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J. Biol. Chem., Vol. 276, Issue 19, 15876-15880, May 11, 2001
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From the
Received for publication, December 27, 2000
The human RAD52 protein plays an important role
in the earliest stages of chromosomal double-strand break repair via
the homologous recombination pathway. Individual subunits of RAD52
self-associate into rings that can then form higher order complexes.
RAD52 binds to double-strand DNA ends, and recent studies suggest that
the higher order self-association of the rings promotes DNA
end-joining. Earlier studies defined the self-association domain of
RAD52 to a unique region in the N-terminal half of the protein. Here we show that there are in fact two experimentally separable
self-association domains in RAD52. The N-terminal self-association
domain mediates the assembly of monomers into rings, and the previously
unidentified domain in the C-terminal half of the protein mediates
higher order self-association of the rings.
The repair of double-strand breaks in chromosomal DNA is of
critical importance for the maintenance of genomic integrity. In
Saccharomyces cerevisiae, genes of the RAD52
epistasis group, RAD50, RAD51, RAD52,
RAD54, RAD55, RAD57, RAD59,
MRE11, and XRS2, were identified initially by the
sensitivity of mutants to ionizing radiation (1, 2). These genes have
been implicated in an array of recombination events including mitotic
and meiotic recombination as well as double-strand break repair.
RAD52 mutants show the most severe pleiotropic defects
suggesting a critical role for the protein in homologous recombination
and double-strand break repair (2). The importance of specific
protein-protein interactions in the catalysis of homologous
recombination is suggested by studies demonstrating specific
contacts and functional interactions between Rad52p and a number of
proteins involved in recombination including Rad51p (3-8), which
catalyzes homologous pairing and strand exchange, and replication
factor A (RPA)1 (8-10), a
heterotrimeric single-stranded DNA binding protein (11).
Studies of the equivalent human proteins have identified similar
interactions between the RAD52, RAD51, and replication protein A
proteins (12-17). Based on a series of protein-protein interaction assays (15, 16, 18) and DNA binding
studies2 (16), a domain map
of RAD52 was proposed by Park et al. (16) (see Fig.
1). The determinants of self-association
were proposed to exist exclusively within a region defined by residues
65-165, a result supported by recent studies of several isoforms of
RAD52 (19). Electron microscopy (EM) studies of Rad52p and RAD52 have revealed formation of ring-shaped structures (9-13 nm in diameter), as
well as higher order aggregates (9, 12, 20). Stasiak et al.
(21) performed image analyses of negatively stained electron micrographs and determined that the 10-nm RAD52 rings are composed of
seven subunits. Scanning transmission electron microscopy (STEM) analysis indicated a mean mass of 330 ± 59 kDa supporting a
heptameric ring-shaped RAD52 structure (21). Recent studies show that
RAD52 binds to double-stranded DNA ends as an aggregated complex (20). These end-binding complexes were amorphous in shape and ranged in size
from 15 to 60 nm. Within these complexes, RAD52 rings were observed
occasionally. Binding of RAD52 to the DNA ends promoted end-to-end
association between DNA molecules and stimulated ligation of both
cohesive and blunt DNA ends (20).
Therefore, given that the formation of both ring-shaped oligomers and
aggregates of these rings seem relevant to RAD52 function, we sought to
investigate further the self-association properties of the RAD52
protein. We performed a series of analyses comparing full-length
RAD52-(1-418) with two different mutant RAD52 proteins: (i) a 1-192
mutant that spans the N-terminal portion and includes the entire
proposed DNA binding and self-association domains and (ii) a 218-418
mutant that spans the C-terminal portion of RAD52 that includes the
proposed RPA- and RAD51-binding domains (Fig. 1). In contrast to
previous studies, our results show that there are experimentally
separable determinants for two different modes of self-association by
RAD52, one in the N-terminal and one in the C-terminal portion of the protein.
RAD52 Constructs--
Wild-type RAD52 and
RAD52-(1-192) pET28 expression plasmids were a gift from
Dr. M. Park and have six histidines fused to the C terminus. A pET28
expression plasmid containing the thioredoxin-RAD52-(218-418) fusion
protein was constructed using standard polymerase chain reaction techniques.
Protein Purification--
Cultures of transformed BL21(DE3)
Codon Plus Escherichia coli (Stratagene) were grown
in a fermentor and induced with 0.5 mM
isopropyl-1-thio- Enzyme-linked Immunosorbent Assay--
The enzyme-linked
immunosorbent assay was done at room temperature. Briefly, 10 pmol of
wild-type RAD52, RAD52 mutants, or BSA were coated to microtiter plates
for 1 h. Plates were washed three times with phosphate-buffered
saline (PBS) containing 0.02% Tween 20 to remove unbound protein.
Plates then were blocked with 5% milk in PBS for 10 min and then
washed. Various amounts of RPA in PBS and 5% milk were added and
incubated for 1 h. Plates then were washed to remove nonspecific
interactions and probed with a monoclonal antibody against the 70-kDa
subunit of RPA (Calbiochem) in PBS and 5% milk for 30 min. Plates then
were washed and probed with anti-mouse IgG peroxidase conjugate (Sigma)
in PBS and 5% milk for 30 min and washed. Plates were developed using
3,3',5,5'-tetramethylbenzidine in phosphate-citrate buffer with 0.03%
hydrogen peroxide. Color was developed for 30 min, the reaction was
stopped with 1.5 M H2SO4, and
absorbance readings at 450 nm were taken with a microtiter plate
reader. Background absorbance was determined from a blank well and then
subtracted from the data.
Gel-shift DNA Binding Assays--
Reactions (20 µl) contained
20 mM triethanolamine-HCl, pH 7.5, 1 mM
dithiothreitol, 1 mM MgCl2, 0.1 mg/ml BSA,
0.05% Tween 20, 2 nM 5'-end-labeled 95 base
oligonucleotide (concentration in bases), and the indicated amounts of
protein. The oligonucleotide sequence is as follows: 5'-AGA CGA TAG CGA
AGG CGT AGC AGA AAC TAA CGA AGA TTT TGG CGG TGG TCT GAA CGA CAT CTT TGA
GGC GCA GAA AAT CGA GTG GCA CTA ATA AG-3'. Reactions were incubated at
37 °C for 20 min followed by the addition of glutaraldehyde to 0.2% and continued incubation at 22 °C for 20 min. Glycerol was added to
a final concentration of 1.6% (w/v) and samples (10 µl) were loaded
onto a 0.8% agarose gel and electrophoresed at 100 mV in 0.5× TBE
buffer (90 mM Tris, 64.6 mM boric acid, and 2.5 mM EDTA, pH
8.3). Gels were analyzed using a Molecular Imager FX and
QuantityOne software (Bio-Rad). The 95-base oligonucleotide used in the
gel-shift assays was made using an ABI 392 DNA/RNA synthesizer.
Dynamic Light-scattering (DLS) Analysis--
DLS was carried out
using a DynaPro-801 molecular sizing instrument equipped with a
microsampler (Protein Solutions). A 50-µl sample was passed through a
filtering assembly into a 12-µl chamber quartz cuvette. For
RAD52-(1-192) and RAD52-(218-418), 20-nm filters were used. For
wild-type RAD52, a 100-nm filter was used. The data were analyzed first
using Dynamics 4.0 software and then DynaLS software as follows.
Hydrodynamic radii (RH) for monomodal
distributions, as defined by a baseline ranging from 0.977 to 1.002, were reported from Dynamics 4.0. Bi- and multimodal distributions were
analyzed using DynaLS. DynaLS data estimates of molecular weight were
obtained from RH using Dynamics 3.0 molecular weight
calculator. Sum of squares errors less than 5000 were considered negligible.
Electron Microscopy--
Proteins were prepared for EM by
diluting wild-type or mutant RAD52 to 4.0 µM in a buffer
containing 20 mM Tris-HCl, pH 7.5, 5% glycerol, 5 mM STEM Analysis--
Analyses were carried out at the Brookhaven
National Laboratory using unstained, unshadowed freeze-dried samples.
Protein samples (~0.1 mg/ml) were applied to a thin carbon film
supported by a thick holey film on titanium grids and freeze-dried
overnight. The microscope operates at 40 kV. Operation of the STEM and
data analyses were performed as described previously (23).
Gel Filtration--
Samples of the RAD52-(218-418) protein at
1.2 mg/ml were loaded onto a Superdex 200 HR 10/30 gel filtration
column (Amersham Pharmacia Biotech/LKB) equilibrated in buffer
containing 20 mM MES, pH 6.0, 400 mM
NaCl, 100 mM KCl, 10% (w/v) glycerol, 5 mM Oligomeric Characteristics of RAD52 Proteins--
EM analyses of
wild-type RAD52 and RAD52-(1-192) show that both proteins form
ring-shaped structures (Figs. 2 and 3).
The average diameter of these particles, measured across the
surface with the central pore, is 10 ± 1 nm, consistent with previous reports (9, 12, 21). Wild-type RAD52
also forms distinct larger particles that appear as various sized
spheres and half-spheres ranging in diameter from 30 to 100 nm (Fig.
2). These particles consist of individual 10-nm rings as well as other
less distinct compressed structures. For RAD52-(1-192) the majority of
protein forms ring-shaped oligomers, and no larger particles were seen (Fig. 3). Even at increased concentrations (6 and 10 µM)
RAD52-(1-192) shows no larger aggregates (data not shown). Higher
magnifications reveal "protrusions" extending from the 10-nm
rings formed by wild-type RAD52 that are missing in the 1-192 protein
(see arrows in Fig. 3, B and D). These
protrusions likely correspond to those modeled by Stasiak et
al. (21), and our data show that they are part of the C-terminal
portion of RAD52.
STEM analyses of wild-type RAD52 (2 µM) showed particle
sizes ranging from 175 to 625 kDa with a mass average of 298 ± 69 kDa (n = 309; Fig.
4A). Given a molecular mass of
48 kDa for the His-tagged RAD52 protein, this range corresponds
to particles that contain from 4 to 13 subunits with an average of six
subunits. Similar analyses of the 1-192 protein showed particle sizes
ranging from 100 to 350 kDa with a mass average of 227 ± 30 kDa
(n = 277; Fig. 4B). For a monomer molecular
mass of 23 kDa, this range corresponds to particles that contain from 4 to 15 subunits with an average of 10 subunits. Resolution of the
ring-shaped oligomers in the electron micrographs was not high enough
to count individual subunits, but our STEM data are consistent
with previous work in which oligomeric rings of wild-type RAD52 were
determined to be heptameric (21).
The oligomeric distribution of these proteins in solution was
investigated by DLS. Wild-type RAD52 shows a multimodal profile with
three peaks corresponding to particles with an average hydrodynamic radius of 6.6, 27.6, and 711.0 nm, respectively (Table
I). These likely correspond to
ring-shaped oligomers, the 30-nm particles described previously
as "super-rings" (12) and seen in our micrographs (Fig. 2), and
larger aggregates also observed in our micrographs. We find that the
percent distribution of these various sized particles is effected by
protein concentration, i.e. with increasing concentration the larger aggregates account for a larger percentage of the
population. In contrast to wild type, RAD52-(1-192) shows a monomodal
light-scattering profile that corresponds to a particle with a
hydrodynamic radius of 6.1 nm (Table I), which is in agreement with our
EM analysis.
The above analyses indicate at least two modes of RAD52
self-association that are experimentally separable, (i) formation of
ring-shaped oligomers and (ii) formation of larger aggregates. Because
the latter seems to depend largely on the presence of residues
C-terminal to position 192, we performed a number of assays to test for
self-association on a mutant RAD52 containing only residues 218-418.
Initial EM studies showed no distinct structural characteristics for
this protein (data not shown), but STEM analysis revealed particle
sizes ranging from 75 to 275 kDa (Fig. 4C) with a mass
average of 153 ± 40 kDa (n = 119; Fig.
4C). Given a monomer molecular mass of 39 kDa, the particle
composition ranges from two to seven subunits with an average of four
subunits. Gel filtration shows a homogeneous peak corresponding to a
molecular mass of 166 kDa (Fig. 5) and
therefore to a particle containing approximately four subunits.
Analysis by DLS shows a monomodal peak corresponding to a particle with
an average RH of 4.6 nm and a molecular mass of 118 kDa (therefore containing approximately three subunits). DLS
measurements on thioredoxin alone show that it does not contribute to
the oligomeric character of thioredoxin-RAD52-(218-418) (Table I).
Together, these data indicate that the C-terminal portion of RAD52
(residues 218-418) contains determinants of protein self-association that are distinct from those required to form 10-nm rings.
DNA Binding--
Binding of wild-type RAD52 and RAD52-(1-192) to
single-stranded DNA was analyzed by gel-shift assays. The gels in Fig.
6 are representative of five different
experiments, each of which gave similar results. In each case, analysis
of unbound and bound DNA (including that in the gel well) gave rise to
a KD(app) of 35 and 25 nM
for wild-type RAD52 and RAD52-(1-192), respectively. This slight
enhancement in binding affinity was observed consistently for
RAD52-(1-192). With wild-type RAD52 a significant portion of bound DNA
remained in the gel well, a result that likely reflects the ability of
the wild-type protein to form greater amounts of self-aggregates than
the 1-192 mutant protein (see below). Additionally, 100% of the DNA
(2 nM total nucleotides) was bound by the 1-192 protein at
40-60 nM protein in the titration profile, whereas 100%
binding by wild-type RAD52 consistently required greater than 100 nM protein. Assays using the RAD52-(218-418) mutant
protein showed no DNA binding up to 2.0 µM protein (data
not shown). These results show that the DNA binding domain of RAD52 is
contained within the N-terminal portion of the protein and that removal of the C-terminal 227 residues results in a slight enhancement of DNA
binding.
Interaction of RAD52 Proteins with RPA--
Previous studies have
mapped residues 221-280 as the domain in RAD52 that interacts with the
32-kDa subunit of RPA (16). To ensure that the 218-418 mutant
construct maintained a native fold, we tested this protein for
interaction with RPA using an immunoassay. Enzyme-linked immunosorbent
assays showed that the 218-418 protein interacted with RPA with
an affinity similar to that observed for wild-type RAD52 (Fig.
7). No interaction with RPA was observed
for RAD52-(1-192), thioredoxin, or BSA.
Previous studies have shown that RAD52 exists in a number of
oligomeric states ranging from rings with a 10-nm diameter to larger
complexes with diameters of greater than 30 nm (9, 12, 20, 21). Recent
observations indicate a direct role for these higher order
protein-protein interactions in promoting DNA end-joining (20). We
therefore sought to investigate the self-association properties of
RAD52 utilizing an array of biophysical techniques.
In our EM studies of wild-type RAD52 and RAD52-(1-192), we
observed ring structures with an average diameter of 10 ± 1 nm as
has been reported previously (9, 12, 20, 21). Additionally, and as seen
previously (12, 20, 21), we observed protrusions extending from
wild-type RAD52 rings as well as a population of distinct larger
particles. However, neither the protrusions nor the larger particles
were observed with RAD52-(1-192). This suggests that residues within
the C-terminal portion of the protein (residues 193-418) make up these
protrusions and carry determinants for higher order RAD52
self-association.
DLS analysis of wild-type RAD52 and the two mutant proteins provides
additional and complementary evidence for two distinct modes of RAD52
self-association. DLS analysis of wild-type RAD52 shows three peaks
that likely correspond to the 10-nm ring-shaped oligomers and the 30-nm
and larger particles observed by EM. In contrast, both
RAD52-(1-192) and RAD52-(218-418) show a monomodal DLS profile
indicating the presence of a single population of structures. The
RAD52-(1-192) RH is consistent with a ring
structure, and the RAD52-(218-418) RH indicates a
complex composed of three subunits. This self-association of RAD52-(218-418) was confirmed by size-exclusion chromatography and
STEM.
The ability of RAD52-(218-418) to self-associate was unexpected.
Previous studies have suggested that residues 65-165 define the
exclusive self-association domain in the RAD52 protein (18). Shen
et al. (18) found that although N-terminal fragments of the
protein self-associated in two-hybrid screens and affinity chromatography assays, fragments containing various portions of the C
terminus, e.g. 287-418 or 166-418, did not. In contrast to
these results, we find that RAD52-(218-418) is able to self-associate. Although our EM analysis revealed no distinct oligomeric structures for
RAD52-(218-418), three different methods (STEM, gel filtration, and
DLS) showed that this mutant formed oligomeric particles containing 3-4 subunits. These data for RAD52-(218-418), coupled with the inability of RAD52-(1-192) to form structures larger than the 10-nm
rings, indicate that residues within the C-terminal region of the
protein make important contributions to RAD52 self-association. Thus,
the C-terminal region of RAD52 contains a novel self-association domain
distinct from that previously identified within residues 65-165
(18).
Importantly, functional analyses of both the 1-192 and 218-418 mutant
proteins show that each maintains an expected activity. Both wild-type
RAD52 and the 1-192 proteins, which form ring-shaped oligomers, bound
single-stranded DNA with similar affinities. This is consistent with
previous studies that mapped the DNA binding domain of RAD52 to
residues 39-802 (16). The
elevated affinity of RAD52-(1-192) for single-stranded DNA was noted
also for a similar Rad52p construct (24). Also as expected,
RAD52-(218-418) showed a specific interaction with RPA. Again, this is
consistent with previous studies that mapped the RPA interaction domain
to residues 221-280 in RAD52 (16). The fact that both mutant proteins
showed the expected functions demonstrates that they very likely
maintain native structure, thereby supporting the relevance of
differences observed in their oligomeric characteristics compared with
wild-type RAD52.
In summary, our data support a model in which the self-association
domain within the N-terminal region of RAD52 (residues 1-192) promotes
the formation of ring-shaped oligomers that are functional for DNA
binding, whereas the C-terminal domain (residues 218-418) mediates
higher order self-association events. Additionally, the protrusions
extending from the 10-nm ring structure of wild-type RAD52, originally
modeled by Stasiak et al. (21) and seen clearly in our
electron micrographs, correspond to the C-terminal region of the
protein. Given the likely importance of higher order self-association to the ability of RAD52 to promote end-to-end joining of DNA breaks (20), these protrusions seem to mediate a critically important aspect
of RAD52 function. Further studies of various mutant RAD52 proteins
will clarify the contribution made by the different aspects of
self-association toward the overall function of this important DNA
repair protein.
We thank Matt Pokross and Jeff Habel for
technical assistance and Krishnamurthy Rajeswari and Cathy Schellert
for help in the early stages of this project. We also thank Dr. Min
Park at Los Alamos National Laboratory for wild-type RAD52
and RAD52-(1-192) expression plasmids. We gratefully
acknowledge Dr. Martha Simon at Brookhaven National Laboratory for
performing the STEM analyses.
*
This work was supported by the United States Army Medical
Research and Material Command under DAMD17-98-1-8251 (to
G. E. O. B.) and National Institutes of Health Grant GM44772 (to
K. L. K.). Brookhaven National Laboratory STEM is supported by
National Institutes of Health Grant P41-RR01777 and partially supported by the Department of Energy and Office of Biological and Environmental Research.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
These authors contributed equally to this work.
Published, JBC Papers in Press, February 13, 2001, DOI 10.1074/jbc.M011747200
2
J. A. Lloyd, and K. L. Knight,
unpublished data.
The abbreviations used are:
RPA, replication protein A;
MES, 4-morpholineethanesulfonic acid;
EM, electron microscopy;
STEM, scanning transmission electron microscopy;
BSA, bovine serum albumin;
DLS, dynamic light scattering.
Human RAD52 Exhibits Two Modes of Self-association*
§,
§,
Department of Chemistry, University of
Toledo, Toledo, Ohio 43606-3390 and the ¶ Department of
Biochemistry and Molecular Pharmacology, University of Massachusetts
Medical School, Worcester, Massachusetts 01655-0103
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

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Fig. 1.
Schematic diagram of wild-type RAD52
and deletion mutants. The beginning and ending residue numbers of
each mutant are indicated along with domain structure. The following
domains and residue numbers were defined by Park et al.
(16): DNA binding, 39-80; self-association, 85-159; RPA binding,
221-280; RAD51 binding, 290-330.
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EXPERIMENTAL PROCEDURES
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-D-galactopyranoside. Wild-type
RAD52 and RAD52-(1-192) cells were resuspended
in a buffer consisting of 20 mM HEPES, pH 6.0, 10%
glycerol, 400 mM NaCl, 100 mM KCl, 5 mM
-mercaptoethanol, 1 mM dithiothreitol, 1 mM hexylglucopyranoside, and 1 mM EDTA.
RAD52-(218-418) cells were resuspended in a buffer consisting of 50 mM HEPES, pH 8, 500 mM KCl,
500 mM LiSO4, 2.5% glycerol, 1 mM
EDTA, 5 mM dithiothreitol, 4 mM imidazole, and 0.1% Triton X-100. Protease inhibitors (1 mM
phenylmethylsulfonyl fluoride and 10 mM benzamidine) were
used throughout purification. Cells were lysed using a French press,
and the lysate was clarified by centrifugation, filtration through Cell
Debris Remover-modified cellulose (Whatman), and passage through a
0.22-µm pore filter. The clarified lysate was applied to an
MC/M Ni2+ affinity column (PerSeptive Biosystems)
that was optimally washed and eluted with an imidazole gradient.
Wild-type RAD52 and RAD52-(1-192) then were dialyzed extensively
against a buffer consisting of 20 mM MES, pH 6.0, 10%
glycerol, 400 mM NaCl, 100 mM KCl, 5 mM
-mercaptoethanol, 1 mM dithiothreitol, 1 mM hexylglucopyranoside, and 1 mM EDTA.
RAD52-(218-418) was dialyzed extensively against a buffer consisting
of 50 mM HEPES, pH 8.0, 2.5% glycerol, 2.5 mM
EDTA, and 0.5 mM hexylglucopyranoside and then purified
further by anion exchange using an HQ/M column (PerSeptive
Biosystems) eluted with a KCl gradient. Protein samples were
concentrated using Amicon concentrators with YM10 membranes, and
protein concentrations were determined using Bradford assay (Bio-Rad)
with bovine serum albumin (BSA) as a standard. The expression plasmid
for wild-type RPA heterotrimer was a gift from Dr. M. Wold. RPA was
expressed and purified as described (22).
-mercaptoethanol, 0.1 mM EDTA, and 100 mM KCl. Samples were spread onto thin carbon films on holey
carbon grids (400 mesh), stained with 1% uranyl acetate, and
visualized by transmission electron microscopy using a Philips CM10 microscope.
-mercaptoethanol, and 1 mM EDTA. Analysis was performed
using a BioLogic chromatography system (Bio-Rad) with an in-line UV detector.
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RESULTS
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
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Fig. 2.
Negative stained electron micrograph of
wild-type RAD52. Wild-type RAD52 (4.0 µM) was
prepared as described under "Experimental Procedures." Larger
spherical particles are ~80 nm in diameter, half-spheres are 50 nm,
and numerous 10-nm rings are visible also. Black bar = 0.1 µm.

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Fig. 3.
Negative stained electron micrographs of
wild-type RAD52 and RAD52-(1-192) protein. Proteins (4.0 µM) were prepared as described under "Experimental
Procedures." The majority of protein for both wild-type RAD52
(A and B) and RAD52-(1-192) (C and
D) forms 10-nm diameter ring-shaped oligomers. Larger
particles of wild-type RAD52 in A (also see Fig. 2) are not
formed by RAD52-(1-192). Higher magnifications of both proteins reveal
that the protrusions observed on the 10-nm rings of wild-type RAD52 are
missing in the RAD52-(1-192) rings (arrows in B
and D). Black bars = 0.05 µm in
A and C and 0.01 µm in B and
D.

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Fig. 4.
STEM histograms. STEM mass
analyses were performed as described under "Experimental
Procedures." Histograms include pooled data from several separate
analyses (eight for wild-type RAD52, six for RAD52-(1-192), and five
for RAD52-(218-418)). Average mass values were as follows:
A, wild-type RAD52 298 ± 69 kDa (n = 309); B, RAD52-(1-192) 227 ± 30 kDa
(n = 277); C, RAD52-(218-418) 153 ± 40 kDa (n = 119).
Dynamic light-scattering measurements of RAD52 proteins

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Fig. 5.
Gel filtration profile of the
thioredoxin/218-418 fusion RAD52 protein. The mutant protein (1.2 mg/ml, 35.8 µM) was loaded onto a Superdex 200 HR 10/30
gel filtration column, and elution of protein was followed at
A280 nm. The indicated elution volumes of
standards (ferritin, 440 kDa; catalase, 232 kDa;
BSA, 68 kDa; ovalbumin, 44 kDa) were an average
of four runs.

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Fig. 6.
Gel-shift DNA Binding assays. Indicated
concentrations of either wild-type RAD52 or RAD52-(1-192) were
incubated with a 5'-end-labeled 95-base oligonucleotide followed by
cross-linking with glutaraldehyde as described under "Experimental
Procedures." Reactions were electrophoresed on a 0.8% agarose gel.
Radioactive material at the top of the gel represents
protein-DNA complex trapped in the gel well. u, unbound DNA;
b, protein-DNA complex.

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Fig. 7.
RAD52-RPA protein-protein interactions.
Enzyme-linked immunosorbent assays were performed as described under
"Experimental Procedures" with RAD52 proteins immobilized to
microtiter plates and probed with increasing amounts of RPA
heterotrimer. The experiment was performed in triplicate, and the
average for each RPA concentration was plotted. The error was on the
order of 5-10%. wt, wild type.
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DISCUSSION
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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ACKNOWLEDGEMENTS
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FOOTNOTES
To whom correspondence should be addressed: Dept. of
Chemistry, University of Toledo, 2801 W. Bancroft St., Toledo, OH
43606-3390. Tel.: 419-530-1501; Fax: 419-530-4033; E-mail:
gborgst@uoft02.utoledo.edu.
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ABBREVIATIONS
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REFERENCES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
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