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Originally published In Press as doi:10.1074/jbc.M103285200 on June 19, 2001

J. Biol. Chem., Vol. 276, Issue 34, 32274-32281, August 24, 2001
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The Crystal Structure of Tetanus Toxin Hc Fragment Complexed with a Synthetic GT1b Analogue Suggests Cross-linking between Ganglioside Receptors and the Toxin*

Constantina FotinouDagger , Paul EmsleyDagger , Isobel BlackDagger , Hiromune Ando§, Hideharu Ishida§, Makoto Kiso§, Katharine A. Sinha, Neil F. Fairweather, and Neil W. IsaacsDagger ||

From the Dagger  Department of Chemistry, University of Glasgow, Glasgow, G12 8QQ, Scotland, the § Department of Applied Bio-organic Chemistry, Gifu University, Gifu 501-1193, Japan, and the  Department of Biochemistry, Imperial College of Science and Technology Medicine, London SW7 2AZ, United Kingdom

Received for publication, April 12, 2001, and in revised form, June 11, 2001

    ABSTRACT
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES

Tetanus toxin, a member of the family of Clostridial neurotoxins, is one of the most potent toxins known. The crystal structure of the complex of the COOH-terminal fragment of the heavy chain with an analogue of its ganglioside receptor, GT1b, provides the first direct identification and characterization of the ganglioside-binding sites. The ganglioside induces cross-linking by binding to two distinct sites on the Hc molecule. The structure sheds new light on the binding of Clostridial neurotoxins to receptors on neuronal cells and provides important information relevant to the design of anti-tetanus and anti-botulism therapeutic agents.

    INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES

Tetanus toxin (TeNT)1 and the botulinum toxins (BoNTs) are extremely potent neurotoxins produced by the anaerobic bacteria, Clostridium tetani and Clostridium botulinum, respectively. The toxins are structurally and functionally related, each being synthesized as a 150-kDa single polypeptide that is subsequently proteolytically cleaved to give a 50-kDa amino-terminal L-chain, disulfide bonded to a 100-kDa carboxyl-terminal H-chain (1, 2). The L-chain has a metalloprotease activity and is responsible for the toxicity (3). The heavy chain can be cleaved into two fragments, HN and HC. Each fragment is thought to have a distinct function, the HC fragment for binding to sensitive cells and subsequent internalization into vesicles (4-6), and the HN fragment for the translocation of the L-chain across the vesicular membrane (4, 7). Although tetanus and botulinum toxins bind at the nerve terminals of the neuromuscular motor junction they exhibit different clinical symptoms. BoNTs act locally at the peripheral nervous system by disrupting neurotransmitter release and causing flaccid paralysis. In contrast, TeNT activity occurs at the central nervous system, following retrograde transport from the axon terminal to inhibitory neurons within the spinal cord. Proteolytic cleavage of vesicle-associated membrane protein by TeNT L-chain blocks neurotransmitter release (3), by preventing formation of the synaptic SNARE complex (8).

A two-receptor model incorporating ganglioside and protein receptors has been proposed to explain the distinct sites of action of TeNT and BoNTs (5, 9, 10). These models attempt to explain the experimental observations that are largely inconsistent with a sole ganglioside receptor, such as the difference in the binding affinity measured in vivo (10-12 M) and in vitro (10-6 to 10-8 M) (5, 11, 12) and the low and high affinity sites that have been measured in rat brain membranes (13, 14). Although synaptotagmin in combination with gangliosides has been shown to act as a receptor for BoNT/A, -B, and -E (15-17) characterization of the protein receptors for other toxins is extremely limited. A putative receptor for TeNT has been described, but the protein(s) remain to be characterized at the molecular level (9, 10).

Ganglioside molecules are a class of glycosphingolipids found in high percentages in the membranes of neuronal cells (18). Most of them contain a common "core" (GM1 ganglioside) consisting of Gal(beta 1-3)GalNAc(beta 1-4)(NeuAc(alpha 2-3))Gal(beta 1-4)Glc(beta 1-1)Cer to which one or more N-acetylneuraminic acids (sialic acids) are bound (18) (Fig. 1a). They were the first membrane components found to have BoNT and TeNT binding activity (19-21). Later studies have identified the gangliosides of series b, especially GT1b (Fig. 1a) and GD1b, to have the highest affinity (11, 22-26). Binding studies of TeNT to brain membranes and purified gangliosides have shown that the Gal(beta 1-3)GalNAc(beta 1-4)(NeuAc(alpha 2-8)NeuAc(alpha 2-3))Gal(beta 1-4) moiety (i.e. Gal4-GalNAc3-Sia7-Sia6-Gal2 in Fig. 1a) is essential for the binding of TeNT or HC fragment (22, 23).


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Fig. 1.   Schematic representations of a, GT1b ganglioside. The monosaccharide subunit labels used in this paper are shown. GD1b lacks Sia5. The shaded area corresponds to the GM1 ganglioside and the boxed outline encloses the portion of GT1b essential for binding TeNT. b, the oligosaccharide of the synthetic GT1b ganglioside analogue (GT1b-beta A) used in this study. Sia6 is the beta -anomer. The ceramide of the cellular GT1b has been replaced by CH2CH2Si(Me)3 to increase solubility.

The x-ray crystal structure of the HC fragment (27, 28) shows that the protein has two domains. The amino-terminal domain has a jelly-roll lectin-like fold and the carboxyl-terminal is a beta -trefoil. The COOH-terminal domain of the heavy chain of BoNT/A (29) has been shown to have a similar structure. Biochemical and mutational studies (4, 6, 30) with TeNT and native and recombinant HC fragments have shown that the beta -trefoil domain of the HC fragment contains the ganglioside and cell-binding site(s). Photoaffinity labeling studies have implicated the area near residue His1293 as a site where ganglioside binds (31). Our own studies on the crystal structure of TeNT HC complexed with lactose (Gal(beta 1-4)Glc) supports this association (28). Further structural studies on HC crystals soaked in solutions containing the carbohydrate units of gangliosides (galactose, N-acetylgalactosamine and sialic acid) (28), identified three more areas where the monomer sugar units bound. These results suggested that additional sites on the HC molecule may be involved in recognition of ganglioside receptors and that a single ganglioside could bind simultaneously to more than one TeNT molecule. Our attempts to crystallize a complex between TeNT HC and native GT1b ganglioside have not been successful. However, crystals could be grown of a complex formed between TeNT HC and a synthetic GT1b analogue. This analogue has the ceramide replaced by a 2-(trimethylsilyl)ethyl group and a beta 2-3 linkage from the disialic acid arm to the central galactose unit, i.e. Sia6 is the beta -anomer (Fig. 1b). The crystal structure of this complex shows cross-linking between the GT1b analogue and TeNT HC.

    MATERIALS AND METHODS
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES

Ganglioside Synthesis-- The fully protected derivative of GT1b oligosaccharide (290 mg), compound 27 in Ishida et al. (32), was converted into the desired product (87 mg, 53% in three steps) by hydrogenolytic removal of benzyl groups over Pd-C catalyst, de-O-acylation with sodium methoxide in methanol and subsequent saponification of methyl esters and lactone group by treatment with 0.2 M KOH. The product was purified using a Sephadex LH-20 (MeOH) column.

Protein Expression and Purification-- TeNT HC protein was prepared from Escherichia coli BL21 (pKS1) by induction with isopropyl-1-thio-beta -D-galactopyranoside to 1 mM for 4 h as described by Sinha et al. (33). Cells were then harvested, lysed by sonication, and the HC protein purified by nickel affinity chromatography using Ni-NTA resin (Qiagen, Crawley, Sussex, United Kingdom) followed by gel-filtration on a Superdex-200 column. The protein was concentrated to 2.8 mg/ml using a 30,000 cutoff MicrocepTM microconcentrator (Pal Gelman Sciences) pretreated overnight with 10% glycerol to prevent nonspecific interactions of protein with the membrane.

Crystallization-- Protein (2.8 mg/ml) and the GT1b analogue (GT1b-beta A) were mixed in a range of final molar ratios (1:2 to1:10). Crystals were produced from all mixtures by vapor diffusion against a 1-ml reservoir solution containing either 20% PEG 4K and 0.2 M imidazole-malate (pH 7.0), or 20% PEG 8K, 0.2 M Na2KPO4, and 0.1 M TRIS (pH 8.5) using a sitting drop containing 2 µl of the HC + heptasaccharide solution and 2 µl of reservoir solution.

After a few days, plate-like crystals (thickness less than 10 µm) grew in the first conditions and rod-like crystals (thickness about 50 µm) in the second conditions. X-ray diffraction data from the plate-like crystals were collected at the ESRF microfocus beamline (ID13, lambda  = 0.782 Å) with a Mar CCD detector set at a distance of 170 mm from the crystal. With an initial exposure time of 5 s per frame, 40 frames were collected from a single crystal with intervals of 1° of rotation about an axis perpendicular to the x-ray beam. The crystal was then translated 4 times to reduce the effects of damage caused by the intense beam. Following the first translation 50 frames were collected with 5-s exposures; then 23 frames with 20-s exposures; then 20 frames with 10-s exposures and finally 40 frames, with 10-s exposures. Each frame covered 1° rotation of the crystal. Data from the rod-like crystal were collected at the Daresbury SRS, station 7.2 (lambda  = 1.488 Å) with a Mar240 image plate detector set at a distance of 173 mm from the crystal. An exposure at a 10,000 dose/frame and angular interval of 1° was used. 173 frames were collected from a single crystal. All data sets were collected under cryo-cooling conditions (100 K). The crystals were placed briefly in a well of cryo-protectant (15% PEG 400) then collected in a loop and flash-cooled in a stream of dry nitrogen at 100 K. Both crystal forms were monoclinic, space group P21, but the a cell dimension was doubled in the plate-like crystals, which contain two molecules in the asymmetric unit as a consequence. Table I shows the data statistics.

Crystal Structure Determination-- For both crystal forms, molecular replacement was performed using AMoRe (34) with the HC coordinates of the lactose-HC complex (PDB access code 1dll) (28) as the search model. After rigid body refinement of the protein (both crystal forms), several cycles of refinement using Refmac (35) and rebuilding with QUANTA, the carbohydrate ligand was modeled into weighted difference electron density (2mFo-DFc and mFo-DFc) maps (Fig. 2). Omit maps were used for building ambiguous areas. The initial model and the restraints dictionary for the carbohydrate were generated using coordinates for the monosaccharide units of the ligand taken from the Cambridge Structural Data base (CSD) and the Protein Data Bank. beta -Neuraminic acid (CSD code ANEU) was used for the beta -anomeric sialic acid, N-acetyl-beta -galactosamine (CSD code AOGAPY) for N-acetylgalactosamine, beta -lactose (CSD code BLACTO) for galactose and glucose, and coordinates for alpha -anomeric sialic acid were taken from the structure of the complex of cholera toxin with GM1 ganglioside (Protein Data Bank ID 2chb (36)).


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Fig. 2.   Stereo view of a weighted (mFo-DFc, calculated by Refmac (35)) difference electron density map of the GT1b-beta A contoured at 2sigma , calculated before building the ganglioside model. The clear density allows the unambiguous location of all the subunits GT1b. The refined GT1b-beta A coordinates are shown with the disordered terminal 2-(trimethylsilyl)ethyl group.

Further rebuilding and refinement proceeded using QUANTA, Refmac (35), and ARP (37). The protein structure geometry was analyzed using PROCHECK (38). Buried surfaces were calculated using GRASP (39) with a 1.4-Å probe radius.

The initial three-dimensional model of GT1b-OS was constructed with the SWEET software (40) and superimposed on the GT1b-beta A structure using LSQKAB (41). The fit was improved with cycles of manual adjustment to the glycosidic torsion angles of the GT1b-OS (QUANTA) followed by superposition with LSQKAB. Excluding Sia6, the r.m.s. difference between the overlapped oligosaccharides is 1.3 Å. No energy minimization was performed. The figures were prepared using SETOR (42) and GRASP (39) and were edited and composed using the GIMP (www.gimp.org/).

    RESULTS
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES

The complex of HC + GT1b-beta A crystallizes in two forms: one with two molecules in the asymmetric unit and the other with one. The final models of the two crystal forms of HC consist of residues 865 to 1315 of TeNT and all the carbohydrate residues. The terminal 2-(trimethylsilyl)ethyl group is disordered in all copies of the ganglioside and is modeled with two conformations. The model in the larger cell has 240 waters and in the smaller cell 120 (Table I). For both forms 80% of the residues are in the most favored regions of the Ramachadran plot as defined by PROCHECK (38) and no residues are in the disallowed regions.

                              
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Table I
Data statistics and refinement
Data were processed using Mosflm (53) and Scala (54).

The r.m.s. differences in the Calpha atom positions of the three copies of the protein (excluding flexible loop residues 865-875, 937-945, 977-989, 1060-1070, 1177-1194, and 1201-1209), are 0.57, 0.62, and 0.60 Å for the pairs A and B, A and C, and B and C, respectively (Fig. 3). The three independent copies of the protein in the two crystal forms provide the same general information on the HC-carbohydrate interactions. All have two binding sites on the HC molecule. One interacts with the Gal4-GalNAc3 and the other with Sia7-Sia6 moieties of different ganglioside molecules (Table II), so that the ganglioside acts as a cross-linker for the protein (Figs. 4 and 5).


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Fig. 3.   An overlap of three copies of the TeNT HC structure. The largest structural differences are in the loops.

                              
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Table II
Potential hydrogen bonds in the binding sites of Hc
We consider distances between donor-acceptor smaller or equal to 3.5 Å as potential hydrogen bonds, although we list in parentheses the distances larger than 3.5 Å.


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Fig. 4.   The cross-linking interaction of the ganglioside with the protein is illustrated with molecules from adjacent unit cells in the P21 crystal with one molecule per asymmetric unit. Molecule A is related to C by the 21 screw axis, whose direction is horizontal in this diagram. Molecules D and B are derived from A and C by unit cell translations. The domains of the HC and its NH2 terminus are labeled.


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Fig. 5.   Stereo view of the surfaces of the two binding sites of HC with the interacting ganglioside. The Gal4-GalNAc3 site is a deep cleft on one HC (red) and the Sia7-Sia6 a shallow groove on the other (blue). The protein residues forming the binding sites are shown.

Gal4-GalNAc3-binding Site-- The Gal-GalNAc-binding site is a narrow groove formed by the side chains of residues Trp1289 and His1271 with Tyr1290 forming the base (Fig. 6a). On one side of the groove, Trp1289 packs against His1293, while on the other His1271 packs against Phe1218. A hydrogen bond (3.5 Å in molecule A; 3.4 Å in molecule B; 3.5 Å in molecule C) from His1293 ND1 to the main chain carbonyl of Trp1289 contributes in holding the Trp in position. Tyr1290 forms only hydrophobic contacts. The location of His1293 is in agreement with photoaffinity labeling studies that place it close to a GD1b-binding site (31). This is also the site where lactose binds to HC (28). The Gal4-GalNAc3 units of the oligosaccharide interact extensively with this site. The hydrophobic faces of both sugar rings are stacked against the indole ring of Trp1289 and the polar faces are hydrogen bonded to the protein (Table II). There are some differences in the number of hydrogen bonds found in the three copies of the complexes (Table II) but because of the resolution of the structures the significance of these differences is uncertain. Common hydrogen bonds are formed between the side chain of His1271 and OH-6, OH-4 and O-5 of Gal4 and between the main chain carbonyl oxygen of Thr1270 and OH-4 of Gal4. GalNAc3 interacts via a hydrogen bond between OH-4 and Asp1222 OD and between OH-4 and His1271. The stacking of the hydrophobic face of galactose against aromatic rings and the involvement of OH-4 in specificity determination are common characteristics in carbohydrate-protein interactions (43, 44). There are also water-mediated hydrogen bonds that are not common in all copies. The buried surface area between protein and carbohydrate for the Gal4-GalNAc3-binding site is 694, 740, and 700 Å2 for copies A, B, and C, respectively.


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Fig. 6.   Stereo view of the ganglioside-protein binding sites. a, the Gal4-GalNAc3 site is a groove formed by Trp1289, His1271, and Tyr1290. The hydrophobic face of Gal4 packs against the indole ring of Trp1289. This packing is extended through His1293, Phe1218, and His1271. Hydrogen bonds are shown as dotted lines. b, the Sia7-Sia6 site consists of residues Asp1147, Arg1226, Asn1216, Asp1214, and Tyr1229. The disialo group binds to the protein through hydrogen bonds that are shown as dotted lines.

Sia7-Sia6-binding Site-- This binding site is a shallow pocket, involving residues Arg1226, Asn1216, Asp1214, Asp1147, and Tyr1229 in interactions with the disialic acid moiety (Fig. 6b). The shape of the binding site and the mode of sialic acid-protein interactions corresponds to the second class described by Stehle and Harrison (45) (one side of the sialic acid ring is in contact with the protein, O-4 is exposed and the glycerol group interacts with the protein). Again, there are differences in the number of H-bonds found in the copies of the complexes (Table II). Common interactions are the hydrogen bonds between OD-1 and OD-2 of Asp1147 and O-4 and the acetamido-N-5 of Sia6 and between ND-2 of Asn1216 and O-10 of Sia6. The terminal Sia7 interacts more than Sia6 with the protein. The interactions of Sia7 observed in all molecules are a salt bridge between Arg1226 and the sialic acid carboxylate group and hydrogen bonds between O-1A and the amide NH of Asn1216; between O-4 and the carbonyl oxygen of Asp1214; and between OH-8 and Tyr1229 hydroxyl group. These interactions of the sialic acid carboxylate and glycerol groups with the protein have been found to be specificity determinants in lectins (43, 44). The buried surface area between protein and carbohydrate for the Sia6-Sia7-binding site is 920, 956, and 903 Å2 for copies A, B, and C, respectively.

Carbohydrate Conformation-- The phi  and psi  angles of the glycosidic bonds of the oligosaccharide molecule are listed in Table III. The Gal4(beta 1-3)GalNAc3 and GalNAc3(beta 1-4)Gal2 glycosidic bonds, given the resolution of the structure, appear to be relatively flexible, as observed in the NMR structure of the similar GD1b ganglioside (46). The values of the Sia5(alpha 2-3)Gal4, and Sia7(alpha 2-8)Sia6 angles lie in minima predicted by theoretical calculations (47). There are intra-carbohydrate hydrogen bonds (Table II) and water mediated ones, but as they are not present in all copies, we believe they are not critical in determining the conformation of GT1b-beta A.

                              
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Table III
GT1b-beta A glycosidic bond angles
Torsion angles are defined as for NMR studies (46) of carbohydrates, e.g. phi  for the (beta 1-3) and (beta 1-4) sugar linkage is the dihedral angle defined by H1-C1-O-CX (X = 3,4), and psi  by C1-O-CX-HX (X = 3, 4); phi  for the (alpha 2-3) or (alpha 2-8) linkage is defined by C1-C2-O-CX (X = 3,8). Copy C of the ganglioside is from the crystal form with one molecule per asymmetric unit.

Comparison with the HC-Lac, NGA, and Sia Soaks-- We have compared the HC-GT1b-beta A structure with our previously reported structures of HC complexed with carbohydrates (28). The overlays used Calpha atoms within spheres of radius 10 Å around the binding site of the lactose complex and 12 Å for the N-acetylgalactosamine and sialic acid complexed structures. The r.m.s. deviations ranged from 0.29 to 0.35 Å for the lactose complex (0.29, 0.30, and 0.35 for molecules A, B, and C, respectively), 0.35-0.5 Å for the N-acetylgalactosamine complex (0.37, 0.35, and 0.50 for molecules A, B, and C, respectively) and 0.37-0.51 Å for sialic acid complex (0.37, 0.37, and 0.51 for molecules A, B, and C, respectively). The main difference between the HC-GT1b-beta A and N-acetylgalactosamine and sialic acid complex structures is the conformation of Asn1220 which has moved about 1.0 Å in order to leave space for Glc1 of the ganglioside. The galactose sugar of the lactose complex packs against Trp1289 and forms similar hydrogen bonds as Gal4 of GT1b-beta A although His1271 is moved by about 0.4 Å in the lactose complex structure leading to a loss of the hydrogen bond observed between Gal4 and ND1His1271 in the HC -GT1b-beta A complex.

The binding of N-acetylgalactosamine mimics that of Sia6. Hydrogen bonds are formed to Arg1226 via a water molecule while a SO<UP><SUB>4</SUB><SUP>2−</SUP></UP> anion occupies the position of the carboxylate group of Sia7 and mimics its ionic interactions. Surprisingly, the sialic acid of the soak structure is positioned between the Sia7 and Sia6 sites in the ganglioside analogue complex, in such way that it is able to form similar interactions with the protein as both Sia6 and Sia7 groups of GT1b-beta A. These interactions are the direct hydrogen bonds of O-6 with NH2 Asp1226, O-1B with NH1 Asp1226, O-1B with NH Asn1216, and the water-mediated H-bonds of O-4 with OD-1 and OD-2 Asp1147, O-2 to CO Asp1214, and O-1A to CO Asp1214.

Comparison of HC with BoNT/A-- An overlay of the Calpha atoms of this structure with those from the homologous HC fragment of BoNT/A shows a spatial coincidence in the Gal4-GalNAc3-binding site (when residues contained in a sphere of radius 12 Å around Gal4 are overlaid, the r.m.s. differences between Calpha atoms are: 0.77, 0.74, and 0.76 Å for BoNT/A to TeNT HC molecules A, B, and C, respectively). The key residues Trp1289, His1271, His1293, and Phe1218 of TeNT have counterparts in BoNT/A residues Trp1265, His1252, Gln1269, and Phe1254, respectively. The coincidence of TeNT Phe1218 and BoNT/A Phe1254 is noteworthy as the side chains point into the space from opposite directions (Fig. 7). In addition, the main chain hydrogen bonds contributing to the shape of the Gal4-GalNAc3-binding site in TeNT are the same in both structures, strongly indicating that this region of BoNT/A will also bind these ganglioside units. Gln1269 in BoNT/A is able to play the same role as His1293 in TeNT with a similar stacking of the side chain against the Trp ring. Fluorescence quenching experiments (48) have been interpreted (49) as evidence for the presence of Trp1265 in the ganglioside-binding site of BoNT/A. Data from neutralizing antibodies (50) also implicate this region (residues 1266-1272) of BoNT/A in ganglioside binding. A similar cleft is formed by Trp1261 and His1240 in the structure of BoNT/B (51). A crystallographic study of BoNT/B complexed with sialyllactose shows the carbohydrate bound to this cleft, but with the sialic acid intercalating between the Trp and His residues (51). This mode of binding contrasts with that of TeNT where the structures of complexes with a number of carbohydrates containing sialic acid (28)2 always show the sialic acid binding in the Sia7-Sia6 site with a conservation of the salt bridge between the carboxylate and Arg1226 and the hydrogen bonds between Asp1147 and the sialic acid. These data, and the lack of structural similarity between the BoNT and TeNT structures at the TeNT disialic acid-binding site could indicate fundamental differences in the way the toxins interact with gangliosides. Alternatively, the binding of sialyllactose to BoNT/B may not reflect the binding of the complete ganglioside. Our earlier studies (28) showed that the positions of binding of some monosaccharide units to TeNT HC differs to that found for the ganglioside analogue.


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Fig. 7.   A comparison of the Gal4-GalNAc3-binding site of TeNT with equivalent regions of the BoNT/A structure. The Calpha -backbone of HC (blue) is overlaid on the homologous area of BoNT/A (green). The similarity in the conformation and the sequence identity between the two toxins can be seen. The coordinates of BoNT/A were taken from the PDB data base (access code 3BTA (29)). All Calpha atoms of both molecules, with the exception of 48 residues belonging to different length loops, were overlapped.

Comparison with Other Glycosphingolipid-binding Toxins-- Cholera toxin and Shiga-like toxin are glycosphingolipid-binding toxins where structural data are available for the proteins complexed with their carbohydrate receptors. The cholera toxin receptor, ganglioside GM1, is similar to GT1b (Fig. 1) but lacks the two terminal sialic acids (Sia5 and Sia7 in Fig. 1a). In contrast with the two ganglioside sites in TeNT, in cholera toxin (36) there is one binding site in each of the five beta -subunits, with the terminal galactose and sialic acid forming the main interactions. This is very similar to the TeNT HC-GT1b-beta A interactions where the galactose Gal4 and disialo-group Sia7-Sia6 (Fig. 1) make almost all the interactions with the protein. There is some small contribution from the GalNAc3 unit but no contributions from the Gal2-Glc1 disaccharide portion. In both toxins the galactose is packed against a Trp ring and is extensively hydrogen bonded to the protein. The sialic acid-binding site in cholera toxin is a shallow groove with only one side of the carbohydrate ring making contacts with the protein. In contrast, tetanus toxin interacts extensively with the terminal sialic acid (Sia7) of the ganglioside via its carboxylate, OH-4, acetamido, and glycerol groups. The low affinity of tetanus toxin for GM1 (22, 23) is due to the loss of these strong interactions with sialic acid.

In Shiga-like toxins the glycosphingolipid receptor, Gal(alpha 1-4)Gal(beta 1-4)Glc(beta 1-1)-ceramide, does not contain sialic acid. There are three binding sites per B-subunit. In two binding sites galactose shows aromatic packing against Trp or Phe residues with extensive hydrogen bonds to the protein, as observed in tetanus toxin. In the third there is no aromatic stacking.

    DISCUSSION
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES

The crystal structure of a complex between the HC fragment of TeNT and a synthetic analogue of GT1b reported here provides the first direct structural evidence of the interaction between the protein toxin and ganglioside. The observation of two separate binding sites on both the protein and carbohydrate components is unexpected, but nonetheless demonstrates the specificity of the interaction and is consistent with published biochemical data. Similar interactions were described in our earlier report of the crystal structures of TeNT HC soaked with lactose, N-acetylgalactosamine, and sialic acid (28).

These structural data demonstrate that two sites on the GT1b molecules, the Gal4-GalNAc3 and Sia7-Sia6 groups, provide the key interactions for the TeNT-ganglioside recognition. The results are entirely consistent with the similar binding affinites observed for GT1b and GD1b gangliosides (22, 23) which differ only in GT1b possessing a terminal sialic acid on the GalNAc3 unit. The structure shows no significant interaction between this terminal sialic acid (Sia5) and the HC fragment. In contrast, the extensive interactions of the terminal sialic acid (Sia7) with the HC fragment explain why in GM1, which lacks this sugar, the affinity of the binding is considerably lower (1, 2, 23, 24).

Recent biochemical characterizations of mutant HC molecules are consistent with this structure (33, 52). Mutant HC containing a deletion of residues 1214-1219 is severely impaired in its ability to bind GT1b, having 0.5% of the activity of wild-type HC protein. This mutant lacks Asp1214 and Asn1216, residues which interact with the disialic acid present in GT1b. Another mutant containing deletions in the Gal4-GalNAc3-binding site, e.g. Delta (His1271-Asp1282) also shows reduced GT1b binding activity (1% of wild-type) and both mutants have reduced binding to primary motorneurons, suggesting that ganglioside binding is essential for binding to target cells. Replacement of His1293 with either Ala or Ser also reduces GT1b binding (12-43% of wild-type). This residue does not interact directly with the ganglioside, but forms part of the structural framework of the GalNAc4-Gal3-binding site. The loss of binding correlates with the reduction in volume of the side chain. A similar effect has been reported for mutations of Tyr1290 to Phe, Ala, or Ser (52). This residue forms the base of the binding site, making hydrophobic interactions with the carbohydrate. Changes in the volume and hydrophobicity of the side chain would disturb the structural integrity of the binding site. Similar effects explain the mutagenesis data of Halpern and Loftus (6) who showed that deletion of the COOH-terminal 5 or 10 residues reduced binding to both ganglioside GT1b and to primary spinal cord neurones. These residues do not interact with the GT1b analogue, and the reduction in ganglioside binding is probably due to alteration in the structure or stability of the HC molecule.

Simultaneous binding through both groups on the ganglioside involves more than one protein molecule and suggests that cross-linking might occur in vivo. This would depend on the membrane-attached, wild-type gangliosides making the same interactions as in the crystal complex. The carbohydrate of the synthetic ganglioside used in this work differs from that of wild-type GT1b only in the Sia6-Gal2 linkage which is alpha , in the wild-type, and beta , in this work (Fig. 1). This difference will not affect the binding of the Gal-GalNAc units of the ganglioside to the protein. With regard to the binding of the disialyl group, since identical interactions between the sialic acid units and proteins are observed in the crystal structure of a complex between TeNT HC and disialyllactose, where the Sia-Gal linkage is alpha ,2 this mode of binding is not influenced by the anomeric stereochemistry of the Sia-Gal linkage.

Although wild-type GT1b can bind at each site on the protein, cross-linking will occur only if the relative positions of the two arms of the ganglioside can interact simultaneously with more than one protein. A simple modeling experiment suggests this is possible (Fig. 8). A model of GT1b-OS can be fitted to the structure of GT1b-beta A to retain the cross-linking found in the crystal, and with the formation of the same H-bonds and salt bridge between Sia7 and the protein. There are no steric clashes in this model.


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Fig. 8.   A model of the possible cross-linking of two molecules of TeNT HC by GT1b-OS. The independent protein molecules are colored in green and claret, GT1b-beta A is yellow, and the model of GT1b-OS is blue. The red ellipse identifies the differences in orientation of Sia6 resulting from the different Sia6-Gal2 anomeric links.

The biological consequences of multivalent cross-linking would be to increase the binding affinity of the protein to the ganglioside and to induce a clustering of the toxin on the cell surface. Indeed binding of TeNT to the cell surface is characterized by punctate staining in a variety of neuronal cells types, including rat dorsal root ganglia (30) and mouse spinal cord neurons (4, 25). While this punctate staining has been inferred (4) to reflect the distribution of distinct zones where neurotransmitter release and endocytosis are proposed to take place, it could also could be explained in part by clustering of toxin with gangliosides or ganglioside-protein complexes. The clustering effect may be important in enhancing the process of internalization.

    ACKNOWLEDGEMENTS

We thank ESRF (ID13) and SRS-Daresbury (7.2) station personnel for assistance with data collection and A. Roszak and S. Prince for helpful discussions.

    FOOTNOTES

* This work was supported by Grants 053570 and 051615 from The Wellcome Trust.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

The atomic coordinates and the structure factors (code 1fv2 and 1fv3) have been deposited in the Protein Data Bank, Research Collaboratory for Structural Bioinformatics, Rutgers University, New Brunswick, NJ (http://www.rcsb.org/).

|| To whom correspondence should be addressed. Tel.: 44-141-3305954; Fax: 44-141-3304888; E-mail: neil@chem.gla.ac.uk.

Published, JBC Papers in Press, June 19, 2001, DOI 10.1074/jbc.M103285200

2 C. Fotinou, P. Emsley, I. Black, N. F. Fairweather, and N. W. Isaacs, unpublished data.

    ABBREVIATIONS

The abbreviations used are: TeNT, tetanus neurotoxin; HC, COOH-terminal domain of heavy chain of TeNT; BoNT, botulinum neurotoxin; GalNAc, N-acetylgalactosamine; Sia, sialic acid; Cer, ceramide; PEG, polyethylene glycol; GD1b, Gal(beta 1-3)GalNAc(beta 1-4)(NeuAc(alpha 2-8)NeuAc(alpha 2-3))Gal(beta 1-4)Glc(beta 1-1)Cer; GT1b, NeuAc(alpha 2-3)Gal(beta 1-3)GalNAc(beta 1-4)(NeuAc(alpha 2-8)NeuAc(alpha 2-3))Gal(beta 1-4)Glc(beta 1-1)Cer; GT1b-OS, oligosaccharide part of the GT1b ganglioside; GT1b-beta A, synthetic GT1b oligosaccharide analogue; r.m.s., root mean square.

    REFERENCES
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES

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