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Originally published In Press as doi:10.1074/jbc.M201906200 on May 30, 2002
J. Biol. Chem., Vol. 277, Issue 35, 32036-32045, August 30, 2002
Functional Neutralization of HIV-1 Vif Protein by Intracellular
Immunization Inhibits Reverse Transcription and Viral
Replication*
Joao
Goncalvesab,
Frederico
Silvaac,
Acilino
Freitas-Vieiraad,
Mariana
Santa-Martaac,
Rui
Malhóe,
Xiaoyu
Yangfgh,
Dana
Gabuzdafhi, and
Carlos
Barbas IIIj
From the a URIA-Centro de Patogénese Molecular,
Faculdade de Farmácia, University of Lisbon, 1649-019 Portugal, the e Department of Plant Biology,
Faculdade de Ciencias Lisboa, University of Lisbon, 1600 Portugal, the f Department of Cancer Immunology and AIDS, Dana
Farber Cancer Institute, Boston, Massachusetts 02115, the Departments
of g Pathology and i Neurology, Harvard Medical School,
Boston, Massachusetts 02115, and the j Skaggs Institute for
Chemical Biology and Department of Molecular Biology, The Scripps
Research Institute, La Jolla, California 92037
Received for publication, February 26, 2002, and in revised form, May 23, 2002
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ABSTRACT |
Human immunodeficiency virus type 1 (HIV-1)-encoded Vif protein is important for viral replication and
infectivity. Vif is a cytoplasmic protein that acts during virus
assembly by an unknown mechanism, enhancing viral infectivity. The
action of Vif in producer cells is essential for the completion of
proviral DNA synthesis following virus entry. Therefore, Vif is
considered to be an important alternative therapeutic target for
inhibition of viral infectivity at the level of viral assembly and
reverse transcription. To gain insight into this process, we developed
a Vif-specific single-chain antibody and expressed it intracellularly
in the cytoplasm. This intrabody efficiently bound Vif protein and
neutralized its infectivity-enhancing function. Intrabody-expressing
cells were shown to be highly refractory to challenge with different
strains of HIV-1 and HIV-1-infected cells. Inhibition of Vif by
intrabody expression in the donor cell produced viral particles that do
not complete reverse transcription in the recipient cell. The anti-Vif
scFv was shown to be specific for Vif protein because its function was
observed only in nonpermissive cells (H9, CEM, and U38). Moreover,
transduction of peripheral blood mononuclear cells with an
HIV-derived retroviral vector expressing Vif intrabody was shown to
confer resistance to laboratory-adapted and primary HIV strains. This
study provides biochemical evidence for the role of Vif in the HIV-1
lifecycle and validates Vif as a target for the control of HIV-1 infection.
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INTRODUCTION |
Human immunodeficiency virus type 1 (HIV-1)1 is a complex
retrovirus that contains a number of accessory genes not present in
other retroviruses. One of the critical determinants of HIV-1 infectivity in vivo is the Vif protein. Vif
(virion infectivity factor) is
essential for the establishment of productive infection of HIV-1 in
peripheral blood lymphocytes and macrophages in vitro and
for pathogenesis in animal models of AIDS (1-7). In cell culture,
vif-defective HIV-1 is able to replicate in some
T-lymphoblastoid cell lines termed permissive (CEM-SS, SupT1, C8166,
and Jurkat), whereas Vif is required in other cell lines, such as H9,
U38, or MT-2, termed nonpermissive (2, 4, 6, 8, 9). Vif acts during
late steps of the viral life cycle to increase the infectivity of HIV-1
virus particles as much as 100-1000-fold. Vif plays a critical role in
the cell-free transmission of HIV-1 and also appears to be important
for cell-to-cell virus transmission (4-6). Previous studies have shown
that Vif acts to enhance viral infectivity during the production of
virus particles, most likely by affecting virus assembly or maturation
(10-14).
Vif is a phosphorylated 23-kDa protein in multimer form that is
abundantly expressed in the cytoplasm of infected cells (15-18, 22-25). Vif has been shown to interact or co-purify with membranes (15, 21), intermediate filaments (22), HIV-1 Gag (23, 11), and, most
recently, viral RNA (16, 19, 26). It was also proposed that Vif
counteracts the tyrosine kinase Hck as an inhibitor of HIV-1
replication (27). Virus particles produced in the absence of a
functional Vif protein can bind and penetrate susceptible cells but are
defective in their ability to synthesize proviral DNA, most likely
indirectly as a result of an effect on a component of the virus core
(6, 24, 25, 28). Virus uncoating, reverse transcription, transport of
the preintegration complex to the nucleus, and subsequent integration
of the viral DNA into the host genome are necessary steps that must
occur for infection to be established (30).
Intrabodies are single-chain variable region antibody fragments
expressed and confined intracellularly, where they can bind to viral
proteins and other targets (29, 31, 33-37). The early events of the
viral life cycle are potential therapeutic targets that could be
inhibited using anti-HIV-1 Vif intrabody-based strategies and may
therefore represent a new therapeutic approach to inhibit HIV-1 reverse
transcription. Therefore, strategies that prevent or limit expression
of Vif are expected to be beneficial in the treatment of HIV-1 disease
(29, 39).
Here we have investigated the potential benefit of intracellular
neutralization of Vif activity (36, 37, 40). We developed a
Vif-specific single-chain antibody from immunized rabbits that was
expressed intracellularly and confined to the cytoplasm. Cell lines and
primary cells expressing the Vif intrabody were shown to be highly
refractory to challenge with the HIV-1 virus or HIV-1-infected cells.
Furthermore, replication of an HIV virus constructed to express
anti-Vif scFv in cis was highly reduced after challenge with
wild-type HIV-1. The formation of completed reverse transcripts was
reduced when cells were infected with HIV-1 virus produced from
intrabody-producing cells. These results suggest that gene therapy
approaches, which deliver Vif intracellular antibodies, may represent a
new therapeutic strategy for inhibiting HIV reverse transcription.
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EXPERIMENTAL PROCEDURES |
Cells, Viruses, and Reagents
Cells--
H9, U38, Jurkat, SupT1, and CEM cells were grown in
RPMI 1640 medium containing 10% fetal bovine serum and antibiotics.
All of the cell cultures were maintained at 37 °C in 5%
CO2. Human PBMC from healthy donors were activated for
48 h with phytohemagglutinin (PHA) and were then cultivated in
RPMI 1640 medium supplemented with 20% fetal calf serum and 50 units
of interleukin-2/ml (Roche Molecular Biochemicals). HeLa and 293T cells
were grown in Dulbecco's modified minimal essential medium
supplemented with 10% fetal calf serum. Transduced cells were usually
maintained in the presence of puromycin (0.5 µg/ml). The tissue
culture media and reagents were from BioWhitaker.
Viruses--
Plasmids coding for HIV-1NL4-3,
pHIV-1NL4-3 vif, and HIV-2ROD
were obtained from the AIDS Research and Reference Reagent Program.
HIV-1 primary strains Ac178 and strain Je524 isolated from
HIV-1-infected children were obtained from Prof. M. Helena
Lourenço (Faculdade de Farmácia de Lisboa, Lisboa, Portugal).
Plasmids--
Plasmid pSVLvif expresses the
vif gene of the HXB2 clone of HIV-1 under the control of the
SV40 promoter (15). Plasmids for the trans-complementation
assay were described previously (15). Plasmid pComb3X is derived from
pComb3H (33). The coding sequence for anti-thyroglobulin scFv is cloned
in plasmid pHEN obtained from Griffiths et al. (41). The
envelope plasmid pMD.G, the packaging plasmid pCMVR8.91, and the vector
plasmid pRRL.SIN have been described previously and were kindly
provided by Didier Trono (42-44). pHXBnPLAP-IRES-N+ was obtained from
the AIDS Research and Reference Reagent Program.
Antibodies--
Rabbit polyclonal Vif was described previously
(15). For detection of Vif protein, rhodamine-conjugated sheep
anti-rabbit immunoglobulin was used as a secondary antibody (Pierce).
HRP-conjugated anti-M13 phage antibody was obtained from Amersham
Biosciences. FITC-conjugated, HRP-conjugated, and nonconjugated anti-HA
high affinity antibody was purchased from Roche.
Proteins--
Vif protein was derived from HIV-1HXB2
strain and purified as described (45, 46). HIV-1 protease was obtained
from the AIDS Research and Reference Reagent Program.
DNA Transfections
To produce large amounts of HIV-1 particles, 5 × 106 293T cells were transfected by FuGENE (Roche) with 2 µg of wild-type HIV-1NL4-3 or mutant
pHIV-1NL4-3 vif. After 24 h Jurkat and
H9 cells were co-cultured during 48 h in the presence of 50 µg/ml of dextran. The cells were maintained in RPMI medium plus 15%
fetal calf serum. p24 antigen concentration was determined as
recommended by the manufacturer (Innotest). For immunofluorescence and
co-immunoprecipitation experiments, HeLa cells were co-transfected by
the FuGENE reagent (Roche) according to the manufacturer's protocol
with 2 µg of pSVLvif and 2-fold molar excess of plasmid
encoding intrabodies or with control plasmid, pcDNA3.1/Neo
containing no insert. For co-immunoprecipitation, cell lysis was
performed as described by Anderson (47). For immunoprecipitation,
magnetic protein A beads were used as described by the manufacturer
(Miltenyi Biotec).
Replication Complementation Assay
A transient complementation assay was used to provide a
quantitative measure of the ability of wild-type or mutant Vif proteins to complement a single round of HIV-1 replication in trans.
Briefly, H9 cells (107) were co-transfected by FuGENE
(Roche), with 2 µg of either pHXB envCAT or
pHXB Avr envCAT, 2 µg pSVIIIenv, and plasmids encoding
scFv as described (49). The ability of the intrabody to inhibit a single round of infection was measured by assaying for chloramphenicol acetyltransferase (CAT) activity in the transfected culture at 9 or 10 days after transfection. CAT assay was performed by ELISA (Roche).
Immunofluorescence Staining
HeLa cells transfected by FuGENE with 2 µg of plasmids were
fixed in phosphate-buffered saline (PBS) with 4% paraformaldehyde for
10 min at room temperature, permeabilized with PBS plus 0.1% Triton
X-100 for 5 min, and washed with PBS plus 2% fetal calf serum before
staining. The fixed cells were incubated with Vif antiserum (1:200) for
90 min at 37 °C, incubated with rhodamine-conjugated goat
anti-rabbit immunoglobulin antibody (1:200) for 20 min at 37 °C,
washed, and mounted on glass slides. For immunostaining of scFv, direct
immunofluorescence was performed with FITC-conjugated anti-HA
monoclonal antibody (1:40). For double immunofluorescence staining of
intrabodies and Vif protein, FITC-conjugated anti-HA monoclonal
antibody was used in combination with Vif antiserum at similar
concentrations. The imaging setup consists of an Olympus IX-50 inverted
microscope, Ludl BioPoint filter wheels and a 12-bit V-scan cool CCD
(Photonic Science). Integrated control of filter wheel and image
acquisition is achieved by Image-Pro Plus 4.0 and Scope-Pro 3.1 (Media
Cybernetics). The settings for image acquisition (camera exposure time,
filters, time interval, and storing modes) were determined by
custom-made macros. The images were collected with Olympus 40× or
100× plan apo objectives (numerical apertures = 0.95 and 1.4, respectively).
Rabbit Immunization
A rabbit (New Zealand White) was treated with four subcutaneous
injections containing 50 µg of purified Vif protein in a 1-ml emulsion of adjuvant (Ribi Immunochem Research, Hamilton, MT). The
injections were administered at 2-3-week intervals. Five days after
the final boost, spleen and bone marrow were harvested and used for
total RNA preparation (48, 50).
RNA Isolation, cDNA Synthesis, Rabbit Antibody Library
Construction, and Sfi Cloning
Total RNA was prepared from rabbit bone marrow and spleen using
TRI reagent from the Molecular Research Center (Cincinnati, OH)
according the manufacturer's protocol and was further purified by
lithium chloride precipitation. First strand cDNA was synthesized using the SUPERSCRIPT Preamplification System with oligo(dT) priming (Invitrogen). The protocol and the oligonucleotide primers for the
construction of chimeric rabbit antibody libraries, where rabbit VL and
VH sequences are combined with human C and CH1 sequences, have been
described previously (32). Final PCR fragments encoding a
library of antibody fragments were Sfi-cut, purified, and cloned into
pComb3X vector. PComb3X contains a suppressor stop codon and sequences
encoding peptide tags for purification (His6) and detection
(HA) (50).
Expression and Purification of Fab Fragments
PCR fragments encoding Fab were generated by overlap extension
PCR and cloned into pComb3X vector. To express Fab, phagemid DNA was
transformed into the nonsuppressor Escherichia coli strain TOP 10F (50). Fab was purified from the concentrated supernatants of
induced cultures by affinity chromatography. Purified Fab fragments were analyzed by SDS-PAGE followed by Coomassie Blue staining and
Western blot with HRP-conjugated anti-HA monoclonal antibody. Protein
concentration was determined by measuring the optical density at 280 nm
by the classic Bradford method.
DNA Constructs
For the conversion of a Vif-specific Fab into a scFv, specific
oligonucleotides primers were used to amplify VH and
VL gene segments from purified phagemid DNA isolated from
J4, a Fab fragment specific for the Vif protein. This Fab was isolated
from an immunized rabbit by using the phage display approach (50).
The following primers were used: VL, RSCVK1,
5'-GGGCCCAGGCGGCCGAGCTCGTGMTGACCCAGACTCCA-3', and RKB9J0-B,
5'-GGAAGATCTAGAGGAACCACCTAGGATCTCCAGCTCGGTCCC-3'; and VH,
RSCVH3, 5'-GGTGGTTCCTCTAGATCTTCCCAGTCGYTGGAGGAGTCCGGG-3', and HSCG1234,
5'-CCTGGCCGGCCTGGCCACTAGTGACCGATGGGCCCTTGGTGGARGC-3'. The purified PCR
products were assembled by another PCR using the following primers:
RSC-F, 5'-GAGGAGGAGGAGGAGGAGGCGGGGCCCAGGCGGCCGAGCTC-3', and RSC-B,
5'-GAGGAGGAGGAGGAGGAGCCTGGCCGGCCTGGCCACTAGTG-3'. The resulting
overlap PCR product encodes an scFv in which the N-terminal VL region is linked with the VH region through
a 7-amino acid peptide linker (GGSSRSS) and a 18-amino acid peptide
linker (SSGGGGSGGGGGGSSRSS), named scFv 4B and 4BL, respectively. The
DNA fragment was gel-purified, digested with the restriction
endonuclease SfiI, and cloned into the appropriately cut
phagemid vector pComb3X, a variant of pComb3H. The binding activity of
the expressed scFv was confirmed, and the genes encoding the scFv were
transferred to pCDNA3.1/Neo (Invitrogen), pBabePuro vectors, and
pRRL.SIN. A methionine initiation codon sequence was added into
the 4BL and 4B scFv by PCR amplification. The primers used for cloning
in pCDNA3.1 were scFv5, 5'-GGCATGGGGGCCCAGGCGGCCCAGCTC-3', and
scFv3, 5'-GCCACCACCCTCCTAAGAAGC-3'. Similar primers were used for
cloning anti-Vif scFv in pBabePuro and pRRL.SIN: Vector/scFv5, 5'-CGCGGATCCGCGGGCATGGGGGCCCAGGCGGCCGAGCTC-3', and Vector/scFv3, 5'-ACGCGTCGACGTCGGATATCGCGGCCGCGGAAGCCACCACCCTCCTAAGAAGC-3'. Downstream of the sequence, we maintained a sequence encoding the HA tag sequence
(YPYDVPDYA) followed by a stop codon. Control scFv anti-thyroglobulin was amplified from pHEN2 and Sfi-cloned in pComb3X. A methionine was
introduced at the N terminus, and the DNA fragment with a HA-tag at the
C terminus was cloned into the appropriately digested vector DNAs. The
modified pcDNA3.1/Neo plasmid encoding 4BL, 4B, and
anti-thyroglobulin was designated pI4BL, pI4B, and pThyr. Anti-Vif
scFv I4BL and anti-thyroglobulin was cloned in pHXBnPLAP-IRES-N+ by
inserting the gene in place of PLAP-IRES-nef. The primers used for
cloning were scFv5/HIV,
5'-ATAAGAATGCGGCCGCTAAACTATATGGGGGCCCAGGCGGCCGAGCTC-3', and
scFv3/HIV, 5'-CCGCTCGAGC- GGGCCACCACCCTCCTAAGAAGC-3'.
In Vitro Studies of Anti-Vif Antibody Fragments
The methods for bacterial expression of anti-Vif scFv were
described before (50). Briefly, scFv were cloned in pComb3X that allows
the expression in the supernatant and purification with a
Ni2+-NTA column caused by the presence of a
His6 tag at the C-terminal end. After induction of scFv
expression by growth in 1 mM
isopropyl- -D-thiogalactopyranoside for 20 h at
30 °C, analysis of supernatants indicated that both anti-Vif scFv
were expressed. For assays of expression of antibody fractions, 1 ml of
culture supernatant was concentrated (Amicon 10) and separated by 12%
PAGE. For purification of ScFv and Fab proteins, 100 ml of
bacterial supernatant were concentrated to 2 ml (Centricon 30), and
Ni2+ columns were used (CLONTECH).
Relative binding affinities of anti-Vif ScFv were determined via ELISA
after coating of the wells with 200 ng of purified recombinant HIV-1
Vif protein. Purified anti-Vif scFv and Fab were diluted at various
concentrations starting at 5 µg/ml and added to the wells for further
incubation. After washing the wells with PBS, horseradish-conjugated
anti-HA monoclonal antibody was applied for detection. Recognition of
Vif by anti-Vif scFv and Fab was next demonstrated by Western blot
analysis. Vif protein and HIV-1 protease (200 ng) were separated by
PAGE and transferred to nitrocellulose membranes. After blocking, the
proteins were probed with anti-Vif Fab and scFv antibody fragments and then with horseradish-conjugated anti-HA monoclonal antibody as a
secondary antibody. The proteins were visualized using the ECL system
(Amersham Biosciences).
Retroviral Gene Transfer: Generation of Transduced H9 and
Jurkat Cells
The amphotropic packaging cell line PhoenixAmpho was transfected
with pBabe Puro plasmids encoding the anti-Vif scFv inserts (51). For
control purposes pBabe Puro plasmids encoding scFv specific to
thyroglobulin were also used (41). These packaging cell lines were used
to generate virus-containing medium for two rounds of infection of H9
and Jurkat cells in the presence of 10 µg/ml Polybrene (Calbiochem).
Two days after the last infection, transduced H9 and Jurkat cells were
selected in puromycin (0.5 µg/ml) by limiting dilution cloning. After
15 days of selection, analysis of cells for anti-Vif expression and
infectability was started. The untransduced parental H9 and Jurkat cell
lines were named H9-P and Jurkat-P, respectively, and the H9 and Jurkat
cells transduced to express anti-Vif intrabodies were named H9-I4BL, H9-I4B, Jurkat-I4BL, and Jurkat-I4B. The cell lines transduced to
express the control intrabody anti-thyroglobulin were named H9-thyr and
Jurkat-thyro.
HIV-1 Infection of H9 and Jurkat Cells
Transduced and untransduced H9 and Jurkat cells were infected at
a multiplicity of infection of 0.01-0.05 for 6 h at 37 °C, washed, and then cultured for up to 30 days. To monitor infection, aliquots were taken from the cultures at the indicated time points, and
the p24 levels were determined in an HIV-1 ELISA (Innotest).
PCR Analysis of HIV-1 Reverse Transcription
DNase-I-treated stocks of HIV-1NL4-3 or mutant
pHIV-1NL4-3 vif produced from parental Jurkat
and H9 cells and cells expressing anti-Vif scFv were used to challenge
1 × 106 H9 cells and PBMC in a volume of 1 ml. For
infection, a stock of 2 ng of soluble p24 antigen was used. The PCR
procedure to analyze reverse transcription was described previously
(28, 52). The primers used in this assay (M667/M661-LTR/gag,
nucleotides 496-695) amplify the late DNA products in reverse
transcription. Similar reaction conditions were used, except only the
24 h time point was analyzed. The products of all PCR reactions
were electrophoresed through 1.5% agarose gels, transferred to Hybond
N+ membranes (Amersham Biosciences), subjected to Southern
hybridization by using random-primed radiolabeled DNA probes (Amersham
Biosciences), and visualized by autoradiography. The DNA used for
radiolabeling were obtained following PCR amplification of segments of
pHIV-1NL4-3 or a human -globin expression vector with
the relevant primer pairs.
HIV Vector Stock Preparation
The stocks were prepared as described previously by transient
co-transfection of three plasmids into 293T cells: pRRL.SIN.I4BL, the
envelope plasmid pMD.G, and the packaging plasmid pCMV R8.91 (42-44). The p24 concentration was determined by antigen ELISA (Innotest). Vector production and gene delivery were done in a biosafety level 2 environment. The in vitro transduction
experiments were done in six-well plates (Nunc). Filtered
vector-containing medium was added 24 h after seeding PBMC (2 × 105 cells/well). When applicable, transduction of H9 and
Jurkat cells was also performed. The transduction protocol was repeated
two more times in the following 48 h. For the transduction, 100 ng of p24 was used. The multiplicities of infection were estimated by
assuming that 1 ng of p24 corresponds to 1000-5000 transducing units.
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RESULTS |
Selection of Vif-specific Antibody Fragments from a Phage Display
Chimeric Rabbit Fab Library--
A chimeric rabbit/human Fab library
was generated from cDNA derived from spleen and bone marrow RNA of
an immune rabbit that had a strong immune response to HIV-1 Vif (50).
The phagemid vector pComb3X was used, and an antibody library of 9 × 107 independent clones was constructed and
selected. Several Fab clones that bound to purified Vif protein were
isolated and studied. The relative binding affinities reported for each
of the Fab clones are summarized in Fig.
1. The analyzed clones showed some
sequence variation with conservation of sequence within some
complementarity determining regions (data not shown). One clone, J4,
bound strongly to Vif protein in ELISA and was chosen for further
characterization and expression.

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Fig. 1.
Relative binding affinities of anti-Vif Fab
antibody fragments. Isolated anti-Vif Fabs in a total of 96 clones
were expressed and used for binding to 200 ng of Vif protein. Fab
binding to antigen was detected by high affinity HRP-conjugated anti-HA
monoclonal antibody. A total of 16 clones with signals that were higher
than background were isolated. Background optical density signal
in all clones are less than 0.2. Fab J4 was chosen for further studies,
because its signal was more intense in several independent
experiments.
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Anti-Vif scFv Gene Expression in E. coli and in Vitro Interaction
with HIV-1 Vif--
The antibody fragment J4, that binds purified Vif
protein was derived from a Fab phage display library. To express it in
the cytoplasm in a lower molecular weight form, J4 Fab was converted to
a single-chain fragment. Anti-Vif scFv was constructed by PCR amplification of VL and VH fragments and covalently linked with a short
peptide linker of 7 amino acids (4B, GGSSRSS) and a long peptide linker
of 18 amino acids (4BL, SSGGGGSGGGGGGSSRSS). It was expected that the
short linker peptide would result in a dimeric scFv protein (33). To
determine whether the binding efficiency of recombinant scFv to the
HIV-1 Vif would correlate with those of the parental Fab clone, both
scFv 4BL and 4B were expressed in E. coli, and binding to
HIV-1 Vif was assessed by ELISA and Western blotting. Both 4B and 4BL
anti-Vif scFv, together with J4 Fab, were expressed in bacterial cell
culture supernatant and purified by Ni2+ affinity columns.
As the data in Fig. 2 demonstrate, 4B and
4BL scFv have different binding patterns. Binding of anti-Vif scFv prepared with a long linker (4BL) binds Vif protein in ELISA at similar
levels to Fab J4. In contrast, anti-Vif scFv prepared with a short
linker (4B) demonstrates comparatively a very low affinity. In
contrast, nearly background signals indicate very low nonspecific
binding of scFv 4BL to control proteins HIV-1 protease and bovine serum
albumin, a profile similar to that of Fab J4.

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Fig. 2.
Expression and relative binding affinities of
anti-Vif Fab and scFv. A, TOP 10 F bacteria expressing
anti-Vif 4 BL scFv (lanes 1 and 2), anti-Vif 4B
scFv (lanes 3 and 4), and Fab J4 (lanes
5 and 6) at 2 and 18 h, respectively, by induction
with 0.5 M
isopropyl- -D-thiogalactopyranoside at 25 °C. Antibody
fragments were expressed in the supernatant and precipitated by
trichloroacetic acid at indicated time points. The proteins were
immunoblotted by HRP-conjugated anti-HA monoclonal antibody.
B, bacteria culture supernatant expressing Fab J4, scFv 4BL,
and scFv 4B were used for evaluating relative binding affinities to 200 ng of Vif protein, HIV-1 protease, and bovine serum albumin by ELISA.
The results were measured by optical density at 405 nm. The data
represent the results of three independent experiments.
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The specificity of binding of anti-Vif scFv 4BL was next investigated
by immunoblotting and immunofluorescence (Fig.
3). Vif protein and HIV-1 protease were
separated by SDS-PAGE and probed with anti-Vif Fab J4 and recombinant
anti-Vif scFv 4BL. In the Western blot the major band of 23 kDa
corresponding to HIV-1 Vif was recognized strongly by the scFv 4BL and
Fab J4. The recombinant antibody fragment, as expected from the ELISA
results, did not recognize HIV-1 protease. Immunofluorescence studies
also show a specific recognition of Vif protein by anti-Vif Fab and
scFv 4BL (Fig. 3). Thus, in opposition to scFv 4B, Vif protein is
specifically recognized in vitro by scFv with a long
linker.

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Fig. 3.
Detection of antigens by Western blot and
immunofluorescence. A, 200 ng of purified HIV-1
protease (lane 1) and Vif protein (lanes 2 and
3) were separated by PAGE and transferred to nitrocellulose
membranes. For immunodetection, purified Fab J4 (lanes 1 and
2) and scFv 4BL (lane 3) was used, and
HRP-conjugated anti-HA monoclonal antibody was used as a secondary
antibody. B, detection of Vif protein expressed in
HeLa cells transfected with pSVLvif. The cells were fixed in
4% paraformaldehyde, washed in PBS, and immunostained with purified
anti-Vif Fab J4 (left panel) and scFv 4BL (center
panel). Nontransfected HeLa cells were stained with scFv 4BL
(right panel). High affinity FITC-conjugated anti-HA
antibody was used for detection of immunocomplexes. The display
settings in back image are approximately three times higher than
normal images to allow visualization of nontransfected cells; settings
identical to the experiment images produce a completely black
image.
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Cellular Expression of Anti-Vif scFv Co-immunoprecipitates Vif
Protein and Co-localizes with HIV-1 Vif in the Cytoplasm--
To
express the antibody fragments 4BL and 4B in the cytoplasm of human
T-lymphoid cells, an initiation codon was appended to the N terminus of
the proteins, and an HA epitope was maintained at the C terminus.
Expression plasmids were constructed in pCDNA3.1Neo (pI4BL and
pI4B). Because 4B scFv was unable to bind Vif protein in ELISA, we
anticipated that its expression in the cell would not effectively trap
Vif in the cytoplasm. As a control for the activity of scFv, the
antibody fragment anti-thyroglobulin (41) was cloned in the same
eukaryotic vector and expressed in the human T-lymphoid cells.
The efficacy of intrabody expression for binding HIV-1 Vif protein in
the cell was examined by co-immunoprecipitation and fluorescence
microscopy studies (Fig. 4). HeLa cells
were co-transfected with intrabodies and pSVLvif and then
lysed 48 h after transfections. The intrabody fragment I4BL was
immunoprecipitated with an anti-HA high affinity monoclonal antibody
and protein A magnetic beads. Cell lysis and immunoprecipitation were
carried out using mild detergent and salt conditions to allow
co-immunoprecipitation of binding proteins. Upon immunoprecipitation of
cells transfected with pSVLvif and pI4B, no Vif protein was
detected by Western blot, whereas co-transfection of pSVLvif
with pI4BL resulted in co-immunoprecipitation of Vif protein (Fig. 4).
This result is consistent with previous data in ELISA showing Vif
binding. As a control, anti-thyroglobulin scFv expressed in HeLa cells
did not bind Vif because this protein did not co-immunoprecipitate with
the antibody fragments (data not shown).

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Fig. 4.
Interactions of Vif and scFv 4BL.
A, transfected HeLa cells expressing scFv 4BL were stained
with high affinity FITC-conjugated anti-HA antibody (green
signal; panel 1) and Vif protein with anti-Vif
polyclonal serum plus rhodamine-conjugated anti-rabbit antibody
(red signal; panel 2) as described under
"Experimental Procedures." A different localization and punctated
pattern is observed for Vif and scFv 4BL when transfected separately.
B, transfected HeLa cells expressing Vif protein and scFv
4BL were stained with high affinity FITC-conjugated anti-HA antibody
(green signal; panels 1 and 4) and
anti-Vif polyclonal serum plus rhodamine-conjugated anti-rabbit
antibody (red signal; panels 2 and 5)
as described under "Experimental Procedures." A punctate pattern is
indicated with arrows, indicating possible immunocomplex
aggregates of Vif and scFv 4BL. In the majority of cells, the punctate
pattern was consistently observed in the cytoplasm. Overlay of
panels 1 and 2 and panels 4 and
5 results in a yellow signal at sites
of co-localization (panels 3 and 6).
Immunofluorescence microscopy was performed with the imaging setup
described under "Experimental Procedures" using the appropriate
excitation and emission filters. C, transfected HeLa cells
expressing Vif protein (lane 1), Vif protein and scFv 4BL
(lane 2), Vif protein and scFv 4B (lane 3), and
Vif protein and scFv anti-thyroglobulin (lane 4) were lysed
at 40 h with a low detergent buffer. The cell lysates with scFv
were immunoprecipitated with high affinity anti-HA antibody as
described under "Experimental Procedures." Nonimmunoprecipitated
lysate of Vif protein (lane 1) and immunoprecipitated
fractions were separated by PAGE (lanes 2-4). Western blot
was performed with anti-Vif polyclonal serum and HRP-conjugated
anti-rabbit antibody. Co-immunoprecipitation of Vif is observed with
scFv 4BL but is absent when scFv 4B and scFv anti-thyroglobulin are
expressed (lanes 3 and 4).
|
|
To evaluate the cellular localization of the antibody fragment I4BL
expressed together with the antigen Vif, intracellular staining of
co-transfected HeLa cells using an antibody specific to the HA tag and
a polyclonal serum against Vif was performed in HeLa cells (Fig. 4).
48 h after co-transfection with pI4BL and pSVLvif, HeLa cells were
fixed in paraformaldehyde and observed by fluorescence microscopy.
Microscopy showed a predominant punctate pattern of co-localization of
these two proteins in the cytoplasm, with nucleoplasm exclusion (Fig.
4). In addition, Vif was consistently detected in the nucleus, and scFv
was only observed in the cytoplasm in the majority of cells evaluated.
When Vif and scFv 4BL are expressed alone, its pattern of
localization is different from the co-localization staining. In
contrast, when anti-thyroglobulin scFv was expressed together with
anti-Vif scFv, no obvious co-localization was detected (data not
shown). These results demonstrate that Vif protein is specifically
recognized in the cytoplasm by the intracellular expression of anti-Vif
scFv and that its interaction co-localizes Vif and scFv 4BL throughout
the cytoplasm.
I4BL Inhibits Vif Function in a trans-complementation
Assay--
To provide a qualitative and quantitative measure of the
biological activity of the anti-Vif scFv, a transient complementation assay in nonpermissive cells was used to examine the abilities of the
anti-Vif scFv and control scFv to inhibit a single round of HIV-1
replication in trans (27). In a previous study, we showed
that the expression of Vif in trans in this assay restores the efficiency of a single round of replication of a
vif-defective virus to the wild-type level (15). The Vif
expresser plasmid is co-transfected with a vif-positive
(pHXB envCAT) or vif-negative env-defective (pHXB Avr envCAT) HXB2 provirus
plasmid that expresses CAT and an HIV-1 envelope expresser plasmid. The
HIV-1 virus particles produced in this assay result in only a single
round of infection, because the packaged viral genome is defective for
Env production. The efficiency of a single round of virus replication
is quantitated by measuring the level of CAT enzyme activity in the
infected cultures after 9-10 days, the minimum time for a detectable
signal above background. The ability of the anti-Vif scFv to inhibit a
single round of HIV-1 replication in trans was examined. In the absence of Vif, replication of the vif-negative virus
was ~10-fold lower than that of the vif-positive virus
(Fig. 5). Coexpression of I4BL scFv in H9
cells reduced trans-complementation to 15% of the wild-type
level, as shown in Fig. 5. In contrast, the expression of I4B scFv,
which does not bind Vif, caused a much less significant reduction in
trans-complementation to 85% of the wild-type level. Expression of anti-thyroglobulin scFv caused no significant reduction in trans-complementation. Thus, the biological activities of
the anti-Vif scFv correlated directly with their Vif binding activities in ELISA and co-immunoprecipitation assays, indicating that I4BL scFv
is likely to inhibit HIV-1.

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Fig. 5.
Neutralization of Vif function in a
trans-complementation assay. The values shown by
the black and white bars represent the
percentages of replication complementation in Jurkat and H9 cells,
respectively, relative to the value obtained for the wild type. The
cells were co-transfected with a wild-type Vif protein, scFv expressor
plasmids, either pHXB envCAT or pHXB Avr envCAT, and pSVIIIenv as
described under "Experimental Procedures." Replication
complementation for each testing plasmid was determined by the level of
chloramphenicol acetyltransferase activity in cells co-transfected with
pHXB Avr envCAT relative to that obtained with pHXB envCAT.
Background levels obtained when pSVIIIenv was not co-transfected were
8 ± 2%. The results shown are the means ± S.E. of three
independent experiments.
|
|
H9 Cells Expressing Vif-specific Intrabody I4BL Are Protected from
HIV-1 Infection--
The experiments described above examined the
biological activity of anti-Vif scFv in a transient assay under
conditions in which most virus transmission occurs by cell-to-cell
spread (15, 49). To investigate whether anti-Vif scFv can inhibit Vif
function during several rounds of HIV-1 replication, permissive
(Jurkat) and nonpermissive (H9) cell lines expressing intrabodies were generated. For these experiments recombinant murine leukemia virus (MLV)-derived retroviral vectors encoding anti-Vif intrabody
I4BL and control intrabody anti-thyroglobulin were used to transduce the human T cell lines H9 and Jurkat. Transduced cells were established through puromycin selection and limiting dilution cloning. Retroviral transduced cell lines were analyzed for intrabody and
anti-thyroglobulin expression by Western blot (Fig.
6). Intrabodies were also detected by
staining permeabilized transduced H9 and Jurkat cells with an anti-HA
antibody (data not shown). The resultant H9-I4BL and Jurkat-I4BL cell
lines showed homogeneous and stable expression of intrabody after
puromycin selection during at least 3 months in cell culture.
Subsequent studies on virus replication were performed in these
intrabody-expressing cell lines.

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Fig. 6.
Infection of permissive and nonpermissive
cell lines expressing anti-Vif intrabody. A, the
infectivity assays were started with HIV-1NL4-3 produced
after transfection of 293T cell lines with full-length proviral DNA.
Upper left panel, Jurkat and H9 cells infected with
HIV-1NL4-3 and HIV-1NL4-3 vif.
Upper right panel, Jurkat and H9 cells expressing
anti-thyroglobulin scFv infected with HIV-1NL4-3 and
HIV-1NL4-3 vif. Lower left panel,
Jurkat and H9 cells expressing anti-Vif scFv I4BL infected with
HIV-1NL4-3 and HIV-1NL4-3 vif.
Lower right panel, cell proliferation kinetics with WST-1
reagent. B, Western blot of cell lysates of Jurkat cells
expressing anti-Vif scFv I4BL and anti-thyroglobulin scFv (lanes
3 and 4) and cell lysates of H9 cells expressing
anti-Vif scFv I4BL and anti-thyroglobulin scFv (lanes 5 and
6). The lysates of Jurkat and H9 cells not expressing scFv
were also used in Western blot as negative controls (lanes 1 and 2).
|
|
Parental and transduced permissive and nonpermissive cell lines were
challenged with HIV-1 utilizing the highly cytopathic viral strain
HIV-1NL4-3. Infectivity assays were performed with an MOI
of 0.05 or 0.1 to mimic natural infections (35). Parental nontransduced
H9 and Jurkat cell lines supported vigorous replication of HIV-1, as
shown by the initial increases in HIV-1 p24 antigen, which peaked at
~14-20 days. In contrast, low levels of HIV-1 p24 antigen were
observed in the supernatants of H9-I4BL and Jurkat-I4BL as well as
parental cell lines infected with
HIV-1NL4-3 vif at early time points after
infection. On days 14-20 post-infection, H9-I4BL cells showed
~94-98% inhibition of HIV-1 p24 antigen production compared with
the parental H9 cells. Similar results were obtained in H9 cells
infected with HIV-1NL4-3 Vif. In contrast, at the same
time points of viral replication, Jurkat-I4BL cells showed similar
levels of HIV-1 p24 antigen production compared with parental Jurkat
cells. These results indicate that HIV-1 replication and infectivity
was dramatically reduced in nonpermissive H9 cells by expression of a
Vif-specific intrabody and were consistent in multiple independent
experiments. In addition, expression of control anti-thyroglobulin scFv
in the same cells had no significant inhibitory effect on HIV-1
replication, indicating that anti-Vif scFv is specific for Vif
inhibition in other nonpermissive cell lines (Fig. 6).
Previous studies have shown that intracellular antibody expression has
no obvious negative effects on cell viability or proliferation. Nevertheless, we quantified cell proliferation and cell viability of
transduced H9-I4BL and Jurkat-I4BL cells compared with parental cells.
The assay consists of a colorimetric assay based on the cleavage of the
tetrazolium salt WST-1 by mitochondrial dehydrogenases in viable cells
(Roche). The kinetics of the metabolism of WST-1 reagent showed that
H9-I4BL and Jurkat-I4BL cells have similar proliferation curves
compared with parental cell lines (Fig. 6). The evaluated time points
were the same as those used for p24 antigen detection. Therefore,
expression of anti-Vif single-chain antibody stably expressed in the
cell inhibits HIV-1 replication in multiple rounds of infection.
Proviral DNA Synthesis Is Impaired for Virus Produced from H9 Cells
Expressing I4BL Intrabody--
The synthesis of viral DNA in H9 cells
exposed to HIV-1NL4-3 produced from H9-I4BL and
Jurkat-I4BL cells was analyzed by PCR, with primers specific for
products of reverse transcription, as described previously (6, 28, 52).
Reverse transcription of retroviral RNA includes a series of steps,
beginning with the synthesis of the minus strand strong stop and
continuing with the elongation of this minus strand, with the final
product constituting the completed double-stranded DNA (30). The
M667/M661 primer pairs flank the primer-binding site and specifically
detect HIV-1 DNA within completed or nearly completed reverse
transcripts. To determine whether proviral DNA synthesis is impaired,
Jurkat-I4BL and H9-I4BL were co-cultured with 293T cells transfected
with HIV-1NL4-3, and virus was isolated 9 days later. H9
cells were incubated with the same amounts of virus normalized by
TCID50, and aliquots of the infected cultures were harvested and lysed. Total cellular lysates were then subjected to PCR analysis. The results
in Fig. 7 showed that late reverse
transcripts were significantly reduced in H9 cells infected with
HIV-1NL4-3 derived from H9 intrabody-expressing cells
(H9-I4BL). Completed or nearly completed reverse transcripts were
reduced to 5% of the viral infection originated with
HIV-1NL4-3 produced in H9 cells. PCR analysis was also
performed in H9 chronically infected cells after 12 days, and the
results were similar. These results show that infection of H9 cells
with virus derived from Jurkat-I4BL showed similar infection levels
compared with viruses produced in the absence of intrabody expression
(Fig. 7). In contrast, we demonstrate that HIV-1NL4-3
virus derived from intrabody-producing cells is defective for reverse
transcription.

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Fig. 7.
Proviral DNA synthesis is impaired for virus
produced from H9 cells expressing I4BL intrabody. The total cell
lysates were prepared from aliquots of 5 × 104 cells
and were subjected to PCR analysis with a primer pair specific for late
products of reverse transcription. A, H9 cells were
challenged with DNase-treated stocks of HIV-1NL4-3 derived
from H9 and Jurkat parental cells (lanes 1) and cells
expressing anti-Vif scFv I4BL (lanes 2).
HIV-1NL4-3 vif was also produced from H9 and
Jurkat cell lines and used as a control (lanes 3).
B, PHA-stimulated PBMC were challenged with similar viral
stocks as in A. C, H9 cells infected as in
A were subjected to PCR analysis with control primers for
-globin. A dilution series of H9 and PBMC was also subjected to PCR
amplification with the same primer pairs as in A and
B (right hand panels). These reactions were
performed within the semiquantitative range. All of the reaction
products were visualized by Southern hybridization and then by
autoradiography.
|
|
Inhibition of HIV-1 Viral Infectivity by Anti-Vif I4BL Is Specific
for Nonpermissive Cells--
Vif modulates HIV-1 infection in cultured
T-cell lines in a cell-dependent manner (2, 4, 6, 8, 9). To
evaluate the specificity of viral inhibition in different cell lines, a recombinant HIV-1 expressing I4BL or anti-thyroglobulin scFv in cis was generated. This recombinant HIV-1 was derived from
pHXBnPLAP-IRES-N+ by replacing the human PLAP gene by I4BL or
anti-thyroglobulin scFv, generating pHXB-I4BL and pHXB-thyro. In this
experiment, 293T cells were transfected, and a high titer supernatant
of HXB-I4BL, HXB-thyro and HXB2 vif was obtained. HIV-1
supernatants normalized for the same TCID50 were used to infect
permissive (Jurkat and SupT1), semi-permissive (CEM), and nonpermissive
cells (H9, U38, and PBMC), and their ability to replicate in these
cells was assessed by performing standard virus growth curves. Three
patterns of results were obtained (Fig.
8). All of the nonpermissive cells tested
in this experiment did not support the spread of HXB-I4BL. Similar
results were obtained with HXB2 vif. In contrast,
permissive cell lines supported replication of all viruses used in this
experiment. In CEM cells, replication of HXB-I4BL exhibited an
intermediate behavior, although in some experiments its replication was
higher than expected. As a control, HXB-thyro was able to replicate at wild-type levels in all cells tested (Fig. 8). HXB-I4BL was also co-cultivated with HIV-1NL4-3 in nonpermissive cells, and infection was monitored by p24 antigen production. In this co-culture experiment MOI of HIV-1NL4-3 were similar and five times higher than HXB-I4BL. Compared with infection of
HIV-1NL4-3 alone in nonpermissive cells, p24 antigen
production was dramatically reduced from 94 to 97% at similar MOI and
from 87 to 95% with higher MOI (data not shown). Thus, the HXB-I4BL
can control replication of wild-type virus. These results show that the
specificity of Vif inhibition by the intrabody correlates with the
cellular requirements for Vif function, confirming the specificity of
anti-Vif scFv.

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Fig. 8.
Cell-specific inhibition of HIV-1 replication
in presence of anti-Vif scFv. Replication of HIV-encoding anti-Vif
scFv I4BL and anti-thyroglobulin was assessed in permissive and
nonpermissive cells. In the left panels, permissive and
semi-permissive cells Jurkat, SupT1, and CEM cells, were infected with
HIV-I4BL (A) and HIV-thyro (B). In the
right panels, nonpermissive cells H9, U38, and
PHA-stimulated PBMC were infected with HIV-I4BL (C) and
HIV-thyro (D). Notice in the upper right panel
that the lower values of HIV-1 p24 concentration were measured. The
PBMC data were obtained with cells from three different HIV-1
seronegative donors. The data are representative of two independent
experiments.
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|
Inhibition of HIV Replication by Anti-Vif scFv in Transduced Human
PBMC--
To evaluate the potential of anti-Vif scFv for clinical
application, PHA-stimulated human PBMC were transduced with a
retroviral vector that expresses anti-Vif scFv I4BL. Lentiviruses are
attractive vectors for gene therapy because of their ability to
integrate into nondividing cells (42, 43, 44). The retroviral vectors used in this study are derived from the HIV SIN system described previously by Naldini et al. (42). This delivery
system has been shown to be highly effective in transduction of primary
cells and offers significant advantages for its predicted biosafety (42). Intrabodies were cloned in the self-inactivating vector pRRL.SIN
and expressed under the cytomegalovirus promoter. Replication-defective retroviral particles were generated by transient co-transfection of
293T human kidney cells with the combination of three plasmids as
described under "Experimental Procedures." The p24 antigen concentration was determined, and the amount corresponding to 100 ng
was used to transduce PBMC. The transduction protocol consisted of the
daily infection of stimulated human PBMC with fresh 100 ng of viral p24
supernatants for 3 days, leading to transduction efficiencies, as
measured by anti-HA immunofluorescence, ranging from 40 to 48% for
three different experiments. The efficiency of transduction was
significantly higher then previous experiments with MLV vectors,
which may reflect the higher capability of HIV-based vectors for
infecting human cells.
PBMC were challenged with HIV-1NL4-3 and two clinical
isolates of HIV-12 in the
range of MOI 0.05-0.1. Fig. 9 shows a
dramatic inhibition of HIV-1NL4-3 production by anti-Vif
I4BL transduction. Similar values of inhibition are obtained for the
HIV-1 clinical isolates. In contrast, HIV-1 replication in PBMC
transduced with anti-Vif I4B and anti-thyroglobulin showed less
inhibition or no inhibition, respectively. These results show the
potential for anti-Vif scFv for inhibiting HIV-1 replication in primary cells by ex vivo transduction.

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Fig. 9.
Inhibition of HIV infection by transduction
with an HIV-derived retrovector encoding anti-Vif scFv. Purified
PBMC from three different HIV-1/HIV-2 seronegative donors were
PHA-stimulated and transduced with SIN18-I4BL using the protocol
described under "Experimental Procedures." Left panel,
nontransduced PHA-stimulated PBMC were infected with
HIV-1NL4-3 (MOI = 0.05-0.1); two HIV-1 clinical
isolates (strain Ac178 and strain Je524, Prof. H. L., Faculdade de
Farmácia de Lisboa), 1 ng of HIV-1 p24 antigen/106
PBMC. Right panel, transduced PHA-stimulated PBMC was
challenged with similar HIV strains as in the left panel.
The data are representative of at least two sets of independent
experiments.
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|
 |
DISCUSSION |
The action of Vif is essential for the completion of proviral DNA
synthesis after virus entry, most likely as a result of its effect
during virus production (6, 25, 28). ScFv-based strategies directed
against Vif may be an effective approach to inhibit these two crucial
steps of the viral replication cycle (36-38). The genetic approach
described here abrogates viral infectivity and reverse transcription by
functional deletion of Vif, thereby inhibiting HIV-1 replication prior
to integration of viral DNA in the host genome. We showed that anti-Vif
scFv binds to Vif in the cytoplasm. We also showed that scFv
co-immunoprecipitates Vif, probably because of its high affinity.
Anti-Vif scFv expressed transiently, constitutively, or by retroviral
transduction abrogated viral replication in primary human
T-lymphocytes. Wild-type viral particles produced from nonpermissive
cells expressing anti-Vif scFv have a defect in infectivity at the
level of reverse transcription because of neutralization of Vif in
trans. These results confirm previous studies demonstrating
that Vif acts in the producer cell and affects virus assembly.
Consistent with this model, the expression of anti-Vif scFv in target
cells had no effect on the infectivity of wild-type HIV-1.
The transducing vector used in this study was derived from HIV-1 (42,
43, 44), which can transduce dividing and nondividing human
T-lymphocytes. Comparative studies using a vector derived from
MLV demonstrated that the HIV-derived vector is more efficient at protecting human T-lymphocytes from HIV infection (data not shown).
The effectiveness of neutralization was assessed by challenging intrabody-transduced PBMC with an HIV-1 laboratory-adapted strain and
HIV-1 primary isolates. The Vif epitope recognized by the 4BL intrabody
may be dominant, because it neutralizes both laboratory adapted and
primary HIV-1 strains. Effective intracellular immunization must be
designed for highly divergent proteins that share only a few peptide
motifs because HIV-1 rapidly evolves compensatory mutations in response
to selective pressures. Extended in vitro challenge with
HIV-1 is necessary to determine whether Vif will acquire escape
mutations associated with resistance.
Vif is predominantly localized in the cytoplasm of infected cells. A
small fraction is localized in the nucleus, reflecting a possible role
of Vif in this compartment. Our results show that scFv expressed in the
cytoplasm co-localizes with Vif. Thus, the result of our study predicts
that the cytoplasm is where Vif functions during HIV-1 replication.
The requirement for Vif differs among cell lines (2, 4, 6, 8, 9).
Recent studies suggest that Vif enhances infectivity by overcoming an
inhibitory factor present in nonpermissive cells (53, 54). When
anti-Vif scFv was cloned in HIV-1 in place of the nef gene,
viral replication occurred only in permissive cells, whereas in
nonpermissive cells replication was similar to vif-negative
HIV-1. The activity of the anti-Vif intrabody was shown to be
cell-specific, because in cis and in trans it had
inhibitory effects only in nonpermissive cells. Anti-Vif scFv will help
to validate candidates for HIV-1 cell-specific inhibitors that can be
neutralized by Vif (20, 54).
The results presented here extend previous studies demonstrating that
high affinity single-chain antibodies can be stably expressed in the
cytoplasm (31, 34, 36, 35, 37). Folding of the scFv in the reducing
environment of the cytoplasm can form functional binding sites as
demonstrated by co-immunoprecipitation. Furthermore, the toxicity of
the scFv was low as assessed by cell viability in intrabody-expressing
human T-lymphocytes. We constructed a single-chain antibody by ligating
VL with VH using a short and long linker. It was anticipated that a
short linker peptide would result in a dimer scFv with two sites for
antigen binding (33). Nevertheless, we observed a lack of binding of
the 4B antibody. The reason for this result might be reduced stability
or folding yield at the growth temperature. The short linker peptide
may inhibit the coherent structure of the framework regions, thereby altering the binding affinity.
A large panel of scFvs against Vif is being constructed to
map epitope-binding regions and putative functional sites. Using a
panel of anti-Vif scFvs directed to specific intracellular sites, it
may be possible to gain novel insights into Vif function. In addition,
this strategy will facilitate the development of rational combinatorial
gene therapies that simultaneously target different functional motifs.
 |
ACKNOWLEDGEMENTS |
We thank Didier Trono for providing the
pRRL.SIN.I4BL, pMD.G, and pCMV R8.91 plasmids, Greg Winter for
providing pHEN-Thyroglobulin, and Prof. Helena Lourenço
(Faculdade de Farmácia de Lisboa, Portugal) for providing HIV-1
primary strains. HIV-2ROD,
pHIV-1NL4-3 vif, and HIV-1NL4-3
and HIV-1 Protease were obtained from the AIDS Research and Reference
Reagent Program.
 |
FOOTNOTES |
*
This work was supported by Fundação para a
Ciência e Tecnologia Grant POCTI/33096/MGI/2000, by funds from
the Comissão Nacional de Luta Contra a SIDA, and by National
Institutes of Health Grant AI 37470 (to C. F. B.).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
b
To whom correspondence should be addressed: Faculdade de
Farmácia de Lisboa. URIA-Centro de Patógenese Molecular.
Av. Das Forças Armadas, 1649-019 Lisboa, Portugal. Tel.:
351-21-7946489; Fax: 351-21-7934212; E-mail:
joao.goncalves@ff.ul.pt.
c
Supported by a Bolsa de Investigação
Científica from Fundação para a Ciência e Tecnologia.
d
Recipient of a doctoral fellowship from Fundação
para a Ciência e Tecnologia.
h
Supported by National Institutes of Health Grant AI 36186 and an Elizabeth Glaser Scientist Award from the Pediatric AIDS Foundation.
Published, JBC Papers in Press, May 30, 2002, DOI 10.1074/jbc.M201906200
2
M. H. Lourenço, personal communication.
 |
ABBREVIATIONS |
The abbreviations used are:
HIV-1, human
immunodeficiency virus, type 1;
HIV-2, human immunodeficiency virus,
type 2;
VL, light chain variable region;
VH, heavy chain variable
region;
scFv, single-chain antibody fragment;
ELISA, enzyme-linked
imunosorbent assay;
PBMC, peripheral blood mononuclear cells;
PHA, phytohemagglutinin;
HRP, horseradish peroxidase;
FITC, fluorescein
isothiocyanate;
HA, hemagglutinin;
CAT, chloramphenicol
acetyltransferase;
PBS, phosphate-buffered saline;
MOI, multiplicity of
infection;
PLAP, placental alkaline
phosphatase.
 |
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