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J. Biol. Chem., Vol. 275, Issue 52, 41258-41262, December 29, 2000
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From the Department of Physiology and Biophysics, University of
Iowa College of Medicine, Iowa City, Iowa 52242
Received for publication, September 5, 2000, and in revised form, September 28, 2000
Photoreceptor cGMP phosphodiesterase (PDE6) is
the effector enzyme in the G protein-mediated visual transduction
cascade. In the dark, the activity of PDE6 is shut off by the
inhibitory Photoreceptor cGMP phosphodiesterases
(PDE61 family) function as
effector proteins in the vertebrate visual transduction, which is
mediated by the rhodopsin-coupled G protein, transducin (1-3). Retinal
rod PDE6 is composed of two catalytic PDE6 Two regions of P Progress in the investigation of the structure/function of PDE6 and the
mechanism of PDE6 inhibition by P Materials--
cGMP was obtained from Roche Molecular
Biochemicals. [3H]cGMP was a product of Amersham
Pharmacia Biotech. All restriction enzymes were purchased from New
England Biolabs. AmpliTaq® DNA polymerase was a product of PerkinElmer
Life Sciences, and Pfu DNA polymerase was a product of
Stratagene. Rabbit polyclonal His probe (H-15) antibodies were
purchased from Santa Cruz Biotechnology. Zaprinast and all other
reagents were purchased from Sigma.
Preparation of P Cloning of Chi16 and Chi17--
The construct for expression of
Chi16 (Fig. 1) was obtained using the pFastBacHTbChi4 vector containing
cDNA coding for a PDE6 Site-directed Mutagenesis of Chi16--
A unique NheI
site was introduced into Chi16 cDNA using a
QuikChangeTM kit (Stratagene). Single amino acid
substitutions corresponding to PDE6 Expression and Purification of Chi16, Chi17, and Chi16
Mutants--
Sf9 cells were harvested at 60 h after
infection, washed with 20 mM Tris-HCl buffer, pH 7.8, containing 50 mM NaCl, and resuspended in the same buffer
containing a protease inhibitor mixture (10 µg/ml pepstatin, 5 µg/ml leupeptin, and 0.2 mM phenylmethylsulfonyl fluoride). After sonication using 30-s pulses for a total duration of 3 min, the supernatant (100,000 × g, 45 min) was loaded
onto a column with a His-Bind resin (Novagen) equilibrated with
20 mM Tris-HCl buffer, pH 7.8, containing 10 mM
imidazole. The resin was washed with a 5× volume of the same buffer
containing 500 mM NaCl and 25 mM imidazole.
Proteins were eluted with the buffer containing 250 mM
imidazole. Other Methods--
PDE activity was measured using
[3H]cGMP as described (27, 28). Less than 15% of cGMP
was hydrolyzed during these reactions. The Ki values
for inhibition of PDE activity by P Functional Analysis of Chimeric PDE6
The PDE
To test the potential role of the PDE6 noncatalytic cGMP-binding
domain, the PDE6 Ala-scanning Mutagenesis of the P
Next, all catalytically active Chi16 mutants were examined for
inhibition by P The vertebrate visual transduction cascade is among the most
studied and best understood G protein signaling systems. Yet, PDE6, the
key enzyme of vision, remains arguably one of the most obscure G
protein effectors in terms of understanding its structure/function relationship. Difficulties in the development of an efficient expression system for PDE6 have precluded the systematic mutational analysis of the enzyme (17-19). Our attempts to express functionally wild-type PDE6 Previously we demonstrated (16) that binding of the P Ala-scanning mutational analysis of PDE6 The services provided by the Diabetes and
Endocrinology Research Center of the University of Iowa were supported
by National Institutes of Health Grant DK-25295.
*
This work was supported by National Institutes of Health
Grant EY-10843.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
Published, JBC Papers in Press, October 6, 2000, DOI 10.1074/jbc.M008094200
2
A. E. Granovsky and N. O. Artemyev,
unpublished observations.
The abbreviations used are:
PDE, cGMP
phosphodiesterase;
PDE6
Identification of the
Subunit-interacting Residues on
Photoreceptor cGMP Phosphodiesterase, PDE6
'*
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ABSTRACT
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
subunit (P
). Chimeric proteins between cone PDE6
'
and cGMP-binding and cGMP-specific PDE (PDE5) have been constructed and
expressed in Sf9 cells to study the mechanism of inhibition of
PDE6 catalytic activity by P
. Substitution of the segment
PDE5-(773-820) by the corresponding PDE6
'-(737-784)
sequence in the wild-type PDE5 or in a PDE5/PDE6
' chimera containing
the catalytic domain of PDE5 results in chimeric enzymes capable of
inhibitory interaction with P
. The catalytic properties of the
chimeric PDEs remained similar to those of PDE5. Ala-scanning
mutational analysis of the P
-binding region, PDE6
'-(750-760),
revealed PDE6
' residues essential for the interaction. The M758A
mutation markedly impaired and the Q752A mutation moderately impaired
the inhibition of chimeric PDE by P
. The analysis of the catalytic
properties of mutant PDEs and a model of the PDE6 catalytic domain
suggest that residues Met758 and Gln752
directly bind P
. A model of the PDE6 catalytic site shows that PDE6
'-(750-760) forms a loop at the entrance to the cGMP-binding pocket. Binding of P
to Met758 would effectively block
access of cGMP to the catalytic cavity, providing a structural basis
for the mechanism of PDE6 inhibition.
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INTRODUCTION
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
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DISCUSSION
REFERENCES

subunits each tightly
associated with the smaller inhibitory
subunit (P
) (4-6). Cone
PDE consists of two identical PDE
' subunits complexed with two
copies of the cone-specific P
subunit (7-9). The catalytic subunits
of rod and cone PDE, as well as the respective P
subunits, share a
high degree of homology (9-10). The key role of P
is to inhibit
cGMP hydrolysis by the catalytic subunits in the dark. Upon light
stimulation of photoreceptors, PDE6 is activated by GTP-bound
transducin-
, which displaces P
from the enzyme catalytic core.
are principally involved in the interaction with
the PDE6 catalytic subunits, the central polycationic region (residues
24-45 of rod P
) and the P
C terminus. The C terminus of P
constitutes the key inhibitory domain, whereas the polycationic region
enhances the overall affinity of P
toward PDE6 catalytic subunits
(11-14). A cross-linking study localized the P
C-terminal binding
site on PDE6
to residues 751-763 (residues 749-761 of PDE6
or
PDE6
') within the broader PDE6 catalytic domain (15). Our further
analysis of the interaction between fluorescently labeled P
and
PDE6
suggests that the C terminus of P
inhibits PDE6 activity
by physically blocking the PDE catalytic site (16).
has been slowed by the lack of an
efficient expression system for PDE6 (17, 18). Our approach to
developing a system for PDE6 expression and mutagenesis included the
construction of chimeras between PDE6
' and cGMP-binding,
cGMP-specific PDE (PDE5 family) (19). PDE5 and PDE6 share a common
domain organization, i.e. two noncatalytic cGMP-binding
sites located N-terminally to the conserved PDE catalytic domain (20).
Furthermore, PDE5 and PDE6 display a high homology (45-48% identity)
between catalytic domains, a strong substrate preference for cGMP, and
similar patterns of inhibition by competitive inhibitors such as
zaprinast, dipyridamole, and sildenafil (20-23). Unlike PDE6, PDE5 is
readily expressed using the baculovirus/insect cell system (24, 25).
Earlier, we reported (19) the functional expression and
characterization of a chimeric PDE6
'/PDE5 enzyme containing the
PDE6
' noncatalytic cGMP-binding sites and the PDE5 catalytic domain.
In this study, we generated chimeric PDE6
'/PDE5 enzymes that contain
the P
C-terminal binding site and that are potently inhibited by
P
. Ala-scanning mutational analysis of the P
-binding site, using
chimeric PDE as a template, revealed the key interaction residues and
provided structural justification for the mechanism of PDE6 inhibition.
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EXPERIMENTAL PROCEDURES
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EXPERIMENTAL PROCEDURES
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DISCUSSION
REFERENCES
--
The P
subunit was expressed in
Escherichia coli and purified on a SP-Sepharose fast flow
column and on a C-4 high pressure liquid chromatography column
(Microsorb-MW, Rainin) as described (26). Purified P
is lyophilized,
dissolved in 20 mM HEPES buffer, pH 7.5, and stored at
80 °C until use.
'/PDE5 chimera, Chi4 (19). A silent
SpeI restriction site (codons for
PDE5-Glu770-Leu771-Val772) was
introduced into the Chi4 cDNA using a QuikChangeTM kit
(Stratagene) and a pair of complementary oligonucleotides encoding for
a T
A substitution. The pFastBacHTbChi4 plasmid was used as a
template for PCR using a Pfu DNA polymerase. The PCR product
was digested with DpnI-specific for methylated and hemimethylated DNA and transformed into E. coli DH5
. To
generate Chi16, the PDE6
' DNA fragment coding for
PDE6
'-(737-784) was PCR-amplified using a pBlueScriptPDE6
'
vector (8, 19) as a template. The PCR product was cut with
SpeI and StuI and ligated into the
SpeI/StuI-digested
pFastBacHTbChi4-SpeI. To obtain Chi17, the
PvuII/SphI fragment from pFastBacHTbChi16 was
subcloned into pFastBacHTbPDE5 (19).
' residues at positions 750-760
were generated in Chi16 by PCR-directed mutagenesis. To facilitate the
screening procedure, mutant primers were designed to either introduce
or eliminate a suitable restriction site. For each mutant, the PCR
product was obtained using a forward primer containing a mutated codon and a reverse primer carrying the StuI site. Purified PCR
products were used as reversed primers for a second round PCR
amplification with a forward primer containing NheI. The
pFastBacHTbChi16 vector was used as a template in both PCR rounds.
Final PCR products were digested with NheI/StuI
and subcloned into the pFastBacHTbChi16 vector cut with the same
enzymes. Sequences of all mutants were verified by automated DNA
sequencing at the University of Iowa DNA Core Facility.
-Mercaptoethanol (2 mM) was added to the
mixture. Purified proteins were dialyzed against 40% glycerol and stored at
20 °C.
and zaprinast were measured
using 0.5 µM cGMP (i.e. <35% of
Km value for chimeric and mutant PDEs). Protein
concentrations were determined by the method of Bradford (29), using
IgG as a standard, or by using calculated extinction coefficients at
280 nm. The molar concentrations of Chi16 and mutant PDEs, [PDE],
were calculated based on the fraction of PDE protein in preparations
and the molecular mass of 93.0 kDa. The fractional
concentrations of PDE were determined from analysis of the Coomassie
Blue-stained SDS gels using a Hewlett-Packard ScanJet II CX/T scanner
and Scion Image Beta 4.02 software. A typical fraction of PDE in
partially purified preparations was 10-15%. The
kcat values for cGMP hydrolysis were calculated
as Vmax/[PDE]. SDS-polyacrylamide gel
electrophoresis was performed by the method of Laemmli (30) in 10-12%
acrylamide gels. For Western immunoblotting, proteins were transferred
to nitrocellulose (0.1 µm, Schleicher & Schuell) and analyzed using
rabbit His probe (H-15) or sheep anti-PDE6
' antibodies (19,
31). The antibody-antigen complexes were detected using anti-rabbit or
anti-goat/sheep IgG conjugated to horseradish peroxidase and ECL
reagent (Amersham Pharmacia Biotech). Fitting the experimental data to
equations was performed with nonlinear least squares criteria using
GraphPad Prizm Software. The Ki,
Km, and IC50 values are expressed as
mean ± S.E. for three independent measurements.
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RESULTS
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
'/PDE5 Proteins Containing
the P
-binding Site--
Previously we demonstrated (19) a
functional expression of chimeric PDE6
'/PDE5 protein, Chi4, using
Baculovirus/Sf9 system. Chi4 contained the regulatory,
noncatalytic cGMP-binding domain of PDE6
' and the catalytic domain
of PDE5 (Fig. 1A). Chi4 was used as a basic template for the generation of new chimeras in which
various portions of the PDE5 catalytic domain were replaced by
corresponding sequences from PDE6
'. Chi16, containing a segment of
48 residues from PDE6
' (PDE6
'-(737-784)) (Fig. 1), was
functionally expressed in Sf9 cells with a yield of soluble
protein at ~100 µg/100 ml of culture. Chi16 hydrolyzed cGMP with a
Km value of 2.8 µM and a
kcat value of 9.0 s
1
(Fig. 2A and Table
I). Both kinetic parameters of Chi16 were comparable to those of PDE5 and Chi4 (Table I). In addition, Chi16 was
potently inhibited by zaprinast, a PDE5/PDE6- specific competitive
inhibitor (IC50 0.12 µM) (Fig.
2B).

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Fig. 1.
A, schematic representation of
PDE6
'/PDE5 chimeras. Shown are the residues in the P
-binding site
substituted by alanine. B, Western blot analysis of Chi16,
Chi17, and Chi16 mutants. Recombinant His6-tagged chimeras
and mutants were expressed in Sf9 cells and partially purified
using chromatography on a His-Bind resin (Novagen) as described under
"Experimental Procedures." Immunoblotting of Chi16 and Chi16
mutants (B) was performed using sheep anti-PDE6
'
antibodies (19). Chi17 (C) was detected using rabbit
polyclonal His probe (H-15) antibodies.

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Fig. 2.
Catalytic properties of Chi16 and Chi17.
A, kinetics of cGMP hydrolysis by Chi16 (
) and Chi17
(
). PDE activities were determined using 0.1 µCi of
[3H]cGMP and increasing concentrations of unlabeled cGMP.
The rates of cGMP hydrolysis are expressed as percentage of maximal
activity of PDE5 (9.6 mol of cGMP·mol
PDE
1·s
1) (19).
The kinetic characteristics for Chi16 (Km 2.8 ± 0.5 µM, kcat 9.0 s
1) and Chi 17 (Km
1.9 ± 0.3 µM, kcat 9.8 s
1) were calculated from the fitting curves.
B, inhibition of Chi16 and Chi17 activity by zaprinast.
Activities of Chi16 (
) and Chi17 (
) were determined in the
presence of 0.5 µM cGMP and increasing concentrations of
zaprinast and were expressed as a percentage of respective PDE activity
in the absence of zaprinast. The calculated IC50 values for
Chi16 and Chi17 were 0.12 ± 0.01 and 0.77 ± 0.02 µM, respectively.
Functional properties of Chi16 mutants
'-(737-784) insert includes a segment PDE
'-(749-761)
that was previously identified as a binding site for the P
C
terminus. The sequence corresponding to PDE
'-(749-761) is unique for photoreceptor PDEs, which show a strong conservation at this site
(15). In contrast to PDE5 and Chi4 (19), the catalytic activity of
Chi16 was effectively inhibited by P
. The Ki value of 3.6 nM indicates that P
binds to Chi16 with
only a 20-fold lower affinity than the affinity of its interaction with
native PDE6
' (Fig. 3 and Table I).

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Fig. 3.
Inhibition of the catalytic activity of Chi16
and Chi17 by P
. The activities of Chi16
(
) and Chi17 (
) were determined upon addition of increasing
concentrations of P
, using 0.5 µM cGMP as a substrate.
The Ki values from the inhibition curves were
3.6 ± 0.4 nM for Chi16 and 142 ± 13 nM for Chi17.
'-(737-784) region was also replaced into the PDE5
cDNA (Fig. 1). The resulting chimera, Chi17, had catalytic properties similar to those of PDE5 and Chi16 (Km
1.9 µM and kcat 9.8 s
1) (Fig. 2A and Table I). The
IC50 value for the Chi17 inhibition by zaprinast (0.77 µM) was similar to the IC50 value for PDE5 but somewhat higher than the IC50 value for Chi16 (Fig.
2B and Table I). P
inhibited the cGMP hydrolysis by Chi17
less potently than the catalytic activity of Chi16. The maximal
inhibition was up to 70% of Chi17 activity, and the
Ki value was 142 nM (Fig. 3). These
results suggest that the noncatalytic cGMP-binding domain of PDE6
'
contributes to the high affinity interaction with P
.
-binding Region--
An
Ala-scanning mutagenesis of the P
C-terminal binding site in Chi16
was performed to identify the P
-binding residues of PDE6
'. Eleven
consecutive residues starting at position 750 were substituted with
alanine. The Chi16 mutants were expressed in Sf9 cells and
partially purified from the soluble fraction using an affinity
chromatography on a His-Bind resin. The expression levels of soluble
Chi16 mutants were 50-100 µg/100 ml culture, i.e.
comparable to that of Chi16. All Chi16 mutants were analyzed for their
ability to hydrolyze cGMP. Two mutants, L751A and D760A, were
catalytically inactive. Two other mutants, P755A and I756A, displayed
notably reduced catalytic rates (Table I). In addition to lowering the
kcat value for cGMP hydrolysis, the P755A
substitution also resulted in an increase in the Km
value from 2.8 to 42 µM (Table I). The catalytic
properties of P755A indicate that this mutation likely affected the
overall folding of the catalytic site in Chi16. The
Km values for cGMP hydrolysis for the remaining
Chi16 mutants were within the 4-15 µM range (Table I).
Inhibition of Chi16 mutants by zaprinast revealed no large variations
in their IC50 values, which were comparable to the
IC50 value for Chi16 (Table I).
. Most of the mutants retained a functional interaction with P
with the Ki values of ~0.8
to 5 nM (Table I). Two mutants, Q752A and M758A, were
defective in P
binding. The Q752A mutation had a moderate effect on
interaction with P
. P
was capable of full inhibition of the Q752A
catalytic activity, but the Ki value was increased
to 29 nM (Fig. 4C). A major impairment of the
P
interaction was observed for the M758A mutant. The inhibition of
M758A by P
was incomplete (~75%) with the Ki
value of 97 nM (Fig. 4C). Since the catalytic
properties of Q752A and M758A were similar to those of Chi16 (Fig. 4),
the defects of P
binding are not likely to be caused by alterations
in overall folding of the catalytic domain in these mutants.

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Fig. 4.
Functional properties of Chi16 mutants, Q752A
and M758A. A, kinetics of cGMP hydrolysis by Q752A
(
) and M758A (
). PDE activities were determined using 0.1 µCi
of [3H]cGMP and increasing concentrations of unlabeled
cGMP. The rates of cGMP hydrolysis are expressed as percentage of
maximal activity of PDE5 (9.6 mol of cGMP·mol
PDE
1·s
1) (19).
The kinetic characteristics for Q752A (Km 12 ± 2 µM, kcat 8.0 s
1) and M758A (Km 9.5 ± 0.9 µM, kcat 8.9 s
1) were calculated from the fitting curves.
B, inhibition of Q752A and M758A activity by zaprinast.
Activities of Q752A (
) and M758A (
) were determined in the
presence of 0.5 µM cGMP and increasing concentrations of
zaprinast and were expressed as a percentage of respective PDE activity
in the absence of zaprinast. The calculated IC50 values for
Q752A and M758A were 0.20 ± 0.01 and 0.26 ± 0.01 µM, respectively. C, inhibition of the
catalytic activity of Q752A and M758A by P
. The activities of Q752A
(
) and M758A (
) were determined upon addition of increasing
concentrations of P
, using 0.5 µM cGMP as a substrate.
The Ki values from the inhibition curves were
29 ± 4 nM for Q752A and 97 ± 10 nM
for M758A.
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DISCUSSION
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
' and co-express PDE6
' with P
using the
Baculovirus/Sf9, COS7, or retinoblastoma Y79 cell systems have
also been unsuccessful.2 A
construction of chimeric enzymes between PDE6
' and related PDE5 has
been proven as a useful tool for the study of PDE6. Previously, we
demonstrated that a fully functional chimeric PDE6
'/PDE5 enzyme, containing the PDE6
' noncatalytic cGMP-binding sites and the PDE5
catalytic domain, can be efficiently expressed in the
Baculovirus/insect cell system (19). This chimeric enzyme showed
catalytic properties and noncatalytic cGMP-binding characteristics
analogous to those of PDE5 and PDE6
', respectively. Chimeric
PDE6
'/PDE5 proteins containing the PDE6
'-active site were
catalytically inactive, suggesting that the catalytic domain contains
specific sequences preventing its functional folding in insect cells.
Based on these findings, we generated and analyzed a number of chimeric
PDE6
'/PDE5 proteins with replacements of various PDE5 catalytic
domain segments by corresponding PDE6
' sequences. A sequence,
PDE6
'-(737-784), containing the P
C-terminal binding site
P
'-(749-761) (15), has been introduced in one of these chimeras,
Chi16 (Fig. 1). Not only was Chi16 catalytically active with
Km and kcat values similar to
PDE5, but it also acquired sensitivity to P
. The
Ki value of Chi16 for P
(3.6 nM) was
just 10-20-fold higher than the Ki values of native
PDE6
' reported previously (19, 32). Contacts between P
and the
PDE6
' catalytic domain outside of PDE6
'-(737-784) may account
for the lower Ki value of the native enzyme. The
noncatalytic cGMP-binding sites are allosterically coupled with the
P
-binding sites and may regulate P
affinity for the PDE catalytic
subunits (33-35). To test the role of the cGMP-binding domain,
PDE6
'-(737-784) was also replaced into the wild-type PDE5 sequence
(Chi17). P
inhibited Chi17 (Ki of 142 nM) less potently than Chi16, indicating that the
noncatalytic cGMP-binding domain of PDE6
', allosterically or due to
additional contacts, enhances the P
interaction with the catalytic domain.
C terminus to
the PDE6 catalytic domain blocks the access of cGMP to the catalytic
site. The P
C-terminal binding was also competitive with zaprinast.
We concluded that residues that participate in the binding/hydrolysis
of cGMP and the binding of competitive inhibitors are in a very close
proximity to the P
C-terminal binding residues in a
three-dimensional structure of PDE6 (16). In this study, an
introduction of the P
-binding site into the PDE5 catalytic domain
did not appreciably alter the catalytic properties. Therefore, the
residues that bind P
are not directly involved in binding/hydrolysis
of cGMP by PDE6, and they likely form a domain distinct from the
catalytic pocket. Both conclusions, proximity of the P
-site to and
its structural independence from the catalytic pocket, are supported by
the model of PDE6 catalytic site (Fig.
5). The model was generated based on the
recently determined structure of PDE4 catalytic domain, the first
crystal structure of a PDE enzyme (36). According to this model, the
P
-binding site, PDE6
'-(749-761), forms a loop near the entrance
to the catalytic cGMP-binding pocket. However, PDE6
'-(749-761)
residues do not participate in the formation of the catalytic cavity
itself. The latter is primarily assembled by residues conserved in the PDE superfamily. These residues include two histidines,
His561 and His597 (His238 and
His274 in PDE4), critical for coordination of two metal
ions (36) (Fig. 5). The two metal atoms, apparently a tightly bound
Zn2+ and a more loosely associated Mg2+, are
central to the hydrolysis of cyclic nucleotides by PDE6 (37).
Corresponding residues, His607 and His643, are
necessary for the metal support of catalysis in PDE5 (38). Another
important residue within the PDE6
' catalytic pocket is conserved
Gln771 (Fig. 5). The docking of cAMP into the PDE4
structure shows that a side chain of an analogous Gln443
hydrogen bonds with the 1-N and 6-NH2 groups of the adenine
base, but if the Gln443 amide group is rotated by
180° it may interact with the 1-NH and 6-CO groups of
cGMP (36). Gln443 in PDE4 is constrained by the interaction
with Tyr403 (36). The Tyr residue is substituted by
Gln729 and Gln765 in PDE6 and PDE5,
respectively, which appears to contribute to the cGMP substrate
specificity. The Gln765
Tyr substitution was among
several mutations that shifted the cGMP/cAMP selectivity of PDE5
(39).

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Fig. 5.
A model of the
PDE6
' catalytic domain. Left,
the model was generated with the Swiss-PdbViewer (40) using the
coordinates of the PDE4 structure as a template (36). The P
C-terminal binding site, P
-(749-761) (15), is shown in
red. The P
contact residues, Gln752 and
Met758 (red), the key catalytic metal-binding
residues, His561 and His597 (blue),
and the cGMP guanine ring binding residue, Gln771
(orange) are shown in
"ball-and-stick" representation. The image
was obtained using RasMol (version 2.6). Right, a
space-filling representation of the model, orientated as
left, with residues colored by multiple sequence alignment,
was generated using Protein Explorer 1.485 Beta. The multiple
sequence alignment CLUSTALW included PDEs from eight PDE families,
PDE1-6, -10, and -11. Identical residues are red, similar
residues are green, and different residues are
yellow.
'-(750-760) in Chi16
identified two mutants, Q752A and M758A, with impaired inhibition by
P
. The M758A substitution resulted in a particularly profound defect
of P
binding. Both mutants retained the catalytic properties (Km and kcat) for cGMP
hydrolysis and the IC50 values for inhibition by zaprinast
similar to those of Chi16, suggesting their intact overall folding. The
model of the PDE6
' catalytic domain shows that the side chains of
Gln752 and Met758 are solvent-exposed and are
similarly orientated on the surface of the molecule. Hence, in all
probability, these residues directly interact with P
. If the P
C
terminus is lined up along the plane formed by the side chains of
Gln752 and Met758, it may also make
a contact with Pro755. Our data do not rule out the
possibility of this contact. The P755A mutant had a significantly
reduced rate of cGMP hydrolysis, and therefore, its inhibition by P
might not be directly compared with that for Chi16. Out of the
residues, Met758 is located at the very tip of the
P
-binding loop facing the opening of the catalytic cavity. Such a
location of the P
-binding residue would allow P
to effectively
block the entry of cGMP into the catalytic pocket.
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ACKNOWLEDGEMENT
![]()
FOOTNOTES
To whom correspondence should be addressed. Tel.: 319-335-7864;
Fax: 319-335-7330; E-mail: nikolai-artemyev@uiowa.edu.
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ABBREVIATIONS

and P
,
,
, and
subunits of
rod PDE;
PDE6
',
' subunit of cone PDE;
PDE5, cGMP-binding,
cGMP-specific PDE (PDE5 family);
PCR, polymerase chain reaction.
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REFERENCES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
1.
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Baehr, W.,
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and Applebury, M. L.
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Hurley, J. B.,
and Stryer, L.
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Deterre, P.,
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