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J. Biol. Chem., Vol. 277, Issue 2, 1139-1147, January 11, 2002
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From the
Received for publication, July 24, 2001, and in revised form, October 26, 2001
Among the myogenic regulatory factors, myogenin
is a transcriptional activator situated at a crucial position for
terminal differentiation in muscle development. It is unclear at
present whether myogenin exhibits unique specificities to transactivate late muscular markers. During Xenopus development, the
accumulation of myogenin mRNA is restricted to secondary
myogenesis, at the onset of the appearance of adult isoforms of
The members of the MyoD gene family, including
myoD (1), myogenin (2), myf5 (3), and
MRF4 (4, 5), encode myogenic transcription factors
(MRFs)1 able to convert
non-muscle cells to a muscle phenotype in culture (6, 7). First
identified in mammals, all four proteins share a highly conserved
central region related to the basic helix-loop-helix domain of the
c-Myc superfamily. The MRFs are specifically expressed in skeletal
muscle, with non-identical patterns of expression (8), and form a
regulatory network controlling muscle determination and/or
differentiation. Experiments using various MRF knockout mice have
progressively elucidated the hierarchical relationships among the MRFs
and established that functional redundancy is a feature of the MRF
regulatory network. Thus, MyoD and Myf5 play overlapping roles in
myoblast specification, whereas myogenin and either MyoD or MRF4 are
required for differentiation (9). However, the redundant functions of
MyoD and MRF4 appear not to overlap with those of myogenin (10).
Knockout mice lacking the myogenin gene die at birth due to severe
muscle deficiency, despite normal levels of MyoD and Myf5 (11, 12).
Recent studies have shown that the role of myogenin in muscle formation
is distinct from that of MyoD and that this difference is due to
functional specialization, and not just regulation of expression (13,
14).
Surprisingly little is known about the identity of muscle genes that
are selectively activated by myogenin and that cannot be activated by
the other myogenic regulators. Indeed, all the MRFs can transactivate
muscle-specific gene expression by interacting with the consensus
nucleotide motif, CANNTG, also called the E box, and they are all
believed to bind to their target sequences as heterodimers with members
of the E-protein family (E12/E47). Several genes, including those
encoding muscle creatine kinase, myosin light chain 1/3, and
acetylcholine receptor subunits (15, 16), were shown to be activated by
MRFs. Although the MRFs showed different binding affinities for the
promoter sequences and different transactivation potential (17), the
concept of individual sets of genes each placed under the control of a
specific MRF has not been substantiated.
In this context, we wondered whether myogenin is able to transactivate
muscle structural genes that are not activated by the other MRFs. For
this question, early Xenopus embryos may provide a
convenient model. Xenopus homologs of MyoD (18, 19), Myf5 (20), and MRF4 (21) have been identified, and their temporal and
spatial expression patterns during early embryogenesis have been
analyzed (21, 22). In vitro and in vivo analysis
indicated that Xenopus Myf5 and MyoD transcripts can
induce a myogenic program following ectopic microinjection (18, 23,
24). Only a partial genomic clone of Xenopus myogenin
has been isolated (21); and more recently, we reported that, in
Xenopus, the accumulation of myogenin mRNA is restricted
to secondary myogenesis, including 1) muscle regeneration (25), 2) the
formation of new muscles in developing limbs, and 3) formation of new
dorsal muscles during body remodeling at metamorphosis (26). At the
onset of metamorphosis, the primary myotomal myofibers die and are
progressively replaced by secondary multinucleated myofibers arising
from fusion of recently migrated adult-type myoblasts. Interestingly,
these new myofibers express myogenin (26) as well as adult isoforms of
muscle contractile proteins, adult-type myosin heavy chain (MHC) and
In this report, we describe the cloning of two cDNA homologs of
myogenin in Xenopus. These two cDNAs, designated XmyogU1
and XmyogU2, code for proteins closely related to each other and are likely to be expressed from duplicated Xenopus myogenin
genes. We show that these two isoforms are differentially expressed
during development and muscle regeneration, suggesting a functional
difference. We found that, following ectopic expression and animal cap
assay in Xenopus embryos, XmyogU1 and XmyogU2 display
differential abilities to transactivate muscle structural genes.
Animals--
Xenopus laevis adults were maintained at
22 °C in tap water and fed once a week.
Muscle Injury and Sampling--
Animals were anesthetized with
tricaine methanesulfate (MS-222), and pure cardiotoxin from Naja
mossambica nigricollis venom (10 RACE/PCR--
Total RNA from a brachial muscle and a crural
muscle after 15 days of regeneration was prepared using the RNeasy kit
(QIAGEN Inc., Valencia, CA). 5'- and 3'-RACE adaptor-ligated,
oligo(dT)-primed cDNAs were prepared using the Marathon cDNA
amplification kit (CLONTECH, Palo Alto, CA). PCRs
were performed using the KlenTaq enzyme mixture
(CLONTECH). The oligonucleotide primers are
detailed in Table I. For cDNA cloning, PCR products were cloned
into the pGEM-T vector (Promega, Madison, WI). For Southern blot
analysis, the PCR products were separated on 1% alkaline agarose gels,
transferred onto Hybond-N nylon membrane (Amersham Biosciences, Inc.),
and hybridized overnight at 30 °C with 32P-labeled
15-mer primers and at 50 °C with 32P-labeled 20-mer
primers. The primers hU1, hU2, hU12, and h3 (see Table I), specific for
XmyogU1 cDNA, XmyogU2 cDNA, both sequences, and the 3'-end of
the long form of Xenopus myogenin transcripts, respectively,
were 32P-labeled at their 3'-ends by incorporation of
[32P]dCTP using terminal transferase (Invitrogen)
according to the manufacturer's recommendations. The blots were washed
twice at room temperature with buffer containing 2× SSC and 0.1% SDS
and once with 0.1× SSC and 0.1% SDS at room temperature for the blots probed with the 15-mer primers and at 50 °C for those probed with the 20-mer primers. Signals were detected by autoradiography.
Sequence Determination and Comparison--
Plasmids were
sequenced (Sequenase Version 2.0, Amersham Biosciences, Inc.) in both
directions by primer walking. The final sequence encoding the two
myogenin isoforms represents the consensus sequence from eight
overlapping cDNAs. The sequences were aligned at the DNA and
protein levels using the LALIGN program (28).
In Vitro Translation--
In vitro
transcription/translation reactions were completed using a TNT kit
(Promega) as specified by the manufacturer. For each reaction, 1 µg
of plasmid DNA was used in a 500-µl total reaction volume. A reaction
without addition of plasmid DNA was performed as a control. Reactions
were supplemented with translation-grade [35S]methionine
(PerkinElmer Life Sciences, Brussels, Belgium). Then, 10 µl of each
reaction was diluted at 50% in a loading dye and separated on a 10%
SDS-polyacrylamide gel. Radioactive components were detected by
fluorography, and protein bands were visualized by Coomassie Blue staining.
DNA Isolation and Southern Analysis--
Genomic Southern blots,
made essentially as described by Scales et al. (19), were
probed with a 480-bp (nucleotides 1-480) cDNA fragment from the
coding region of XmyogU2 labeled with 32P by a random
primer labeling technique (Amersham Biosciences, Inc.).
RNA Isolation and Northern Blot Analysis--
Total RNA was
isolated from different tissues of Xenopus as described by
Chomczynski and Sacchi (29). Embryos and larvae were staged according
to Nieuwkoop and Faber (30). Total RNA (40 µg/lane) was fractionated
on a glyoxal-agarose gel, transferred onto Hybond-N nylon membrane, and
hybridized overnight at 42 °C with random-primed
32P-labeled DNA probes in 50% formamide hybridization
solution (5× SSC, 5× Denhardt's solution, 0.2% SDS, and 100 µg/ml
denatured salmon sperm DNA). The probes were labeled PCR fragments from the XmyogU1 3'-region (930-bp fragment, nucleotides 440-1370), the
XmyogU2 coding region (485-bp fragment, nucleotides 15-500), and the
Xenopus MyoD 3'-region (nucleotides 661-1448) of
Xenopus MyoD-(2-24) (18). The blots were washed twice at
room temperature with 2× SSC and 0.1% SDS and twice at 55 °C with
buffer containing 0.1× SSC and 0.1% SDS. The same blots were finally
probed with a 32P-labeled primer that hybridized the 18 S
rRNA (5'-ACGGTATCTGATCGTCTTCGAACC-3') in hybridization solution (5×
SSC, 5× Denhardt's solution, 0.1% SDS, and 10 mM
phosphate buffer (pH 7)). The blots were washed as described above,
except that the second wash was performed at room temperature. Signals
were detected by autoradiography.
RT-PCR Analysis--
First-strand cDNAs were synthesized
from 1 µg of total RNAs by oligo(dT) priming using Superscript
reverse transcriptase (Invitrogen) at 37 °C for 1 h. PCR assays
were performed as described elsewhere (26). Controls for PCR and
hybridization were performed using plasmids carrying XmyogU1 and
XmyogU2 cDNAs as templates. Increasing concentration of control PCR
products (2, 4, and 8 ng) were analyzed as described above. When enzyme
digestion was performed to discriminate between XmyogU1 and XmyogU2,
StyI (New England Biolabs Inc.) was used to digest the PCR
fragments amplified with F1 and Ro (see Table I).
In Situ Hybridization--
A sample of the iliofibularis
muscle was removed from a Xenopus female adult. The tissue
was washed in water at room temperature and frozen in liquid nitrogen.
Sections 10 µm thick were cut in a cryostat at Succinate Dehydrogenase Histochemistry--
The succinate
dehydrogenase activity of 10-µm-thick cross-sections of the unfixed
part of the iliofibularis muscle was determined as described by Pool
et al. (31) to establish the oxidative capacity in
individual muscle fibers. Sections were incubated for 10 min at
37 °C in medium consisting of 0.4 mM nitro blue tetrazolium (Sigma) and 75 mM sodium succinate (Sigma) in
37.5 mM sodium phosphate buffer (pH 7.6). The staining
intensity obtained by this method correlates with the maximal rate of
oxygen consumption of single muscle fibers of X. laevis
(32).
Embryo Injection and Animal Cap Assay--
Xenopus
embryos were placed in 1× Niu-Twitty medium with 4% Ficoll and
injected bilaterally with mRNA at the two-cell embryo stage.
Injected embryos were transferred to 0.1× Niu-Twitty medium with antibiotics.
For expression in Xenopus embryos, the full-length XmyogU1
and XmyogU2 cDNA isoforms were subcloned by PCR (Pfu
polymerase, Promega) into the expression vector pSP64T. The clones
pSP64T-XMyoD, pSP64T-XMyf5, and pSP64T-XMRF4 have been described (20,
21, 23). Capped mRNAs were synthesized in vitro from
linearized plasmids (XbaI restriction enzyme, New England
Biolabs Inc.) using the SP6 Message Machine kit (Ambion Inc.).
Injections were performed using an oil-based microinjector (Nanoject,
Drummond Science Co.).
The animal cap assay was performed as described previously (20). Dorsal
marginal zone explants were dissected at the blastula stage (stage 10)
and cultured until sibling embryos reached stages 14-15. Total RNA was
extracted from five pooled animal caps. The expression of the
Xenopus cardiac RACE/PCR, cDNA Cloning, and Sequence Determination of Xenopus
Myogenin--
To obtain a full-length cDNA of myogenin in
Xenopus, 5'- and 3'-RACE reactions were performed using
regenerating muscle mRNAs and primers designed from the partial
genomic sequence of Xenopus myogenin (21) (Fig.
1A). During regeneration of
Xenopus skeletal muscle, the forming myotubes produce a
large amount of myogenic factors, including myogenin (25). Thus, total
RNA was extracted from brachial muscles at 15 days of regeneration and
a "Marathon cDNA" population was synthesized.
In the first round of 3'-RACE/PCR, Xenopus myogenin-specific
primer (S1) and an adaptor primer (AP1) yielded two PCR fragments of
680 and 920 bp in length that were cloned into pGEM-T and named XmyogU1
and XmyogU2, respectively. Sequencing confirmed that the two fragments
were 3'-extensions of Xenopus myogenin, including a
poly(A) tail. Comparison with the partial sequence of
Xenopus myogenin previously characterized (21) showed that
the sequence of XmyogU2 (680 bp) matched exactly the 3'-end of the
genomic clone of Xenopus myogenin, whereas the
sequence of XmyogU1 (920 bp) was only 97% similar to this sequence.
RACE fragments displayed 90% sequence homology to each other. These
data indicated also that the difference in size between the two RACE
fragments was due to an additional sequence of 240 bp at the 3'-end of
XmyogU1. Additional specific RT-PCR led us to isolate a long form of
XmyogU2 that contains a sequence of 240 bp at its 3'-end. The XmyogU2 sequence contains two consensus motifs for a poly(A) tail signal (5'-AATAAA-3') at positions 1054 and 1328, whereas the XmyogU1 sequence
contains only the second poly(A) tail signal at position 1349. These
results suggest the use of at least two different poly(A) tail signals
in XmyogU2, generating two transcripts with different
3'-ends.
Because these data strongly suggest that two different transcripts
related to myogenin are actually expressed in Xenopus
muscle, we decided to characterize the entire coding regions of both
XmyogU1 and XmyogU2. For this purpose, a second set of primers was
designed based on the 3'-end of each fragment (Fig. 1A) to
allow the specific amplification of XmyogU1 or XmyogU2. 5'-RACE/PCRs
were performed on the Marathon cDNA using the XmyogU1- and
XmyogU2-specific primers (rU1 and rU2, respectively) and the adaptor
primer (AP1). Sequence data showed that the resultant RACE fragments
were two isoforms of the 5'-coding region of Xenopus
myogenin cDNA. As expected, XmyogU2 displayed a 5'-region identical
to the genomic sequence of Xenopus myogenin
previously described (21).
To obtain reliable sequences, amplification of the entire cDNA was
performed with a Pfu polymerase. A set of fU1 and fU2
primers was designed based on the 5'-end of each 5'-RACE/PCR fragment and was used in combination with the 3'-reverse primers (rU1 and rU2).
This third round of RT-PCR generated fragments of 880 bp.
The two cDNAs (represented in Fig. 1B) are 1370 bp
(XmyogU1) and 1349 bp (XmyogU2) long (excluding the poly(A) tail).
Nucleic sequence alignment showed 90.7% identity between the two
Xenopus myogenins. The two putative coding sequences are
95.3% identical at the DNA level. In the 3'-untranslated region, the
two cDNAs are 84% identical.
Both the XmyogU1 and XmyogU2 cDNAs contain a unique open reading
frame, encoding predicted polypeptides of 235 and 236 amino acid
residues, respectively. The two myogenins potentially initiate at two
different start codons. The predicted sequences of these two
polypeptides are 95.3% identical. The amino acid differences are
distributed throughout the coding region, but are more numerous in the
N- and C-terminal regions. The helix-loop-helix region is conserved completely.
In Vitro Translation of XmyogU1 and XmyogU2--
XmyogU1 and
XmyogU2 display sequence differences in the 5'-region that predominate
around the initiation site of translation. To demonstrate the ability
of the two cDNAs to encode proteins, the pGEM-T plasmids containing
the complete coding sequence and the 5'-flanking region of each
myogenin cDNA (nucleotides 1-880) were used in a coupled in
vitro transcription/translation system to make
[35S]methionine-labeled translation products. Fig.
1C shows the separation of in vitro translation
products by SDS-PAGE. Each cDNA generated a single product with an
apparent molecular mass of 40 kDa. The difference between the
molecular mass of 25 kDa predicted from the coding sequence and the
estimated mass of 40 kDa seen after translation has already been
observed for in vitro synthesized myogenin in the mouse
(36).
Evidence for Distinct Genes--
Several pieces of evidence
suggest that XmyogU1 and XmyogU2 are encoded by distinct genes. First,
X. laevis contains a pseudotetraploid genome (37), making
genomic duplication a likely mechanism for producing the two myogenin
messengers. Second, the differences between the two sequences are
widely scattered throughout the sequence, including the coding
sequence. Third, probing a genomic Southern blot with a cDNA
expected to hybridize with both sequences consistently produced at
least two bands (Fig. 2). Three
hybridizing bands of unequal size were detected after digestion with
PstI, which cut once within the XmyogU1 coding region. Taken
together, our results suggest that these two transcripts are very
likely to be the products of different genes.
Muscle-restricted Expression of the Two Myogenin Genes--
The
expression of myogenin mRNAs in Xenopus tissues was
investigated by Northern blotting. Total RNA was extracted from
multiple adult tissues, including adult muscles and different stages of regeneration of the brachial and crural muscles. The Northern blots
were probed with the 3'-region (930-bp fragment, nucleotides 440-1370)
of the XmyogU1 cDNA. Reprobing the blots with the entire coding
region gave the same results (data not shown).
Three patterns of hybridization signals were observed for myogenin
expression: two RNA populations, only one RNA population, or no
myogenin mRNA. In the brachial muscle, although no hybridization signal was observed in normal adult muscle (data not shown; see Ref.
26), two mRNAs of ~1.3 and 1.5 kb were detected during muscle
regeneration (Fig. 3A). The
levels of expression of these two messengers were similar. In the
crural muscle, only the 1.3-kb mRNA was clearly detected in the
regenerating muscle, although two transcripts of 1.3 and 1.5 kb were
found in the adult muscle (Fig. 3B). The levels of
expression of the two myogenin mRNAs were lower in normal adult
muscles than during regeneration. Finally, no hybridization signal was
detected in tissues other than skeletal muscles, including the heart
(data not shown).
Identification of the Two mRNA Species of Myogenin--
To
determine which of the mRNAs detected by Northern blot analysis
corresponds to XmyogU1 and which to XmyogU2, we
performed 3'-RACE experiments. Total RNA were extracted from a brachial muscle and a crural muscle, both after 15 days of regeneration, and
Marathon cDNA populations were synthesized. 3'-RACE/PCR was performed on each Marathon cDNA using S1 and the adaptor primer (AP1). The resulting Southern blots were probed with the radiolabeled primers hU1, hU2, hU12, and h3 (Table I),
which hybridized with XmyogU1, XmyogU2, both sequences, and the 240-bp
3'-extension of the longest myogenin transcripts, respectively (Fig.
4A). The hybridization data
clearly showed different patterns of expression for the two myogenin
isoforms. Although strongly expressed during regeneration of the
brachial muscle, XmyogU1 was faintly detected during regeneration of
the crural muscle. In contrast, XmyogU2 displayed similarly strong
levels of expression during regeneration of both muscles. A faint
hybridization signal corresponding to the long isoform of XmyogU2 was
also detected in the brachial muscle, but not in the crural muscle. No
short form of XmyogU1 was detected.
Comparison of these data with those obtained by Northern blot analysis
permitted us to identify the transcripts encoded by the XmyogU1 and
XmyogU2 genes. The larger RNA was composed of XmyogU1 plus a minor
population of XmyogU2, and the smaller RNA was composed only of
XmyogU2. It was noted that the difference in size corresponded to the
difference between the sequences of the 3'-noncoding ends. This
result suggests that at least two different poly(A) tail signals are
used in vivo for XmyogU2, generating two
different 3'-ends depending on the muscle, and that only one poly(A)
tail signal is used for XmyogU1. These results indicate that
a specific control governs the expression of each myogenin gene
according to the muscle type.
Expression of the Two Myogenin Genes during
Development--
Because these data substantiate the hypothesis of a
dynamic pattern of expression specific to each myogenin gene, we
investigated by RT-PCR whether XmyogU1 and
XmyogU2 are differentially induced during development. The
results shown in Fig. 4B reveal different patterns of
expression for the two genes. During development, XmyogU1 was not
expressed, whereas XmyogU2 displayed a biphasic pattern of expression.
It was possible to detect a progressive increase in the XmyogU2
transcription level from stages 51 to 56 at the onset of myoblast
fusion. After stage 56, XmyogU2 expression decreased, and after stage
60, a faint XmyogU1 signal was observed. These data suggest that the
two myogenin genes are differentially expressed, with one isoform
(XmyogU2) expressed during development and in the adult and the other
isoform (XmyogU1) expressed only in adult muscles.
Restricted Expression of Myogenin in Oxidative Myofibers of Adult
Muscles--
To determine the pattern of expression of each
Xenopus myogenin isoform in adult muscles, RT-PCR and
in situ hybridizations were performed using adult muscles,
including cruralis, gluteus maximus, adductor brevis,
semimembranosus, iliofibularis, tibialis anterior, tibialis posterior,
gastrocnemius, and sartorius. The two myogenin mRNAs were detected
in all adult muscles studied, as evidenced by the results of
RT-PCR/restriction enzyme digestion experiments that discriminated
between XmyogU1 and the XmyogU2 expression (Fig. 4C). Our
data provide evidence for the persistent expression of
Xenopus myogenin mRNA in many Xenopus adult muscles.
To determine in which type of myofibers myogenin mRNA is expressed,
in situ hybridizations were performed in a
Xenopus adult muscle. We chose to analyze iliofibularis
muscle, the most widely studied muscle in the frog. Diameter
determination and succinate dehydrogenase activity allowed us to
identify the five different fiber types, referred to as types 1-5
(38). Histochemical and functional studies clearly indicated that type
1-3 fibers are fast twitch fibers, whereas type 5 fibers are slow
tonic fibers; yet classification of type 4 fibers in the fast or slow
group remains a matter of speculation (38). We showed here that the small fibers with the lowest succinate dehydrogenase activity (type 5 fibers) and the large fibers with low succinate dehydrogenase activity
(type 1 fibers) did not react with myogenin cRNA probes (Fig.
5). In contrast, the three types of
myofibers characterized by high succinate dehydrogenase activity (type
2-4 fibers) strongly expressed myogenin mRNA, with the small type
3 fibers with the higher succinate dehydrogenase activity being the
myofibers expressing the higher levels of myogenin transcripts. These
results show that only oxidative myofibers express myogenin mRNA in
Xenopus adult muscles.
XmyogU1 and XmyogU2 Differ in Their Abilities to Activate the MHC
Adult Isoform--
We used the Xenopus animal cap assay to
compare the specificity of each MRF for the transactivation of muscle
structural genes. In this assay, synthetic
Xenopus MyoD, Myf5, MRF4, XmyogU1, XmyogU2, or
elongation factor-1
The cardiac
We then examined transactivation of the adult isoforms of MHC and
A clue to the mechanism of the transcriptional activity of
myogenic factors was provided by the evidence of conserved structural domains, the basic helix-loop-helix domain, responsible for
dimerization and DNA binding (39, 40), and specific domains that play
important roles in dictating the unique specificities of each factor in the activation of specific sets of genes (41) such as the
Pbx-Meis/Prep1 domain (42) and the helix III domain (14) in myogenin
(Fig. 7). Alignment of the
Xenopus sequences with chick, Cyprinus
carpio, rat, and human myogenins revealed additional
conserved domains that are candidate regions for specific
transactivation. A tryptophan residue (Trp186) is actually
conserved in all six proteins, within a region that also exhibits a
remarkable homology between the Xenopus and other species
sequences. Of note, within the conserved Pbx-Meis/Prep1 motif in
myogenin, cooperative interactions were reported to be mediated by an
essential Trp residue (42). Xenopus myogenins also present a
serine-rich domain (between residues 170 and 180) within the C-terminal
region that is highly conserved among species. Interestingly, Pelpel
et al. (43) have recently pointed out a serine residue in
this transactivation domain as a potential target for phosphorylation
by a protein kinase of the Mos family. In the myogenic factor MyoD,
phosphorylation of Ser237 by Mos regulates the activity of
MyoD during the course of muscle differentiation (43). In fact, several
studies emphasize the role of phosphorylation of serine/threonine-rich
sites in regulating the transcriptional activity of myogenin
heterodimeric complexes (44, 45). One striking example of such a
regulation is the protein kinase C-dependent inhibition of
myogenin activity that involves the direct phosphorylation of a
conserved threonine residue located within the basic domain of the
protein (46). It will be of interest to determine whether the
C-terminal serine-rich region of Xenopus myogenin is a
target for phosphorylation of the protein that might affect its
transcriptional activity.
The two forms of myogenin in X. laevis show remarkable
similarity in size and sequence, but the position, nature, and
clustering of the amino acid differences between XmyogU1 and XmyogU2
may account for functional specificity. Notably, substitutions
involving proline at positions 12 (Ser for Pro) and 229 (Pro for Thr)
are concentrated at both extremities of the proteins in the
transactivation domains (41). Prolines have the capacity to twist the
shape of the protein away from a helical configuration or out of a
Searching for expression of XmyogU1 and XmyogU2
in different contexts, including development, muscle regeneration, and
adult muscles, has provided evidence for differential expression of the
two Xenopus myogenin genes. The expression patterns of
Xenopus myogenin were complicated by the structural
heterogeneity of XmyogU2, which presents two different 3'-ends.
Interestingly, this structural heterogeneity is dependent on the
muscle. Because the structure of the mRNA 3'-end is thought to play
a role in determining the half-life of the molecule, it will be of
interest to investigate the functional significance of this phenomenon.
At the cellular level, the restricted accumulation of
Xenopus myogenin mRNA in muscle cells that present a
predominantly oxidative metabolism shows an expression profile expected
of a protein that is part of the phenotype maintenance of these cells.
This hypothesis is substantiated by the fact that myogenin can induce a
shift from glycolytic to oxidative metabolism in muscle fibers in which it is overexpressed (47). These observations led to the concept that
myogenin may play two different roles depending on the differential status of the cells in which it was activated, the terminal
differentiation of myoblasts during myogenesis, and the control of
oxidative metabolism in fully differentiated myofibers.
For all that is known about MRF gene expression patterns, structural
features of the proteins, and post-translational modifications, several
important issues remain unanswered regarding our understanding of how
the MRFs function. Different molecular mechanisms could account for the
functional specification of the MRFs and explain their implication in
myoblast determination and/or in myotube terminal differentiation.
First, it may be that each MRF targets a specific array of genes with a
high degree of specificity. This model accounts for the spatial,
temporal, and quantitative pattern of expression specific for each MRF
and the fact that, as evidenced by the myogenin Thus, in this study, we have shown that the expression of
embryonic/larval MHC and These results also provide evidence for an alternative pathway in the
activation of MHC and A better knowledge of the MRF target genes is an important issue
for understanding the orchestration of gene expression in the myogenic
cascade. Future work will address the mode of myogenin gene regulation
and its functional significance in the process of myogenesis.
Functional analysis of the two myogenin genes in Xenopus is
likely to provide important insights into the regulation and
physiological roles of this MRF in muscle.
We thank Dr. J. B. Gurdon for
Xenopus MyoD, Myf5, and cardiac *
This work was supported in part by grants from the
Association Française contre les Myopathies.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
The nucleotide sequence(s) reported in this paper has been submitted to the GenBankTM/EBI Data Bank with accession number(s) AY046531 and AY046532.
§
Both authors contributed equally to this work.
¶
Recipient of a doctoral fellowship from the Ministère de
l'Education Nationale, de la Recherche, et de la Technologie.
**
To whom correspondence should be addressed. Tel.:
33-1-4286-2153 Fax: 33-1-4286-2119; E-mail:
chanoine@biomedicale.univ-paris5.fr.
Published, JBC Papers in Press, October 29, 2001, DOI 10.1074/jbc.M107018200
The abbreviations used are:
MRFs, myogenic
regulatory factors;
MHC, myosin heavy chain;
Two Myogenin-related Genes Are Differentially Expressed in
Xenopus laevis Myogenesis and Differ in Their Ability to
Transactivate Muscle Structural Genes*
§,
§,
¶,
,
,
,
, and
**
Laboratoire de Biologie du
Développement et de la Différenciation Musculaire (EA
2507), Centre Universitaire des Saints-Pères, Université
René Descartes, F-75270 Paris Cedex 06, France and the
Laboratory for Physiology, Vrije Universiteit,
1081 BT Amsterdam, The Netherlands
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-tropomyosin and myosin heavy chain. To determine the role of
myogenin in the isoform switch of these contractile proteins, we
characterized and directly compared the functional properties of
myogenin with other myogenic regulatory factors in Xenopus
embryos. Two distinct cDNAs related to myogenin, XmyogU1 and
XmyogU2, were differentially expressed during myogenesis and in adult
tissues, in which they preferentially accumulated in oxidative
myofibers. Animal cap assays in Xenopus embryos revealed
that myogenin, but not the other myogenic regulatory factors, induced
expression of embryonic/larval isoforms of the
-tropomyosin and
myosin heavy chain genes. Only XmyogU1 induced expression of the adult
fast isoform of the myosin heavy chain gene. This is the first
demonstration of a specific transactivation of one set of muscle
structural genes by myogenin.
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INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
-tropomyosin (
-TM) (26, 27), making Xenopus highly
suitable for establishing the basis for myogenin's specific function
in the differentiation of skeletal muscle.
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EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
5 M in
0.9% NaCl; Latoxan, Rosans, France) was injected into the right
anterior brachial muscle of the fore limb and into the right posterior
crural muscle of the hind limb as described by Nicolas et
al. (25).
22 °C, collected
on slides treated with Vectabond (Vector Laboratories, Inc.,
Burlingame, CA), air-dried for 10 min at room temperatures, and stored
at
80 °C until used. Xenopus myogenin template is the
522-nucleotide fragment corresponding to the partial genomic DNA
sequence isolated by Jennings (21), subcloned into pGEM4Z (Promega),
linearized with HindIII (Roche Molecular Biochemicals), and
transcribed using SP6 RNA polymerase (Promega). cRNA probes were used
as described by Nicolas et al. (25).
-actin (33), MHC E3 (embryonic/larval MHC), MHC A7 (adult fast MHC) (34), and
-tropomyosin
(embryonic/larval and adult
-TMs) (35) genes was detected by RT-PCR.
[32P]dCTP (1 µCi) was added to each PCR sample, and the
PCR products were resolved electrophoretically on a 10% acrylamide
gel. The expression of ornithine decarboxylase was first examined as a control for equal amplification of cDNAs. The primers used for RT-PCR were 5'-GTCAATGATGGAGTGTATGGATC-3' and
5'-GTGCTCAGGAGAGCGGAATGGA-3' (ornithine decarboxylase),
5'-AGGACCTGGTGGACAAACTTCA-3' and 5'-TATTGGAGGCAAGAAAGAGTCTGAAG-3' (MHC
E3), 5'-AGGACCTGGTGGACAAACTTCA-3' and 5'-GGTTACCAAGATTGTGAAGAGT-3' (MHC
A7), 5'-TGGAGATGGCGGAGAAGAAG-3' and 5'-GCAGCAAGTGGCAGTCACGA-3' (embryonic/larval
-TM), 5'-TGGAGATGGCGGAGAAGAAG-3' and
5'-CCCCTTATCCATGCTATCGG-3' (adult
-TM), and
5'-TCCCTGTACGCTTCTGGTCGTA-3' and 5'-TATGTGGCTTTGGACTTTGAGA-3' (Xenopus cardiac
-actin).
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RESULTS
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

View larger version (78K):
[in a new window]
Fig. 1.
A, cloning strategy for
Xenopus myogenin cDNAs. RT-PCR and RACE fragments are
shown with the oligonucleotide pairs used. The genomic segment
represents the sequence cloned by Jennings (21). The full-length
sequence of Xenopus myogenin is shown, and the basic
helix-loop-helix region (bHLH) is boxed. The
scale bar is given in kilobases. B, nucleotide
alignment of Xenopus myogenin cDNAs. The XmyogU1 and
XmyogU2 cDNAs are 1370 and 1349 bp long, respectively, and contain
a single open reading frame. Initiation and stop codons are
underlined. The poly(A) tail signals are in
boldface. The shortest form of XmyogU2 ends at nucleotide
1098 (excluding the poly(A) tail). Identical nucleotides are indicated
by dots. Dashes represent gaps introduced for
optimal sequence alignment. The sequences were aligned using the LALIGN
software (28). C, in vitro translation of XmyogU1
and XmyogU2 cDNAs. Proteins were synthesized in a reticulocyte
lysate system using [35S]methionine as a labeled
precursor with plasmid cDNA corresponding to XmyogU1 or XmyogU2 and
no added cDNA (U1, U2, and C,
respectively). Translation products were analyzed by SDS-PAGE. Protein
molecular mass markers are indicated in kilodaltons.

View larger version (33K):
[in a new window]
Fig. 2.
Southern blot analysis of Xenopus
genomic DNA. Genomic DNA was isolated from liver and
digested with the following restriction enzymes. Lane 1,
AvaII; lane 2, EcoRI; lane
3, HindIII; lane 4, PstI. After
transfer, the blot was hybridized with a radiolabeled DNA probe that
anneals with the coding region (nucleotides 1-480) of the two myogenin
genes. At least two bands were detected in each lane. The sizes of DNA
markers are indicated in kilobases.

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[in a new window]
Fig. 3.
Northern analysis of myogenin mRNA.
A, during brachial (bra) and crural
(cru) muscle regenerations; B, during crural
(cru) muscle regeneration. Total RNA extracted from
different days of muscle regeneration (indicated at the top of each
panel) was loaded (40 µg on each lane) and tested by Northern
blotting for the presence of Xenopus myogenin
(Xmyog) and MyoD (XMyoD). Arrows
indicate the Xenopus myogenin hybridization signals
(estimated to 1500 and 1300 nucleotides on the basis of the relative
migration of the 18 S and 28 S rRNAs, respectively; not shown
on the autoradiogram). The 18 S rRNA was hybridized also to serve as an
internal standard control.
Primers used for PCR and Southern blot experiments

View larger version (36K):
[in a new window]
Fig. 4.
A, identification of each myogenin
mRNA population by 3'-RACE. Total RNA was extracted from
regenerating (15 days after injury) brachial (bra) and
crural (cru) muscles. RNA (0.4 µg) was
reverse-transcribed. A cDNA aliquot was used for 3'-RACE
nonselective amplification of the 3'-end of any Xenopus
myogenin gene. B, expression of myogenin genes during
Xenopus muscle development. Total RNA samples (0.4 µg)
from dorsal muscles of Xenopus larvae and skeletal
adult muscles were used to generate first-strand cDNA. The
numbers refer to the developmental stages. Myogenin
sequences were amplified using the S1/R1 primers, aiming for the
non-selective amplification of XmyogU1 and XmyogU2 cDNAs.
C, adult expression study. Lane 1, tibialis
anterior; lane 2, adductor brevis dorsalis;
lane 3, tibialis posterior; lane 4,
semimembranosus; lane 5, iliofibularis; lane 6,
gluteus maximus; lane 7, cruralis; lane 8,
gastrocnemius; lane 9, sartorius. Additional tests were
performed with regenerating crural (cru) and brachial
(bra) muscles at 15 days of regeneration and with dorsal
muscle at developmental stage 56 (st56). Myogenin sequences
were amplified using the F1/Ro primers, aiming for the indiscriminate
amplification of XmyogU1 and XmyogU2 cDNAs. The PCR products were
digested with StyI, allowing for selective discrimination
between XmyogU1 (lower bands) and XmyogU2 (upper
bands). In all cases, the PCR experimental conditions were
designed to avoid the saturation of PCR. In A and
B, the PCR products were submitted to Southern blot
detection of each Xenopus myogenin transcript with primers
hU1, hU2, and hU12, specific to XmyogU1 (U1), XmyogU2
(U2), and both sequences (U1+U2), respectively.
The h3 primer was specific to the 3'-end sequence of long
Xenopus myogenin transcripts (3'). Increasing
concentrations (2, 4, and 8 ng) of XmyogU1 and XmyogU2 plasmid PCR
products were used to check the hybridization reaction specificity
(CU1 and CU2). In the adult study (C),
the Southern blot was hybridized with radiolabeled S1 primer. Because
the PCRs were not performed under the same conditions, no relevant
comparison could be drawn on the basis of the hybridization signal
intensity between adult muscle and/or regenerating or developing
muscle.

View larger version (191K):
[in a new window]
Fig. 5.
Myogenin mRNA localization in adult
iliofibularis muscle. In situ hybridization using
antisense riboprobes to Xenopus myogenin (A and
C) and succinate dehydrogenase histochemistry (B
and D) were carried out on serial transverse sections.
Dark-field photomicrographs are shown (A and C).
Using sense riboprobes, we did not detect hybridization signals (data
not shown). Numbers identify the five different fiber types,
referred to as types 1-5 (38).
mRNA was bilaterally injected into
the animal pole of two-cell stage embryos. At the blastula stage,
animal poles were dissected and cultured until the late gastrula stage
for molecular analysis. Normally, cultured animal pole explants form
epidermis, but they can be converted to other cell fates following
injection of appropriate differentiation factors. We chose to analyze
animal caps by RT-PCR for the differential expression of the
Xenopus cardiac
-actin gene, the first muscle marker (8),
and for the differential expression of two isoforms of muscle
structural genes, the embryonic/larval and adult isoforms of the MHC
(34) and
-TM (35) genes.
-actin gene was found to be activated in all the animal
caps, except in the Xenopus elongation factor-1
control (Fig. 6). This result is
consistent with data previously obtained with Xenopus MyoD
and Myf5 (20). We examined the expression of embryonic/larval isoforms
of MHC and
-TM and found that both were activated by
Xenopus myogenin, but not by Xenopus MyoD, Myf5, or MRF4.

View larger version (61K):
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Fig. 6.
Transactivation specificities of the
Xenopus myogenin isoforms revealed in animal cap
assays. Synthetic Xenopus MyoD (XMyoD), Myf5
(XMyf5), MRF4 (XMRF4), XmyogU1, XmyogU2, or
elongation factor-1
(XEF1
) mRNA (2-3 ng)
was bilaterally injected into the animal pole of two-cell stage
embryos. The PCR conditions for each animal cap cDNA were
designed to avoid PCR saturation and to enable semiquantitative
determination. PCR was first performed with ornithine decarboxylase
(ODC)-specific primers to standardize the reaction. Radiolabeled RT-PCR
results with Xenopus cardiac
-actin
(X
Actin)-, embryonic/larval
-TM
(Emb
-TM)-, MHC E3-, and MHC A7-specific primers are
shown. No signal could be detected with adult
-TM (data not
shown).
-TM. As is evident from Fig. 6, mRNA for the A7 isoform of MHC
was detected only in the XmyogU1-injected samples, although expression
of the adult isoform of the
-TM gene was not induced.
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DISCUSSION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

View larger version (35K):
[in a new window]
Fig. 7.
Amino acid sequence alignment of XmyogU1 and
XmyogU2 with chicken (50), C. carpio (51), rat (2) and
human (3), myogenin homologs. The numbers in
parentheses indicated the amino acid residues for each
sequence. Identical amino acid residues are indicated by
dots. Dashes indicate gaps to assure the best
sequence alignment. The Pbx-Meis/Prep1 domain from
Cys75 to Lys86 (42) and the helix III domain
from Gln206 to Ile219 (14) are
underlined. In the C-terminal region, the residues shown in
boldface are conserved in at least six proteins. The
sequences were aligned using the LALIGN software (28). X-U1,
XmyogU1; X-U2, XmyogU2.
-sheet. Therefore, the two myogenins may adopt different
conformations that still allow interaction with regulatory proteins,
but that could modify their activity or potential gene targets.
/
mutant
(11), myogenin plays a unique role in muscle differentiation. But this
function of myogenin is in complete contrast to the functions of Myf5,
MyoD, and MRF4, none of which is needed for formation of skeletal
muscle in mice (9). Another model was recently proposed on the basis of
structural differences between the MyoD and myogenin proteins (14),
according to previous studies that emphasized the abilities of
determination factors to remodel the chromatin at the promoter of
silent muscle genes (48). In this model, the determination factors
initiate the expression of an array of genes that are subsequently
enhanced and maintained in transcription by the differentiation
factors, permitting the full level of gene expression needed for
terminal differentiation. Finally, Valdez et al. (10) have
propose an alternative model in which each MRF has evolved a
specialized as well as a redundant role in muscle differentiation,
depending on the promoter structure of the target muscle gene.
-TM genes is activated by myogenin and not
by the other MRFs. Interestingly, the expression of the adult fast
isoform of MHC is induced by XmyogU1 and not by XmyogU2. These results
suggest that, despite the high degree of structural homology between
the two isoforms of myogenin, i.e. only 11 different amino
acid residues, XmyogU1 and XmyogU2 target different sets of genes.
These findings substantiate the hypothesis of the existence of a
specificity of MRFs in muscle gene targeting and favor the model of
Valdez et al. (10), who predicted that some muscle genes
could discriminate among MRFs for their transactivation.
-TM genes during early Xenopus development. Indeed, the expression of these structural genes is not
correlated with the presence of their specific activator because the
embryonic/larval isoforms of MHC and
-TM appear at stages 21 and 25, respectively, when there is still no myogenin expression, and the adult
isoforms of MHC appear at stage 52, when only XmyogU2 is expressed.
This findings are consistent with previous studies showing that the
relationship between MRF and MHC expression is not causal (49). It can
be speculated that the activation of expression of these structural
genes by myogenin in Xenopus takes place in adult tissues in
the maintenance of a particular phenotype and during the
muscle-regenerating process.
![]()
ACKNOWLEDGEMENTS
-actin cDNAs and Dr.
C. G. B. Jennings for Xenopus MRF4 cDNA and
for the partial genomic clone of Xenopus myogenin. We also thank Dr. S. Hardy for the kind gift of
-TM primers. We thank L. Salin and E. Donsez for photographic work and for excellent technical
assistance. We thank Drs. R. Cassada, Sylvie Soues, and Claude Pariset
for critical reading of the manuscript.
![]()
FOOTNOTES
![]()
ABBREVIATIONS
-TM,
-tropomyosin;
RACE, rapid amplification of cDNA ends;
RT, reverse
transcription.
![]()
REFERENCES
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ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
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