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Originally published In Press as doi:10.1074/jbc.M105868200 on August 10, 2001

J. Biol. Chem., Vol. 276, Issue 42, 38885-38892, October 19, 2001
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The Eighth FIII Domain of Human Fibronectin Promotes Integrin alpha 5beta 1 Binding via Stabilization of the Ninth FIII Domain*

Harri AltroffDagger, Christopher F. van der Walle§, Judith Asselin, Richard Fairless, Iain D. Campbell, and Helen J. Mardon||

From the Nuffield Department of Obstetrics and Gynecology, University of Oxford, Women's Centre, Level 3, John Radcliffe Hospital, Headington, Oxford OX3 9DU, the § School of Pharmacy and Pharmacology, University of Bath, Bath BA2 7AY, and the  Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, United Kingdom

Received for publication, June 25, 2001, and in revised form, August 8, 2001


    ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

Binding of the extracellular matrix molecule fibronectin to the integrin receptor alpha 5beta 1 elicits downstream signaling pathways that modulate cell function. Fibronectin-alpha 5beta 1 interaction occurs via the conserved RGD sequence in the tenth FIII (FIII10) domain of fibronectin. A synergistic site containing the sequence PHSRN in the adjacent FIII9 domain has also been identified. Here we investigate the function of the eighth FIII domain in integrin-mediated cell adhesion using a wide range of methods, including biochemical, biological, and biophysical assays of integrin binding, cell adhesion, and protein denaturation. Mutation of the FIII9 synergistic site (PHSRN to PHAAA) in FIII9-10 reduced the binding activity for integrin alpha 5beta 1 to levels observed for FIII10 alone, but the corresponding mutant in FIII8-9-10 showed no loss of binding activity. Cell adhesion assays also demonstrated enhanced functional activity of constructs containing FIII8. Equilibrium chemical denaturation studies indicated that FIII8 confers conformational stability upon FIII9, but only if the exposed loops, PHSRN and VKNEED on FIII9 and FIII8, respectively, are intact. These results demonstrate that the loss of integrin binding activity, observed upon alteration of the PHSRN synergistic site of FIII9-10, results partly from a loss of conformational stability of FIII9. Our data suggest a mechanism for integrin alpha 5beta 1-fibronectin interaction, which in addition to the primary RGD binding event, involves a conformation-sensitive scanning by the integrin for accessible sites on the ligand, whereupon full activation of downstream signaling occurs.


    INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

The binding of fibronectin (FN)1 to the integrin family of transmembrane receptors elicits downstream signaling events that can modulate diverse cellular processes including cell adhesion, spreading, proliferation, migration, and invasion. The regulated adhesion of cells to FN thus has a key function in embryonic development and tissue homeostasis, and aberrant regulation of this process is often associated with disease. The understanding of the molecular basis of FN-integrin interactions has wide implications for the manipulation of normal and disease tissue processes.

FNs are large glycoproteins that are abundant in the extracellular matrix (ECM) of most tissues (for a review, see Ref. 1). The mature FN molecules are dimers of two C-terminally disulfide-linked monomers of ~220 kDa. Each monomer consists of homologous repeating units or domains, called type I, II, and III domains. The type III FN domains (FIII) are the most common and the largest, composed of around 90 amino acids arranged in seven anti-parallel beta -strands (2). FIII domains occur in many diverse intra- and extracellular proteins (3).

Integrins are heterodimeric cell-cell and cell-ECM adhesion receptors composed of one alpha -subunit and one beta -subunit and classified into eight different groups according to the identity of their beta -subunit (for a review, see Ref. 4). Integrin-mediated signal transduction occurring in response to ligand binding involves phosphorylation of intracellular molecules such as focal adhesion kinase (pp125FAK) and paxillin, and consequent induction of second messenger pathways (5). The central cell binding domain (CCBD) of FN contains binding sites for a number of integrins, including alpha 5beta 1. The minimal cell recognition sequence in the CCBD is the RGD motif in the tenth FIII domain (FIII10). Synthetic peptides containing RGD exhibit some cell adhesive activity and block cell adhesion to FN. The RGD motif is a conserved sequence occurring in several other distinct extracellular matrix proteins (6). An additional site, PHSRN, that is required for activity close to that evoked by intact FN, has been identified in the adjacent FIII9 domain (7). Residues associated with this site have been shown to act synergistically with RGD in alpha 5beta 1- and alpha IIbbeta 3-mediated cell adhesion (8). In addition, deletion mutagenesis studies have suggested involvement of a further site, N-terminal to FIII9, in alpha 5beta 1 binding, although no specific amino acids were identified (9). More recently, additional alpha 5beta 1 binding activity has been described in the fragment spanning domains FIII6 to FIII10 (10). However, the specific functions of the individual FIII domains N-terminal to FIII9 in FN-integrin binding have not been reported.

Resolution of the structure of the human FIII7-10 string of four domains by x-ray crystallography (11) and heteronuclear NMR studies of the human FIII10 domain (12) have provided key information for the understanding of integrin-ligand recognition and binding. The NMR and crystal structures reveal that the RGD sequence of FIII10 resides in a loop extending from the domain surface, and NMR-derived data further suggest that this RGD loop is flexible (13, 14). This flexibility may contribute to the promiscuity of RGD-integrin interactions and provide an explanation for the blocking of cell adhesion function by small flexible RGD peptides. The PHSRN sequence in FIII9 and the RGD loop are on the same side of the FIII9-10 pair but PHSRN, which is also located on a loop, is less exposed. Structure-function studies have indicated that the relative spatial configuration of the RGD and PHSRN loops in FIII10 and FIII9 is critical for function (15).

Analysis of specific cellular events, elicited in response to cell adhesion to wild-type and mutant FIII9, FIII10, and FIII9-10 domains, suggests that cell attachment occurs primarily via FIII10, while maximal activation of pp125FAK and downstream signaling is dependent upon FIII9 (16). The two-site model of FN-integrin interaction implied in these studies is in agreement with earlier data proposing that the synergy site binds to the alpha 5-subunit and the RGD site binds to the beta 1-subunit (10).

The characterization of binding sites on integrins that interact with the FIII domains has largely focused on the RGD and PHSRN motifs, although it is not clear whether or not these are the only motifs required for ligand-receptor interaction. Indeed, recent studies have suggested additional sites in FIII9 and FIII10 that contribute to ligand binding (17). In this study we investigate the specific role of the FIII8 domain in integrin alpha 5beta 1 recognition by characterizing wild-type and mutant FIII8-9-10 proteins by the use of solid-phase binding studies, biological assays, and biophysical methods. Our data suggest that native FIII8 and various mutations in FIII8 and FIII9 can modulate FN binding to integrin alpha 5beta 1. We show that there is a strong correlation between structural stability of FIII9 and its integrin-mediated function.

    EXPERIMENTAL PROCEDURES
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

Construction of pGEX-FIII Clones-- The construction of pGEX-FIII9, pGEX-FIII10, and pGEX-FIII9-10 has been described elsewhere (18). The DNA sequences of the FIII constructs were amplified from the plasmid pFHL1 (19). pGEX-FIII8 was constructed using the primers GGCTGTTCCTCCTCCCACTGA (FIII8-5') and TTATTATGTTTTCTGTCTTCCTCTAAG (FIII8-3'). The PCR product was ligated directly into SmaI-restricted pGEX2T vector (Amersham Pharmacia Biotech). pGEX-FIII8-9-10 was constructed by amplification of the FIII8-9-10 DNA sequence using the primers FIII8-5' and TTATTATGTTCGGTAATTAATGGAAA (FIII10-3'). The amplified products were ligated into the pGEX2T vector restricted with SmaI. pGEX-FIII8-9 was constructed by amplification of the FIII8-9 DNA sequence using the primers ATAATTTAGCGGCCGCGGCTGTTCCTCCTCCCACT (FIII8-NotI-5') and ATAGTTTAGCGGCCGCTATGTTGATTGTTGGCCAAT (FIII9-3'). The PCR product was then restricted with NotI and ligated into pGEX4T3 (Amersham Pharmacia Biotech), linearized with NotI.

Mutations to the C-C' loop (1274VKNEED1279) in FIII8 and to the C'-E loop (1376PHSRN1380) in FIII9 were made following the QuickChangeTM protocol (Stratagene). The primers used to mutate Ser1378-Arg1379- Asn1380 to Ala1378-Ala1379-Ala1380 (PHSRN to PHAAA) were GTGCCCCACGCTGCGGCTTCCATCAC (forward) and GTGATGGAAGCCGCAGCGTGGGGCAC (reverse). The primers used to mutate Val1274-Lys1275-Asn1276 to Ala1274-Ala1275-Ala1276 (VKNEED to AAAEED) were GGTGCGTTACTCACCTGCGGCAGCTGAGGAAGATGTTGCAG (forward) and CTGCAACATCTTCCTCAGCTGCCGCAGGTCAGTAACGCACC (reverse). The primers used to mutate Glu1277-Glu1278-Asp1279 to Ala1277-Ala1278-Ala1279 (VKNEED to VKNAAA) were CTCACCTGTGAAAAATGCGGCAGCTGTTGCAGAGTTGTC (forward) and GACAACTCTGCAACAGCTGCCGCATTTTTCACAGGTGAG (reverse). pGEX-FIII8-9-10 constructs containing the PHAAA mutation in the FIII9 domain were further mutated in the VKNEED loop of FIII8 using the primers described above. Notations used for the various mutants are as follows: PHSRN to PHAAA (mSRN); VKNEED to AAAEED (mVKN); VKNEED to VKNAAA (mEED); PHSRN to PHAAA and VKNEED to AAAEED (mSRN, mVKN); PHSRN to PHAAA and VKNEED to VKNAAA (mSRN, mEED) (see Table I). The DNA sequence of all created constructs was confirmed using Sanger DNA sequencing methodology (Dept. of Biochemistry, University of Oxford).

Expression and Purification of FIII Proteins-- GST·FIII fusion proteins were expressed in Escherichia coli and purified as described previously (18). For cell spreading inhibition assays and equilibrium chemical denaturation studies, cleaved FIII proteins were obtained by thrombin digest of the respective GST fusion proteins bound to the GST-conjugated Sepharose resin (2.5 units of thrombin per mg of fusion protein). Cleaved FIII protein was subsequently washed off the resin with PBS, dialysed exhaustively in 40 mM Tris-HCl, pH 8 (buffer A), and subjected to ion exchange chromatography using Q-Sepharose resin developed with a NaCl gradient of 0-1 M in buffer A over 30 min.

Purity and Mr of all proteins was assessed by SDS-PAGE, visualized with Coomassie Blue. Protein concentration was calculated using absorption of the solution at 280 nm, with the extinction coefficient estimated using the program peptidesort (Wisconsin package ver. 10.0, Genetics Computer Group, Madison, WI), exploiting the procedure of Gill and von Hippel (20).

Purification of Integrin alpha 5beta 1-- Integrin alpha 5beta 1 was purified from human placenta as described previously (21), with some modifications. Briefly, a placenta was homogenized in 200 ml ice-cold lysis buffer (50 mM Tris-HCl, pH 7.4, 1 mM MgCl2, 1 mM MnCl2, 1 mM CaCl2, 150 mM NaCl, 1% Triton X-100) containing sodium vanadate (1 mM), leupeptin (10 µg ml-1), aprotinin (10 µg ml-1), and phenylmethylsulfonyl fluoride (1 mM). The homogenate was centrifuged at 20,000 × g for 1 h at 4 °C, and the supernatant was loaded onto protein A-conjugated Sepharose resin (Amersham Pharmacia Biotech) and subsequently onto Sepharose resin conjugated to antibody clone BIIG-2 raised against the alpha 5 subunit, both resins having been pre-equilibrated with lysis buffer. The integrin was eluted in 2 bed volumes of 20 mM sodium acetate, pH 3.1, containing 30 mM octyl-beta -glucoside (Sigma-Aldrich). 1-ml fractions were collected and simultaneously neutralized in 10× lysis buffer without Triton X-100 and containing 300 mM octyl-beta -glucoside. The integrin was stored in a buffer containing the divalent cations Mn2+, Mg2+, and Ca2+.

ELISA-- 96-well flat-bottomed plates (Nunc) were coated with a 10-fold dilution of the integrin stock solution (0.1 mg ml-1) in 25 mM Tris-HCl, pH 7.4, 150 mM NaCl, 1 mM MnCl2, 0.1 mM MgCl2, 0.1 mM CaCl2 (EB) and left overnight at 4 °C. The plates were then washed three times with EB and blocked with 5% bovine serum albumin (BSA) in EB for 1 h at 37 °C. The wells were washed as above, and the plates were incubated for 2 h at 37 °C with the relevant GST·FIII fusion proteins diluted in EB containing 1% BSA. The wells were processed as above, and mouse anti-GST antibody (1:2000 dilution in EB containing 1% BSA) (Sigma) was added. The plates were incubated for 1 h at room temperature, the wells washed with EB, and sheep anti-mouse horseradish peroxidase (HRP)-conjugated antibody (Sigma) was added (1:2500 dilution in EB containing 1% BSA). The plates were incubated for 1 h at room temperature, the wells washed as above, and incubated with the Sigma FastTM HRP tablet set according to the manufacturer's instructions. The absorbance of the solution was measured at 405 nm. Assays were performed in triplicate, and background antibody binding in the absence of ligand was subtracted from the readings. Nonspecific binding of GST fusion proteins to uncoated wells containing BSA only was measured separately for each ligand concentration point and subsequently subtracted from the corresponding values for total binding. Dose-response data from the assays were analyzed by non-linear regression using a sigmoidal curve fit (Prism, GraphPad Software).

Cell Attachment and Spreading Assays-- Baby hamster kidney (BHK) fibroblasts were used in cell attachment and spreading assays and cell spreading inhibition assays, performed as described elsewhere (18). The coating efficiencies of FIII8-9-10, FIII9-10, FIII8-9, FIII10, and FIII8 were assessed by ELISA and confirmed to be similar at all the concentrations used in the assays (data not shown). Spreading assays were performed in quadruplicate and attachment assays in triplicate in each experiment. Cell attachment was assessed by staining the adherent cells with 0.1% crystal violet as described elsewhere (18). Spreading inhibition assays were performed using wells coated with 10 µg ml-1 of FN (Sigma) in PBS. Cells were preincubated for 20 min at 37 °C in suspension in the presence of doubling dilutions of cleaved FIII proteins before plating, and the assays were performed as described above. The data obtained are expressed as the means ± S.E. of at least three independent experiments. Differences between the means were calculated using a non-paired Student's t test for p < 0.05.

Immunocytochemistry-- BHK cells were seeded onto BSA-blocked glass coverslips coated with FIII9-10, [mSRN]FIII9-10, FIII8-9-10 or [mSRN]FIII8-9-10 at 12.5 µg ml-1, and incubated for 1 h at 37 °C in 5% CO2. The coverslip cultures of BHK cells were then washed in PBS, fixed with 3% paraformaldehyde in PBS, permeabilized with 10 mM Hepes, pH 7.4, 200 mM sucrose, 3 mM MgCl2, 50 mM NaCl, 0.5% Triton X-100, and washed again. Subsequent incubation with primary mouse anti-vinculin antibody (Sigma), diluted 1:400 in PBS containing 0.1% BSA, was followed by incubation with Texas Red-conjugated anti-mouse antibody (Jackson Immunoresearch Laboratories), diluted 1:75 in PBS containing 0.1% BSA. Actin was visualized with the use of fluorescein-phalloidin (Molecular Probes, dilution 1:40). The coverslips were then washed in PBS and inverted over a drop of Vectashield mounting medium containing DAPI (Vector Laboratories). Mouse IgG (Coulter Immunotech), substituted for the primary antibody at 10 µg ml-1, was used as a negative control. Staining was viewed using a Leica DMRBE microscope. Image capture and analysis was achieved by the use of Openlab image capture and manipulation software (Improvision).

Equilibrium Chemical Denaturation-- Equilibrium unfolding experiments were performed on recombinant FIII proteins (cleaved from GST·FIII fusion proteins as described above) incubated in 0 to ~8 M GdnHCl in 10 mM HEPES, 100 mM NaCl, pH 7.4. The molarity of the GdnHCl solution was calculated by the weight of the solution (22). Protein samples were rapidly diluted 11-fold in GdnHCl and allowed to equilibrate for 10 min at 25 °C before measuring fluorescence emitted at 350 ± 3 nm, using an excitation wavelength of 278 nm on a Shimadzu RF5001PC spectrofluorimeter, at 25 °C. All unfolding experiments were repeated independently, and the data were fitted for a two-state unfolding mechanism as described previously (22).

    RESULTS
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

FIII8 Compensates for a Defective FIII9 Synergy Site in Integrin alpha 5beta 1 Binding-- The influence of FIII8 upon the interaction of FN with integrin alpha 5beta 1 was analyzed in solid-phase ligand binding assays. An initial assessment of the integrity of the integrin preparation was made by comparing the binding affinities of the individual GST·FIII10, GST·FIII9, and GST·FIII8 domains, the GST·FIII9-10, and GST·FIII8-9 domain pairs, the GST·FIII8-9-10 domain triplet, and GST alone (Fig. 1A). The observed binding affinities of the recombinant proteins were considered not to be perturbed by the GST carrier protein or its dimerization, since the isolated GST dimer had negligible binding activity to alpha 5beta 1 integrin, and the same carrier GST was present in all the proteins tested. Of the individual FIII domains, only FIII10 exhibited alpha 5beta 1 binding activity (Fig. 1A), as is consistent with previous data (18). Comparison of the dose-response curves for FIII9-10 and FIII10 (Fig. 1A) shows that addition of FIII9 increases the affinity for alpha 5beta 1 (the apparent Kd was ~50-fold lower than for FIII10 alone), confirming the synergistic action of FIII9. No binding was observed for the FIII8-9 domain pair. The addition of FIII8 N-terminal to FIII9-10 did not significantly alter the integrin binding affinity (Fig. 1A).


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Fig. 1.   Solid-phase binding of recombinant wild-type and mutant GST·FIII domains to purified integrin alpha 5 beta 1 as measured by ELISA. A, dose-response curves for wild-type FIII domains FIII8 (triangle ), FIII9 (×), FIII10 (black-down-triangle ), FIII8-9 (down-triangle), FIII9-10 (black-square), FIII8-9-10 (open circle ), and GST (black-triangle). Results are represented as OD405 values for specific binding. B, binding of wild-type and mutant domains FIII9-10 (black-square), [mSRN]FIII9-10 (), [mSRN]FIII8-9-10 (down-triangle) and FIII10 (black-down-triangle ). Results are normalized and expressed as percentages of maximum binding activity.

The integrin binding capacities of the synergy site mutants GST· [mSRN]FIII8-9-10 and GST·[mSRN]FIII9-10 (see Table I) were subsequently compared by ELISA. Alanine substitution of the amino acids SRN in the FIII9 synergy site reduced the alpha 5beta 1 binding affinity of FIII9-10 to the level observed for the single FIII10 domain (Fig. 1B). Comparison of the synergy site mutants GST· [mSRN]FIII8-9-10 and GST·[mSRN]FIII9-10, however, showed that the FIII8 domain can recover alpha 5beta 1 binding activity that was lost as a result of mutation of part of the FIII9 synergy site (Fig. 1B). These data thus indicate a role for FIII8 in integrin alpha 5beta 1 binding in the absence of a functional PHSRN site in FIII9.

                              
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Table I
Notations used for mutant FIII constructs

FIII8 Confers Additional Cell Adhesion Activity on FIII9-10-- We further explored the possible contribution of FIII8 to FN-integrin interaction in biological assays of cell attachment and spreading (Fig. 2). Attachment assays with BHK fibroblasts (Fig. 2A) showed that neither FIII8 alone nor the FIII8-9 pair exhibited any cell attachment activity. The activity of FIII8-9-10 was greater than that of FIII9-10, although this difference was less pronounced at higher concentrations of coating protein. In comparison with cell attachment, cell spreading was more sensitive to the presence of FIII8 (Fig. 2B); the ability of FIII8-9-10 to induce cell spreading was ~50 and ~30% higher than that of FIII9-10 at coating concentrations of ~0.2 and ~2 µM, respectively.


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Fig. 2.   FIII8 confers additional cell adhesion activity on the FIII9-10 domain pair. A, attachment of BHK cells to plastic coated with FIII8-9-10 (open circle ), FIII9-10 (black-square), FIII8-9 (down-triangle) or FIII8 (triangle ). Results are expressed as percentages of maximum cell attachment. B, BHK cell spreading in response to FIII8-9-10 (open circle ), FIII9-10 (black-square), FIII8-9 (down-triangle) and FIII8 (triangle ), expressed as percentages of cells spread. C, inhibition of BHK cell spreading on FN-coated surfaces by cleaved FIII8-9-10 (open circle ), FIII9-10 (black-square), FIII10 (black-down-triangle ) or FIII8 (triangle ), expressed as percentages of cells spread. Error bars represent the S.E. of at least three independent experiments.

An alternative approach to the assays described above was adopted in which the binding of FIII domains in solution to the cell surface integrins was assessed, thus negating the effect of possible conformational constraints imposed by the immobilization of the protein ligand to the plastic substrate. Assays of inhibition of cell adhesion on FN-coated surfaces, testing the ability of FIII8 to enhance the inhibitory activity of FIII9-10, were performed using independent FIII domains cleaved from the GST carrier protein (Fig. 2C). The FIII8 and FIII10 domains in isolation had no effect upon cell adhesion at the concentrations tested, confirming our previous data (18). Wild-type FIII8-9-10 had a more marked effect on cell spreading than FIII9-10, showing ~20% more inhibitory activity at the concentration of ~2 µM. These results thus differ from the ELISA data in which addition of FIII8 to the wild-type FIII9-10 ligand produces no enhancement of solid-phase integrin binding. This probably reflects the different nature of the two assays. ELISA only provides information about the requirements for primary ligand binding event and is not influenced by integrin responses secondary to the initial recognition, such as receptor clustering (23) and inside-out signaling, which affects ligand affinity (24).

Biological assays were further employed to assess the contribution of FIII8 to the induction of downstream cellular responses in the absence of a functional synergy site in FIII9-10 (Fig. 3). The FIII9-10 mutant carrying alanine substitutions in the synergy site (SRN to AAA: [mSRN]FIII9-10) exhibited reduced levels of cell attachment, approaching those observed for FIII10 (Fig. 3A). Addition of FIII8 to [mSRN]FIII9-10 (in the mutant [mSRN]FIII8-9-10) recovered the cell attachment activity lost upon mutation of the synergy loop (Fig. 3A). In cell spreading assays, the activity of [mSRN]FIII9-10 likewise dropped substantially (by at least 50% as compared with the wild-type FIII9-10), whereas [mSRN]FIII8-9-10 supported elevated levels of cell spreading in comparison with [mSRN]FIII9-10, rescuing the effect of the mutated synergy site in FIII9 (Fig. 3B). These observations are therefore in accordance with ELISA data for integrin binding activity of these mutants (see Fig. 1B).


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Fig. 3.   Functional assays of the ability of FIII8 to recover activity lost by the mutation of the PHSRN synergy site of FIII9. A, attachment of BHK cells as assayed against doubling dilutions of FIII8-9-10 (open circle ), FIII9-10 (black-square), FIIII10 (black-down-triangle ), [mSRN]FIII9-10 () or [mSRN]FIII8-9-10 (down-triangle). Results are expressed as percentages of maximum attachment. B, cell spreading on plastic surfaces coated with FIII8-9-10 (open circle ), FIII9-10 (black-square), FIII10 (black-down-triangle ), [mSRN]FIII9-10 () or [mSRN]FIII8-9-10 (down-triangle), expressed as percentages of cells spread.

The ability of FIII8 to participate in integrin-induced cellular signaling was further determined by examining focal adhesion complex formation in response to [mSRN]FIII8-9-10 carrying the FIII9 synergy site mutation (Fig. 4). Vinculin-positive focal adhesion complexes observed in cells plated onto FIII9-10 and FIII8-9-10 (Fig. 4, A and C) did not form in response to the mutant domain pair [mSRN]FIII9-10 (compare Fig. 4, A and B). However, the ability to promote focal adhesion complex formation was restored by the presence of FIII8 in [mSRN]FIII8-9-10 (Fig. 4D), providing further evidence that FIII8 contributes specifically to the induction of integrin-dependent downstream signaling responses.


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Fig. 4.   The effect of FIII8 on focal adhesion complex formation in BHK cells. The cells were plated onto FIII9-10 (A), [mSRN]FIII9-10 (B), FIII8-9-10 (C) or [mSRN]FIII8-9-10 (D), and stained for vinculin (red), actin (green), and the nuclei (blue). Vinculin-positive structures resembling focal adhesion complexes can be seen at the edges of cells spread on FIII9-10, FIII8-9-10 or [mSRN]FIII8-9-10, but not in cells plated onto [mSRN]FIII9-10. Bars, 10 µm.

The VKNEED Sequence in the Exposed C-C' Loop of FIII8 Has a Function in Cell Adhesion-- The crystal structure of FIII7-10 (11) reveals a protruding loop between the beta -strands C and C' of FIII8, on the same face of the molecule as the exposed loops containing the RGD and PHSRN sites (Fig. 5). Given the location and configuration of this loop in FIII8, we tested the possibility that it contributes specifically to the integrin-binding activity of FIII8 observed in the GST·[mSRN]FIII8-9-10 mutant. The residues VKNEED within the loop were substituted with alanine both in the wild-type GST·FIII8-9-10 construct and in the GST·[mSRN]FIII8-9-10 synergy site mutant (Table I). The resultant mutants GST·[mVKN]FIII8-9-10 and GST·[mEED]FIII8-9-10 did not show any difference in alpha 5beta 1 binding affinity when compared with the native GST·FIII8-9-10 protein (Fig. 6A). The binding affinities of double mutants GST·[mSRN,mVKN]FIII8-9-10 and GST·[mSRN,mEED]FIII8-9-10 were also similar to that of GST·FIII8-9-10 (data not shown). These results therefore suggest that the VKNEED sequence in FIII8 is not a primary recognition motif for alpha 5beta 1 integrin.


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Fig. 5.   Ribbon diagram of FIII domains eight to ten. Atom coordinates were obtained from the Protein Data Bank (PDB ID: 1FNF) (29) and imaged using the program Rasmol (www.umass.edu/microbio/rasmol) without modification. A, FIII8-9-10 viewed lengthwise and B, end-on with FIII10 facing outwards. The beta -strands are shown as ribbons (light-gray) and the three exposed loops, V1274-D1279, P1376-N1380, and R1493-D1495 (black) as ball and stick diagrams in A and cartoons in B. Both diagrams show that these three loops protrude from the main FIII body in approximately the same plane.


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Fig. 6.   Assessment of functional activity of FIII8-9-10 mutants with perturbed VKNEED sequence. A, dose-response curves for binding of FIII8-9-10 (open circle ), [mVKN]FIII8-9-10 (×) and [mEED]FIII8-9-10 (black-square) to integrin alpha 5beta 1. Results are normalized and expressed as percentages of maximum binding activity. B, cell spreading on plastic coated with FIII8-9-10 (open circle ), [mVKN]FIII8-9-10 (×), [mEED]FIII8-9-10 (black-square), [mSRN]FIII8-9-10 (down-triangle), [mSRN,mVKN]FIII8-9-10 (), [mSRN,mEED]FIII8-9-10 (black-triangle) or [mSRN]FIII9-10 (), expressed as percentages of cells spread. Error bars represent the S.E. of four independent experiments.

The possible function of the VKNEED sequence of FIII8 in promoting cell adhesion was determined using the above described mutants in cell spreading assays (Fig. 6B). In experiments comparing the activity of the VKN and EED mutants (Table I), lower numbers of cells spread on surfaces coated with [mVKN]FIII8-9-10 and [mEED]FIII8-9-10 than on those coated with wild-type FIII8-9-10 (~65 and ~80% of FIII8-9-10 activity, respectively, at the concentration of ~0.1 µM) (Fig. 6B).

Cell spreading in response to GST·[mSRN,mVKN]FIII8-9-10 and GST·[mSRN,mEED]FIII8-9-10 at low coating concentration (~0.1 µM) was reduced to ~5 and ~35% of wild-type FIII8-9-10 activity, respectively, but remained higher than that supported by [mSRN]FIII9-10 (Fig. 6B). The mutants [mVKN]FIII8-9-10 and [mSRN,mVKN]FIII8-9-10 were biologically less active than [mEED]FIII8-9-10 and [mSRN,mEED]FIII8-9-10, respectively, suggesting that the residues EED were more tolerant to substitution by AAA than the residues VKN. These data, while contrasting those from solid-phase integrin binding assays (see Fig. 6A), reveal that the VKNEED loop contributes to cell adhesion, accounting for some, but not all, of the additional adhesive activity contained within FIII8.

FIII8 Confers Conformational Stability on FIII9-- The FIII9 domain in the FIII9-10 pair is relatively unstable in comparison with FIII10 (14), while the configuration of the RGD and PHSRN sites with respect to each other is critical for functional activity (15). The potential effect of FIII8 on the stabilization of FIII9-10, which would have consequent effects on functional activity revealed in the ELISAs and cell spreading assays, was thus assessed. Equilibrium unfolding experiments using GdnHCl were carried out as described previously (22). These experiments exploit the presence of a buried tryptophan in a similar position in each of the three FIII domains, whose fluorescence properties are sensitive to conformation. A Delta G value can be determined from the ratio of folded to unfolded protein observed at each GdnHCl concentration (designated as [GdnHCl]). Three related parameters, Delta G(H2O) (the free energy of unfolding in the absence of denaturant), m (the dependence of Delta G on [GdnHCl]) and [GdnHCl]1/2 (the denaturant concentration giving 50% unfolding) are used to characterize the curves for a two-state unfolding mechanism (Delta G(H2O) = m[GdnHCl]1/2). This analysis is most robust when there are well defined pre- and post-transition baselines (25); the problem of ill-defined baselines mainly arises with free FIII9. It has been shown that FIII10 undergoes a three-state folding process (26). However, the third step is only readily detected using guanidinium isothiocyanate as a denaturant. For the analysis here, where the goal is to understand relative effects on domain stability rather than folding mechanisms, a two-state mechanism of unfolding for FIII domains is assumed (14).

The observed equilibrium denaturation of FIII9-10 shows two transition regions (Fig. 7A, inset), in good agreement with previous data (14). The two regions correspond to the initial denaturation of FIII9 at low concentrations of GdnHCl, followed by the denaturation of FIII10. For clarity, only the first denaturation steps for FIII9-10 and FIII8-9-10 are shown in Fig. 7A, since we are mainly concerned with the unfolding of the FIII8 and FIII9 domains.


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Fig. 7.   Thermodynamic comparison of related FIII domains and correlation of their conformational stability with cell adhesion activity. Equilibrium denaturation versus [GdnHCl] for the first denaturation step in wild-type (A) and mutant (B) FIII proteins. (A, inset, equilibrium denaturation of FIII9-10 in GdnHCl. Plot of the fluorescence intensity at 350 nm versus [GdnHCl], showing the two transition regions.) Symbols in A: black-down-triangle , FIII10; ×, FIII9; triangle , FIII8; down-triangle, FIII8-9; black-square, FIII9-10; open circle , FIII8-9-10. Symbols in B: open circle , FIII8-9-10; down-triangle, [mSRN]FIII8-9-10; ×, [mVKN]FIII8-9-10; black-square, [mEED]FIII8-9-10; , [mSRN,mVKN]FIII8-9-10; black-triangle, [mSRN,mEED]FIII8-9-10. C, the BHK cell spreading values for [mSRN,mVKN]FIII8-9-10, [mSRN,mEED]FIII8-9-10, [mSRN]FIII8-9-10, [mVKN]FIII8-9-10, [mEED]FIII8-9-10 and FIII8-9-10 (from left to right) at 0.1 µM coating concentration as plotted against their respective [GdnHCl]1/2 values for FIII8-9 unfolding.

The isolated FIII8 domain denatured at slightly higher GdnHCl concentrations than the isolated FIII9 domain ([GdnHCl]1/2 being equal to 1.13 M, as opposed to 0.78 M for FIII9), but both domains unfolded readily in comparison with FIII10 ([GdnHCl]1/2 = 4.91 M) (Table II). In addition, m was much higher for FIII8 than for FIII9 and FIII10, resulting in an unexpectedly high conformational stability (Delta G(H2O) = 8.40 kcal mol-1). Since the domains have similar native folds, this suggests that FIII8 unfolds more completely in GdnHCl than FIII9 or FIII10. It should be noted that because FIII9 unfolds at very low denaturant concentrations, there is no baseline at low concentrations, which compromises the calculation of its conformational stability (Delta G(H2O)). This has been reported previously (14) and is considered not to affect significantly the overall interpretation of the data. In general, comparison of stability is clearest using [GdnHCl]1/2 rather than Delta G(H2O) because of errors in the calculation of the slope, m; therefore the former will be given more emphasis here.

                              
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Table II
Equilibrium denaturation parameters for the first denaturation step of the recombinant FIII protein

The midpoint of denaturation for the first transition region of the FIII9-10 pair ([GdnHCl]1/2 = 2.18 M) was shifted to the right around 3-fold as compared with the isolated FIII9 domain ([GdnHCl]1/2 = 0.78 M). Since domain unfolding is independent, this effect is attributed to an increase in the stability of FIII9 when attached to FIII10. In contrast to the two-stage transition seen for FIII9-10, the unfolding of the FIII8-9 pair occurs over one transition region, suggesting that the two domains unfold co-operatively. The midpoint of the first denaturation step ([GdnHCl]1/2) of FIII8-9-10 is modestly higher than that of FIII9-10 (Fig. 7A and Table II).

The possibility that the C-C' loop of FIII8 is involved in long range effects upon the structural stability of FIII9 was investigated using the synergy site and VKNEED mutants of FIII8-9-10. All FIII8-9-10 mutants showed a reduced stability compared with wild-type FIII8-9-10 (Fig. 7B), suggesting that this assumption was correct. The VKNEED mutants, [mVKN]FIII8-9-10 and [mEED]FIII8-9-10, showed a modest increase in the stability of the FIII8-9 pair when compared with the synergy site mutant [mSRN]FIII8-9-10. The double mutants [mSRN,mVKN]FIII8-9-10 and [mSRN,mEED]FIII8-9-10 unfolded at the lowest concentrations of GdnHCl (Fig. 7B). The value of m (Table II) was lower for the double mutants than for the corresponding single mutants (for example, compare [mSRN,mVKN]FIII8-9-10 with [mSRN]FIII8-9-10 and [mVKN]FIII8-9-10), indicating that the FIII8-9 pair in the double mutants unfolds to a smaller extent.

Plotting of the [GdnHCl]1/2 values of wild-type and mutant FIII8-9-10 constructs against the percentage of BHK cells spread at a 0.1 µM coating concentration (Fig. 7C) reveals that there is a direct correlation between protein stability and biological activity.

    DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

We have applied a combination of biological, biochemical, and biophysical approaches to elucidate the nature of the alpha 5beta 1-FN interaction beyond the known requirements for the binding sites in FIII9 and FIII10. The main findings from this study are as follows: (i) the presence of the FIII8 domain maintains ligand binding potency in the absence of an intact FIII9 synergy site; (ii) FIII8 has a function in the stabilization of the FIII9 domain, and (iii) short amino acid sequences in FIII8 and FIII9 have short and long range stabilization effects that are necessary for the biological activity of the CCBD.

In this study we have attempted to dissect further the functional sites in the CCBD of human FN that are required for integrin alpha 5beta 1-mediated cell adhesion. Previous data have shown that substitution of Asp for Arg1379 in FIII9 results in a marked decrease in alpha 5beta 1-mediated adhesion activity, and substitution of other residues in the PHSRN motif in chimeric FIII9-10 pairs has a lesser effect on cell adhesion (7). Our data demonstrate that alanine substitution of only three residues in the motif (mSRN) abolishes the synergistic effect of FIII9 on alpha 5beta 1 binding.

One important observation in our study is that FIII8 increases the biological activity of FIII9-10 and is able to recover the biological activity lost on mutation of the synergy site (PHSRN) to PHAAA (see Figs. 1B and 3). This suggests that the requirement for PHSRN may only be critical for integrin binding in the case of the isolated FIII9-10 pair and that in the FN molecule the criteria for integrin alpha 5beta 1 recognition are likely to include effects from additional residues in the CCBD and from domains N-terminal to FIII9. Our results are in general agreement with a recent study (17) exploring the effect of alanine substitution of residues both in the PHSRN motif and elsewhere in the FIII7-8-9-10 domain tandem. While confirming that Arg1379 is the single most important synergistically acting residue within FIII9, the authors see only a minimal reduction in cell adhesion when this site alone is mutated. However, in combination with additional substitutions (notably, for Arg1369, Arg1371, Arg1374, or Thr1385+Asn1386) the drop in adhesive activity is much more pronounced; an indication that the synergistic effect in FIII7-10 is not limited to the PHSRN sequence but actually involves a larger region of FIII9. This finding may explain why the mutant [mSRN]FIII8-9-10 does not show reduced adhesive potential in our assays, especially when considering that this mutant and a single Arg1379 mutant of FIII8-9-10, equivalent to the one used by Redick et al. (17), exhibit very similar activities.2

We suggest that the synergistic effect of FIII8 is in part mediated via its effect on the stabilization of the FIII9 domain. The equilibrium denaturation studies designed to test this hypothesis show that although the FIII8-9 pair unfolds co-operatively, the mutual increase in the stability of both domains is equivalent to the increase in stability conferred upon FIII9 by FIII10 in the FIII9-10 domain pair. Thus FIII8 clearly produces an increase in the stability of FIII9 and vice versa.

The C-C' loop of FIII8 contains the motif VKNEED, which resembles the sequence REDV, a known FN adhesion recognition motif (27). In comparison with wild-type FIII8-9-10, the FIII8-9-10 mutants [mVKN] and [mEED] support lower functional activity in cell spreading assays, but not in ELISA, with the residues VKN appearing more sensitive to substitution than EED in functional assays. These results imply that the residues VKNEED are not recognized by the ligand binding site of alpha 5beta 1 per se but influence downstream, ligand-induced cellular responses. Our data further suggest a requirement for the integrity of the VKNEED sequence for the stability of the synergy site. The conformational stability of the wild-type and mutant FIII8-9-10 proteins is surprisingly different, even though the amino acid substitutions introduced were minor. This is highlighted by the comparison of the dependence of Delta G on GdnHCl concentration (m) for the FIII8-9-10 mutants (see Table II). Furthermore, loss of cell spreading activity of the mutants matches their respective loss of the stability of the FIII8-9 pair (Fig. 7C). Such long range effects of the VKNEED sequence, and possibly additional residues, on the stabilization of FIII9 thus provide a mechanism by which cell spreading activity may be modulated by FIII8.

The unfolding assays employed in this study do not necessarily reveal local structural deviance but give an indication of the overall foldedness of the proteins. As alanine-scanning mutagenesis is a commonly used approach to identify structural motifs that are important for function, the data we present here highlight the exigency for structural evaluation of mutant proteins in these types of studies and reinforce the possibility that amino acid substitutions may critically alter the global structural integrity of proteins. However, despite the correlation we observe between the stability, integrin binding capacity, and biological activity of the FIII8-9-10 mutants, our findings do not allow us to clearly uncouple the effects of domain destabilization from loss of direct contact sites with integrin alpha 5beta 1. We consider it likely that the PHSRN loop in FIII9 is involved both in direct integrin recognition and in conferring overall conformational stability to FIII9, and that the latter function is an important prerequisite for efficient alpha 5beta 1 binding and subsequent cell adhesion.

In conclusion, we have revealed a specific function for the FIII8 domain of FN in integrin alpha 5beta 1 recognition, high-affinity receptor binding and induction of downstream signaling, by elucidation of an indirect effect of FIII8 on the interaction of the CCBD with the alpha 5beta 1 integrin. The data presented provide a molecular basis for the previously reported enhancement of biological activity by FIII domains N-terminal to FIII9 (9, 10, 28). Our results demonstrate that amino acid sequences in addition to those described previously in FIII9 and FIII10 can contribute to integrin binding and induction of downstream signaling. Our observations support a model for alpha 5beta 1-FN interaction according to which the primary integrin recognition occurs via the RGD site in FIII10. We propose that secondary binding occurs via multiple, specific amino acid residues that can compensate for each other depending upon the availability and functionality of these sites within the FN molecule. Finally, our data reinforce the value of using multiple experimental approaches to determine accurately the specific functions of amino acid motifs in ligand-receptor interactions. The results of this study may have more widespread implications for multidomain ligand-receptor interactions and the identification of specific receptor recognition sites.

    ACKNOWLEDGEMENTS

We thank Janet Carver for invaluable technical expertise and Richard Grant for constructing the wild-type FIII8 and FIII8-9-10 proteins. We are extremely grateful to Caroline Damsky for the gift of the BIIG-2 clone and Fiona Watt for purified antibody.

    FOOTNOTES

* This work was supported by the Wellcome Trust and Medical Research Council.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Dagger Recipient of a Scatcherd European Scholarship, University of Oxford.

|| To whom correspondence should be addressed. Tel.: 44 1865 222936; Fax: 44 1865 769141; E-mail: hmardon@molbiol.ox.ac.uk.

Published, JBC Papers in Press, August 10, 2001, DOI 10.1074/jbc.M105868200

2 H. Mardon, unpublished observations.

    ABBREVIATIONS

The abbreviations used are: FN, fibronectin; BHK, baby hamster kidney; CCBD, central cell binding domain; DAPI, 4',6-diamidino-2-phenylindole; ECM, extracellular matrix; GST, glutathione S-transferase; GdnHCl, guanidine hydrochloride; BSA, bovine serum albumin; ELISA, enzyme-linked immunosorbent assay; FAK, focal adhesion kinase.

    REFERENCES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

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