A Regulatory Hydrophobic Area in the Flexible Joint
Region of Plasminogen Activator Inhibitor-1, Defined with Fluorescent
Activity-neutralizing Ligands
LIGAND-INDUCED SERPIN POLYMERIZATION*
Rikke
Egelund
§,
Anja P.
Einholm
§,
Katrine E.
Pedersen
§,
Rasmus W.
Nielsen
,
Anni
Christensen
,
Johanna
Deinum¶, and
Peter A.
Andreasen
From the
Laboratory of Cellular Protein Science,
Department of Molecular and Structural Biology, Aarhus University,
8000 Aarhus C, Denmark, and ¶ AstraZeneca, R&D
Mölndal, 431 83 Mölndal, Sweden
Received for publication, October 3, 2000, and in revised form, December 15, 2000
 |
ABSTRACT |
We have characterized the neutralization of
the inhibitory activity of the serpin plasminogen activator inhibitor-1
(PAI-1) by a number of structurally distinct organochemicals, including compounds with environment-sensitive spectroscopic properties. In
contrast to latent and reactive center-cleaved PAI-1 and PAI-1 in
complex with urokinase-type plasminogen activator (uPA), active PAI-1
strongly increased the fluorescence of the PAI-1-neutralizing compounds
1-anilinonaphthalene-8-sulfonic acid and
4,4'-dianilino-1,1'-bisnaphthyl-5,5'-disulfonic acid. The fluorescence
increase could be competed by all tested nonfluorescent neutralizers,
indicating that all neutralizers bind to a common hydrophobic area
preferentially accessible in active PAI-1. Activity neutralization
proceeded through two consecutive steps as follows: first step is
conversion to forms displaying substrate behavior toward uPA, and
second step is to forms inert to uPA. With some neutralizers, the
second step was associated with PAI-1 polymerization. Vitronectin
reduced the susceptibility to the neutralizers. Changes in sensitivity
to activity neutralization by point mutations were compatible with the
various neutralizers having overlapping, but not identical, binding
sites in the region around
-helices D and E and
-strand 1A, known
to act as a flexible joint when
-sheet A opens and the reactive
center loop inserts as
-strand 4A during reaction with target
proteinases. The defined binding area may be a target for development
of compounds for neutralizing PAI-1 in cancer and cardiovascular diseases.
 |
INTRODUCTION |
Plasminogen activator inhibitor-1
(PAI-1)1 is a fast and
specific inhibitor of the serine proteinases urokinase-type (uPA) and
tissue-type plasminogen activator (tPA) and, as such, an important regulator of extracellular proteolysis in turn over of extracellular matrix and in fibrinolysis (for reviews see Refs. 1 and 2). PAI-1 binds
with high affinity to vitronectin (for reviews see Refs. 3 and 4) and
may regulate cell migration and adhesion by inhibition of vitronectin
binding of integrins and the uPA receptor (5-10). The PAI-1 level in
malignant tumors is one of the most informative biochemical markers of
a poor prognosis (for reviews see Refs. 11 and 12), and PAI-1 seems to
be causally involved in tumor invasion and angiogenesis (13). A high
PAI-1 level in blood plasma is a risk factor for ischemic
cardiovascular disease and venous thromboembolism (for review see Ref.
14). PAI-1 is therefore a potential target for both anti-cancer and anti-thrombotic therapy.
PAI-1 belongs to the serpin superfamily. Serpins are composed of 3
-sheets and 9
-helices. Serpins and their target proteinases form
stable complexes by interaction of the active site of the proteinases
with the reactive center peptide bond (P1-P1')
in the solvent-exposed, ~20-amino acid long peptide loop, the
reactive center loop (RCL) (for reviews see Refs. 2 and 15-17). There is both structural and biochemical evidence that complex formation is
associated with the P1-P1' bond being cleaved,
the active site Ser of the proteinase linked to the carboxyl group of
the P1 residue by an ester bond, the N-terminal part of the
RCL inserted as strand 4 of the large central
-sheet A (s4A), and
the proteinase translocated across the plane of
-sheet A, toward the
other pole of the molecule (18-27). Under specific in vitro
conditions, however, the ester bond is hydrolyzed, and the serpin
exhibits substrate behavior. This also leads to insertion of the
N-terminal part of the RCL as s4A (for a review see Ref. 2). RCL
insertion also takes place during transition to the inactive, latent
state, occurring spontaneously only in PAI-1 (28). Latent PAI-1 can be
reconverted to the active form by denaturation and refolding (29).
During RCL insertion, the so-called small serpin fragment, consisting
of s1A, s2A, s3A,
-helix F (hF) and the loop connecting hF and s3A
(the hF/s3A-loop), moves relative to the rest of the molecule, the
large serpin fragment, to make space for the RCL between s3A and s5A.
The regions around hD and hE were proposed to form a flexible joint
during RCL insertion (30) (Fig. 1). The
idea of flexibility of this region was supported by the observation that it contains a cluster of peptide bonds with differential susceptibility to nontarget proteinases in active, latent, and reactive
center-cleaved PAI-1 (31). Comparison of the x-ray crystal structures
of latent, active, and reactive center-cleaved PAI-1 (28, 32-34)
demonstrated directly the conformational changes. Vitronectin binds
near the flexible joint region (35-37) (see Fig. 1) and delays the
conversion of PAI-1 to the latent state (for reviews see Refs.
1-3).

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Fig. 1.
The three-dimensional structure of
s5A, the small serpin fragment, and the flexible joint region of active
PAI-1. Amino acids of relevance are shown in wire frame
presentations. The residues substituted in the triple mutant of
Björquist et al. (50) (Arg-97, Arg-136, and Arg-139)
are shown in red. The additional residues substituted in
this study (Pro-94, Arg-97, and His-98) are shown in blue.
Residues implicated in the binding of vitronectin (Phe-130, Met-131,
Leu-137, and Gln-144) (35) are indicated in green. The
figure is a RasMol display based on the coordinates of the x-ray
crystal structure of a quadruple mutant of PAI-1 in the active form
(33). Please notice that the RasMol program uses the same signature for
-helices and the short 310-helix found in the hF/s3A
loop.
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A number of compounds have been found to inhibit the reaction of PAI-1
with uPA and tPA (38-50). Among these are some organochemicals, including 1-dodecyl sulfuric acid (42, 43), the diketopiperazine derivative XR5118 (49), and the anthranilic acid derivative AR-H029953XX (50). The flexible joint region was implicated in the
PAI-1 neutralizing activity of the latter, by the demonstration that
Glu substitutions of three basic residues in hD and hE (see Fig. 1)
protected PAI-1 against activity neutralization (50).
We have now studied the mechanism of action of a few PAI-1-neutralizing
organochemicals, including the negatively charged AR-H029953XX and
1-dodecyl sulfuric acid and the positively charged XR5118. Basic
biochemical knowledge about the mechanism of PAI-1 neutralization is
necessary for development of clinically applicable inhibitors of PAI-1
function in cancer and cardiovascular diseases. We have characterized
neutralizer binding sites and neutralizer-induced molecular changes of
PAI-1.
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EXPERIMENTAL PROCEDURES |
PAI-1--
PAI-1 residues were numbered by the
1-proteinase inhibitor (
1PI) template
numbering system, based on the alignment of PAI-1 and
1PI by Huber and Carrell (15).
Natural human PAI-1 was purified in the latent form from serum-free
conditioned medium of dexamethasone-treated HT-1080 cells by
immunoaffinity chromatography (43). Wild type (wt) human PAI-1 was
expressed in the Escherichia coli strain TG1 by the use of
the expression vector pAlter®-Ex1 and purified from bacterial lysates
by ion exchange chromatography on a CM-50 Sephadex column (51),
followed by immunoaffinity chromatography (43). Amino acid sequencing
of the purified protein gave the expected, slightly modified N-terminal
sequence MHVHPPSYVAHL. Expression of recombinant wt and mutant human
PAI-1 in the yeast Pichia pastoris and its purification from
the conditioned medium in the latent form were performed as described
(52). Human wt and PAI-1 R97E/R136E/R139E were expressed in CHO cells
as before (50).
Latent PAI-1 was converted to the active form by denaturation in 4 M guanidinium chloride and refolding by extensive dialysis against phosphate-buffered saline (PBS; 0.01 M sodium
phosphate, pH 7.4, 0.15 M NaCl) at 0 °C. Active PAI-1
was stored at
80 °C. Reactive center-cleaved PAI-1 (form C) and
uPA·PAI-1 complex were prepared as described (31).
uPA--
Human uPA was purchased from Wakamoto Pharmaceutical
Co., Tokyo, Japan. Low molecular weight uPA (LMW-uPA), with N terminus at Lys-136, was prepared as described (53). The molar concentrations of
active native and LMW-uPA were determined by active site titration with
p-nitrophenyl-guanidinobenzoate.
Miscellaneous Proteins and Materials--
Human
vitronectin, in its multimeric form, was from Becton Dickinson (Le
Pont-de-Claix, France). Bovine serum albumin (BSA),
-galactosidase,
and porcine gelatin were from Sigma. Restriction enzymes and other
materials for DNA technology were as described (52). Oligonucleotides
were purchased from DNA Technology (Aarhus, Denmark). AR-H029953XX was
described before (50). XR5118
(3Z,6Z)-6-benzylidene-3-(2-dimethylaminoethyl-thio)-2-(thienyl)methylene-2,5-piperazinedione hydrochloride (49) was a kind gift from Dr. Thomas Frandsen, Finsen
Laboratory, Copenhagen, Denmark. The following chemicals were purchased
from the indicated sources: anthranilic acid (2-aminobenzoic acid),
1-decanesulfonic acid, decanoic acid, dodecanoic acid, deoxycholic
acid, flufenamic acid
(N-(3-(trifluoromethyl)phenyl)anthranilic acid),
1-nonanesulfonic acid, 2-propylpentanoic acid, and suramin (Sigma); ANS
(1-anilinonaphthalene-8-sulfonic acid), bis-ANS
(4,4'-dianilino-1,1'-bisnaphthyl-5,5'-disulfonic acid, dipotassium
salt), 2-anilinonaphthalene-6-sulfonic acid, and DapoxylTM
sulfonic acid (Molecular Probes, Eugene, OR); the sodium salt of
1-dodecyl sulfuric acid (Merck); 1,3,6-naphthalenesulfonic acid (Acros
Organics, Geel, Belgium); pyro-Glu-Gly-Arg-p-nitroanilide (S-2444) (Chromogenix, Mölndal, Sweden); blue dextran (Amersham Pharmacia Biotech). All other materials were of the best grade available.
Fluorescence Measurements--
Fluorescence emission spectra for
ANS and bis-ANS in the absence and presence of PAI-1 were recorded with
a SFM 25 spectrofluorimeter (Kontron Instruments), using excitation
wavelengths of 386 and 395 nm, respectively. The emission was recorded
over the range of 400-600 nm. The change in fluorescence was measured
about 10 min after mixing PAI-1 with the fluorescent ligands in a
buffer of 0.1 M Tris-HCl, pH 8.1, at 14 °C, unless
otherwise indicated. The observed fluorescence intensities,
Fobs, were corrected for the dilution effect of
the added ANS and bis-ANS solutions, for the low background
fluorescence of ANS and bis-ANS in buffer alone, and for the inner
filter effect of the varying concentrations of ANS and bis-ANS. The
correction for the inner filter effect was performed using the
equation F = Fobs·((2.303·
Ex·[ANS or
bis-ANS]T)/(1-10

Ex·[ANS
or bis-ANS]T)), where 
Ex is
the molar extinction coefficient of ANS and bis-ANS at the excitation
wavelength; [ANS or bis-ANS]T is the total concentration of
ANS or bis-ANS; and F and Fobs are the corrected and the observed fluorescence intensities, respectively (54).
Estimation of the parameters for bis-ANS-PAI-1 binding was initiated by
determination of the fluorescence intensity per 1 M
PAI-1-bound bis-ANS, FM, as the slope of the line
relating the fluorescence intensity at 480 nm to the bis-ANS
concentration at 6 µM PAI-1 and bis-ANS concentrations
below 6 µM. The concentrations of PAI-1-bound bis-ANS at
any PAI-1 and bis-ANS concentrations were then calculated from
the fluorescence intensity measured at these conditions by
Equation 1,
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(Eq. 1)
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The concentration of free bis-ANS, [bis-ANS]F, was
calculated by subtracting [bis-ANS]B from the total bis-ANS
concentration. Assuming a simple binding equilibrium, the dissociation
constant Kd for bis-ANS-PAI-1 binding and the total
concentration of bis-ANS-binding sites, [binding site]T, were
determined by nonlinear regression analysis of plots of
[bis-ANS]B versus [bis-ANS]F on the
basis of the Equation 2,
|
(Eq. 2)
|
The estimation of Kd for ANS-PAI-1 binding
was obtained by measuring the fluorescence intensity at 470 nm at
several ANS concentrations ([ANS]T) in the presence of 1 µM PAI-1 and expressing them as RFI1,
i.e. a fraction of the fluorescence intensity at saturating
ANS concentrations. Assuming a simple binding equilibrium, one arrives
at Equation 3,
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(Eq. 3)
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Therefore, Kd could be determined by
nonlinear regression analysis of plots of RFI1
versus the [ANS]T values on the basis of Equation 3.
Estimation of the dissociation constants for nonfluorescent
neutralizers was done by competition studies, in which 0.5 or 1 µM PAI-1 was preincubated with ANS (100 µM), and the fluorescence intensity at 470 nm was then
recorded 10 min after addition of nonfluorescent competitors in various
concentrations. The fluorescence intensity at
max was
expressed relative to that obtained in the absence of nonfluorescent
competitor (RFI2). Assuming competition of fluorescent and
nonfluorescent ligands for binding to one site, an excess of
nonfluorescent ligand I over PAI-1, and simple binding equilibria for
both ANS and I, the following Equation 4 is true.
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(Eq. 4)
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Ki is the dissociation constant for I-PAI-1
binding; Kd the dissociation constant for ANS-PAI-1
binding; [ANS]T the total ANS concentration; and
[I]T the total I concentration. Thus, the
Ki values were obtained by nonlinear regression
analysis of plots of RFI2 versus [I]T on the basis of Equation 4, the Kd for ANS binding
having been determined in advance.
Measurements of the Effects of Neutralizers on Specific
Inhibitory Activity of PAI-1--
The specific inhibitory activity of
PAI-1, i.e. the fraction of the total amount of PAI-1
forming a stable complex with uPA at the conditions used, was measured
by titration of PAI-1 against uPA in a peptidyl anilide assay, in the
presence of several concentrations of each neutralizing compound.
Shortly, PAI-1 was serially diluted with a buffer of 0.1 M
Tris-HCl, pH 8.1, 0.25% gelatin at 37 °C, corresponding to
concentrations between 0.02 and 40 µg/ml and a volume of 100 µl. To
each dilution series, a particular neutralizing compound was added in a
particular concentration and incubated with PAI-1 for 10 min at
37 °C. Portions of uPA solutions of the same temperature and in the
same buffer were then added, corresponding to a final uPA concentration
of 0.25 µg/ml, a final volume of 200 µl, and final PAI-1
concentrations between 0.01 and 20 µg/ml. Incubation was then
continued until the process of inhibition of uPA had come to an end.
Control experiments showed that this was in all cases achieved in less
than 2 min. The remaining uPA enzyme activity was determined by
incubation with the peptidyl anilide substrate S-2444 at 37 °C and
measurement of the increase in absorbance at 405 nm. The specific
inhibitory activity of PAI-1 was calculated from the amount of PAI-1
that had to be added to inhibit 50% of the 0.25 µg/ml uPA. The
IC50 values for the compounds being tested, i.e.
the concentrations causing a 50% reduction in the PAI-1 specific
inhibitory activity, were determined from plots of the specific
inhibitory activity against the concentration of the compounds in the
final assay mixture.
Measurement of Time Course of Changes in the Specific Inhibitory
Activity of PAI-1--
PAI-1 was incubated at various concentrations
between 0.33 and 330 µg/ml in 0.1 M Tris-HCl, pH 8.1, 0.25% gelatin, at 0 or 37 °C, without or with neutralizers. After
various times, samples were removed for assay of specific inhibitory
activity, which in this case was performed by diluting all samples to a
final PAI-1 concentration of 0.33 µg/ml, using the same buffer and
the same temperature as in the original incubation. uPA was added to a
final concentration equivalent to 90% of the activity of PAI-1 in the
absence of neutralizers. The uPA solutions were without or with BSA in
a concentration corresponding to a final concentration, in the assay,
of 1%. After incubation for a time sufficient for the process of
inhibition of uPA to come to an end (2 min), the remaining uPA activity
was estimated with S-2444 and used to calculate the specific inhibitory
activity of PAI-1 in the samples.
Analysis of Functional Behavior of PAI-1 by Reaction with LMW-uPA
and SDS-PAGE--
After incubation at various conditions, samples of 5 µg PAI-1 were mixed with 10 µg LMW-uPA. After 2 min, the samples
were precipitated with trichloroacetic acid and subjected to SDS-PAGE in gels with 6-16% polyacrylamide. The gels were stained with Coomassie Blue. In this analysis, inhibitory active PAI-1 will be
recovered as a complex with LMW-uPA. PAI-1 exhibiting substrate behavior will be recovered as the large N-terminal fragment produced by
reactive center cleavage, whereas the only 33 amino acid long C-terminal fragment will not be recovered by the gel system used here.
Inert PAI-1, for instance the latent form, will be recovered in the
position of native full-length PAI-1 (45). Control experiments (not
shown) ensured that no further changes in the reaction between PAI-1
and LMW-uPA occurred by prolonging the incubation time beyond the
routinely used 2 min.
Gel Filtration--
PAI-1 was analyzed by fast protein liquid
chromatography gel filtration on a Superdex 200 HR10/30 column
(Amersham Pharmacia Biotech) in 0.1 M Tris-HCl, pH 8.1, 0.5 M NaCl at 4 °C, using a flow rate of 0.4 ml per min. The
following marker proteins were used: BSA (Mr
67,000), murine IgG (Mr 150,000), and
-galactosidase (Mr 540,000). The void volume
was determined with blue dextran. Before the chromatography, the
samples were passed through a layer of 200 µl of BSA-coupled
Sepharose 4B and a filter with a pore size of 0.22 µm, resulting in
removal of more than 98% of the organochemicals present in the
samples. A quantitative estimation of the distribution of PAI-1 between
polymer and monomer peaks was obtained by cutting out the areas
representing the peaks on the recordings of A280
and weighing them.
Native Gel Electrophoresis--
The electrophoresis was
performed at 4 °C in gradient gels with 5-15% polyacrylamide, in
the absence of SDS (55). Coomassie Blue was added to the cathode buffer
to a final concentration of 0.02% (56). The following marker proteins
were used: BSA (Mr 67,000), beef heart lactate
dehydrogenase (Mr 140,000), beef liver catalase
(Mr 232,000), horse spleen ferritin
(Mr 440,000), and hog thyroid thyroglobulin
(Mr 669,000).
Molecular Graphics--
RasMol version 2.6 (Roger Sayle, Glaxo
Research and Development, Greenford, Middlesex, UK) was used to display
three-dimensional protein structures. The coordinate (Protein Data
Bank) files corresponding to the x-ray crystal structure of active
PAI-1 (33) were kindly provided by Dr. R. J. Read, Cambridge, UK.
Statistical Analysis--
Data were evaluated by Student's
t test, and differences in results with a p value
below 0.005 were considered statistically significant. Nonlinear
regression analysis, by the method of least squares, were performed by
the SigmaPlot program (Jandel Scientific Software, San Rafael, CA).
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RESULTS |
Neutralization of the Inhibitory Activity of PAI-1 by Various
Compounds--
We measured the IC50 values for the effect
on the specific inhibitory activity of PAI-1 of a variety of
amphipathic compounds, including the negatively charged PAI-1
neutralizers 1-dodecyl sulfuric acid and AR-H029953XX (42, 43, 50) and
the positively charged PAI-1 neutralizer XR5118 (49). About half of the
compounds tested were found to neutralize PAI-1 in the concentration
ranges used, with IC50 values between 0.6 and 300 µM (Fig. 2).

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Fig. 2.
IC50 for several compounds for
neutralization of PAI-1 inhibitory activity. The data shown are
means and S.D. from the indicated numbers of determinations of the
IC50 values for the effects of the indicated compounds on
the specific inhibitory activity of HT-1080 PAI-1.
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Routinely, the assays were performed with guanidinium
chloride-activated HT-1080 PAI-1, but the compounds also neutralized guanidinium chloride-activated P. pastoris PAI-1,
guanidinium chloride-activated CHO cell PAI-1, and spontaneously active
E. coli PAI-1 (see also below). Routinely, we performed the
experiments at pH 8.1, but the same results were obtained at pH 7.4 (data not shown).
ANS, AR-H029953XX, bis-ANS, 1-dodecyl sulfuric acid, and XR5118 were
selected for further characterization, ANS and bis-ANS because the
fluorescence of these compounds generally increases at transfer from a
hydrophilic to a hydrophobic environment (57) and they therefore can be
used for fluorimetric binding assays, AR-H029953XX, bis-ANS, 1-dodecyl
sulfuric acid, and XR5118 because of their relatively low
IC50 values.
Fluorimetric Analysis of Neutralizer-PAI-1 Binding--
In the
presence of 1 µM active PAI-1, the fluorescence emission
intensities of ANS in concentrations above 10 µM and of
bis-ANS in concentrations above 0.1 µM were strongly
increased over those attained in the absence of protein. The
wavelengths with maximal fluorescence intensity (
max)
shifted from 490 to 470 nm for ANS and from 490 to 480 nm for bis-ANS.
In contrast, only a small fluorescence increase was observed with 1 µM latent, 1 µM reactive center-cleaved,
and 1 µM uPA-complexed PAI-1 (Fig.
3). These observations are consistent
with ANS and bis-ANS binding to a hydrophobic area preferentially
accessible in active PAI-1.

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Fig. 3.
Effect of PAI-1 on the fluorescence emission
spectra of ANS and bis-ANS. The fluorescence emission spectra for
ANS and bis-ANS in the indicated concentrations were recorded at
14 °C in the presence of 1 µM of the indicated forms
of HT-1080 PAI-1, using excitation wavelengths of 386 and 395 nm,
respectively.
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At PAI-1 concentrations above 5 µM and bis-ANS
concentrations below 5 µM, the fluorescence intensity of
bis-ANS at 480 nm was independent of the PAI-1 concentration, showing
that practically all added bis-ANS was bound to PAI-1 at these
conditions. Therefore, the fluorescence intensity per 1 M
bound bis-ANS, FM, could be determined from the
bis-ANS concentration dependence of the fluorescence intensity at these
conditions (Fig. 4A). It was
then possible to use fluorescence intensity measurements to estimate
the concentrations of bound and free bis-ANS in the presence of lower
PAI-1 concentrations (0.125-1 µM), at which there is an
equilibrium between bound and free ligand. By analysis of the relationship between bound and free bis-ANS, we found a
Kd of 0.57 ± 0.29 µM and a
number of binding sites per PAI-1 molecule of 1.66 ± 0.62 (n = 12) (Fig. 4B and Table
I).

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Fig. 4.
Concentration dependence of binding of
bis-ANS to PAI-1, as determined by fluorimetry. A, the
molar fluorescence intensity of PAI-1-bound bis-ANS,
FM, was determined from the slope of the line
relating fluorescence intensity and the concentration of added bis-ANS
at an HT-1080 PAI-1 concentration of 6 µM. B,
FM was used to calculate [bis-ANS]B from
the fluorescence intensities with several total bis-ANS concentrations
in the range from 0 to 6 µM, at HT-1080 PAI-1
concentrations of 0.25, 0.5, and 1 µM, respectively. The
[bis-ANS]B values were plotted versus the
[bis-ANS]F values. The parameters of the curves drawn were
obtained by nonlinear regression analysis of the data points according
to Equation 2. The estimated Kd and [binding
site]T/[PAI-1] values in the experiments shown were 0.27 µM and 1.16 with 0.25 µM PAI-1; 0.34 µM and 1.22 with 0.5 µM PAI-1; and 0.43 µM and 1.51 with 1 M PAI-1. The results of
several experiments are summarized in the text and Table I.
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Table I
Dissociation constants for binding of neutralizers to PAI-1
The dissociation constants were determined either as
Kd values by analysis of the fluorescence increase
associated with the binding of ANS and bis-ANS to HT-1080 PAI-1 or as
Ki values by analysis of the competition of ANS
binding to HT-1080 PAI-1 by the nonfluorescent compounds (AR-H029953XX,
1-dodecyl sulfuric acid, 1-nonanesulfonic acid, 2-propylpentanoic acid,
and XR5118). Further details are given in the text. The data are given
as means, S.D., and numbers of experiments.
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With ANS, only a small fraction of the ligand added to µM
concentrations of PAI-1 was bound to the protein, rendering
calculations of the stoichiometry impossible. However, an estimate of
the Kd was obtained by studying the ANS
concentration dependence of the fluorescence intensity in the presence
of PAI-1 (Table I).
To measure the dissociation constants for the binding to PAI-1 of the
nonfluorescent neutralizers, PAI-1 was preincubated with 100 µM ANS, and the fluorescence intensity was recorded after addition of increasing concentrations of the nonfluorescent compounds. AR-H029953XX, 1-dodecyl sulfuric acid, or XR5118 caused a decrease in
the ANS fluorescence intensity down to background levels. In contrast,
two non-neutralizing, nonfluorescent compounds, 1-nonanesulfonic acid
and 2-propylpentanoic acid, caused very little inhibition of the
fluorescence in concentrations up to 1 mM (Fig.
5). Ki values for the
nonfluorescent compounds were determined by analysis of the
displacement curves (Table I).

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Fig. 5.
Competition between ANS and other
neutralizers for binding to PAI-1, as analyzed by fluorimetry.
HT-1080 PAI-1 was preincubated with 100 µM ANS. The
fluorescence intensity at 470 nm was recorded 10 min after addition of
the indicated neutralizers in the indicated concentrations. The
RFI2 values (defined by Equation 4) were plotted
versus the concentrations of the nonfluorescent
neutralizers. The parameters of the lines drawn were obtained by
nonlinear regression analysis of the data according to Equation 4,
using a Kd value for ANS binding of 78 µM (see Table I) and [ANS]T = 100 µM. The estimated Ki values in the
experiments shown are as follows: AR-H029953XX, 0.65 µM;
1-dodecyl sulfuric acid, 33 µM; XR5118, 3.9 µM. The results of several experiments with each compound
are summarized in Table I.
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Similar competition experiments were done with bis-ANS. The results
obtained (not shown) were in full agreement with those obtained with
ANS.
The fluorimetrically determined dissociation constants for ANS,
bis-ANS, 1-dodecyl sulfuric acid, and XR5118 (Table I) were not
significantly different from the corresponding IC50 values (Fig. 2). Only in the case of AR-H029953XX, the dissociation constant was somewhat lower than the IC50 value. This disagreement
may be related to the irreversible reaction of PAI-1 with uPA
leading to dissociation of AR-H029953XX·PAI-1 complex during the
determination of PAI-1-specific inhibitory activity.
The results of the fluorimetric analyses are most readily explained by
the hypothesis that all the tested neutralizers have overlapping
binding sites.
Analysis of Activity Neutralization by Site-directed
Mutagenesis--
The five neutralizers were tested on a series of
PAI-1 variants, expressed in P. pastoris or CHO cells (Table
II). The IC50 values for
neutralization of P. pastoris and CHO PAI-1 wt were not
significantly different from those for neutralization of HT-1080 PAI-1.
The susceptibility to the neutralizers was changed by substitution of
specific amino acids in the flexible joint region. The P94K substitution, in hD (see Fig. 1), caused a 10-fold increase in the
IC50 for XR5118 but had no effects on the IC50
for the negatively charged neutralizers. The double substitution
R97K/H98K was without effect. The triple substitution
R97E/R136E/R139E (see Fig. 1) increased the IC50- value for
AR-H029953XX from about 5 µM to more than 20 µM and increased the IC50 values for ANS-,
bis-ANS-, and 1-dodecyl sulfuric acid neutralization about 3-fold, but
did not affect the IC50 value for XR5118 neutralization.
Conclusively, the IC50 values for all neutralizers were
sensitive to mutations in the flexible joint region, consistent with
the conclusion from the fluorimetric measurements of these compounds
having overlapping binding sites. Still, the substitutions in the
flexible joint region affecting the susceptibility to the negatively
charged neutralizers had no effect on the susceptibility to the
positively charged neutralizer and vice versa.
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Table II
Effect of PAI-1 neutralizers on PAI-1 variants
The IC50 values (µM) for the effect of the
neutralizers on the specific inhibitory activities of the PAI-1
variants expressed in P. pastoris or CHO cells were
estimated. The data given are means and S.D. from the indicated numbers
of experiments. 1-DS, 1-dodecyl sulfuric acid.
|
|
Competition between Vitronectin and PAI-1
Neutralizers--
Preincubation of PAI-1 with vitronectin decreased
its susceptibility to all five neutralizers but to a variable extent.
Thus, the IC50 value for bis-ANS increased about 50-fold,
to 27 ± 9 µM (n = 3), but the
IC50 value for 1-dodecyl sulfuric acid increased only about
7-fold, to 110 ± 4 µM (n = 4). The
IC50 value for XR5118 increased to more than 250 µM and that for ANS to more than 1000 µM.
Time Course of Changes of PAI-1-specific Inhibitory
Activity--
The PAI-1-specific inhibitory activity was
determined after incubations for various times at 0 or 37 °C, at
various PAI-1 concentrations, without or with neutralizers in
concentrations of severalfold the IC50 values and
severalfold the PAI-1 concentrations. To distinguish between reversible
and irreversible neutralization, we took advantage of the fact that
none of the five neutralizers affected PAI-1 in buffers with 1% BSA
(data not shown), in agreement with the ability of BSA to bind several
molecules of a variety of hydrophobic compounds (58, 59). Accordingly,
the assays of the specific inhibitory activity were performed as
follows: 1) in the presence of a neutralizer concentration equal to
that used in the incubation (reversible plus irreversible
neutralization); and 2) in the presence of 1% BSA, the BSA being added
at the same time as uPA, to remove free and reversibly bound
neutralizers (irreversible neutralization).
Without neutralizers, active PAI-1 lost its activity, due to conversion
to the latent form, with a half-life of 44 ± 9 min (n = 6) at 37 °C and of more than 5 days at 0 °C,
without or with BSA in the assay and independently of the PAI-1
concentration (data not shown).
Fig. 6 shows representative experiments
on the time course of neutralizer-induced activity loss, with 1-dodecyl
sulfuric acid. By using assays without BSA, more than 85% of the PAI-1
activity was lost in less than 5 min at 0 as well as 37 °C. By using
assays with BSA, the activity loss was slower and less complete. The PAI-1 activity measured in the assays with BSA did not change by
increasing the BSA concentration from the routinely used 1% to 5% or
by prolonging the incubation time with BSA, before the addition of uPA,
from 0 to 10 min, indicating that the large excess of BSA rapidly
removed both free and PAI-1-bound neutralizer. A relatively fast and a
relatively slow activity loss could therefore be distinguished, the
fast one requiring the continued presence of neutralizer and the slow
one being irreversible upon removal of neutralizer. The rate of the
irreversible activity loss increased with increasing temperature and
increasing PAI-1 concentration. Thus, the rate-limiting step of the
irreversible activity loss seemed to be bi- or multimolecular.

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Fig. 6.
Effect of temperature and PAI-1 concentration
on the time course of neutralization of PAI-1 activity by 1-dodecyl
sulfuric acid, assayed in the absence or the presence of BSA.
HT-1080 PAI-1, in the indicated concentrations, was incubated at the
indicated temperatures in the presence of 50 µM 1-dodecyl
sulfuric acid. At the indicated time points, samples were taken for
determination of PAI-1-specific inhibitory activity, in the absence or
the presence of 1% BSA, as indicated. The specific inhibitory activity
at time 0 was set equal to 1, and the specific inhibitory activities at
the other time points expressed as fractions thereof. The data points
represent means and S.D. for at least three independent
experiments.
|
|
The time courses of the activity losses induced by the other negatively
charged neutralizers had the same characteristics. Only, the rate of
the ANS-induced irreversible activity loss did not depend on the PAI-1
concentration, indicating that the rate-limiting step was monomolecular
in this case (data not shown).
The time course of the activity loss induced by the positively charged
XR5118 was not significantly different in assays without and with BSA,
showing that the XR5118-induced activity loss was totally irreversible.
The rate of XR5118-induced activity loss was strongly
temperature-dependent. We found no evidence that the rate
of XR5118-induced neutralization increased with increasing PAI-1
concentration, suggesting that the neutralization process proceeded
monomolecularly (data not shown).
Analysis of the Functional Behavior of Neutralizer-induced Forms of
PAI-1 by Reaction with LMW-uPA and SDS-PAGE--
The effect of the
neutralizers on the functional behavior of PAI-1 was analyzed by
reacting neutralizer-treated PAI-1 with a molar excess of LMW-uPA and
separating the reaction products by SDS-PAGE. A representative
experiment, with bis-ANS, is shown in Fig.
7. Without incubation with neutralizers,
most of the PAI-1 formed a stable complex with LMW-uPA, whereas minor
fractions were latent or exhibited substrate behavior, respectively
(Fig. 7, lane to the left). Complex formation was totally
abolished within 2 min of incubation of PAI-1 with bis-ANS at 37 °C.
An inactive form with substrate behavior predominated for the first 2 min, after which time PAI-1 was gradually converted to an inert form.
At 0 °C, complex formation was abolished more slowly, and substrate
behavior predominated for at least 2 h (data not shown). Identical
observations were done with ANS, AR-H029953XX, and 1-dodecyl sulfuric
acid. Neutralization by the positively charged XR5118 was at 0 °C
associated with a fast conversion to a form with a substrate behavior,
followed by conversion to an inert form, but at 37 °C, there was no
detectable increase in substrate behavior, but an immediate increase in
the amount of the inert form (data not shown). HT-1080 PAI-1 and
E. coli PAI-1 reacted in the same manner to all neutralizers
(data not shown).

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Fig. 7.
Analysis of the effect of bis-ANS on the
functional behavior of PAI-1 by SDS-PAGE. E. coli
PAI-1, 20 µg/ml in a buffer of 0.1 M Tris-HCl, pH 8.1, was incubated with 5 µM bis-ANS at 37 °C. After
incubation for the indicated times, samples corresponding to 5 µg of
PAI-1 were taken and incubated with 10 µg of LMW-uPA for 2 min at
37 °C at a PAI-1 concentration of 20 µg/ml and an LMW-uPA
concentration of 40 µg/ml. The samples were then subjected to
SDS-PAGE. The positions of LMW-uPA·PAI-1 complex, native/inert PAI-1,
reactive center-cleaved PAI-1 (RCC-PAI-1), and LMW-uPA are
indicated to the left.
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|
Characterization of Neutralizer-induced PAI-1 Forms by Gel
Filtration--
PAI-1 was preincubated at 0 or 37 °C in the absence
or the presence of neutralizers, for practical reasons with a
relatively high PAI-1 concentration (330 µg/ml), before being
analyzed by gel filtration. Without neutralizers, both latent and
active PAI-1 migrated as one major symmetrical peak, in a position
which by comparison to the migration of the marker proteins was that
expected for monomeric PAI-1 (Fig.
8).

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Fig. 8.
Characterization of neutralizer-induced PAI-1
forms by gel filtration. Fifty-µg portions of HT-1080 PAI-1, in
active form, were subjected to gel filtration. Conditions of
preincubation of PAI-1 (in a concentration of 330 µg/ml or 6 µM in PBS) before the gel filtration are indicated on
each elution profile. The organochemicals were added in the following
concentrations: ANS, 500 µM; AR-H029953XX, 20 µM; bis-ANS, 5 µM; 1-dodecyl sulfuric acid,
100 µM; XR5118, 30 µM. The absorbance at
280 nm (A280) is shown versus the
elution time. The migration of the marker proteins BSA
(Mr 67,000), murine IgG
(Mr 150,000), and -galactosidase
(Mr 540,000) are indicated by arrows
above the profiles. V0, void volume; no
add., no additions; no inc., no incubation;
AR, AR-H029953XX; 1-DS, 1-dodecyl sulfuric
acid.
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|
Preincubation of active but not latent PAI-1 with ANS, AR-H029953XX,
bis-ANS, or 1-dodecyl sulfuric acid resulted in conversion of PAI-1 to
larger species, the sizes of which increased with increasing incubation
time, with a strongly temperature-dependent rate. Eventually, about
85% of the material migrated in the void volume (Fig. 8 and data not
shown). Five hundred µM of the negatively charged, but
non-neutralizing 1-nonanesulfonic acid and 2-propylpentanoic acid did
not induce polymerization (data not shown). We concluded that the
negatively charged neutralizers were able to induce PAI-1 polymerization.
In contrast, the positively charged XR5118 did not cause polymerization
(Fig. 8). Moreover, preincubation with XR5118 inhibited the
polymerization induced by bis-ANS (Fig.
9) or any of the other negatively charged
neutralizers (data not shown). Analyzing the XR5118 concentration
dependence of the inhibition under the assumption of competition
between XR5118 and the negatively charged neutralizers for a single
binding site, a Ki value could be calculated that
agreed well with the fluorimetrically determined dissociation constant
for XR5118 binding (Fig. 9 and Table I).

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Fig. 9.
Analysis of XR5118 competition of
bis-ANS-induced PAI-1 polymerization. Fifty-µg portions of
HT-1080 PAI-1 (330 µg/ml or 6 µM) were incubated in PBS
at 37 °C for 30 min in the presence of the indicated concentrations
of XR5118. This was followed by incubation at 37 °C for 30 min
without further additions or with 5 µM bis-ANS. The
portions were then subjected to gel filtration on a Superdex 200 HR10/30 column in a buffer of 0.1 M Tris-HCl, pH 8.1, 0.5 M NaCl. The fraction of polymerized material at a given
concentration of XR5118 (Px) was corrected for the
background of polymerized material (P0) and
divided by the fraction of polymerized material after preincubation
with bis-ANS alone, likewise corrected (Pb P0). The (Px P0)/(Pb P0) values were plotted versus the
XR5118 concentration. The Ki value for XR5118
inhibition of polymerization could be calculated from the XR5118
concentration causing half-maximal inhibition of polymerization (56 µM), the Kd value for bis-ANS binding
(0.57 µM), and the equation (Px P0)/(Pb P0) = (Kd,
bis-ANS + [bis-ANS])/(Kd,
bis-ANS + [bis-ANS] + (Kd,
bis-ANS/Ki,
XR5118)[XR5118]) (which is analogous to Equation 4 in the
text). In the experiment shown, the calculated Ki
was 2.8 µM.
|
|
A representative analysis of the functional behavior of PAI-1 in
individual peaks of the gel filtration profiles is shown in Fig.
10. PAI-1 was incubated with 1-dodecyl
sulfuric acid for 30 min at 0 or 37 °C before gel filtration, both
incubations leading to complete neutralization when assayed in the
continued presence of neutralizer. The polymeric forms in the gel
filtration profile had little or no inhibitory activity, and with
increasing size, they contained an increasing fraction of inert PAI-1.
The monomeric peak seen after preincubation at 0 oC had
regained an activity similar to that of PAI-1 not exposed to
neutralizers, whereas the small monomeric peak left after incubation at
37 °C was devoid of activity. It should be noticed that at least a
fraction of the inert material in the monomeric peak is latent PAI-1
contaminating the preparation from the start.

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Fig. 10.
Analysis of 1-dodecyl sulfuric acid-induced
PAI-1 forms by gel filtration and SDS-PAGE. HT-1080 PAI-1 (330 µg/ml) was incubated with 100 µM 1-dodecyl sulfuric
acid for 30 min at 0 or 37 °C, as indicated. Two hundred-µg
portions were then subjected to gel filtration. The absorbance at 280 nm is shown versus the elution time. Five-µg portions of
PAI-1, either before gel filtration or from individual peaks of the gel
filtration profile, were reacted with 10 µg of LMW-uPA for 2 min at
37 °C and then subjected to SDS-PAGE. The positions of
LMW-uPA·PAI-1 complex, native/inert PAI-1, reactive center-cleaved
PAI-1 (RCC-PAI-1) and LMW-uPA are indicated to the
left.
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|
Characterization of Neutralizer-induced Forms of PAI-1 by Native
Gel Electrophoresis--
PAI-1 was subjected to native polyacrylamide
gel electrophoresis after incubation at a concentration of 330 µg/ml
for 30 min at 37 °C without or with neutralizers (Fig.
11). Without neutralizers, PAI-1
migrated mainly as a monomer in the expected position relative to the
Mr markers. With the negatively charged
neutralizers, but not with XR5118, most PAI-1 was converted to
distinct, slower migrating bands. By comparison to the migration of the
markers, the PAI-1 bands seem to represent dimers, trimers, tetramers, etc. The gel system did not allow resolution of polymer species with an
Mr above ~300,000. We concluded that PAI-1
neutralization by the negatively charged neutralizers, but not XR5118,
is associated with formation of distinct PAI-1 polymers.

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Fig. 11.
Characterization of neutralizer-induced
PAI-1 forms by native gel electrophoresis. Ten-µg portions of
HT-1080 PAI-1 (330 µg/ml) were incubated for 30 min at 37 °C in
the absence or presence of neutralizers, as indicated. They were then
subjected to native polyacrylamide gel electrophoresis. The migrations
of the marker proteins are indicated to the left.
1-DS, 1-dodecyl sulfuric acid.
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|
A Two-step Neutralization Mechanism--
Comparing the time course
of the change of PAI-1-specific inhibitory activity (Fig. 6), the time
course of the changes in the functional behavior (Fig. 7), the time
course of polymerization (Fig. 8), and the functional behavior of
individual peaks of the gel filtration profiles (Fig. 10), we concluded
that PAI-1 neutralization follows variations over a basic two-step
mechanism, by which neutralizer-complexed PAI-1 (N~PAI-1) is rapidly
converted to a form exhibiting substrate behavior
(N~PAI-1S) and subsequently to an inert form
(N~PAI-1I):
With the negatively charged neutralizers AR-H029953XX, bis-ANS,
and 1-dodecyl sulfuric acid, the first step is reversible upon removal
of the neutralizer, as evidenced by the recovery of specific inhibitory
activity in assays with BSA (Fig.6) and the reappearance of inhibitory
activity in the monomer peak of the gel filtration profile (Fig. 10),
whereas the second step consists of an irreversible polymerization, as
evidenced by the absence of inhibitory activity of the polymer peaks of
the gel filtration profiles and the PAI-1 concentration dependence of
the rate of loss of specific inhibitory activity in assays with BSA
(Fig. 6). The fact that the time course of the irreversible
neutralization by ANS was independent of the PAI-1 concentration
suggests the existence of an intermediate, irreversibly inactivated
monomeric form of ANS-complexed PAI-1, which subsequently polymerizes.
XR5118-induced neutralization seemed to proceed by two irreversible
conversions, neither of which involves polymerization.
 |
DISCUSSION |
On the basis of the fluorimetric binding assays and the
site-directed mutagenesis studies reported here, we concluded that four
negatively charged (ANS, AR-H029953XX, bis-ANS, and 1-dodecyl sulfuric
acid) and one positively charged (XR5118) organochemical PAI-1
neutralizers have overlapping but not identical binding sites in a
hydrophobic area in the flexible joint region of PAI-1. Neutralization
proceeds through two steps as follows: first conversion to forms with
substrate behavior and second to inert forms. With the negatively
charged neutralizers, but not the positively charged one, the second
step was associated with PAI-1 polymerization.
Besides the five neutralizers studied in detail, a number of other
amphipathic organochemicals also neutralized PAI-1 (Fig. 2). Some of
the compounds, including 1-dodecyl sulfuric acid and deoxycholic acid,
are generally used as detergents. However, the neutralizing effect of
the five compounds studied in detail did not seem to depend on their
detergent properties. First, the critical micelle concentration for
1-dodecyl sulfuric acid is 8 mM (60, 61), much higher than
its 15 µM IC50 value for PAI-1
neutralization. Second, although structurally very different compounds
were able to neutralize PAI-1 with a relatively low IC50
value, a certain specificity was observed. For instance, among the two
carboxylic acids with unbranched aliphatic side chains, the length of
the side chain appeared to be decisive for activity (Fig. 2). Third, the observations that XR5118 inhibited the polymerization induced by
the negatively charged neutralizers (Fig. 9) are difficult to reconcile
with a detergent mechanism. Fourth, the well defined PAI-1 polymers
observed by native gel electrophoresis (Fig. 11) are in contrast to the
expectancies from a detergent-induced, nonspecific aggregation.
Rather, our findings point to the five neutralizers exerting their
effect by binding to overlapping sites in a hydrophobic area with a
relatively low binding specificity. This notion is supported by the
observation that all nonfluorescent neutralizers competed the binding
of ANS and bis-ANS (Fig. 5) and by the largely good agreement between
the IC50 values (Fig. 2) and the fluorimetrically determined dissociation constants (Table I). Likewise, our bis-ANS binding studies were compatible with a single class of binding sites
with respect to binding affinity. Although the binding studies led to
determination of the number of bis-ANS-binding sites per PAI-1 molecule
to a value between 1 and 2 and therefore did not exclude the existence
of two independent bis-ANS-binding sites, the induction of about 80%
polymerization of 6 µM PAI-1 by 5 µM bis-ANS (Fig. 8) is a strong argument for a single binding and effector
site for bis-ANS. Furthermore, the observed XR5118 inhibition of the
polymerization induced by the negatively charged neutralizers (Fig. 9)
is most readily explained by XR5118 and the negatively charged
neutralizers having overlapping binding sites. Thus, it seems most
likely that both the reversible and irreversible neutralizer effects
are caused by binding of one neutralizer molecule per PAI-1 molecule.
The possibility of several effector sites in PAI-1, each causing
neutralization by a specific mechanism, seems remote.
It was previously suggested that the flexible joint region of PAI-1
contains a regulatory, hydrophobic, ligand-binding area (50). The x-ray
crystal structures of active PAI-1 and
1PI are in
agreement with a hydrophobic cavity in this area (33, 34, 62, 63). Our
present findings are consistent with the hypothesis that the five
neutralizers bind in this cavity. First, amino acid substitutions in hD
and hE changed the IC50 values. Second, the stronger
binding of ANS and bis-ANS to active than to latent, reactive
center-cleaved and uPA-complexed PAI-1 is in agreement with the
expectancies from the x-ray crystal structures, showing that the
distance between s2A and hD and hE decreases upon insertion of RCL as
s4A (28, 32-34, 40). The volume of the hydrophobic cavity in active
PAI-1 was estimated to 676 Å3 (63). Each of the bulky and
and in most cases rigid neutralizer molecules would therefore be
expected to occupy a large fraction of the volume of the cavity. Thus,
the binding competition between the negatively and the positively
charged neutralizers is not in conflict with the observation that the
amino acid substitutions in hD and hE, respectively, affected the
IC50 values for the negatively and the positively charged
neutralizers differently. This observation is, in fact, in full
agreement with their different structures and the charge changes
associated with the substitutions. We therefore suggest that the
variation in neutralization kinetics, in the induced molecular changes,
and in the differential response to vitronectin is due to different
neutralizers occupying different subsites within the same hydrophobic
area. In this way, the different neutralizers may have different
effects on the conformation of
-sheet A and thereby different
effects on the movements of the RCL and the tendency to polymerization.
This situation is reminiscent of estrogen receptor binding of estrogen
agonists, antagonists, and partial agonists, which have overlapping
binding sites, but induce different conformational changes in the
receptor protein (64-66).
Induction of serpin polymerization by small organochemical ligands is a
novel finding. Previously described serpin polymerization all implicate
the RCL of one serpin molecule forming an additional strand in
-sheet A or
-sheet C of another molecule. There is evidence for
three different modes of loop-sheet polymerization. 1) Heating or
mutations in the so-called shutter region can lead to polymerization by
the RCL of one molecule inserting as s4A of another molecule (for
reviews see Refs. 2 and 17). 2) The RCL of one molecule can insert as
s1C in another molecule, in which the intrinsic s1C has been extracted
(67-69). 3) The RCL of one molecule can hydrogen-bond to s6A of
another molecule and thus form an s7A (33, 34). It is striking that the
fluorescence observed by addition of ANS and bis-ANS to active PAI-1
remained high after incubation under conditions leading to
polymerization, whereas the fluorescence induced by addition of these
compounds to latent, reactive center-cleaved and uPA-complexed PAI-1
was much lower. This observation argues against the polymerization involving insertion of the RCL as s4A and favors the other modes of
polymerization. The mode of the polymerization described here is
clearly different from the recently reported PAI-1 polymerization induced in both latent and active PAI-1 at the strongly acidic pH of 4 (70).
An important perspective is the possibility of utilizing the
hydrophobic area as a target for anti-cancer and anti-thrombotic drugs.
To do so, strategies must be developed to circumvent certain problems
that have become apparent from the studies described here. First, the
strong binding to serum albumin common to all the compounds studied
here must be avoided. Second, since PAI-1 is expected to be bound to
vitronectin in vivo, pharmacologically potentially
interesting molecules must have a high affinity not only to free PAI-1
but also to PAI-1 in its vitronectin-associated state. Third, other
serpins have similar hydrophobic areas, and the specificity of PAI-1
neutralizers of potential interest for in vivo use must
therefore be ensured.
 |
ACKNOWLEDGEMENTS |
We are grateful to Dr. T. Frandsen for the
gift of reagents; Dr. Kees W. Rodenburg for help in constructing PAI-1
mutants; Dr. R. J. Read for providing the coordinate file for
active PAI-1; Dr. Michael Ploug for valuable suggestions; Ida
Thøgersen and Dr. Jan Enghild for their help with native gel
electrophoresis; and Janne D. Krogh, Lissy Nielsen, and Tina B. Nielsen
for competent technical assistance.
 |
FOOTNOTES |
*
This work was supported by grants from the Danish Cancer
Society, the Danish Natural Science Research Council, the Novo-Nordisk Foundation, and the Danish Heart Foundation.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
These authors contributed equally to this study.
To whom correspondence should be addressed: Dept. of Molecular
and Structural Biology, Aarhus University, 10C Gustav Wied's Vej, 8000 Aarhus C, Denmark. Tel.: 4589425080; Fax: 4586123178; E-mail:
pa@mbio.aau.dk.
Published, JBC Papers in Press, January 25, 2001, DOI 10.1074/jbc.M009024200
 |
ABBREVIATIONS |
The abbreviations used are:
PAI-1, plasminogen
activator inhibitor-1;
ANS, 1-anilinonaphthalene-8-sulfonic acid;
1PI,
1-proteinase inhibitor;
bis-ANS, 4,4'-dianilino-1,1'-bisnaphthyl-5,5'-disulfonic acid;
BSA, bovine serum
albumin;
h,
-helix;
IC50, concentration giving 50%
inhibition;
max, fluorescence emission maximum
wavelength;
LMW-uPA, low molecular weight-uPA;
PBS, phosphate-buffered
saline;
s,
-strand;
tPA, tissue-type plasminogen activator;
uPA, urokinase-type plasminogen activator;
wt, wild type;
CHO, Chinese hamster ovary;
RCL, reactive center loop;
PAGE, polyacrylamide
gel electrophoresis.
 |
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