![]()
|
|
||||||||
J. Biol. Chem., Vol. 276, Issue 46, 42965-42970, November 16, 2001
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
From the Department of Pathology and Laboratory Medicine, University of Cincinnati, Cincinnati, Ohio 45267-0529
Received for publication, July 10, 2001, and in revised form, September 12, 2001
| |
ABSTRACT |
|---|
|
|
|---|
Apolipoprotein A-I (apoA-I) is the
major protein associated with high density lipoprotein (HDL), and its
plasma levels have been correlated with protection against
atherosclerosis. Unfortunately, the structural basis of this phenomenon
is not fully understood. Over 25 years of study have produced two
general models of apoA-I structure in discoidal HDL complexes. The
"belt" model states that the amphipathic helices of apoA-I are
aligned perpendicular to the acyl chains of the lipid bilayer, whereas
the "picket fence" model argues that the helices are aligned
parallel with the acyl chains. To distinguish between the two models,
various single tryptophan mutants of apoA-I were analyzed in
reconstituted, discoidal HDL particles composed of phospholipids
containing nitroxide spin labels at various positions along the acyl
chain. We have previously used this technique to show that the
orientation of helix 4 of apoA-I is most consistent with the belt
model. In this study, we performed additional control experiments on
helix 4, and we extended the results by performing the same analysis on
the remaining 22-mer helices (helices 1, 2, 5, 6, 7, 8, and 10)
of human apoA-I. For each helix, two different mutants were produced
that each contained a probe Trp occurring two helical turns apart. In
the belt model, the two Trp residues in each helix should exhibit maximal quenching at the same nitroxide group position on the lipid
acyl chains. For the picket fence model, maximal quenching should occur
at two different levels in the bilayer. The results show that the
majority of the helices are in an orientation that is consistent with a
belt model, because most Trp residues localized to a position about 5 Å from the center of the bilayer. This study corroborates a belt
hypothesis for the majority of the helices of apoA-I in phospholipid discs.
Because of sedentary lifestyles and high fat diets,
atherosclerosis remains one of the leading causes of death in the
Western world. It has been demonstrated repeatedly that levels of high density lipoprotein (HDL)1
and its major protein constituent apolipoprotein A-I (apoA-I) are
inversely correlated with the incidence of heart disease (1). Apo-AI, a
28-kDa protein made up of 11- and 22-mer amphipathic helices (Ref. 2;
reviewed in Ref. 3), is critical to the formation and stability of the
HDL particle in circulation. The process of reverse cholesterol
transport is thought to remove excess cholesterol from extra-hepatic
tissues such as the arterial wall and return it to the liver for
processing (4, 5). ApoA-I performs many critical functions in this
pathway. In the lipid poor form, it can interact with the cell surface
under the control of the ATP-binding cassette A1 transporter (6).
Once apoA-I accumulates phospholipids and cholesterol from the
cell surface, it likely forms discoidal complexes that interact with
enzymes such as lecithin:cholesterol acetyl transferase and cholesterol ester transfer protein to form the spherical HDL particles commonly found in plasma. These are the particles that are thought to deliver cholesterol to the liver and steroidogenic tissues through interaction with scavenger receptor type B class I (7).
ApoA-I has a dynamic structure that allows it to perform its functions.
Numerous attempts have been made to determine the arrangement of the
amphipathic helices in nascent HDL discs, because this appears to be a
critical intermediate in reverse cholesterol transport. Early studies
including primary sequence analyses (8), dried film infrared
spectroscopy (9, 10), and particle geometry calculations (11) were
interpreted to be in support of a "picket fence" model in which the
helices of apoA-I are arranged parallel to the phospholipid bilayer.
Recent computer simulation studies have also supported this model
(12).
However, other computer models derived from a crystal structure of a
lipid free fragment of apoA-I suggest the possibility of a "belt"
model (13, 14). In this case, the helices of apoA-I are arranged
perpendicular to the phospholipid bilayer. Further support for this
model comes from a recent study that employed oriented polarized
internal reflection infrared spectroscopy (15) to show that, on
average, most of the helical regions are consistent with a belt
orientation in phospholipid discs.
Using a new approach that capitalized on the fluorescence of introduced
tryptophan residues and the quenching ability of nitroxide spin-labeled
phospholipids, our laboratory experimentally determined the orientation
of helix 4 in apoA-I (16). Two different positions were chosen in the
helix, one at the center (residue 108) and one near the C-terminal end
of the helix (residue 115), for making single Trp mutants of apoA-I.
Nitroxide labels on phospholipid acyl chains were placed at five
different depths in separate reconstituted HDL (rHDL) particles
containing each of these mutants. The depth of each Trp was determined
by a modification of the parallax analysis commonly used to study
membrane spanning proteins (17). In the belt model, the Trp residues in
both mutants would be maximally quenched at the same level in the
bilayer; in the picket fence model the Trp residues would be quenched
at different levels. We found that both Trp residues were maximally
quenched at the same level in the bilayer (about 5-6 Å from the
bilayer center) as predicted for a belt model (16). This was in direct
contrast to synthetic transmembrane peptides in which similarly placed Trp residues were measured in the expected picket fence orientation in vesicles.
In the current study, we report additional control experiments to
unambiguously show that helix 4 cannot be in a picket fence orientation
by studying additional points along the helix. We then used the same
approach to measure the orientation of all remaining 22-amino acid
helices in apoA-I. The results show that almost all of the helices
orient in some form of a belt-like model. This study identifies the
specific regions within the molecule that exist in the belt orientation
and lays the foundation for further work aimed at determining the
tertiary arrangement of apoA-I molecules on discoidal HDL particles.
Materials
1-palmitoyl, 2-oleoyl phosphatidylcholine (POPC), the nitroxide
spin probes 1-palmitoyl,
2-stearoyl(X-DOXYL)-sn-glycero-3-phosphocholine (where X = 5, 7, 10, 12, or 16), and 1-oleoyl,
2-(12-NBD)-sn-glycero-3-phosphocholine were purchased
from Avanti Polar Lipids (Birmingham, AL). The atomic phosphorus
standard was obtained from Sigma. IgA protease was obtained from
Mobitec (Marco Island, FL). All other reagents were of the highest
quality available.
Methods
Mutagenesis, Protein Expression, and Purification--
Human
proapoA-I cDNA in the pET30 (Novagen, Madison, WI) vector was used
to generate single Trp mutants. Each of the five naturally occurring
Trp residues (position
The resulting constructs were transfected into BL-21 (DE3)
Escherichia coli cells (Novagen). The overexpression of the
mutant apoA-I was performed using freshly transfected cells as
described previously (18). After harvesting, the cells were resuspended in 10 mM Tris buffer, pH 8.0, containing 0.15 M
NaCl, 1 mM EDTA, and 0.2% NaN3 (standard Tris
buffer). The cells were lysed for 20 min at room temperature using
B-PER lysis detergent (Pierce) at 4 ml of detergent solution for every
100 ml of bacterial cell culture. The soluble cell contents were
applied to a His-bind column (Novagen) and eluted according to the
manufacturer's instructions. The His-tagged proteins were dialyzed
into 10 mM ammonium bicarbonate buffer, pH 8.0, and
lyophilized. Lyophilized proteins were solubilized in 3 M
guanidine HCl and dialyzed into standard Tris buffer, and the His tag
was then removed by cleavage with 1:5000 (w:w) IgA protease at 37 °C
for 16 h. The His tag was removed by hydrophobic interaction
chromatography on a phenyl Sepharose HiTrap (Amersham Pharmacia
Biotech) column resulting in the final mature apoA-I protein. The
proteins prepared by this method were >95% pure as visualized by SDS
electrophoresis stained with Coomassie Blue, and the yields were about
3-5 mg of protein/100 ml of original culture.
Preparation and Characterization of the Lipid-containing
Particles--
rHDL particles were prepared as described previously
(20) using POPC, mutant apoA-I, and spin-labeled phospholipids. All phospholipid stock solutions were assayed before the reconstitution by
the phosphorus method of Sokolof and Rothblat (21). Initial lipid to
protein molar ratios were 85:15:1 (POPC:DOXYL-DSPC:apoA-I) to make 98 Å particles. For each mutant, a set of particles was reconstituted
without the spin-labeled phospholipids. Any unreacted protein and
vesicular structures were removed by gel filtration chromatography on a
Superdex 200 gel filtration column (Amersham Pharmacia Biotech) (22).
Previous studies have ensured that the gel filtration step did not
change the concentration of quencher within the particles (16). The
phosphorus assay and the Markwell modification of the Lowry protein
assay (23) determined the final lipid and protein concentrations.
Particle hydrodynamic diameters were measured by gradient native
polyacrylamide electrophoresis (PhastSystem; Amersham Pharmacia
Biotech) (22). The secondary structure content of the apoA-I in the
rHDL particles was estimated by circular dichroism at 222 nm (Jasco
J-720 spectropolarimeter) (24).
Fluorescence Spectroscopy--
All fluorescence measurements
were performed on a Photon Technology International Quantamaster
spectrometer in photon counting mode. The emission and excitation band
passes were 3.0 nm. The excitation wavelength for all Trp studies was
295 nm to minimize the contribution of tyrosine fluorescence in apoA-I.
The samples at 0.075 mg/ml in standard Tris buffer for all studies were
measured at 25 °C in a semi-micro quartz cuvette. The emission
spectra from 305 to 360 nm were corrected for the background
fluorescence of buffer alone.
Depth Calculations: Theory--
The parallax method for
determining the depth of penetration of a fluorophore into a lipid
bilayer was derived by Chattopadhyay and London (25) from classical
relationships of static quenchers to randomly distributed fluorophores.
The method depends on distance-dependent quenching. The
differences in fluorescence intensities of the fluorophore in the
presence of known concentrations of nitroxide quencher groups at known
locations in a phospholipid acyl chain are used to calculate the
relative depth of the fluorophore relative to the quenchers (see Ref.
16 for a detailed discussion of the method theory). The distance of the
Trp from the center of the bilayer (Zcf) is
given by the following equation.
The quenching pair of C-5 and C-12 was chosen for our calculations
because these two quenchers gave the largest difference in quenching in
previous studies. In addition, Abrams and London (17) have published
detailed information on the quenching of 12-NBD phospholipids
using the C-5/C-12 pair that allowed the calibration of our particular
batches of spin-labeled lipid to estimate Trp depths as accurately as
possible (16).
Experimental Design--
To determine the orientation of each
putative helix of apoA-I, we placed Trp residues at two positions
within each helix in separate mutants. ApoA-I has eight generally
accepted, 22-amino acid, amphipathic helices (helices 1, 2, 4, 5, 6, 7, 8, and 10). If one assigns the first residue of each helical repeat as
position 1 and the last as position 22, then positions 10 and 17 were
probed for each helix as in our preliminary study (16). The
"central" Trp at position 10 is expected to be about 1.5 Å from
the theoretical center of the helix (assuming the center to be
22/2 = 11 and 1.5 Å of distance per residue in an ideal helix).
The "distal" Trp at position 17 is two turns along the helix toward
the C terminus and theoretically about 9-10 Å from the helix center.
These positions have been selected because they are both in the center
of the helical hydrophobic face when one looks down the long helical axis and are more than 3 residues away from the extreme ends of the
helix. The latter point is important because if there are turn
sequences between the helices as predicted by the picket fence model,
then both of these positions should be far enough away from the ends so
as not to participate in the turns. Thus, we anticipated accurate depth
measurements for Trp residues at both positions, regardless of the
orientation of the helix with respect to the bilayer.
The Possibility of Helix Sliding--
Using this approach, we
previously demonstrated that both the central and distal Trp probes in
helix 4 of apoA-I were located about 5-6 Å from the center of the
bilayer, a result consistent with the belt model. However, the
possibility remained that our results could also be consistent with the
picket fence model if helix 4 can move upward with respect to the
bilayer. This would have the effect of pulling the central Trp away
from (and the distal Trp toward) the center of the bilayer with respect
to their original positions (Fig. 1). To
address this possibility, we constructed two additional mutants that
contained Trp residues at positions 3 and 6 in the helical nomenclature
(positions 101 and 104 in apoA-I). Although these two residues are
close to the N-terminal end of the helix, they are still situated on
the hydrophobic face and are 1 and 2 turns N-terminal to the central
Trp residue at position 108, respectively (Fig.
2). These two mutants exhibited levels of
expression and secondary structure characteristics similar to those of
the other mutants created for this particular helix. The fluorescence
intensity of each Trp residue in the absence of quencher was compared
in the presence of nitroxide-labeled phospholipids in rHDL particles.
Fig. 3 demonstrates that both mutants
were minimally quenched near the shallow quencher (position C-5) but
were increasingly quenched as the nitroxide group was moved deeper into
the bilayer. Table I shows that the depth
of both Trp residues was about 5-6 Å from the bilayer center,
essentially the same position as calculated for the 108 and 115 mutants. The observation of four separate points along the helix at a
similar bilayer depth can only be explained by a belt model, assuming that helix 4 is a contiguous helix. With this result established, we
generated mutants for the remaining helices in apoA-I at helical positions 10 and 17 and measured the relative bilayer depth of each
probe.
Generation and Characterization of Mutants in the Other 22-mer
Amphipathic Helices of apoA-I--
To limit the total number of
complexes generated in this study to a reasonable number, we produced
three complexes/mutant (one containing no nitroxide, DOXYL-5, and
DOXYL-12) rather than using all available nitroxide positions as in our
previous studies. These are sufficient for calculation of the depth
parameter (17). The initial particle reconstitution reaction conditions
were selected to produce primarily 98 Å particles with 90-100
molecules of phospholipid and three molecules of apoA-I/complex. This
type of particle was used because of its ease of reconstitution and
extreme stability in our hands versus those that contain two
molecules of apoA-I. Each particle was studied in triplicate from at
least two independent preparations of mutant protein. As in our
previous study, we expended significant effort to confirm that the
introduction of the probe residues did not have adverse effects on the
structure of the mutant particles relative to those made with the
native protein. We demonstrated that the presence of the nitroxide
labels in the rHDL particles did not affect the structure of the
associated protein or the size and morphology of the disc (16).
Similarly, in the current study, all mutants formed rHDL particles of
similar size (about 98 ± 4Å) as measured by native PAGE (Fig.
4) and exhibited similar retention times
on a calibrated Superdex 200 gel filtration column (data not shown). A
representative selection of these particles is shown in the native PAGE
gels in Fig. 4. It is clear that neither the introduction of the Trp
residues at various positions across the molecule nor the presence of
the spin labels at each position affected the diameter of the
particles. This was the case for all the mutants used in this study,
even for the relatively poorly conserved substitutions such as Ala
residues that were changed to Trp residues. We occasionally saw a
slight increase in diameter of rHDL particles generated with human
plasma apoA-I versus the recombinant form of the protein (on
the order of a 2-4 Å). However, this effect is inconsistent between
preparations and likely reflected differences in the nature of the
protein preparation rather than a significant structural difference
between the two types of apoA-I. All particles used were of similar
phospholipid to protein molar composition (averaging 96 ± 11:1)
to each other and to previously published particles generated with
human plasma apoA-I (11, 22), indicating that the Trp mutations do not
affect composition of the rHDL particles. Furthermore, the samples
selected at random exhibited no significant differences in overall
Table II lists the wavelengths of maximum
fluorescence ( The work reported here extends our previous findings by
demonstrating that our results for helix 4 were not attributable to movement of the helix across the plane of the bilayer edge in a picket
fence model. More importantly, the application of the Trp depth
strategy to all putative 22-amino acid repeats demonstrates that the
majority of the Trp residues in the helical regions in apoA-I are
present at the same level in the bilayer.
The Physiological Significance of apoA-I Helix Orientation in
Discoidal Complexes--
Discoidal HDL particles do not accumulate to
a significant degree in the plasma compartment of normal individuals.
Therefore, at first glance, the issue of whether apoA-I encapsulates a
discoidal patch of phospholipid in a belt or picket fence orientation
may be seen as little more than a trivial geometric problem. However, the recent discovery of the importance of the ABCA1 transporter (27-29) and its possible interaction with lipid-free apoA-I (30) has
focused much attention on the phenomenon of apolipoprotein-mediated phospholipid and cholesterol efflux. There is considerable evidence that an ABCA1 controlled pathway is responsible for the initial stages
of apoA-I lipidation, especially by phospholipid. By most accounts, the
maturation from lipid-free apoA-I to a mature spherical HDL particle
likely occurs through some form of discoidal intermediate. This
intermediate is short-lived because of the actions of lipoprotein remodeling enzymes such as lecithin:cholesterol acetyl transferase that
act quickly to convert nascent particles to more mature forms in
plasma, although this may occur more slowly in extravascular compartments where discoidal complexes are measurable (31, 32). In
Tangier disease patients, who lack functional ABCA1, there is an almost
complete absence of lipidated apoA-I in circulation (33). This strongly
suggests that apoA-I is initially secreted in a lipid-free form and
requires subsequent lipidation by ABCA1 to avoid premature clearance
from circulation. Thus, it can be argued that almost all HDL-associated
apoA-I in normal human plasma must have passed through a discoidal
intermediate at some point in its circulatory life cycle.
Given the importance of a discoidal intermediate, it follows that the
functional predictions derived from the picket fence or belt models
have profound physiological implications on apoA-I function and HDL
metabolism. Consider the example of a newly formed discoidal HDL
particle that contains two molecules of apoA-I. In the picket fence
model, a discrete interaction site for lecithin:cholesterol acetyl
transferase might be present entirely on each molecule of apoA-I
because each molecule forms a distinct face that covers roughly half
the circumference of the disc. Conversely, in the double belt model
proposed by Segrest et al. (14) each molecule stretches all
the way around the particle. In this case, it is more likely that the
lecithin:cholesterol acetyl transferase activation site on apoA-I is a
chimeric region that has elements present on both molecules of apoA-I.
A similar case can be made for interactions with cholesterol ester
transfer protein, receptors such as SR-B1, or perhaps even the ABCA1
transporter. Therefore, resolution of the structure of disc-bound
apoA-I will assist in the identification of these critical interaction
regions within apoA-I. This understanding will allow for more informed
mutagenesis strategies both in vitro and in mouse models to
elucidate the molecular details of reverse cholesterol transport.
Models of Apolipoprotein A-I Structure--
It is clear from Table
II that the Trp residues introduced in helices 2, 4, 5, 6, 7, and 8 closely fit the prediction for a belt model with each Trp between
position 60 and 229 averaging about 5.2 Å from the center of the
bilayer. We realize that because most of these helices were studied at
only two points/helix, one might argue that these helices may still
exist in a picket fence orientation in which the helices have slid up
and down the bilayer as depicted for helix 4 in Fig. 2. However, a
close study of the Phillips picket fence molecular model (12) reveals
that to arrange all 16 Trp residues between 60 and 229 at the same
depth in the bilayer, one has to accept two major deviations from
classical picket fence theory. First, this would require that the
helical turns would not be centered on proline residues. Second, it
would require the insertion of extended regions of nonhelicity in each putative helix to place the Trp residues in the correct locations. In
the absence of evidence for such significant departures from our
current understanding of apoA-I structure, we believe that a picket
fence organization is highly unlikely given our data and given that
expending the resources to study a third point in each helix would be counterproductive.
Interestingly, the central Trp in helix 1 and the distal Trp in helix
10 are the only two that appear to differ from the average depth
observed for the other 16 mutants. These two locations are at the
extreme ends of the region that we probed in this study. Thus, the
locations of both Trp residues in helices 1 and 10 do not strictly fit
the predictions of either the picket fence or belt models. An
underlying assumption required for distinguishing between the two
models in this study is that each helical segment exists as a rigid
helical rod. If this assumption holds for helices 1 and 10, then one
interpretation would be that both of these helices cross the bilayer at
an angle that is intermediate between those predicted for the belt and
picket fence models. This is not the first time that helices 1 and 10 have been observed to have distinguishing traits versus the
internal helices. Palgunachari et al. (34) have demonstrated
that these same helices exhibit the highest affinity for lipid and may
be involved in the initial events of apoA-I lipid binding. Thus, it is
possible that the unique orientation parameters that we observed are
related to differences in lipid penetration characteristics of these
two helices versus the others. Alternatively, the assumption
of a rigid helical rod may not hold in the case of every single helical segment in apoA-I. Indeed, taking the commonly measured value of about
70-75% helical content for apoA-I in particles of this composition,
about 61-73 of the 243 amino acids are predicted to exist in a
nonhelical conformation. Even if one assumes that the N-terminal 43 amino acids are predominantly nonhelical (35), there is still
significant potential for nonhelicity in the C-terminal 200 amino
acids. Thus, we feel that another likely explanation for our
observations is that the two end helices may deviate from the expected
helical rod and may exhibit an alternative structure (perhaps a random
coil or turn motif) near these locations that still allows the Trp
residues to interact with lipid. The unusual Trp depth measurement at
position 53 may reflect its proximity to the N-terminal 43 amino acids,
which have been suggested to exist in a globule-like organization (35).
Position 236 is only 7 residues away from the C terminus of the
molecule and might also be expected to differ in bilayer position than
the central region of the molecule.
The finding that the bulk of the molecule is in a belt-like orientation
is highly consistent with two recently reported models of apoA-I. The
double belt model of Segrest et al. (14) depicts two
molecules of apoA-I wrapping around each leaflet in an anti-parallel orientation. In this model, the structure is stabilized by salt bridge
interactions that occur intermolecularly between the two molecules. In
support of the double belt model, an analysis of natural mutations of
apoA-I showed that very few mutations were observed at the docking
interface between the two molecules and that the salt bridge pattern
seems to be highly conserved among mammals, birds, and fish (14). These
observations imply that an intact docking interface is critical for
apoA-I function. In addition, Li et al. (36) observed
evidence for rhodamine dimers in their recently reported FRET analysis
of apoA-I in rHDL. Because both labeled residues are situated in helix
5 (which are predicted to be in close opposition in the double belt
model), they interpreted the apparent close approach of these labels to
be in support of the double belt.
However, the double belt model is less satisfying when a third molecule
is introduced into the disc. Because molecules 1 and 2 occupy both
leaflets, molecule 3 must form some sort of a hairpin structure to be
accommodated on the disc edge. As of now, there is no definitive data
available that justifies such a drastic change in symmetry for the
third molecule. A second model initially suggested by Brouillette
et al. (3) predicts that all molecules on a given particle
are arranged in a hairpin orientation. In this model, about half of the
molecule is on one leaflet, there is a turn, and the other half
precedes anti-parallel to the first on the opposing leaflet. This model
is supported by FRET experiments performed by Tricerri et
al. (19) in which fluorescent acceptor and donor probes were
introduced at three positions throughout apoA-I. The distance
constraints generated were inconsistent with both the picket fence and
double belt models but supportive of the hairpin model in which there
was a random distribution of "head-to-tail" and "tail-to-head"
orientations. This model is attractive in that it preserves the
potential for stabilizing salt bridge interactions between the same
residues that were proposed for the double belt model, although these
would occur intramolecularly in the hairpin model. In addition, it
readily provides for the possibility of three molecules of apoA-I in a
discoidal complex in which all three are in a similar conformation. A
third model that is also consistent with our data is one that we have
termed the "Z" belt model. This arrangement is similar to the
hairpin idea except that instead of traversing back along itself, the molecule proceeds in the same direction on the opposing leaflet, giving
the potential for interlocking interactions between the molecules. This
model also allows for the presence of three molecules on a disc in
similar conformations and is the simplest model in terms of symmetry of
the apoA-I molecules on the disc edge.
Although our current approach was not capable of distinguishing between
these variations of the belt model, our results effectively rule out
models that include significant mixtures of the picket fence and belt
models. With the knowledge of the regions of apoA-I that are in a belt
orientation and the inherent constraints provided by the presence of
the protein on the disc edge, the number of possible tertiary models of
apoA-I on a disc has been dramatically reduced. In the absence of high
resolution structures of the particles from x-ray crystallography or
NMR, fluorescence energy transfer approaches appear to be the most
promising for distinguishing between the various belt models. The large
number of Trp mutants obtained for the current study will be useful in
such studies that measure energy transfer from the various single Trp
residues to fluorescent acceptor probes attached to introduced cysteine residues at specific locations on other apoA-I molecules on the same
disc. Such studies should provide numerous constraints required for
deriving a relatively high resolution model of apoA-I structure in
discoidal and spherical, HDL particles.
![]()
INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
![]()
EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
3 in the pro-segment and positions 8, 50, 72, and 108) in proapoA-I were converted to Phe using site-directed
mutagenesis (Stratagene, La Jolla, CA), yielding a mutant that
contained no Trp residues (W@
). The W@n nomenclature
states that a Trp residue has been introduced at position n.
We have previously demonstrated that these substitutions do not have
major effects on the structure or function of the protein (18). To
produce mutants of mature apoA-I that lacked the pro-segment, we added
an IgA protease cleavage site to our expression vector between the
pro-segment and the beginning of the mature
gene.2 A His tag was included
on the extreme N terminus of the construct. Cleavage of the expression
product at the IgA protease site removed the pro-segment and His tag,
leaving a Thr-Pro on the N terminus of the mature apoA-I protein.
W@
was used as a template to insert a Trp residue at a position in
the center of an amphipathic helix and, in a separate mutant, at a
residue distal to the center of the helix for each of the seven 22-mer
helices of apoA-I to be studied (helix 1: W@53,W@60; helix 2:
W@75,W@82; helix 5: W@130,W@137; helix 6: W@152,W@159; helix 7:
W@174,W@181; and helix 8: W@196,W@203; helix 10: W@229,W@236).
Two additional mutants were created in helix 4 at the far N-terminal
end (W@101 and W@104) for the described control experiments.
Polymerase chain reaction-based site-directed mutagenesis (QuickChange
mutagenesis kit; Stratagene, La Jolla, CA) was performed directly in
the pET30 expression vector. The sequences were verified on an Applied
Biotechnology System DNA sequencer, University of Cincinnati DNA core.
where Fs is the fluorescence intensity in
the presence of the shallow quencher, Fd is the
same for the deep quencher, Lcs is the distance
from the center of the bilayer to the shallow quencher,
Lds is the distance between the shallow and deep
quenchers, and C is the concentration of the quencher
molecules/Å2. Equation 1 holds when the Trp residue is
quenched by nitroxide groups shallow in the membrane. When the Trp is
buried deep within the membrane, it is subjected to quenching from
groups in the opposite side of the lipid bilayer. For this situation, a
second relationship is required to account for trans-bilayer quenching.
(Eq. 1)
where Fo is the fluorescence intensity in
the absence of quencher, Lcd is the distance
from the center of the bilayer to the deep quencher, and
Lds is the distance between the shallow and deep
quenchers. Equation 2 was used in this study whenever a Trp residue was
determined to be <5 Å from the center of the membrane by Equation 1.
(Eq. 2)
![]()
RESULTS
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

View larger version (25K):
[in a new window]
Fig. 1.
Alternative interpretation of Trp depth
results for helix 4 of apoA-I. This figure illustrates that the
Trp residues at position 10 and 17 in the 22-mer helical segment could
potentially show a quenching pattern consistent with the belt model
(both Trp residues quenched at similar levels in the bilayer) but
actually be in the picket fence conformation if the helix were shifted
4-5 Å across the bilayer. This has the effect of pulling the central
Trp away from its ideal picket fence location near the bilayer center
while pulling the distal Trp closer to the center. To rule out this
possibility, we performed quenching studies on two additional Trp
mutants in which the probe residue was located more N-terminal in the
22-mer helical segment (Fig. 2). The picket fence model shown on the
left is from Phillips et al. (12).

View larger version (77K):
[in a new window]
Fig. 2.
Relative positions of the introduced Trp
residues within helix 4 of apoA-I. The isolated helix 4 is taken
from the x-ray crystal structure published by Borhani et al.
(13). Two more N-terminal positions (101 and 104) in addition to the
original central and distal Trp residues are highlighted. Notice that
all four residues are aligned along the hydrophobic face of the
helix.

View larger version (14K):
[in a new window]
Fig. 3.
Nitroxide lipid quenching pattern for W@101
and W@104 mutants in 98 Å rHDL particles. The rHDL particles
were prepared with each mutant at a molar ratio of 85:15:1 mol:mol:mol
(POPC:DOXYL-X PSPC:apoA-I). The 98 Å size classes were purified by gel
filtration chromatography, characterized, and used for fluorescence
studies at concentrations of 75 µg of apoA-I/ml in standard Tris
buffer. The emission spectra were collected from 305-360 nm, and the
fluorescence intensity (F) for the DOXYL containing samples
at the
max was plotted as a ratio of the fluorescence of
the same particle without quenching groups present
(Fo). The excitation wavelength was 295 nm. The
labels near each data point indicate the carbon number of the
phospholipid acyl chain that contained the quenching group. The
X axis shows the distance of each DOXYL group from the
center of the membrane (C-5, 12.15 Å; C-7, 10.35 Å, C-10, 7.65 Å;
C-12, 5.85 Å, and C-16, 2.25 Å). Open circles, W@101;
filled circles, W@104.
Fluorescence characteristics of Trp mutants generated for helix 4 mutants in 98 Å reconstituted HDL particles
-helical contents from particles made with wild type protein as
determined by far UV circular dichroism (about 70-75% helicity) and
were consistent with previous studies of plasma apoA-I particles with
this composition. In general, we found that the single Trp
substitutions were well tolerated in apoA-I. This result is not
surprising because the Trp substitutions were usually quite
conservative and only occurred in hydrophobic areas of the molecule
that presumably interact with lipid and are not expected to participate
in protein-protein interactions in the lipid-bound protein.

View larger version (45K):
[in a new window]
Fig. 4.
Native PAGE analysis of a selection of rHDL
particles containing Trp mutants distributed across the entire apoA-I
molecule and spin labeled phospholipids at various carbon
positions. Both panels are 8-25% native PAGE gels run
side-by-side in the same electrophoresis run on a Phast electrophoresis
system stained with Coomassie Blue. 2.4 µg of protein were loaded for
each complex. All particles shown were of similar phospholipid to
protein molar composition (averaging 96 ± 11:1). All particles
exhibited calculated
-helical contents of between 70 and 75% as
determined by far UV circular dichroism. A, all samples in
this panel contain POPC only. Lane 1, low molecular weight
standards with corresponding hydrodynamic diameters (Amersham Pharmacia
Biotech; catalog number 17-0446-01); lane 2, human plasma
apoA-I rHDL; lane 3, W@60 rHDL; lane 4, W@82
rHDL; lane 5, W@156 rHDL; lane 6, W@196 rHDL.
B, all samples in this panel contained 15 mol % of a
nitroxide labeled phospholipid at the indicated carbon position.
Lane 1, W@130 rHDL (no nitroxide); lane 2,
W@130 rHDL (nitroxide position 5); lane 3, W@130 rHDL
(nitroxide position 12); lane 4, W@229 rHDL (no nitroxide);
lane 5, W@229 rHDL (nitroxide position 5); lane
6, W@229 rHDL (nitroxide position 12).
max) measured for each complex. All rHDL
particles exhibited blue-shifted
max values, which are
consistent with the Trp residues being involved in lipid contacts (26).
Interestingly, the
max values could be separated into
two populations with most of the mutants exhibiting a value of about
330 nm but with three residues in helices 8 and 10 averaging closer to
325. These regions may exhibit particularly tight association with
lipid versus the other regions. Table II also shows the
average depth measurement taken for each probe in each helical region.
It is clear that the great majority of the Trp probes were determined
to be about 5 Å from the center of the bilayer. The depths of all
probes averaged 5.0 ± 1.0 Å. Two exceptions from this pattern
were noted based on measured depth values that were more than one
standard deviation away from the mean of all samples. The Trps at
positions 53 and 236 exhibited values that were slightly closer to the
bilayer center than the others. In the absence of these two samples,
the remaining Trp residues averaged to a depth of 5.2 ± 0.6 Å from the bilayer center. There were some other Trp residues that were
below the average, but we routinely observe an experimental variation
of about 1 Å among similar samples. Thus, we considered differences
that are less than 1 Å to be due to experimental variation.
Fluorescence characteristics of Trp mutants generated for each putative
22-amino acid amphipathic helix in apoA-I in 98 Å reconstituted HDL
particles
![]()
DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
| |
ACKNOWLEDGEMENTS |
|---|
We thank Dr. Erwin R. London (State University of New York at Stony Brook) for providing control transmembrane peptides, calibration data and valuable advice and discussion concerning the adaptation of the parallax analysis to reconstituted particles. Finally, we congratulate Dr. Ana Jonas for remarkable scientific and educational accomplishments in the field of lipoprotein structural biology. We wish her the best of luck during her retirement.
| |
FOOTNOTES |
|---|
* This work was supported in part by Grant RO1 HL62542 from the NHLBI, National Institutes of Health (to W. S. D.).The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Established Investigator of the American Heart Association. To
whom correspondence should be addressed: Dept. of Pathology and
Laboratory Medicine, University of Cincinnati, 231 Albert Sabin Way,
Cincinnati, OH 45267-052. Tel.: 513-558-3707; Fax: 513-558-2289;
E-mail: Sean.Davidson@UC.edu.
Published, JBC Papers in Press, September 13, 2001, DOI 10.1074/jbc.M106462200
2 S. E. Panagotopulos, J. N. Maiorano, E. Horace, and W. S. Davidson, manuscript in preparation.
| |
ABBREVIATIONS |
|---|
The abbreviations used are: HDL, high density lipoprotein; rHDL, reconstituted HDL; apoA-I, apolipoprotein A-I; PAGE, polyacrylamide gel electrophoresis; POPC, 1-palmitoyl, 2-oleoyl phosphatidylcholine; W@n, a single Trp mutant containing Trp at amino acid position n with all other sites normally containing Trp converted to Phe; ABCA1, ATP-binding cassette A1; NBD, nitrobenzoxadiazole.
| |
REFERENCES |
|---|
|
|
|---|
| 1. | Schaefer, E. J., Lamon-Fava, S., Ordovas, J. M., Cohn, S. D., Schaefer, M. M., Castelli, W. P., and Wilson, P. W. (1994) J. Lipid Res. 35, 871-882[Abstract] |
| 2. | McLachlan, A. D. (1977) Nature 267, 465-466[CrossRef][Medline] [Order article via Infotrieve] |
| 3. | Brouillette, C. G., and Anantharamaiah, G. M. (1995) Biochim. Biophys. Acta 1256, 103-129[Medline] [Order article via Infotrieve] |
| 4. | Johnson, W. J., Mahlberg, F. H., Rothblat, G. H., and Phillips, M. C. (1991) Biochim. Biophys. Acta 1085, 273-298[Medline] [Order article via Infotrieve] |
| 5. | Glomset, J. A. (1968) J. Lipid Res. 9, 155-167[Abstract] |
| 6. | Lawn, R. M., Wade, D. P., Garvin, M. R., Wang, X., Schwartz, K., Porter, J. G., Seilhamer, J. J., Vaughan, A. M., and Oram, J. F. (1999) J. Clin. Invest. 104, R25-R31 |
| 7. | Acton, S., Rigotti, A., Landschulz, K. T., Xu, S., Hobbs, H. H., and Krieger, M. (1996) Science 271, 518-520[Abstract] |
| 8. |
Baker, H. N.,
Gotto, A. M. J.,
and Jackson, R. L.
(1975)
J. Biol. Chem.
250,
2725-2738 |
| 9. |
Wald, J. H.,
Coormaghtigh, E.,
De Meutter, J.,
Ruysschaert, J. M.,
and Jonas, A.
(1990)
J. Biol. Chem.
265,
20044-20050 |
| 10. | Brasseur, R., De Meutter, J., Vanloo, B., Goormaghtigh, E., Ruysschaert, J. M., and Rosseneu, M. (1990) Biochim. Biophys. Acta 1043, 245-252[Medline] [Order article via Infotrieve] |
| 11. |
Jonas, A.,
Kezdy, K. E.,
and Wald, J. H.
(1989)
J. Biol. Chem.
264,
4818-4824 |
| 12. |
Phillips, J. C.,
Wriggers, W.,
Li, Z.,
Jonas, A.,
and Schulten, K.
(1997)
Biophys. J..
73,
2337-2346 |
| 13. |
Borhani, D. W.,
Rogers, D. P.,
Engler, J. A.,
and Brouillette, C. G.
(1997)
Proc. Natl. Acad. Sci. U. S. A.
94,
12291-12296 |
| 14. |
Segrest, J. P.,
Jones, M. K.,
Klon, A. E.,
Sheldahl, C. J.,
Hellinger, M.,
De Loof, H.,
and Harvey, S. C.
(1999)
J. Biol. Chem.
274,
31755-31758 |
| 15. |
Koppaka, V.,
Silvestro, L.,
Engler, J. A.,
Brouillette, C. G.,
and Axelsen, P. H.
(1999)
J. Biol. Chem.
274,
14541-14544 |
| 16. |
Maiorano, J. N.,
and Davidson, W. S.
(2000)
J. Biol. Chem.
275,
17374-17380 |
| 17. | Abrams, F. S., and London, E. (1993) Biochemistry 32, 10826-10831[CrossRef][Medline] [Order article via Infotrieve] |
| 18. | Davidson, W. S., Arnvig-McGuire, K., Kennedy, A., Kosman, J., Hazlett, T. L., and Jonas, A. (1999) Biochemistry 38, 14387-14395[CrossRef][Medline] [Order article via Infotrieve] |
| 19. | Tricerri, M. A., Behling Agree, A. K., Sanchez, S. A., Bronski, J., and Jonas, A. (2001) Biochemistry 40, 5065-5074[CrossRef][Medline] [Order article via Infotrieve] |
| 20. | Jonas, A. (1986) Methods Enzymol. 128, 553-582[Medline] [Order article via Infotrieve] |
| 21. | Sokoloff, L., and Rothblat, G. H. (1974) Proc. Soc. Exp. Biol. Med. 146, 1166-1172[Medline] [Order article via Infotrieve] |
| 22. |
Davidson, W. S.,
Rodrigueza, W. V.,
Lund-Katz, S.,
Johnson, W. J.,
Rothblat, G. H.,
and Phillips, M. C.
(1995)
J. Biol. Chem.
270,
17106-17113 |
| 23. | Markwell, M. A., Haas, S. M., Bieber, L. L., and Tolbert, N. E. (1978) Anal. Biochem. 87, 206-210[CrossRef][Medline] [Order article via Infotrieve] |
| 24. |
Sparks, D. L.,
Lund-Katz, S.,
and Phillips, M. C.
(1992)
J. Biol. Chem.
267,
25839-25847 |
| 25. | Chattopadhyay, A., and London, E. (1987) Biochemistry 26, 39-45[CrossRef][Medline] [Order article via Infotrieve] |
| 26. | Burstein, E. A., Vedenkina, N. S., and Ivkova, M. N. (1973) Photochem. Photobiol. 18, 263-279[Medline] [Order article via Infotrieve] |
| 27. | Brooks-Wilson, A., Marcil, M., Clee, S. M., Zhang, L. H., Roomp, K., van Dam, M., Yu, L., Brewer, C., Collins, J. A., Molhuizen, H. O., Loubser, O., Ouelette, B. F., Fichter, K., Ashbourne-Excoffon, K. J., Sensen, C. W., Scherer, S., Mott, S., Denis, M., Martindale, D., Frohlich, J., Morgan, K., Koop, B., Pimstone, S., Kastelein, J. J., and Hayden, M. R. (1999) Nat. Genet. 22, 336-345[CrossRef][Medline] [Order article via Infotrieve] |
| 28. | Bodzioch, M., Orso, E., Klucken, J., Langmann, T., Bottcher, A., Diederich, W., Drobnik, W., Barlage, S., Buchler, C., Porsch-Ozcurumez, M., Kaminski, W. E., Hahmann, H. W., Oette, K., Rothe, G., Aslanidis, C., Lackner, K. J., and Schmitz, G. (1999) Nat. Genet. 22, 347-351[CrossRef][Medline] [Order article via Infotrieve] |
| 29. | Rust, S., Rosier, M., Funke, H., Real, J., Amoura, Z., Piette, J. C., Deleuze, J. F., Brewer, H. B., Duverger, N., Denefle, P., and Assmann, G. (1999) Nat. Genet. 22, 352-355[CrossRef][Medline] [Order article via Infotrieve] |
| 30. |
Oram, J. F.,
Lawn, R. M.,
Garvin, M. R.,
and Wade, D. P.
(2000)
J. Biol. Chem.
275,
34508-34511 |
| 31. | Wong, L., Curtiss, L. K., Huang, J., Mann, C. J., Maldonado, B., and Roheim, P. S. (1992) J. Clin. Invest. 90, 2370-2375 |
| 32. |
Roheim, P. S.,
Dory, L.,
Lefevre, M.,
and Sloop, C. H.
(1990)
Eur. Heart J.
11 (Suppl E),
225-229 |
| 33. | Schaefer, E. J., Zech, L. A., Schwartz, D. E., and Brewer, H. B. (1980) Ann. Intern. Med. 93, 261-266 |
| 34. |
Palgunachari, M. N.,
Mishra, V. K.,
Lund-Katz, S.,
Phillips, M. C.,
Adeyeye, S. O.,
Alluri, S.,
Anantharamaiah, G. M.,
and Segrest, J. P.
(1996)
Arterioscler. Thromb. Vasc. Biol.
16,
328-338 |
| 35. |
Nolte, R. T.,
and Atkinson, D.
(1992)
Biophys. J.
63,
1221-1239 |
| 36. |
Li, H.,
Lyles, D. S.,
Thomas, M. J.,
Pan, W.,
and Sorci-Thomas, M. G.
(2000)
J. Biol. Chem.
275,
37048-37054 |
This article has been cited by other articles:
![]() |
C. D. Blanchette, R. Law, W. H. Benner, J. B. Pesavento, J. A. Cappuccio, V. Walsworth, E. A. Kuhn, M. Corzett, B. A. Chromy, B. W. Segelke, et al. Quantifying size distributions of nanolipoprotein particles with single-particle analysis and molecular dynamic simulations J. Lipid Res., July 1, 2008; 49(7): 1420 - 1430. [Abstract] [Full Text] [PDF] |
||||
![]() |
W. S. Davidson and T. B. Thompson The Structure of Apolipoprotein A-I in High Density Lipoproteins J. Biol. Chem., August 3, 2007; 282(31): 22249 - 22253. [Full Text] [PDF] |
||||
![]() |
Y. Li, A. Z. Kijac, S. G. Sligar, and C. M. Rienstra Structural Analysis of Nanoscale Self-Assembled Discoidal Lipid Bilayers by Solid-State NMR Spectroscopy Biophys. J., November 15, 2006; 91(10): 3819 - 3828. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Bhat, M. G. Sorci-Thomas, E. T. Alexander, M. P. Samuel, and M. J. Thomas Intermolecular Contact between Globular N-terminal Fold and C-terminal Domain of ApoA-I Stabilizes Its Lipid-bound Conformation: STUDIES EMPLOYING CHEMICAL CROSS-LINKING AND MASS SPECTROMETRY J. Biol. Chem., September 23, 2005; 280(38): 33015 - 33025. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Saito, P. Dhanasekaran, D. Nguyen, E. Deridder, P. Holvoet, S. Lund-Katz, and M. C. Phillips {alpha}-Helix Formation Is Required for High Affinity Binding of Human Apolipoprotein A-I to Lipids J. Biol. Chem., May 14, 2004; 279(20): 20974 - 20981. [Abstract] [Full Text] [PDF] |
||||
![]() |
W. S. Davidson and G. M. Hilliard The Spatial Organization of Apolipoprotein A-I on the Edge of Discoidal High Density Lipoprotein Particles: A MASS SPECTROMETRY STUDY J. Biol. Chem., July 11, 2003; 278(29): 27199 - 27207. [Abstract] [Full Text] [PDF] |
||||
![]() |
H.-h. Li, D. S. Lyles, W. Pan, E. Alexander, M. J. Thomas, and M. G. Sorci-Thomas ApoA-I Structure on Discs and Spheres. VARIABLE HELIX REGISTRY AND CONFORMATIONAL STATES J. Biol. Chem., October 11, 2002; 277(42): 39093 - 39101. [Abstract] [Full Text] [PDF] |
||||
![]() |
D. Josse, C. Ebel, D. Stroebel, A. Fontaine, F. Borges, A. Echalier, D. Baud, F. Renault, M. le Maire, E. Chabrieres, et al. Oligomeric States of the Detergent-solubilized Human Serum Paraoxonase (PON1) J. Biol. Chem., August 30, 2002; 277(36): 33386 - 33397. [Abstract] [Full Text] [PDF] |
||||
| ||||||||||||||||||||||||