in atherosclerotic vascular
smooth muscle cells, endothelial cells, and macrophages present in
human atherosclerotic lesions, whereas no expression is detected in
normal aortic specimens (10). Like other MMP family members,
st3 is expressed during normal physiological processes such
as wound healing (11), trophoblast implantation (12), mammary gland
involution (13), cycling endometrium (14), and development (15) all of
which are associated with intense tissue remodeling.
Although certain physiological processes associated with MMP expression
are controlled by hormones, few hormone-responsive elements have been
characterized in MMP promoters (16). In the case of st3,
several experimental observations suggest that it may be regulated by
hormones in vivo. For example, in Xenopus laevis, tissues such as the intestine and the tail express
high levels of st3 during metamorphosis, a process that is
controlled by thyroid hormone (17). In human endometrium, which
undergoes monthly cycles of rapid growth and remodeling in response to
ovarian steroid hormones, ST3 is transiently expressed
during the proliferative stage, and there is evidence for its
repression by progesterone (18).
The expression of st3 is also observed during post-lactating
involution of the mammary gland, an apoptotic process associated with
intense extracellular matrix remodeling (13). In addition, during
development, st3 expression has been detected in the fetal interdigital mesoderm of limb bud in human (1) and mouse (15) embryos,
an area associated with programmed cell death. Interestingly, the
formation of interdigital necrotic zones during digit separation has
been shown to be controlled by RA (19), but the mechanism by which
retinoic acid regulates the mouse ST3 gene in this process has not been addressed.
The expression pattern of mouse st3 suggests that it may be
under either the direct or indirect control of hormones and/or vitamin
A derivatives. In order to identify regulatory elements and/or factors
controlling the expression of st3 in both physiological and
pathological conditions, we first isolated and characterized its
promoter. We have identified a number of responsive elements and
provide evidence for direct control of st3 by C/EBP
,
thyroid hormone, and retinoid receptors. Taken together, our data
provide new insights into the mechanism by which st3 can be
regulated in response to stimuli from hormones or vitamin A derivatives in physiological and/or pathological situations associated with tissue
remodeling processes.
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EXPERIMENTAL PROCEDURES |
Cell Culture--
COS-1 cells were cultured in Dulbecco's
modified Eagle's medium supplemented with 5% fetal calf serum. All F9
cell lines were cultured on gelatin-coated flasks in Dulbecco's
modified Eagle's medium containing 4.5% glucose/Ham's F-12 (1/1),
supplemented with 5% fetal calf serum. F9 cells were treated for 2 days with 10
6 M 9-cis-
or all-trans-RA. F9 cell lines harboring null mutations of
RA receptors were kindly provided by Dr. D. Metzger (IGBMC).
Southern Blot Analysis--
Southern blot analysis was performed
using a 6.3-kb BamHI fragment (BB6, Fig. 1) and total
genomic DNA extracted from mouse tail biopsies. Plasmid DNA (0.5 µg)
and total mouse genomic DNA (10 µg) were digested with appropriate
restriction enzymes, separated by agarose gel electrophoresis, and
transferred to Hybond N+ nylon membranes (Amersham
Pharmacia Biotech). A probe encompassing the region from
3.8 to
3.3
kb was generated by PCR amplification (5' primer,
5'-GGCGGCCGCTGAGGGTGGTGGGTGCGCAAGAGGCGG-3'; 3' primer: 5'-CGTAGCTCCGCCCTGCACTGGGATAGCTCCGGAGCC-3'). Hybridization was performed in 1% SDS, 1 M NaCl, 50% formamide, 10%
dextran sulfate, 0.2 mg/ml single-stranded DNA at 42 °C for 8 h. Membranes were washed twice for 30 min in 2× SSC, 0.1× SDS at room
temperature and then twice for 30 min in 0.2× SSC, 0.1× SDS at
60 °C.
DNA Sequencing of the Mouse st3 Gene Promoter--
A
genomic
library generated from mouse DNA was screened with a 5' st3
cDNA probe (9, 13). Several positive overlapping EcoRI
and BamHI genomic fragments were subcloned in order to
sequence exon/intron junctions and 3.8 kb of the mouse st3
gene promoter. Sequencing was performed by automated cycle sequencing,
and nucleic acid sequence homology searches were performed using the
FASTA programs of the GCG sequence analysis package and the combined GenBankTM/EMBL data base.
Primer Extension Analysis--
Two [
-32P]dCTP
-end-labeled antisense primers, PE1 (5'-CTTTCTTCACAGGGTGATGACG-3') and
PE2 (5'-GTGGCCTGGCCCGGGCCATCAGCGGCGA-3'), were annealed at 37 °C to
10 µg of mouse involuting uterus RNA or tRNA as a negative control.
The hybridization buffer was 40 mM PIPES, pH 6.4, 1 mM EDTA, 0.4 M NaCl, 80% formamide. Following ethanol precipitation, hybridized primers were extended at 42 °C for
1.5 h using 40 units of avian myeloblastosis virus-reverse transcriptase in 50 mM Tris-HCl, pH 8, 8 mM
MgCl2, 30 mM KCl, 0.6 mM of each
dNTP, and 1 mM dithiothreitol. Samples were then incubated
with 1 µg of RNase A for 30 min at 37 °C. Extension products were
analyzed on a denaturing polyacrylamide gel along with dideoxy
sequencing reactions of the 6.3-kb BamHI genomic fragment,
using the SEQ primer (5'-GACCTTCAGAAGAGCAGTCGGCACTCT-3').
Polymerase Chain Reaction--
PCR mixtures contained 200 µM of each dNTP, 50 pmol of each primer, 10 ng of
template DNA, 5 units of Taq polymerase (PerkinElmer Life
Sciences), 10 mM Tris-HCl, pH 8.3, 50 mM KCl,
1.5 mM MgCl2, in a total volume of 50 µl
overlaid with 30 µl of mineral oil. The PCRs were performed with a
Thermal Cycler from PerkinElmer Life Sciences.
Construction of Mouse st3 Promoter-CAT Reporter
Plasmids--
st3 promoter sequences were inserted into
either the pBLCAT6 (promoterless) or pBLCAT5 vectors (20). A 0.1-kb CAT
construct, containing 121 bp of mouse st3 5'-flanking
sequences, was generated by subcloning a
SpeI-SmaI fragment into pBluescript II SK+ (pBS) digested with XbaI and HincII. A
PstI-XhoI fragment was then inserted into
pBLCAT6. The 0.1-kb
-CAT construct was generated by PCR from the
0.1-kb CAT template using a 3' primer located on the pBLCAT6 vector and
containing an XhoI site (5'-AATCTCGCCAAGCTCCTCGAG-3'), and a
5' primer containing a PstI site and generating a 14-bp deletion
(5'-GGATCTCGAAGCTTGCATGCCTGCAGGCCGGTTGAGTTGACGAGGCGGGGCGGTGGGGGGTG-3'). The PCR product was digested with PstI and
XhoI and cloned into pBLCAT6. The 1-kb CAT construct was
made by first subcloning a 1-kb EcoRI-SmaI
promoter fragment into the EcoRI-HincII sites of
pBS. The resulting plasmid was then digested with BamHI and XhoI allowing insertion into pBLCAT6 digested with the same
restriction enzymes. The 1.5-kb CAT construct was generated by
replacing the SphI-SpeI fragment of the 1-kb CAT
construct by the 1361-bp-long SphI-SpeI promoter
fragment (
1492 to
176) isolated from the BB6 plasmid. The 2.4-kb
CAT construct was generated by in vivo recombination between
a PCR product and the 1.5-kb CAT construct. This PCR product was
obtained from the 6.3-kb BamHI plasmid (BB6) using an
upstream primer (5'-CATGTCTGGATCTCGAAGCTTCAGACTCAGGCTAGAGAGGT-3'), which is homologous to the pBLCAT6 vector in the first half and to a
fragment of the mouse st3 promoter (nucleotides
2436 to
2417) in the second half. The 3' primer corresponding to
5'-CCTTGAACTCAGAGATCTGCC-3' was complementary to the st3
promoter region from position
1476 to position
1456. 100 ng of the
PCR-amplified product was co-transfected into competent bacteria with
equimolar quantities of the 1.5-kb CAT construct digested with
SphI. The 3.8-kb CAT construct was made by subcloning the
2.8-kb EagI-EcoRI promoter fragment together with
the 1-kb EcoRI-XhoI fragment (isolated from 1 kb
CAT) into pBS. The resulting 3.8-kb EagI-XhoI
fragment was then inserted into modified pBLCAT6 in which an
EagI site was added to the polylinker. The 5-kb CAT
construct was generated as follows; the 6.3-kb BamHI fragment in pBS was digested with EcoRI and XhoI,
and the released fragment was replaced by the
EcoRI-XhoI fragment from the 1-kb CAT construct.
The resulting insert in pBS including 5 kb of promoter sequences was
then cloned into pBLCAT6 as a BamHI-XhoI fragment.
Isolated elements were cloned as double-stranded oligonucleotides (with
5' protruding compatible ends) into pBLCAT5 digested with
HindIII and XbaI. Oligonucleotides from the
coding strand were as follows:
5'-AGCTTCCTGAGGTCACATTTCAATAGTA-3' for DR1-tkCAT, 5'-AGCTTCTGAAGGTCCCGAGTTCAAATCCA-3' for 3'-DR2-tkCAT,
5'-AGCTTCCTGACATACCACTTACATAGTA-3' for DR1 µ-tkCAT,
5'-AGCTTCTGAACATACCGACTTACAATCCA-3'
for DR2 µ-tkCAT, 5'-AGCTTAAGTGTGGTAATGTGGGGTAATGGGA-3' for
C/EBP-tkCAT,
5'-AGCTTAAGCGTGGTAGTGTGGGATAGTGGGA-3' for C/EBPµ-tkCAT; the DR1G-tkCAT, consisting of two consensus motifs separated by one G, and the hC/EBP-tkCAT were described previously(21, 22).
Cell Transfection and CAT Assays--
The calcium phosphate
procedure was used to transfect cells 4 h after plating in 10-cm
diameter culture dishes. CAT reporter plasmids (5 µg of empty vector
and equimolar amounts of promoter constructs) were co-transfected with
0.25 µg of RAR
and 0.25 µg of RXR
or with 0.1 to 1 µg of
C/EBP
expression vectors. 0.5 µg of pCH110 (Amersham Pharmacia
Biotech) was used as an internal control to normalize for variations in
transfection efficiency. Bluescribe plasmid (Stratagene) was used to
adjust the total amount of transfected DNA to 15 µg. The culture
medium was changed 16 h after transfection, and cells were further
incubated for 24 h in 5% fetal calf serum or in medium
supplemented with 10
6 M RA. The
preparation of cell extracts containing 30 units of
-galactosidase
activity and CAT assays were performed as described previously
(23).
Preparation of Cell Extracts--
Whole cell extracts from COS-1
cells transiently transfected with either the RA receptor, the thyroid
hormone receptor
(TR, provided by D. Metzger, IGBMC), or the
C/EBP
expression vectors were prepared as follows. Cells were washed
with phosphate-buffered saline and harvested in extraction buffer (20 mM Tris-HCl, pH 7.5, 2 mM dithiothreitol, 20%
glycerol, 0.4 M KCl, 2 mM phenylmethylsulfonyl fluoride, 1× protease inhibitor mixture from Roche Molecular
Biochemicals). Cell membranes were then disrupted by 3 freeze-thaw
cycles and pelleted. Supernatants were aliquoted and stored at
80 °C. To prepare F9 cell nuclear extracts, cells were washed with
phosphate-buffered saline and harvested in ice-cold low salt buffer (10 mM HEPES-KOH, pH 7.9, 1.5 mM MgCl2,
10 mM KCl, 0.5 mM dithiothreitol, 1× protease inhibitor mixture, 0.2 mM phenylmethylsulfonyl fluoride).
Cells were incubated for 10 min on ice, pelleted, resuspended in low salt buffer, and incubated for 3 min on ice. After centrifugation, the
cell pellet was resuspended in high salt buffer (20 mM
HEPES-KOH, pH 7.9, 26% glycerol, 420 mM NaCl, 1.5 mM MgCl2, 0.2 mM EDTA, 0.5 mM dithiothreitol, 0.2 mM phenylmethylsulfonyl
fluoride, 1× protease inhibitor) to reach a final NaCl concentration
of 0.3 M. After a 30-min incubation on ice and
centrifugation, the nuclear extracts were aliquoted and stored at
80 °C.
Gel Shift Assays--
Double-stranded oligonucleotides harboring
5' overhangs were generated and labeled with
[
-32P]dCTP using Klenow enzyme. DR2- and DR1-RAREs,
C/EBP, C/EBPµ, and hC/EBP probes are described under "Construction
of Mouse ST3 Promoter-CAT Reporter Plasmids"; oligonucleotides used
for TRE and TREµ were 5'-AGCTTCCAAGTGTCAGTAGAGGTCAGAAGA-3' and
5'-AGCTTCCAAGTATCAGTAGAAATCAGAAGA-3', respectively. The DR5 and the mutated DR5µ (24) were gifts from Dr.
C. Rochette-Egly, and the xTRE corresponds to the TRE found in the
X. laevis TR
gene promoter (25). 10 µg (unless otherwise specified) of protein extracts were incubated
with 50,000 cpm of labeled probe and 1.5 µg of poly(dI-dC), in 10 mM HEPES, pH 7.5, 0.5 mM EDTA, 1 mM
dithiothreitol, 80 mM KCl, 0.1% Nonidet P-40, 7.5%
glycerol. Antibodies against RAR
(9
9A6) (26), RAR
(8
10B2)
(27), and RXRs (4RX1D12) (28) were provided by Dr. C. Rochette-Egly.
The samples (20 µl) were incubated for 20 min at room temperature,
prior to loading on a 6% polyacrylamide gel. Gels were dried and
exposed for autoradiography.
RNA Extraction and Northern Blot Analysis--
Cultured cells
were washed with phosphate-buffered saline, and total RNA was prepared
by the guanidinium thiocyanate/phenol/chloroform extraction protocol
(29). Northern blot analysis was performed with 10 µg of RNA as
previously reported (22).
 |
RESULTS |
Isolation and Characterization of the Mouse st3 Gene
Promoter--
st3 genomic clones were isolated from a
genomic library screened with a mouse cDNA probe (9). Overlapping
clones including the whole gene with its 5'-flanking sequences were
used to characterize exon-intron boundaries (Table
I) and promoter sequences. The physical
map of the mouse st3 gene and promoter is illustrated in
Fig. 1A and shows a similar
genomic organization to that of the human gene (23), including 8 exons
and a large first intron. A 6.3-kb BamHI restriction
fragment (BB6) including 5 kb of 5'-flanking sequences was subcloned
into pBluescript II SK+ in order to compare its Southern blot
hybridization pattern to that of total mouse genomic DNA. Both DNAs
were digested with various enzymes and hybridized to a 5' probe, as
indicated (Fig. 1B). As the size of the detected restriction
fragments (4.8, 3.2, and 3.6 kb, respectively) were identical for both
DNAs, the 6.3-kb BamHI fragment was next used for sequence
analysis and generation of promoter constructs.
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Table I
Exon-intron boundaries in the mouse st3 gene
Nucleotide sequences at the exon (capital letters) and intron
(lowercase letters) junctions are shown. Exons are numbered from the
5'-end, as described in Fig. 1; the amino acids at each junction are
numbered according to Lefebvre et al. (13).
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Fig. 1.
A, restriction map of the genomic region
including both the promoter and the gene sequences of mouse ST3.
Boxes indicate exons, and restriction sites are
BamHI (B), SacI (S),
EcoRI (E), EagI (Eg), and
NheI (N); B* is a BamHI
site created during the construction of the genomic library. The 6.3-kb
BamHI fragment (BB6) was used to generate
promoter constructs. The bold line indicates the position of
the 0.5-kb PCR probe used for the Southern blot hybridization.
B, Southern blot analysis of the ST3 5'-flanking region. Ten
µg of mouse genomic DNA and 0.5 µg of BB6 plasmid DNA were digested
with SacI, SacI and NheI, or
SacI and EagI, and hybridized with the 0.5-kb PCR
probe, as indicated. Autoradiographs were exposed for 4 days for mouse
genomic DNA (left panel) and 1.5 h for BB6 plasmid DNA
(right panel).
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Identification of the Transcription Initiation Site--
The mouse
st3 gene transcription start site was determined by primer
extension with RNA recovered from mouse involuting uterus, a tissue
known to express high levels of st3 (9). Primer extension was carried out using antisense primers PE1 and PE2 that are located in
the second (+173 to +152) and the first exon (+140 to +113), respectively (Fig. 3). The transcription start site was demonstrated by
the presence of a single band of 173 bp for the PE1 primer and of 140 bp for PE2 (Fig. 2). The same extended
fragments were observed by using RNA from C26 cells, a murine tumor
cell line expressing st3 (data not shown). This site was
found to be located 27 bp downstream of a TATA sequence and 22 bp
upstream of the translation start codon (Fig.
3). Moreover, alignment of the mouse, human (23), and X. laevis (30) stromelysin-3
sequences shows that the relative position of the TATA sequence and
that of the transcription start site are well conserved (Fig.
4A). However, while the mouse
and human sequences are well conserved between the TATA box and the
ATG, no homology was observed with the X. laevis,
as this sequence harbors an extended 5'-untranslated sequence (30).

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Fig. 2.
Identification of the
transcriptional start site of the ST3 gene by primer
extension analysis. Two end-labeled antisense primers,
complementary to the PE1 and PE2 sequences illustrated in Fig. 3, were
hybridized with 10 µg of mouse involuting uterus RNA (2) or tRNA (1),
as a negative control. Primer-extended products were analyzed on a
denaturing polyacrylamide gel along with the sequencing reactions of
the 6.3-kb BamHI restriction fragment (BB6, Fig.
1) using the primer complementary to the SEQ sequence
underlined in Fig. 3. The primer-extended products observed
after 3 days of exposure are of 173 bp for PE1 and 140 bp for PE2 and
correspond to the same transcription initiation site.
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Fig. 3.
Nucleotide sequence of 2.45 kb of
5'-flanking region of the mouse ST3 gene.
Numbers on the right indicate positions relative
to the transcription start site +1, as determined by primer extension
analysis. The translation initiation site (ATG), at position +23, is
indicated in bold. Sequences complementary to primers (PE1
and PE2) used for mapping of the transcription initiation start site or
in sequencing reactions (SEQ) (Fig. 2) are indicated by
arrows. Relevant restriction sites and putative responsive
elements are underlined; the RAREs direct repeats are
indicated by two arrows. TRE indicates thyroid
hormone-responsive element. The boxed sequence is conserved
between mouse, human, and X. laevis ST3 gene
promoters. Sequences in brackets are two long repeated
regions with 84% homology.
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Fig. 4.
Homology between mouse, human and X. laevis 5'-flanking sequences. A, the
proximal mouse ST3 promoter sequence is compared with that of the human
and X. laevis promoter. The transcription start
site (+1) is indicated by an arrow and the ATG
translation start codon is shown in bold. Vertical
lines indicate homologous nucleotides. Putative transcription
factor binding sites are boxed. B, the sequences
and positions of the mouse TRE, C/EBP. and RAREs are shown in
comparison to those present in the human ST3 promoter. Nucleotides
differing from previously defined consensus sequences are
underlined.
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Putative Responsive Elements in the 5'-Flanking Gene Sequence and
Inter-species Homologies--
We next searched for putative responsive
elements within the first 3.8 kb of 5'-flanking sequences of the mouse
st3 gene (Fig. 3). A region of 80% homology between the
mouse and the human sequences was found to be limited to the first 100 bp of the promoter (Fig. 4A). This region includes the TATA
box, several GC boxes, and a 14-bp sequence (5'-AGAACAAAAGGCAG-3') that
is also conserved in the X. laevis sequence. No
consensus AP-1-binding site was identified in the proximal promoter
region, indicating that the mouse st3 promoter, like its
human homologue, differs in this respect from most MMP proximal
promoters (16). Although upstream sequences of the mouse promoter did
not exhibit highly conserved regions, several putative regulatory
elements were identified at relatively well conserved positions (Fig.
4B). These putative elements include a thyroid
hormone-responsive element (TRE), binding sites for the
CCAAT/enhancer-binding proteins (C/EBP), and several retinoic acid
response elements (RAREs) (Fig. 3). The TRE-like sequence at position
558 of the mouse st3 promoter (Fig. 4B) only
differs by 1 bp from the TRE consensus sequence of the DR4 type, as
does its human homologue present at position
740 (23). It is
noteworthy that the expression of the X. laevis
st3 gene has been associated with thyroid hormone-induced tadpole
metamorphosis (31). We also identified two consensus C/EBP elements
T(T/G)NNGNAA(T/G) (32), at positions
1816 and
1826 of the murine
st3 promoter, whereas only a single copy of this element is
present in the human ST3 gene promoter at position
2165
(22). In contrast to other MMPs, both the mouse and human
st3 promoters are characterized by the presence of RAREs
consisting of a direct repeat of the (A/G)G(G/T)TCA motif spaced by 1 (DR1) or 2 bp (DR2). However, although the position of these elements
is conserved, only the human DR1- and DR2-RAREs are consensus binding
sites, whereas the mouse DR1 at position
367 and the two DR2 at
positions
2340 and
2141 differ by 1 base pair from the consensus
sequence (Fig. 4B). In addition, these two DR2-RAREs are
included in a 165-bp repeated region of 84% identity, as indicated by
brackets in Fig. 3. Although the sequence of the
X. laevis st3 promoter differs significantly from that of the murine promoter, we identified a
conserved GAGA repeated sequence at
1191 bp on the mouse promoter (Fig. 3) which was previously identified at
72 bp in the
X. laevis sequence (30).
Functional Analysis of the Mouse st3 Gene Promoter--
To
determine the contribution of 5'-flanking sequences to ST3 promoter
activity, we performed transient transfection assays in COS-1 cells
with a CAT reporter gene driven by various lengths of the murine
st3 5'-flanking region. The activities of these sequences,
which range in size from 0.1 to 5 kb but with all sharing a common
3'-end corresponding to the +15 position, were then evaluated by CAT
assays (Fig. 5). The largest construct,
which contains 5 kb of 5'-flanking sequences, is able to drive CAT
expression from the reporter construct. Sequential deletion of this
construct revealed the presence of several positive and negative
regulatory regions. Although both the 5-kb CAT and 3.8-kb CAT
constructs exhibit only a weak promoter activity, deletion of their
5'-end which generates the 2.4-kb CAT construct is associated with a 4-fold increase in promoter activity. This is indicative of the presence of a silencing region between positions
3.8 and
2.4 kb
relative to the transcription initiation site. In contrast, further
deletions of this 2.4-kb promoter construct lead to a progressive
decrease in CAT activity, demonstrating a progressive deletion of
positive regulatory regions. The first region, from position
2.4 to
1.5 kb, includes both of the DR2-RAREs and the C/EBP elements, and
the second, from position
1 to
0.1 kb, contains the TRE and an
additional DR1-type RARE, indicating that these elements could
participate in the control of st3 promoter activity. In
contrast, no significant difference in CAT activity was observed when a
region containing the GAGA repeats was deleted, although such repeats
have been shown to be important for basal activity of the X. laevis st3 promoter (30). Finally, the 14-bp box which is conserved in the human, mouse, and X. laevis
proximal promoters was shown to participate in minimal promoter
activity, since its deletion resulted in 50% decrease in CAT
expression. The relative activity of all the constructs was found to be
similar in embryonal carcinoma F9 cells (data not shown), which express
st3.

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Fig. 5.
Analysis of mouse ST3 gene
promoter activity. Various lengths of the mouse ST3 promoter were
cloned into the promoterless vector pBLCAT6 (CAT), and equimolar
amounts of each construct were transfected into COS-1 cells together
with a -galactosidase expression vector. CAT and
-galactosidase activities were determined, as described under
"Experimental Procedures." The values are the means of duplicates
and are representative of three independent experiments.
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Binding of Thyroid Hormone Receptors and C/EBP
to Their Cognate
Elements in the st3 Promoter--
Given that the putative the
st3 TRE- and C/EBP-binding sites are conserved and included
in sequences controlling promoter activity, we next investigated by
EMSA whether they could bind to their corresponding factors (Fig.
6). Gel shift assays were initially
carried out with double-stranded oligonucleotides containing the
putative st3-TRE and nuclear extracts from COS-1 cells
transfected with TR and/or RXR
(Fig. 6A). TR was found to
bind to the st3 TRE-like element (lane 2), as
indicated by the presence of a complex of similar size to that observed
for a consensus TRE (lane 9). The binding affinity of this
complex appeared to be stronger when RXR
was added to TR (lane
3), indicating a higher affinity for TR/RXR heterodimers than for
TR alone. This complex was shown to be specific, as it was only
competed with a 10-50-fold excess of unlabeled st3-TRE
(lanes 4-6) but not by a 50-fold excess of a mutated TRE
(lane 7). Consistent with this observation, no binding was
observed with the mutated TRE (lane 8). These results
demonstrate that TR binds efficiently to the st3-TRE, and
furthermore that RXRs (also called TRAP, thyroid receptor-associated
proteins) appear to increase the binding activity of the TR to their
cognate elements, an effect previously reported for other T3-responsive gene promoters (33).

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Fig. 6.
Binding activity of the ST3-TRE and the C/EBP
element. A, end-labeled oligonucleotides containing the
mouse ST3-TRE (lanes 1-7), the mutated ST3-TRE
(TREµ, lane 8) or a consensus TRE
(xTRE, lane 9) were incubated with extracts from
COS-1 cells transfected with RXR and/or TR expression plasmids, as
indicated. Competition experiments were performed with a 10-, 30-, and
50-fold excess of the "cold" wild type ST3-TRE (wt,
lanes 4-6) or a 50-fold excess of a mutated TRE
(µ, lane 7). B, the
binding activity of the ST3 C/EBP element was tested in the presence of
protein extracts from untransfected COS-1 cells (lane 1) or
from cells transfected with a C/EBP expression vector (lanes
2-6). Competition assays were performed with a 50-fold molar
excess of cold C/EBP-binding site (wt, lane 3) or
mutated (µ, lane 4). Labeled mutated C/EBP
(lane 5) and human ST3-C/EBP (lane 6)
oligonucleotides have been used as negative and positive controls,
respectively.
|
|
The two identified C/EBP elements in the mouse st3 promoter
were analyzed by using a double-stranded oligonucleotide encompassing both sites. Although no complex was observed with an extract from untransfected COS-1 cells (lane 1), complexes of the same
size were observed for both the mouse (lane 2) and the human
ST3-C/EBP elements (lane 6) in the presence of
extracts from cells transfected with a C/EBP
expression vector. This
complex was shown to be specific, since it was only competed by a
50-fold excess of unlabeled mouse C/EBP (wt, lane 3) and not
by the same excess of a mutated C/EBP-binding site
(µ, lane 4), for which no binding
was observed (lane 5). We therefore concluded that C/EBP
efficiently binds to the st3-C/EBP elements, suggesting that
it may regulate the expression of the mouse st3 gene
expression in a manner similar to that of the human ST3
(22).
Both of the Distal DR2-RAREs and the Proximal DR1-RARE Efficiently
Bind to Endogenous RAR/RXR Heterodimers--
EMSA experiments using
the two distal 5'- and 3'-DR2 probes were performed (Fig.
7A) initially with whole cell
extracts derived from untransfected COS-1 cells or cells transfected
with RAR (
,
, and
) and RXR (
,
, and
) expression
vectors. Although no complex was observed with extracts derived from
untransfected COS-1 cells (lanes 2 and 5),
complexes were formed with both 5'- and 3'-DR2-RAREs in the presence of
all six retinoid receptors (lanes 3 and 6). The
3'-DR2 complex (Fig. 7B, lane 2) had similar electrophoretic
migration properties to those observed with a consensus DR5-RARE (Fig.
7B, lane 1) and was competed by a 10-500-fold excess of
either unlabeled st3 3'-DR2 (lanes 3-5) or the
DR5-RARE (lanes 6-8) but not by a mutated DR5 (lanes
9-11) that has been shown previously not to bind the RA receptors
(24). Hence, we concluded that the 3'-DR2-RARE complex that forms in
the presence of the retinoid receptors is specific and that the binding
affinity of this element is similar to that observed for the consensus DR5-RARE. Similar results were observed with the 5'-DR2-RARE (data not
shown).

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Fig. 7.
RAR/RXR heterodimers bind specifically to the
mouse ST3 promoter RAREs. A, gel shift assays were
performed using the 5'- (lanes 1-3) and 3'- (lanes
4-6) ST3 DR2-RARE probes with either whole cell extracts from
untransfected COS-1 cells (lanes 2 and 5) or a
pool of extracts from COS-1 cells containing the six types of RA
receptors (lanes 3 and 6). B, the
3'-DR2-RARE complex observed in the presence of all 6 RA receptors
(lane 2) is competed with a 10-500 molar excess of
unlabeled 3'-DR2-RARE (lanes 3-5) and consensus DR5-RARE
(lanes 6-8) but not with a similar excess of a mutated
DR5-RARE (DR5µ, lanes 9-11). The
labeled consensus DR5-RARE (lane 1) was used as a positive
control. C, binding of RAR/RXR heterodimers on the DR2. The
binding activity of the 3'-DR2 probe was evaluated in the presence
extract from COS-1 cells transfected either with RXR (lane
1), or RAR (lane 2), or both RXR and RAR
(lane 3) expression vectors. The RAR·RXR complex observed
in lane 3 was not observed in the presence of antibodies
raised against either RXRs (lane 4) or RAR (lane
5). D, binding of endogenous receptors on the DR2. The
3'-DR2 probe was incubated with F9 cell nuclear extracts (lane
1) in the presence of a 100-fold molar excess of unlabeled 3'-DR2
oligonucleotide (lane 2), or anti-RXRs (lane 3),
or anti-RAR (lane 4) antibodies. E, binding of
recombinant and endogenous RA receptors to the DR1. The DR1 probe was
incubated with 10 and 20 µg of cell extracts derived from either
transfected COS-1 cells (lanes 1 and 2) or from
F9 cell nuclear extracts (lanes 3 and 4). The
specific shifted or supershifted complexes and the unspecific bands are
indicated by S, SS, and NS, respectively. X-ray
films were exposed overnight (A-C) or for 2 (D)
or 3 (E) days.
|
|
As RXR
and RAR
have previously been shown to mediate efficiently
the activation of the human ST3 gene by RA (21), we
investigated whether these specific receptors could also bind to the
mouse 3'-DR2-RARE (Fig. 7C). We found that the binding of
RXR
or RAR
homodimers to this element was barely detectable
(lane 1 and 2, respectively), whereas a strong
complex was formed in the presence of RAR
/RXR
heterodimers
(lane 3). These data confirm that RAR/RXR heterodimers are
the major functional forms regulating retinoid-responsive elements
(34). As expected, this complex was not observed in the presence of
antibodies raised against either RXRs (lane 4) or RAR
(lane 5) and was partially supershifted.
The binding of endogenous retinoid receptors was then addressed by
using nuclear extracts derived from F9 cells expressing st3
(Fig. 9). As shown in Fig. 7D, incubation of the 3'-DR2-RARE with F9 nuclear extracts resulted in a strong and specific complex (lane 1), which was competed with a 100-fold excess of
unlabeled probe (lane 2). This complex was partially
supershifted, or at least destabilized, in the presence of either RXRs
(lane 3) or RAR
(lane 4) antibodies,
indicating the presence of these receptors in the complex. These
observations demonstrate that endogenous RARs and RXRs present in F9
cells also bind to the st3 DR2-RARE as heterodimers. An EMSA
analysis was also performed using the proximal DR1-RARE. As shown in
Fig. 7E, recombinant RARs and RXRs overexpressed in COS-1
cells (lanes 1 and 2) as well as F9 cell endogenous receptors (lanes 3 and 4) bind
efficiently to this proximal element in a dose-dependent manner.
Activation of the Mouse st3 Promoter by C/EBP
and RA--
By
having demonstrated that both C/EBP
and RA receptors bind to the
st3 promoter, we tested their ability to mediate promoter activation in transient transfection assays (Fig.
8, A and B). The
same wild type or mutated C/EBP containing oligonucleotide sequences as
those used in gel shift assay were inserted into the pBLCAT5
vector (tkCAT). We found that the activity of the tk promoter driven by
the mouse st3 C/EBP was specifically induced in the presence
of the C/EBP
expression plasmid (Fig. 8A). Indeed, a
3-5-fold activation was observed for the C/EBP-tkCAT construct in
response to increasing amounts of C/EBP
expression plasmid ranging
from 0.1 to 1 µg. A similar level of activation was observed when the
human ST3 C/EBP element was used as a positive control. A
mutation in the mouse C/EBP-binding site abolished promoter activation
by C/EBP
.

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Fig. 8.
Transcriptional activation by
C/EBP (A) and by ligand-bound
RA receptors (B). ST3 promoter fragments or
isolated elements were transfected in COS-1 cells together with either
C/EBP (A) or with 0.25 µg of RAR and 0.25 µg of
RXR (B) expression plasmids. Following transfection,
cells were cultured for 24 h with or without 9-cis-RA,
and CAT activity was determined. The CAT activity is expressed as fold
induction by C/EBP (A) or RA (B) over control
cells. The values are the means derived from three independent
experiments.
|
|
The DR1- and DR2-RAREs were then studied, either as isolated elements
or in the context of the st3 promoter, for their capacity to
mediate promoter response to RA. As shown in Fig. 8B, a
2-fold activation in response to RA was observed for both DR1- and
DR2-tkCAT constructs in the presence of RAR
and RXR
expression
vectors, whereas a 3-fold induction was observed for the consensus
DR1G-RARE (35). Similar results were obtained with RAR
and RXR
receptors (data not shown). In contrast, the activity of the tkCAT and
the DR1µ- and DR2µ-tkCAT constructs was not affected by RA,
demonstrating that mutations within these RAREs that prevent binding
(data not shown) also abolish their capacity to mediate
transactivation. Various lengths of the st3 promoter were
then analyzed for their response to RA (Fig. 8B). Whereas
the presence of RA did not affect the 0.1-kb tkCAT construct, which
does not include any RARE, all promoter fragments that included at
least one of the identified RAREs (1-, 2.4-, and 5-kb CAT) were
activated when cells were treated with RA. The 1-kb CAT construct,
containing the DR1-RARE, exhibits a 2-fold induction. Addition of the
two DR2-RAREs (in 2.4- and 5-kb CAT) does not further increase the
response to RA. This suggests that the DR1-RARE is necessary and
sufficient to mediate induction by RA, whereas the role of the
DR2-RAREs would be restricted to the control of basal promoter
activity. It is worth noting that similar RA-induced activities were
observed with endogenous RA receptors when transfections were performed in F9 cells (data not shown).
st3 Gene Expression Is Induced by RA and Is Altered in Cell Mutants
for RARs and/or RXRs--
Consistent with the transcriptional
activation of the st3 promoter, we showed that the
expression of st3 in F9 cells was induced approximately
10-fold by both 9-cis-RA and all-trans-RA, as
evaluated by Northern blot analysis (Fig.
9). Since the regulation of several RA-responsive genes has been shown to be mediated preferentially by
distinct RA receptors in F9 cells (36), we subsequently looked for
st3 expression in mutant F9 cells in which one or two of the six receptors have been inactivated by homologous recombination (37).
As shown in Fig. 10A,
st3 induction by 9-cis-RA was still observed in
all mutant cell lines but to a lesser extent as this induction only
reached 2-3-fold. Although this weaker induction clearly indicates
that the presence of RA receptors is required in order to mediate an
optimal induction by RA, this observation also indicates that these
receptors appear to be redundant for st3 induction and may
in fact substitute for each other. In addition, we noted that the
base-line expression of st3 was significantly reduced in F9
mutant cells, since longer Northern blot exposure was required to
detect a signal comparable to that observed in wild type cells. This
expression was actually reduced by around 50% in cell lines where a
single receptor was inactivated and was further decreased in double
knock-out F9 cells. This was particularly apparent in RAR
/
RXR
/
cells in which a 4-fold decrease in st3
expression was observed (Fig. 10B). However, because
this decrease results from the lack of both of the receptors and is
suggestive of a qualitative requirement, it is important to note that
RAR
and RXR
are the predominant RA receptors expressed in F9
cells (38). In this respect, it is possible that the strong decrease in
st3 expression associated with their inactivation may
correspond simply to the lower levels of the other receptors that are
not present in sufficient quantities to substitute for RAR
and
RXR
(34).

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Fig. 9.
ST3 RNA expression in response to
9-cis-RA or all-trans-RA. Total
RNA (10 µg) was extracted from F9 cells exposed to 1 µM
9-cis-RA or all-trans-RA for 2 days. ST3 and 36B4
expression were then analyzed by Northern blot, as described under
"Experimental Procedures." Autoradiographs were exposed for either
4 h (ST3) or 7 h (36B4).
|
|

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Fig. 10.
Analysis of ST3 gene
expression in RA receptor knock-out F9 cell lines. A,
ST3 response to 1 µM 9-cis-RA was evaluated by
Northern blot in mutant F9 cells. Genotypes are indicated on the
top of each lane. The same RNA samples were hybridized with
mouse ST3 and 36B4 probes, and the transcripts were visualized by
autoradiography, after 14 h of exposure for 36B4 and ST3.
B, quantification of the basal ST3 RNA expression in wild
type (wt) and mutant F9 cells. Relative levels of ST3
transcripts were evaluated after normalization with 36B4 RNA
levels.
|
|
 |
DISCUSSION |
The mouse st3 gene has been shown to be induced in
various tissue remodeling processes that are characterized by
extracellular matrix turnover and/or apoptosis and that are controlled
by hormones (18) and/or retinoic acid (19). However, the mechanisms by which its expression is regulated have not been addressed. In the
present study, the mouse st3 promoter was isolated and
analyzed to investigate this question. The transcription initiation
site was mapped, and minimal promoter sequences driving transcription were identified between positions
121 and +15. This minimal promoter activity was shown to be modulated through elements contained within
various upstream regions. The analysis of 5 kb of st3
promoter led to the identification of a number of regulatory elements
including TRE, RAREs, and C/EBPs that are conserved between human,
mouse, and/or X. laevis. We have shown that these
elements are functional in binding assays and/or promoter studies and
are likely to participate in the in vivo control of mouse
st3 expression.
In normal physiological conditions, the X. laevis
st3 has been shown to be tightly regulated by the thyroid
hormone during tadpole metamorphosis. However, although a TRE of the
DR4 type has been recently identified in both the X. laevis2 and the
human ST3 gene (Fig. 4), this element has not yet been characterized. With respect to the mouse TRE, we have shown here that
it binds thyroid hormone receptors in the presence of RXR
. This
finding supports previous studies that have described RXRs as being
members of the thyroid hormone receptor-associated proteins and that
the binding affinity of TR/RXR heterodimers to TRE is higher than that
of TR alone (33). However, although the conservation of this element
suggests a physiological relevance, no target mouse or human cells that
express st3 in response to T3 have been reported thus far.
Expression of the X. laevis st3 in response to T3
during tadpole metamorphosis therefore remains the only example of the
physiological expression of st3 in T3-controlled apoptotic processes (31).
In pathological situations, a number of clinical and experimental
studies suggest an involvement for T3 and its receptors in
carcinogenesis. Amplification or deletion of erbA genes has been described in breast cancer (39-41), and there is experimental evidence for an increased number of thyroid receptors in spontaneous rat mammary tumors (42). In this respect, it is interesting to note
that the expression and secretion of stromelysin-1, which promotes
mammary carcinogenesis (43), is actually regulated by thyroid hormone
in cells derived from the mammary gland (44). As st3 was originally
isolated from breast cancer tissue, the possible role for thyroid
hormone in the regulation of this gene in vivo cannot be excluded.
As with most MMP genes, both the human and mouse st3 genes
are induced by TPA (1, 9). Such TPA activation is normally mediated
through TPA-responsive elements or AP-1-binding sites. However, while
the position of this element is very well conserved in most MMP
promoters, no AP-1-binding site was found within the mouse
st3 gene 5'-flanking sequences studied here, suggesting either that this element is located elsewhere in the promoter or that
an alternative mechanism is involved in st3 transcriptional activation by TPA. A recent report has demonstrated that st3
can still be induced by TPA in vivo, in transgenic mice in
which a c-jun transactivation mutant dramatically represses
TPA-induced AP-1 activation (45). This observation implies that
alternative regulatory element(s) exist that could mediate
st3 transcriptional activation by TPA. In this respect, the
conserved C/EBP element that we have identified in the mouse
st3 promoter appears to be a good candidate, as other
studies have shown that C/EBP-binding sites mediate the activation of a
number of TPA-responsive genes (46, 47), including the human
ST3 gene (22). Indeed, we have shown that this element can
bind efficiently to the C/EBP
transcription factor, which in turn
activates transcription. Interestingly, among the various physiological
processes in which C/EBP
has been reported to play a role (48, 49),
the involution of the mammary gland for one (50) has been associated
with high levels of st3 (13). Furthermore, C/EBP
has been
shown to control macrophage differentiation (51), a process associated
with the expression of several MMPs (52, 53) including ST3
(10). Therefore, in conjunction with data from these studies, our data
suggest that the requirement of C/EBP
in the control of
stromelysin-3 expression may be physiologically relevant.
Another aspect of st3 regulation that differs from other
MMPs is its positive regulation by RA. RA has been shown to repress the
expression of AP-1-regulated genes and, consistent with this observation, the expression of various MMP genes is repressed by RA
(16). The present study supports further our previous findings that
demonstrated that expression of the human ST3 gene is
induced by RA (21). We found indeed that the human DR1- and DR2-RAREs
are highly conserved in the mouse promoter. Furthermore, we have shown
that all RAREs present in the mouse st3 promoter are capable
of binding RA receptors. This binding occurred preferentially with
RAR/RXR heterodimers and is consistent with what we and others (36)
have observed for the human ST3 gene and for several
RA-responsive genes, as these heterodimers are considered to be the
functional units controlling RARE-dependent promoter
transactivation. However, although multiple RAREs present in several
gene promoters have been shown to be required for promoter activation
and to cooperate for an optimal response to RA (54), we found that the
proximal DR1-RARE of ST3 alone was sufficient to mediate
promoter activation by RA and that this response was not further
induced in promoter constructs including the two additional DR2-RAREs.
When we evaluated st3 expression in cells exposed to RA, we
found that it was indeed induced by both 9-cis-RA and
all-trans-RA. In addition, the base-line expression of
st3 was significantly reduced in cells in which RA receptors
were inactivated by homologous recombination. Together, these
observations support that RA receptors contribute to the regulation of
st3 base-line expression and suggest furthermore that
whereas the DR1 is required for the st3 response to RA, the DR2-RAREs contribute to the base-line expression of ST3.
Certain observations in vivo are supportive of physiological
relevance in the regulation of st3 expression by RA. For
example, the process of interdigital cell death in digit separation
during embryogenesis is controlled by RA (19) and is associated with the expression of the human (1) and mouse st3 (15) and other genes such as bone morphogenic proteins and tissue
transglutaminase that have previously been shown to play a role in
apoptosis (13, 55). This process does not occur in mice in which RA
receptors such as RAR
and RAR
have been inactivated (19).
Interestingly, since the expression level of both the st3
and bmp-7 genes is almost undetectable in these knock-out
mice, certain authors (56) have suggested that RA might increase cell
death in interdigital necrotic zones through a modulation of both of
these genes, thereby contributing directly to this tissue remodeling
process. With respect to st3, by showing for the first time
that RA receptors bind to st3-RAREs and that their
inactivation alters st3 expression and response to RA, our
data provide evidence for the direct transcriptional control of
st3 by RA in vivo. Furthermore, one should note
that certain physiological processes such as tail resorption controlled by T3 during frog metamorphosis, and mouse interdigital separation controlled by RA, are associated with cell death suggesting a role for
st3 in apoptosis that has been conserved across evolution.
In summary, we have isolated the mouse st3 promoter in order
to provide further insight into the regulation of the expression of
this gene. As discussed here, although st3 expression has
been detected in a variety of tissues (see Introduction), very little was known about the molecular mechanisms controlling its induction. Although homology between the human and the mouse st3
promoters is restricted to a limited proximal region, we have
identified and characterized distal regulatory elements such as a TRE,
C/EBPs, and RAREs that are well conserved and whose corresponding
binding factors are known to be involved in the regulation tissue
remodeling processes associated with st3 expression.
Therefore, we can speculate that the direct control of st3
expression by these factors may also be of importance in
vivo. Determining how the st3 gene is regulated
in vivo in a cell-specific manner represents a future challenge that will be not only of basic interest but may also have
interesting applications in the context of gene therapy directed against the tumor stroma.
 |
ACKNOWLEDGEMENTS |
We thank J. C. Young, W. Mohan, and B. Wasylyk for critical reading of the manuscript and E. Guérin and D. Luo for stimulating discussions. We are grateful to
O. Lefebvre (IGBMC) for kindly providing mouse ST3 genomic clones;
P. F. Johnson (National Institutes of Health, Bethesda) for the
C/EBP expression plasmid; D. Metzger (IGBMC) for the thyroid hormone
expression vector and the F9 cell mutants; C. Rochette Egly (IGBMC) for
retinoic acid antibodies; and P. Kastner (IGBMC) for RARs and RXRs
expression plasmids.
 |
FOOTNOTES |
*
This work was supported by funds from INSERM, the CNRS, the
Hôpital Universitaire de Strasbourg, the Bristol-Myers Squibb Pharmaceutical Research Institute, the Association pour la Recherche sur le Cancer Project 5421, the Ligue Nationale Française Contre le Cancer, and the Comité du Bas Rhin et du Haut-Rhin, and the Fondation pour la Recherche Médicale Française.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
This work is dedicated to the memory of Professor Paul Basset.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EMBL Data Bank with accession number(s) AF297645.
Deceased.
Supported by a fellowship from the Association pour la Recherche
sur le Cancer.
§
To whom correspondence should be addressed: Institut de
Génétique et de Biologie Moléculaire et Cellulaire,
BP 163, 67404 Illkirch Cedex, France. Tel.: 33-388-65-3420; Fax:
33-388-65-3201; E-mail: anglard@igbmc.u-strasbg.fr.
Published, JBC Papers in Press, September 18, 2000, DOI 10.1074/jbc.M007529200
2
Y. B. Shi, personal communication.
 |
ABBREVIATIONS |
The abbreviations used are:
MMP, matrix
metalloproteinases;
bp, base pair(s);
CAT, chloramphenicol
acetyltransferase;
C/EBP, CCAAT/enhancer-binding protein;
DR1 to DR5, direct repeats of the (A/G)G(G/T)TCA motif separated by 1-5
nucleotides;
EMSA, electromobility shift assay;
IGBMC, Institut de
Génétique et de Biologie Moléculaire et Cellulaire;
kb, kilobase pair(s);
PCR, polymerase chain reaction;
RA, retinoic
acid;
RAR, retinoic acid receptor;
RARE, retinoic acid responsive
element;
RXR, retinoid X receptor;
ST3, stromelysin-3;
T3, thyroid
hormone;
tk, thymidine kinase;
TR, T3 receptor;
TRE, T3-responsive
element;
PIPES, 1,4-piperazinediethanesulfonic acid;
TPA, 12-O-tetradecanoylphorbol-13-acetate.
 |
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