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J. Biol. Chem., Vol. 277, Issue 2, 1190-1194, January 11, 2002
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From the Biochemistry Department, School of Biological Sciences,
University of Sussex, Falmer, Brighton BN1 9QG, United Kingdom
Received for publication, October 11, 2001, and in revised form, October 30, 2001
All higher plants and many fungi contain an
alternative oxidase (AOX), which branches from the cytochrome pathway
at the level of the quinone pool. In an attempt, first, to distinguish
between two proposed structural models of this di-iron protein, and,
second, to examine the roles of two highly conserved tyrosine residues, we have expressed an array of site-specific mutants in
Schizosaccharomyces pombe. Mitochondrial respiratory
analysis reveals that S. pombe cells expressing AOX
proteins in which Glu-217 or Glu-270 were mutated, no longer exhibit
antimycin-resistant oxygen uptake, indicating that these residues are
essential for AOX activity. Although such data corroborate a model that
describes the AOX as an interfacial membrane protein, they are not in
full agreement with the most recently proposed ligation sphere of its
di-iron center. We furthermore show that upon mutation of Tyr-253 and Tyr-275 to phenylalanines, AOX activity is fully maintained or abolished, respectively. These data are discussed in reference to the
importance of both residues in the catalytic cycle of the AOX.
The alternative oxidase
(AOX)1 is a ubiquinol:oxygen
oxidoreductase that catalyzes the four electron reduction of oxygen to water (for recent reviews, see Refs. 1-4). This terminal oxidase branches from the cytochrome pathway at the level of the ubiquinone pool and is non-protonmotive. The AOX is resistant to inhibitors of the
cytochrome pathway such as cyanide and antimycin A but inhibited by a
number of compounds including hydroxamic acids (e.g.
salicylhydroxamic acid) and n-alkyl-gallates.
Two structural models of the AOX currently exist. The first model
proposed by Siedow et al. (5, 6) was based on relatively few
AOX sequences and classified the AOX as a member of the di-iron family
of proteins that also includes the R2 subunit of ribonucleotide reductase and the hydroxylase component of methane monooxygenase. Based
on hydropathy analysis, the AOX was predicted to contain two
transmembrane helices that are connected by a helix located in the
intermembrane space (6) (Fig. 1A). Since this model was
proposed, further AOX sequences were identified, resulting in the
proposal by Andersson and Nordlund (7) of an alternative structural
model (Fig. 1B). Although this
second model also classifies the AOX as a di-iron protein, it differs
in the precise ligation sphere of the di-iron center (7). For instance,
one of the C-terminal Glu-X-X-His motifs
identified by Siedow et al. (5, 6), containing
Glu-270, appeared not to be fully conserved in the newly identified
sequences and consequently seemed unlikely to play a role in ligating
iron. Instead, Andersson and Nordlund used a third
Glu-X-X-His motif (that contains Glu-217, which
is located in the intermembrane space according to the Siedow et al. model) to coordinate the iron atoms. Since such a choice
implies that the transmembrane helices can no longer be retained,
Andersson and Nordlund (7) proposed that the AOX is an interfacial
rather than a transmembrane protein.
Recently, the IMMUTANS (Im) gene from
Arabidopsis thaliana has been sequenced and, interestingly,
was found to encode a plastid terminal oxidase (PTOX) that appears to
be distantly related to the AOX (8, 9). The limited but significant
homology of the Im gene to the AOX includes several
glutamate and histidine residues located in positions that could
contribute to iron binding. In the Im sequence, all but one
(Glu-269) of the amino acid residues that were proposed by Andersson
and Nordlund (7) to coordinate the di-iron centers are also present,
which these authors considered strong support for their model (10).
Importantly, however, the model was subtly adapted in so much that
Glu-269 was replaced by Glu-268, a residue that indeed is fully
conserved throughout all AOX and PTOX sequences.
To probe structure-function relationships, we have previously developed
a heterologous expression system in which the Sauromatum guttatum AOX is expressed in the fission yeast
Schizosaccharomyces pombe. In this system, the AOX is
functionally targeted to the mitochondria and as such confers
antimycin-resistant mitochondrial respiration upon S. pombe
cells (11). Using the system, we have previously shown that mutating
Glu-270 to alanine abolishes this antimycin-resistant respiratory
activity, suggesting that this residue is important for AOX activity
(12). In agreement with this finding, mutation of a corresponding
glutamate residue in the Trypanosoma brucei sequence that
was expressed in Escherichia coli also resulted in an
inactive AOX protein (13).
In addition to a catalytic site for the reduction of oxygen, the AOX
must also contain a binding site for its reducing substrate, ubiquinol.
Recognition of several structural features generally considered
important for quinone binding (14, 15) led Moore et al. (6)
to the suggestion that several residues situated at the matrix end of
the two membrane-spanning helices, including Tyr-253, could potentially
be involved in binding quinone.
In this study, we have used our S. pombe expression system
to investigate the role of Glu-217, a residue that may distinguish between the two existing models, and to study the potential role of
Tyr-253 in quinone binding. In addition, we have examined another tyrosine residue, Tyr-275 (equivalent to Tyr-280 in Berthold's nomenclature; see Ref. 10), which is also highly conserved and which
has been suggested to function in electron transport or to play a role
in quinone binding (10). Respiratory analysis reveals that mutation of
Tyr-253 to phenylalanine does not affect the activity of the AOX but,
importantly, that the oxidase is inactive upon mutation of Tyr-275 to
phenylalanine. Of particular significance is the finding that mutation
of Glu-217 to alanine results in an inactive AOX, demonstrating that
this residue plays an important role in the catalytic activity of the
AOX. Although our results suggest that the AOX is interfacial (as
proposed in Ref. 7) rather than a transmembranous membrane protein,
they are not in full agreement with the precise ligation sphere as outlined by Berthold et al. (10).
Strains and Growth Conditions--
The S. pombe
strain used was sp.011 (ade6-704, leu1-2,
ura4-D18, h-). Yeast media and growth conditions
were as described by Moreno et al. (16). The E. coli strains DH5 Plasmids--
pSLA-250 was constructed by ligating a 250-bp
ApaI-NcoI fragment from pAOSG81 (17) to
ApaI-NcoI-digested pSL1180 (Amersham Biosciences,
Inc.). pSLM is a modified version of pSL1180 that lacks the 50-bp
BamHI-EcoRI region of the multiple cloning site. pSLM-AO, which contains the full-length AOX sequence, was constructed by cloning a 1.4 kb XbaI-EcoRV fragment from
pAOSG81 into pSLM. pSLM-AOR, which contains the AOX in reverse
orientation, was constructed by digesting pSLM-AO with EcoRI
followed by ligation of the resultant fragments. pREP1-AOX, used to
express the wild-type AOX, and pREP1-E270N, used to express the Glu-270
mutant AOX, have been described previously (see Refs. 11 and 12, respectively).
Site-directed Mutagenesis--
Cys-172 was converted to alanine
(GCA) in pSLA-250 using dut-ung General Molecular Biology Procedures--
Oligonucleotides were
obtained from MWG Biotech. Mutations were originally identified by
restriction analysis and confirmed by sequencing. Full-length clones
were sequenced to check for spurious mutations. Sequencing was carried
out using the Sequenase version 2.0 kit (Amersham Biosciences), or
automated sequencing was performed by Genescreen Ltd. S. pombe cells were transformed using a modified lithium acetate
procedure (20) in order to express the various AOX proteins under
control of the nmt1 promoter, which is repressed by
thiamine. Other methods were as described by Sambrook et al.
(21).
Isolation of Mitochondria--
S. pombe mitochondria
were prepared from logarithmic phase 4-liter cultures grown overnight
in minimal medium in the absence of thiamine. Mitochondria were
isolated and purified as described previously (22) but without the
initial incubation in Respiratory Measurements--
Oxygen consumption was measured
polarographically using a Rank oxygen electrode in 2 ml of reaction
medium containing 0.3 M mannitol, 20 mM MOPS
(pH 7.2), 1 mM MgCl2, 5 mM
K2HPO4, 10 mM KCl. The
mitochondrial protein concentration was estimated using a bicinchoninic
acid kit (Pierce), with bovine serum albumin as the standard.
Gel Electrophoresis and Western Blotting--
Separation of
proteins on SDS-polyacrylamide gels, transfer to nitrocellulose
membranes, and probing with monoclonal antibodies specific for the AOX
(AOA antibodies (23)) was carried out as described previously (11).
Fig. 2 shows typical respiratory
traces and a Western blot analysis of Percoll-purified S. pombe mitochondria containing the wild-type (Fig. 2A),
E270N (Fig. 2B), or E217A (Fig. 2C) AOX. It can
be seen that mitochondria from the three types of cells readily oxidize
NADH in a manner that can be stimulated between 1.7- and 2-fold by the
addition of carbonyl cyanide m-chlorophenylhydrazone, demonstrating that electron transfer in these mitochondria is well
coupled to the generation of a protonmotive force. Fig. 2A reveals that the respiratory activity exhibited by mitochondria containing the wild-type AOX is partially resistant to antimycin A
(~18% of the NADH-dependent rate). This
antimycin-resistant respiratory rate is inhibited by the addition of
octyl-gallate, demonstrating that it is due to AOX activity, confirming
earlier observations made in nonpurified mitochondria (11, 12). Fig. 2
also shows that mitochondria isolated from cells containing the mutant
oxidases exhibit relatively little (E270N; Fig. 2B) and
almost no (E217A; Fig. 2C) antimycin-resistant respiratory activity (~6 and 2% of the respective NADH-dependent
rates). Western blot analysis indicates that the AOX protein is
expressed in all three types of cells (Fig. 2D). The
intensity of the immunoreactive bands indicates that wild-type, E270N,
and E217A forms of the AOX are expressed in amounts that are not
significantly different and therefore that lack of AOX activity
observed with the mutants is not due to lack of protein expression.
These results demonstrate that the mutation of either Glu-217 or
Glu-270 results in the loss of AOX activity, suggesting that both
residues are equally essential for AOX activity.
Structure of the Plant Alternative Oxidase
SITE-DIRECTED MUTAGENESIS PROVIDES NEW INFORMATION ON THE ACTIVE
SITE AND MEMBRANE TOPOLOGY*
,
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
![]()
INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

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Fig. 1.
Two proposed structural models of the
AOX. A, the transmembrane model proposed by Siedow
et al. (5, 6). B, the interfacial model proposed
by Andersson and Nordlund (7). The residue numbering refers
to the S. guttatum deduced amino acid sequence (17). The
structures are presented in a two-dimensional format, with
filled spheres representing the iron atoms, and
show the respective iron-binding motifs (EXXH).
Numbered residues indicate mutations of the AOX reported in
this paper. IMS, intermembrane space; IM, inner
membrane; M, matrix.
![]()
EXPERIMENTAL PROCEDURES
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES
, JM101, and JM110 were used for amplification
of plasmids, and CJ236 was used for dut
ung
mutagenesis. Single-stranded DNA was
produced by infection of bacteria with M13KO7 helper phage.
mutagenesis
based on the method originally described by Kunkel (18). This resulted
in the loss of the recognition site for SphI. The mutation
was isolated on an ApaI-NcoI fragment and cloned into the ApaI-NcoI site of pSLM-AO. The mutant
AOX was cut out on a BspHI-EcoRV fragment and
ligated to NcoI-SmaI-digested pREP1N (a modified
version of pREP1 (19), which contains an NcoI site instead
of NdeI) to give plasmid pREP1-C172A. Mutagenesis of
Glu-217, Tyr-253, and Tyr-275 was performed using the QuickChange
mutagenesis kit (Stratagene), according to the manufacturer's
instructions, with pSLM-AO. Glu-217 was converted to alanine (GCC),
which introduced a recognition site for the restriction enzyme
NciI. Tyr-253 and Tyr-275 were converted to phenylalanine
(TTC), which resulted in the loss of a recognition site for the
restriction enzyme KpnI and introduction of the recognition
site for the restriction enzyme HphI, respectively. Each
mutation was isolated on a NcoI-BstXI fragment
and cloned into pSLM-AOR. The mutant AOX fragments were cloned into the
NcoI-BamHI site of pREP1N on a
BspHI-BamHI fragment, giving pREP1-E217A,
pREP1-Y253F, and pREP1-Y275F.
-mercaptoethanol.
![]()
RESULTS
TOP
ABSTRACT
INTRODUCTION
EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
REFERENCES

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Fig. 2.
Respiratory and Western analyses of
Percoll-purified S. pombe mitochondria.
Mitochondria were prepared from cells containing the wild-type AOX
(A), the E270N mutant (B), or the E217A mutant
(C). Respiratory activity was determined with additions as
indicated: 1.8 mM NADH, 2 µM carbonyl cyanide
m-chlorophenylhydrazone (CCCP), 3.5 µM antimycin A (AA), and 5 µM
octyl-gallate (OG). Numbers on the
trace refer to oxygen consumption rates (expressed in nmol
of O2/min/mg of protein). D, immunoblot of
mitochondria from the same samples as in A-C probed with
AOA antibodies. The numbers on the right of the
immunoblot refer to the molecular masses of the standards
(in kDa).
Table I summarizes data obtained from extensive mitochondrial respiratory analyses and indicates the rates of coupled, uncoupled, and antimycin-resistant oxidation of NADH exhibited by the wild type and a variety of AOX mutants. From these results, it would seem that both the coupled and uncoupled NADH-dependent activities of the E217A mutant are slightly lower than those of the wild type and indeed of all the mutants studied. Although close scrutiny of the data would suggest that this observation is statistically not significant, a possible reason for the potential variations is, at present, unclear.
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In an attempt to determine if mutagenesis per se results in an inactive enzyme, which would invalidate the data shown in Fig. 2 and Table I, Cys-172, a highly conserved residue located in the N-terminal region of the protein, was mutated to alanine. Previous mutation of the corresponding cysteine in plant AOX sequences has been shown not to have any deleterious effect on AOX activity (24, 25), and we considered this a suitable residue to act as a control. It is clear from Table I that upon mutation of Cys-172, the AOX is indeed still fully active as reflected by a mitochondrial antimycin-resistant respiratory activity of 33 nmol of O2/min/mg of protein, which is not significantly different from wild-type activity. Such an observation confirms that site-directed mutagenesis per se does not result in an inactive enzyme, and we therefore consider the data presented in Table I a valid indication of the importance of the studied residues for the structure and mechanism of the AOX.
In the Moore et al. (6) model, a conserved tyrosine residue,
Tyr-253, that is situated at the base of one of the transmembrane helices was proposed to be involved in quinone binding. In this respect, an additional tyrosine residue, Tyr-275, has also been identified as of potential importance by Berthold et al.
(10). Table I shows that cells expressing the AOX protein in which Tyr-253 was mutated to phenylalanine exhibit a mitochondrial
antimycin-resistant respiratory activity that is comparable with that
of the wild type. However, in cells expressing a protein in which
Tyr-275 was mutated to phenylalanine, such activity is barely
detectable (Table I). Western blot analysis indicates that the Y253F
and Y275F AOX proteins are expressed in equal amounts (data not shown).
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DISCUSSION |
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Despite significant advances in our understanding of the AOX, the enzyme has proved difficult to purify to homogeneity and is elusive to spectroscopic analyses. However, progress in the characterization of the AOX has included isolation of cDNA sequences from a number of species, which has led to the development of two hypothetical models of the AOX (5-7). Although both models classify the AOX as a member of the di-iron carboxylate family of proteins, the major difference between them concerns the topology of the enzyme within the inner mitochondrial membrane. In this paper, we have presented data obtained from studies in which an array of site-directed AOX mutants was expressed in S. pombe, a functional expression system that is highly suited to study AOX activity in situ (11, 12, 26). Importantly, our results provide the first experimental information to distinguish between the two structural models and, furthermore, provide insights into the possible roles of two highly conserved tyrosine residues.
From Fig. 2C it is evident that mutation of Glu-217 to alanine produces an inactive AOX, strongly suggesting that Glu-217 is essential for activity. This result has major implications as to the plausibility of the two structural models. Siedow et al. (5, 6) implicitly suggested that Glu-217 would be located at the cytoplasmic side of the inner mitochondrial membrane. Since both reduction of oxygen and oxidation of ubiquinol were proposed to occur toward the matrix side of the membrane, it is hard to envisage how Glu-217 would play a functional role in such a model. In contrast, Glu-217 plays a key role in the coordination of the di-iron center in the Andersson and Nordlund model (7) (it bridges the iron atoms). Our result, therefore, supports the latter model, which would imply that the AOX is indeed an interfacial membrane protein associated with the matrix side of the membrane. Analysis of AOX sequences, using the membrane protein topology prediction method that was recently reported by Krogh et al. (27), corroborates this notion. Although two relatively hydrophobic regions were identified in the primary structure of the AOX, these were considered, based on the algorithm's stringent criteria (27), not to be membrane-spanning (data not shown).
Following the identification of the Im gene, 19 amino acid residues appeared totally conserved between the AOX and PTOX sequences (10). Berthold et al. (10) focused upon these totally conserved residues as additional evidence in support of the Andersson and Nordlund model. However, certain regions of significant homology in AOX sequences are absent in the PTOX sequences. For example, three glutamate residues (Glu-268, Glu-269, and Glu-270) are completely conserved in all AOX sequences examined to date, but only one glutamate (Glu-268) is present in the PTOX. In the Andersson and Nordlund model, Glu-270 plays no essential role, since it was suggested not to be part of the ligation sphere. In contrast, the results presented in this paper, in addition to our previous publication (12) and along with the mutation of the Trypanosome AOX (13), would suggest that Glu-270 is an important residue. If it is the case that Glu-270 does not ligate iron, then the only likely way that mutation of Glu-270 could affect AOX activity is by disrupting the structural stability of the active site because of its proximity to the di-iron center. However, we have previously shown that, like the wild-type AOX, the E270N mutant is correctly targeted and integrated within the inner mitochondrial membrane (12). As argued previously (12), it is highly unlikely that an incorrectly folded protein would be targeted and integrated in such a successful manner. Based on Fig. 2, it can therefore be concluded that Glu-217 is required for activity of the AOX, supporting the proposal by Andersson and Nordlund that the protein is interfacial. However, the lack of activity of the E270N mutant AOX would suggest that the detailed ligation sphere proposed by these authors is not necessarily the correct one for all species.
With the identification of the Im gene and its homology to the AOX, it may be tempting to focus totally on the conserved residues between these two distantly related proteins. Equally, focusing on the Im gene may have the effect of grouping all AOX and PTOX proteins into a single category, which may not be advisable. Umbach and Siedow (28) suggest that there appear to be two general types of AOX sequences in plants and fungi. From sequence comparisons, they have demonstrated that Im contains neither a domain present in plants, surrounding the regulatory cysteine, nor a fungus-specific sequence (28). Hence, there may be subtle differences between AOX sequences from different species with roles not yet identified, and it is therefore interesting to speculate that there could be two or more classes of AOX and that possibly Im belongs to a third group. We feel that one should be cautious in the classification of all of the AOX proteins (plants, algae, protist, and fungi) together with the PTOX as one group. Whereas the overall structure of the enzyme, including its active site, might be conserved, subtle species-specific differences as to the exact ligation sphere of the di-iron center may exist.
The structure of several enzymes that interact with quinone/quinol have been determined to atomic resolution (14, 15, 29). However, this has not yet led to the elucidation of a universal structure of a quinone-binding site. Several features that might generally be important in quinone binding have nevertheless been suggested. For example, mapping of the quinone-binding site in complex III has resulted in a model analogous to quinone sites in photosynthetic reaction centers in which the quinone-binding pocket is formed by the ends of two transmembrane helices (30). Aromatic residues have also been identified near quinone-binding regions where the aromatic ring may interact with the quinone head group in a parallel manner (15, 31). Tyr-253, originally identified in the model proposed by Moore et al. (6) as situated at the base of the transmembrane helices, has been proposed to be involved in quinone binding. In the Andersson and Nordlund model, Tyr-253 is located in a hydrophobic crevice that could potentially form a quinone-binding site (7, 10). However, it is important to recognize that this residue could have other functions. Reactive tyrosines are important in a number of enzyme activities including photosystem II (32) and cytochrome oxidase (33, 34). Modification of bacterial reaction centers to mimic photosystem II indicates that, after mutation to tyrosines, these substituted residues could participate in radical formation (35). Therefore, it has been suggested that, in addition to a role in quinone binding, Tyr-253 could provide a tyrosyl radical involved in electron transport or, alternatively, may play a structural role (10). Our results appear to rule out one of the possible roles for Tyr-253, namely a role in electron transport, since its mutation to phenylalanine does not result in any loss of catalytic activity. However, based on the data in this report, it is not possible yet to say whether Tyr-253 has a role in quinone binding or some structural role. Preliminary results from our laboratory suggest that both the wild-type and the Y253F mutated AOX exhibit similar sensitivities to the phenolic inhibitors salicylhydroxamic acid and octyl-gallate.2 This may indicate that Tyr-253 is not involved in quinone binding. It should be emphasized, however, that our steady-state oxygen consumption measurements lack the time resolution to conclusively exclude a role for Tyr-253 in the binding and/or oxidation of ubiquinol.
The proposal that Tyr-253 could play a role in quinone binding was originally based on a limited amount of sequence data (6). However, examination of the currently available sequences reveals that this residue is totally conserved among all AOX and even the PTOX sequences. Recently, a computer search of respiratory and photosynthetic complexes that react with quinones has resulted in the identification of a putative quinone-binding motif, consisting of a triad element and a His-Arg pair, which may be present, although weakly conserved, in the AOX (36). The proposed quinone-binding role of Tyr-253 is all the more intriguing, since this residue is situated close to the His-Arg pair. Furthermore, Tyr-253 is in close proximity to residues that have been identified through inhibitor (salicylhydroxamic acid) resistance screens, as of importance in quinone binding (37).
As discussed previously, tyrosine residues could fulfill a number of roles, and, interestingly, several conserved tyrosine residues are present in the AOX. These include Tyr-266, Tyr-275, and Tyr-299, all of which are highly conserved, although Tyr-266 and Tyr-299 not fully across all species. Tyr-266 has been replaced by a phenylalanine in Chlamydomonas reinhardtii and by a cysteine in all of the PTOX sequences. Tyr-299 is conserved in the PTOX and in all AOX sequences except the Trypanosome sequence. Apart from Tyr-253, Tyr-275 is the only tyrosine residue that is present in all available AOX and PTOX sequences. Interestingly, the Andersson and Nordlund model places Tyr-275 in close spacial proximity to the di-iron center (10). The results presented in Table I show that mutation of Tyr-275 results in an inactive AOX, suggesting that Tyr-275, unlike Tyr-253, is essential for AOX activity and is potentially involved in electron transport.
Based on the proposed reaction mechanisms of MMOH (the hydroxylase
component of methane monooxygenase) and the R2 subunit of
ribonucleotide reductase (cf. Ref. 38), two mechanisms have been put forward for the catalytic cycle of the AOX (10, 39), neither
of which predicts involvement of a reactive tyrosine residue. Our
results are the first to suggest such a role, which is not without
precedence in oxidase activity (40). In this respect, it is very
interesting to note that a conserved tyrosine is also present (at a
locus similar to that of Tyr-275 in the AOX) in rubrerythrin, a di-iron
carboxylate protein that has recently been shown to exhibit oxidase
activity (41). Clearly, further studies are required to elucidate the
exact role of Tyr-275 and other conserved residues in the catalytic
mechanism of the AOX.
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ACKNOWLEDGEMENTS |
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We are indebted to Dr. Tom Elthon for the generous gift of AOA monoclonal antibodies and to Dr. Lee McIntosh for the S. guttatum pAOSG81 clone.
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FOOTNOTES |
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* This work was supported by a grant from the Biotechnology and Biological Sciences Research Council.The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
To whom correspondence should be addressed. Tel.: 44-1273-872696;
Fax: 44-1273-678433; E-mail: M.S.Albury@sussex.ac.uk.
Published, JBC Papers in Press, November 6, 2001, DOI 10.1074/jbc.M109853200
2 P. G. Crichton, C. Affourtit, M. S. Albury, and A. L. Moore, unpublished observations.
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ABBREVIATIONS |
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The abbreviations used are: AOX, alternative oxidase; PTOX, plastid terminal oxidase; MOPS, 3-(N-morpholino)propanesulfonic acid; AOA, alternative oxidase, all antibodies.
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REFERENCES |
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| 1. | Vanlerberghe, G. C., and McIntosh, L. (1997) Annu. Rev. Plant Physiol. Plant Mol. Biol. 48, 703-734 |
| 2. | Wagner, A. M., and Moore, A. L. (1997) Biosci. Rep. 17, 319-333 |
| 3. | Siedow, J. N., and Umbach, A. L. (2000) Biochim. Biophys. Acta 1459, 432-439 |
| 4. | Affourtit, C., Krab, K., and Moore, A. L. (2001) Biochim. Biophys. Acta 1504, 58-69 |
| 5. | Siedow, J. N., Umbach, A. L., and Moore, A. L. (1995) FEBS Lett. 362, 10-14 |
| 6. | Moore, A. L., Umbach, A. L., and Siedow, J. N. (1995) J. Bioenerg. Biomembr. 27, 367-377 |
| 7. | Andersson, M. E., and Nordlund, P. (1999) FEBS Lett. 449, 17-22 |
| 8. | Wu, D., Wright, D. A., Wetzel, C., Voytas, D. F., and Rodermel, S. (1999) Plant Cell 11, 43-55 |
| 9. | Carol, P., Stevenson, D., Bisanz, C., Breitenbach, J., Sandmann, G., Mache, R., Coupland, G., and Kuntz, M. (1999) Plant Cell 11, 57-68 |
| 10. | Berthold, D. A., Andersson, M. E., and Nordlund, P. (2000) Biochim. Biophys. Acta 1460, 241-254 |
| 11. | Albury, M. S., Dudley, P., Watts, F. Z., and Moore, A. L. (1996) J. Biol. Chem. 271, 17062-17066 |
| 12. | Albury, M. S., Affourtit, C., and Moore, A. L. (1998) J. Biol. Chem. 273, 30301-30305 |
| 13. | Chaudhuri, M., Ajayi, W., and Hill, G. C. (1998) Mol. Biochem. Parasitol. 95, 53-68 |
| 14. | Deisenhofer, J., Epp, O., Miki, K., Huber, R., and Michel, H. (1985) Nature 318, 618-624 |
| 15. | Allen, J. P., Feher, G., Yeates, T. O., Komiya, H., and Rees, D. C. (1988) Proc. Natl. Acad. Sci. U. S. A. 85, 8487-8491 |
| 16. | Moreno, S., Klar, A., and Nurse, P. (1991) Methods Enzymol. 194, 795-823 |
| 17. | Rhoads, D. M., and McIntosh, L. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 2122-2126 |
| 18. | Kunkel, T. A., Roberts, J. D., and Zakour, R. A. (1987) Methods Enzymol. 154, 367-382 |
| 19. | Maundrell, K. (1990) J. Biol. Chem. 265, 10857-10864 |
| 20. | Okazaki, K., Okazaki, N., Kume, K., Jinno, S., Tanaka, K., and Okayama, H. (1990) Nucleic Acids Res. 18, 6485-6489 |
| 21. | Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual , 2nd Ed. , Cold Spring Harbor Laboratory, Cold Spring Harbor, NY |
| 22. | Moore, A. L., Walters, A. J., Thorpe, J., Fricaud, A. C., and Watts, F. Z. (1992) Yeast 8, 923-933 |
| 23. | Elthon, T. E., Nickels, R. L., and Mcintosh, L. (1989) Plant Physiol. 89, 1311-1317 |
| 24. | Vanlerberghe, G. C., McIntosh, L., and Yip, J. Y. H. (1998) Plant Cell 10, 1551-1560 |
| 25. | Rhoads, D. M., Umbach, A. L., Sweet, C. R., Lennon, A. M., Rauch, G. S., and Siedow, J. N. (1998) J. Biol. Chem. 273, 30750-30756 |
| 26. | Affourtit, C., Albury, M. S., Krab, K., and Moore, A. L. (1999) J. Biol. Chem. 274, 6212-6218 |
| 27. | Krogh, A., Larsson, B., von Heijne, G., and Sonnhammer, E. L. L. (2001) J. Mol. Biol. 305, 567-580 |
| 28. | Umbach, A. L., and Siedow, J. N. (2000) Arch. Biochem. Biophys. 378, 234-245 |
| 29. | Iwata, S., Lee, J. W., Okada, K., Lee, J. K., Iwata, M., Rasmussen, B., Link, T. A., Ramaswamy, S., and Jap, B. K. (1998) Science 281, 64-71 |
| 30. | Zhang, Z., Huang, L., Shulmeister, V. M., Chi, Y. I., Kim, K. K., Hung, L. W., Crofts, A. R., Berry, E. A., and Kim, S. H. (1998) Nature 392, 677-684 |
| 31. | Stowell, M. H. B., McPhillips, T. M., Rees, D. C., Soltis, S. M., Abresch, E., and Feher, G. (1997) Science 276, 812-816 |
| 32. | Hoganson, C. W., and Babcock, G. T. (1997) Science 277, 1953-1956 |
| 33. | Proshlyakov, D. A., Pressler, M. A., DeMaso, C., Leykam, J. F., DeWitt, D. L., and Babcock, G. T. (2000) Science 290, 1588-1591 |
| 34. | Ostermeier, C., Harrenga, A., Ermler, U., and Michel, H. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 10547-10553 |
| 35. | Kalman, L., LoBrutto, R., Allen, J. P., and Williams, J. C. (1999) Nature 402, 696-699 |
| 36. | Fisher, N., and Rich, P. R. (2000) J. Mol. Biol. 296, 1153-1162 |
| 37. | Berthold, D. A. (1998) Biochim. Biophys. Acta 1364, 73-83 |
| 38. | Wallar, B. J., and Lipscomb, J. D. (1996) Chem. Rev. 96, 2625-2657 |
| 39. | Affourtit, C., Albury, M. S., Whitehouse, D. G., and Moore, A. L. (2000) Pest Manag. Sci. 56, 31-38 |
| 40. | Babcock, G. T. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 12971-12973 |
| 41. | Gomes, C. M., Le, Gall, J., Xavier, A. V., and Teixeira, M. (2001) Chem. Biochem. 2, 583-587 |
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