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J. Biol. Chem., Vol. 277, Issue 38, 34692-34699, September 20, 2002
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From the Department of Medical Microbiology, Lund University,
University Hospital Malmö, S-205 02 Malmö, Sweden
Received for publication, April 22, 2002, and in revised form, July 2, 2002
Moraxella catarrhalis IgD-binding
protein (MID), a 200-kDa outer membrane protein comprising 2,139 amino
acids, has recently been isolated and shown to display a unique and
specific affinity for human IgD. To identify the IgD-binding region,
MID was digested with proteases. In addition, a series of truncated
fragments of MID were manufactured and expressed in Escherichia
coli followed by analysis for IgD binding in Western and dot
blots. The smallest fragment with essentially preserved IgD binding was
comprised of 238 amino acid residues (MID962-1200).
Shorter recombinant proteins gradually lost IgD-binding capacity, and
the shortest IgD-binding fragment comprising 157 amino acids (MID985-1142) displayed a 1,000-fold reduced IgD binding
compared with the full-length molecule. The truncated
MID962-1200 was efficiently attracted to a standard IgD
serum and to purified myeloma IgD( Nonimmune Ig-binding proteins derived from Gram-negative bacteria
are rare compared with Ig-binding proteins from Gram-positive bacteria.
However, Brucella abortus interacts with bovine IgM (1) and
Haemophilus somnus with IgG-Fc (2), and some strains of
Escherichia coli exhibit IgG binding in a nonimmune manner (3). In addition, Haemophilus influenzae and Moraxella
catarrhalis have been shown to strongly bind human IgD (4). It has
also been demonstrated that M. catarrhalis and H. influenzae activate human B cells through interactions with
surface IgD (5). We have recently purified and characterized a 200-kDa
outer membrane protein from M. catarrhalis
designated Moraxella IgD-binding protein (MID)1 (6). The deduced amino
acid sequence of MID consists of 2,139 residues. MID has specific
IgD-binding properties and interacts with two purified human IgD
myeloma proteins, four IgD myeloma sera, and one IgD standard serum. In
contrast, no binding is detected to myelomas of other immunoglobulin
classes including IgG, IgM, IgA, and IgE. MID also binds to the
surface-expressed B cell receptor (BCR) IgD but not to other membrane
molecules on human peripheral blood lymphocytes. Furthermore, MID is
mitogenic for purified B cells and induces Ig production in the
presence of Th2 cytokines (7).
IgD is a unique immunoglobulin, which was first discovered
in 1965 by Rowe and Fahley (8). Because soluble IgD is easily degraded
by proteolytic enzymes and therefore difficult to purify, the specific
role of IgDs has not yet been completely defined (9). Soluble IgD
represents approximately 0.25% of the total serum immunoglobulins. In
contrast, cell surface-bound IgD serves as an antigen BCR and is
co-expressed with IgM on mature B lymphocytes. Interestingly, an
increased number of IgD molecules has been observed in human
bronchus-associated lymphoid tissue and tonsils (10), suggesting a
possible interaction between the immune system and the IgD-binding
respiratory pathogens M. catarrhalis and H. influenzae (4, 6).
In the present study, we show that a recombinant protein corresponding
to a 238-amino acid sequence between positions 962 and 1200 of MID
essentially has a preserved IgD-binding capacity on a molar basis
compared with the fully intact MID1-2139
molecule. The truncated protein formed a tetramer as revealed by gel
electrophoresis and ultracentrifugation analyses. The tetrameric molecule bound IgD more than 20-fold efficiently compared with the
monomeric counterpart.
Reagents--
M. catarrhalis Bc5 was a clinical
isolate from a nasopharyngeal swab culture obtained from our department
(6). E. coli DH5 Peptide Cleavage of MID and Amino Acid Sequence
Analysis--
MID was isolated and purified from M. catarrhalis Bc5 as described previously (6). Native MID in 0.05 M Tris-HCl (pH 8.8) containing 0.1% Empigen®
was digested with trypsin or chymotrypsin at an enzyme/protein ratio of
1:10 at 37 °C overnight or with Endoproteinase LysC at an
enzyme/protein ratio of 1:50 (Sigma) at 30 °C overnight. The digestion mixtures were run on SDS-PAGE, and protein bands were then
transferred electrophoretically to Immobilon-P membranes (Millipore,
Bedford, MA) and analyzed for IgD binding. The fragments were sequenced
with an Applied Biosystems (Foster City, CA) 470A gas-liquid-solid-phase sequenator (11). The resulting sequences were
for trypsin TAQANTESSIAVG, GNTATNFSVNSGDDNALIN, and
QGINEDNAFVKGLEK, and for chymotrypsin PSTVKADN. When MID was digested
with LysC, the sequence MID533-1172 was obtained by mass
spectrometry (12).
DNA Cloning and Protein Expression--
All truncated MID
constructs were manufactured using PCR-amplified fragments.
Taq DNA polymerase was from Roche Molecular Biochemicals, and PCR conditions were as recommended by the
manufacturer. The open reading frame of the mid gene from
M. catarrhalis (pET26-MID) was used as template (6). All MID
constructs, expect for MID367-590 (fragment C), were
amplified by PCR using specific primers introducing the restriction
enzyme sites BamHI and HindIII. Because fragment C has an internal HindIII site, an XhoI was used
instead of HindIII at the 3'-end. The PCR products were
cloned into pET26b(+), except for fragment I, which was cloned into
pMAL-c2. To avoid presumptive toxicity, the resulting plasmids were
first transformed into the host E. coli DH5
To produce recombinant proteins, bacteria were grown to mid-log phase
(OD600 0.5-1.0) followed by 3.5 h of induction with 1 mM isopropyl-1-thio- Gel Electrophoresis and Detection of Proteins on Membranes
(Western Blot)--
SDS-PAGE (12%) was run as described previously
(6). Samples of purified proteins were also mixed with Tris-HCl sample
buffer (pH 8.8) at room temperature and run at native conditions in
Tris-HCl PAGE (7.5%) in Tris-glycine native running buffer (pH 8.3) at 150 constant voltage using running and blotting instruments from Bio-Rad. Gels were stained with Coomassie Brilliant Blue R-250 (Bio-Rad). In parallel, the proteins were electrophoretically transferred (30 V for 2-3 h) from a gel to an Immobilon-P membrane (Millipore). Gels with full-length MID were blotted at 30 V overnight. After transfer, the membrane was blocked with 5% milk powder in PBS
with 0.1% Tween 20 (PBS-Tween) for 2 h. After four washings in
PBS-Tween, the membrane was incubated with IgD myeloma serum (0.5 µg/ml human IgD- Dot Blot Assays--
Purified MID-derived proteins diluted in
4-fold steps in 100 µl of 0.1 M Tris-HCl (pH 9.0) were
manually applied to nitrocellulose membranes (Schleicher & Schüll, Dassel, Germany) using a dot blot device. To compare the
truncated proteins with each other and with full-length MID, the same
amount on a molar basis was added to the membranes. After a 1-h
incubation at room temperature, membranes were treated as the Western
blot membranes. In separate experiments, the strongly IgD-binding
recombinant protein MID962-1200 was diluted in 4-fold
steps and applied to membranes. After blocking, the lanes were
separated and incubated with different human myeloma sera (2.8 µg
with reference to Ig) for 1 h, followed by four washes and
incubation with anti-human Enzyme-linked Immunosorbent Assay (ELISA)--
The interaction
between IgD and the truncated MID-derived proteins was also tested in
ELISA. Microtiter plates (F96 Maxisorp, Nunc-Immuno Module;
Roskilde, Denmark) were coated with an IgD myeloma serum (8 µg
of IgD( Flow Cytometry--
Human peripheral blood lymphocytes (PBLs)
were isolated from heparinized blood by Lymphoprep (Nycomed; Oslo,
Norway) density-gradient centrifugation. Flow cytometric analyses were
performed as described previously (6). Briefly, recombinant
MID962-1200 (fragment F2, 5 mg/ml) in PBS adjusted with
0.1 M carbonate buffer to pH 9.2, was incubated with 0.15 µg/ml FITC solubilized in DMSO. After 45 min at room temperature and
constant stirring, the sample was diluted and subjected to a PD10
column (Amersham Biosciences) pre-equilibrated with PBS, pH 7.4. The
resulting MID962-1200-FITC was used for binding studies.
10 µg of the labeled fragment was incubated with PBLs in 100 µl of
PBS containing 1% fetal calf serum on ice for 30 min followed by
incubation with specific RPE-conjugated anti-human CD19 mAbs. In
blocking experiments, the PBLs were preincubated with 30 µg of
anti-human IgD-Fab polyclonal antibodies for 30 min on ice and were
thereafter incubated with recombinant MID962-1200 protein
and RPE-conjugated anti-human CD19 mAbs. After final washes, the
samples were analyzed in an EPICS XL-MCL flow cytometer (Beckman
Coulter, Hialeah, Florida).
Ultracentrifugation--
Sedimentation equilibrium analysis was
performed in a Beckman Optima XL-A analytical ultracentrifuge equipped
with absorbance optics, using an An50Ti rotor. MID962-1200
was equilibrated in PBS buffer, whereas 0.1 M
NH4HCO3 containing 0.5% Empigen®
was used for native purified MID. Short column experiments were performed at two consecutive speeds (9,000 and 11,000 rpm). After sedimentation equilibrium was reached, absorbance scans were taken with
0.001-cm step size, 8 averages, at appropriate wavelengths (231, 236, 280, or 286 nm). Six-hole centerpieces of charcoal-filled Epon (12-mm
optical path) were used, and the equilibrium temperature was 20 °C.
High-speed sedimentation at 48,000 rpm was conducted afterward for
baseline correction. Estimates of the buoyant molar mass of the protein
were determined by fitting a sedimentation equilibrium model for a
single sedimenting solute to individual data sets with the program
EQASSOC (13). These values were converted to the corresponding average
molar masses using the partial specific volume calculated from the
amino acid composition of the protein (14). Several models of
self-association were globally fitted to multiple sedimentation
equilibrium using the MULTEQ3B software (kindly supplied by Dr.
Allen Minton, National Institutes of Health, Bethesda, MD).
Mutation Generation Using Transposons--
Five extra amino
acids were randomly inserted into the IgD-binding region of MID
(fragment F2, MID962-1200) using the Mutation Generation
System (Finnzymes, Espoo, Finland) according to the manufacturer's
instructions. Because the pET26b(+) vector has an internal
NotI site, MID962-1200 was first subcloned into
pUC18 (CLONTECH, Palo Alto, CA) using the
restriction enzyme sites BamHI and HindIII. The
artificial transposon Entranceposon was inserted with an
in vitro transpositon reaction catalyzed by a single
purified MuA transposase. The transposition reaction
proceeded for 1 h at 30 °C followed by transformation of HB101
(Bio-Rad) by electroporation. Since the Entranceposon codes
for chloramphenicol resistance the clones could easily be selected.
After plasmid preparation (Qiagen, Hilden, Germany), the insert was
digested with BamHI and HindIII and separated by agarose gel electrophoresis. The inserts containing the
Entranceposon were further cloned into pUC18 followed by
transformation into DH5 Protein Structure Analysis--
The secondary structure of
the MID962-1200 (F2) fragment was predicted using a
software at the home page for Computational Genomics Group
(http://genomic.sanger.ac.uk/) (15).
Protease Digestion of MID Indicates the Localization of the
IgD-binding Region--
In a previous paper, we demonstrated that MID
specifically binds human IgD (6). To investigate which part of MID
interacts with IgD, native MID isolated from M. catarrhalis
strain Bc5 was digested with trypsin, chymotrypsin, or LysC. The
protein mixtures were applied to SDS-PAGE and transferred to membranes
followed by incubation with IgD and HRP-conjugated anti-IgD polyclonal antibodies. Several bands of different molecular weights were obtained.
After amino acid sequencing, individual positions in MID could be
discerned (Fig. 1A).
Trypsin digestion resulted in a 40-kDa IgD-binding band and 35- and
80-kDa bands that did not interact with IgD. Furthermore,
chymotrypsin treatment resulted in, inter alia, a 25-kDa
non-IgD-binding band, whereas digestion with LysC gave, among others, a
66-kDa IgD-binding band. Sequencing of the 66-kDa MID fragment
confirmed the position of the IgD-binding sequence by analogy with the
trypsin-derived 40-kDa band. These initial experiments thus indicated
that an IgD-binding region was located approximately between amino
acid residues MID864 and MID1172.
IgD Binding Is Preserved in 238 Amino Acids of MID--
To
determine in more detail the MID IgD-binding region, 11 sequences
derived from the full-length MID were cloned and expressed in E. coli. The recombinant proteins covered the entire MID sequence, and the individual lengths and positions were as shown in Fig. 1B. The recombinant proteins comprising amino acid residues
69-1111 (void of the signal peptide) or 1011-2139 of MID did not bind IgD as revealed in Western and dot blots. In contrast, the protein MID902-1200 (protein fragment F1) attracted IgD, strongly
suggesting that the single IgD-binding region of MID was within that
particular sequence.
To pinpoint the sequence responsible for the IgD binding,
the truncated MID902-1200 was systematically shortened at
the N- and C-terminal ends (Fig. 2).
Equimolar concentrations of the various recombinant proteins were
compared with native full-length MID1-2139 isolated from
M. catarrhalis. The different recombinant proteins were
diluted in 4-fold steps, added to membranes, and incubated with human
IgD. On a molar basis, an essentially preserved IgD-binding capacity
was detected for the truncated MID protein stretching from amino acid
residue 962 to 1200. The shortest truncated protein still
interacting with IgD was localized between MID985 and
MID1142 (fragment F6). The IgD binding property was lost
when the N terminus was reduced to the MID1000 residue
(fragment F4) or when the C-terminal was shortened to MID1130 (fragment F7). Finally, fragment F8
(MID902-1130), with a longer N-terminal and a shorter
C-terminal (compared with MID985-1200, fragment F3), was
also manufactured and analyzed. However, this truncated MID did not
interact with IgD, suggesting that the binding capacity was depending
on a longer C-terminal.
To further characterize the specific MID-dependent IgD
binding, an ELISA was constructed using human IgD as bait. All
of the recombinant truncated MID fragments were subjected to ELISA
followed by incubation with a specific rabbit anti-serum directed
against MID902-1200. The ELISA was developed using
HRP-conjugated goat anti-rabbit polyclonal antibodies. The same pattern
as with the dot blot (Fig. 2) was observed, i.e. fragments
F4, F7, and F7 were not attracted to the solid-phase IgD, whereas the
other fragments bound to a variable degree compared with full-length
MID (not shown).
Native MID and the Truncated MID962-1200
Are Tetramers as Shown by Sedimentation Equilibrium Analysis and Gel
Electrophoresis--
In a previous publication, we estimated with
chromatography and SDS-PAGE that native MID is aggregating and exists
as an oligomer (6). To confirm these results, a sedimentation
equilibrium analysis on MID was performed. Purified MID, which was
solubilized in the detergent Empigen® (0.5%), was
subjected to gradient centrifugation at two different speeds in an
ultracentrifuge supplied with absorbance optics. An apparent molar mass
of ~1,000 kDa was obtained, and it is concluded that native MID forms
an oligomer.
In addition to full-length MID, we subjected the truncated
MID962-1200 (F2) to a sedimentation equilibrium analysis.
The data obtained were compared with the calculated values for a
tetramer or dimer. The experimental gradient for
MID962-1200 protein (27 µM) as well as the
theoretical ones for dimer and tetramer species are shown in Fig.
3A. The predominant
MID962-1200 species sedimented at equilibrium with an
average molecular mass of 110 ± 3 kDa. This was compatible with a
protein tetramer because MID962-1200 including a histidine
tag has a molecular mass of 27 kDa as calculated from the amino acid
composition. To analyze the putative quaternary structure of
MID962-1200 (F2) for IgD binding, the recombinant protein
was subjected to analysis in gel electrophoresis under native
conditions. In addition, a corresponding IgD Western blot analysis was
performed. MID962-1200 migrated as a protein with an
apparent molecular mass of ~100 kDa in the native gel (Fig.
3B), confirming the ultracentrifugation experiments. Thus,
in addition to the sedimentation equilibrium analysis, the experiment
with the native gel suggested that MID962-1200 in its
native form was a tetramer consisting of four molecules. Furthermore,
using native conditions, the tetrameric structure of
MID962-1200 strongly bound IgD (Fig. 3B).
Optimal MID962-1200-IgD Interaction Is
Dependant on Tetramer Structure--
To further shed light upon the
need for a tetramer structure to obtain an optimal IgD binding,
MID962-1200 (F2) was incubated at 60 or 100 °C followed
by analysis on SDS-PAGE and Western blots. MID962-1200
formed both a monomer and a tetramer after pretreatment at 60 °C
(Fig. 4A). The tetrameric
structure was, however, disrupted at 100 °C and resulted in a
monomeric form, which displayed a considerably weaker binding to IgD
when examined in Western blots (Fig. 4, A and B).
To investigate the capability of the tetramer to bind IgD in comparison
with the monomeric form, the MID962-1200 fragment was
subjected to analysis at 60 °C in six different experiments. The
heat-treated protein was subjected to SDS-PAGE, and the IgD binding
activity was analyzed by Western blots. Resulting gels and filters were
analyzed by densitometry, and the protein concentration (density) of
the monomer was divided with the corresponding tetramer concentration.
The obtained value (%) was related to the concentration (µg) of
total protein loaded on the gels. Interestingly, when IgD binding to
the tetrameric respectively monomeric forms were compared, a 23-fold
more efficient binding to IgD was found with the tetrameric
MID962-1200 (Fig. 4C).
The Specific IgD Binding of MID962-1200 (F2) Includes
MID962-1200 (F2) Specifically Binds to Human IgD and
Is Attracted to the IgD BCR--
Full-length MID1-2139
attracts human IgD but not immunoglobulins from the other subclasses
(6). To verify the specificity of the interaction between IgD and
recombinant MID962-1200, a dot blot experiment was
performed. The membrane was coated with the truncated MID protein
followed by incubation with IgD, IgG, IgM, or IgA myeloma sera. As
shown in Fig. 6, MID962-1200
interacted with the three IgD myeloma sera, whereas
MID962-1200-dependent binding was not detected
to myeloma sera representing the IgG, IgM, or IgA subclasses.
The next step was to investigate whether truncated MID also was
attracted to membrane-bound IgD, i.e. the IgD BCR.
MID962-1200 was conjugated to FITC followed by incubation
with purified PBLs. In parallel, cells were labeled with RPE-conjugated
anti-CD19 monoclonal antibodies. After washes, PBLs were subjected to
flow cytometry analysis. Interestingly, FITC-conjugated
MID962-1200 significantly bound to the CD19+ B
lymphocyte population (Fig.
7B). To ensure that
MID962-1200-FITC specifically interacted with the IgD BCR,
PBLs were also preincubated with anti-human IgD-Fab polyclonal
antibodies. As seen in Fig. 7C, the
MID962-1200-FITC-dependent IgD binding was
completely abolished when the IgD BCR was blocked by anti-IgD-Fab pAb.
These results were in agreement with the previously published data on
full-length MID (6).
The novel outer membrane protein MID from M. catarrhalis recently has been identified and shown to display a
strong and specific affinity for human IgD (6). In the present paper,
we use proteolytic fragments of MID and recombinantly expressed
proteins to demonstrate that the IgD binding was essentially preserved
in a truncated recombinant protein located between amino acid residues
962 and 1200 of MID (Fig. 2). The molecular mass of the smallest
protein still binding IgD comprised 157 amino acids. The IgD-binding
capacity of the recombinant proteins was related to individual lengths, i.e. the binding decreased dramatically with the length.
This may be because the binding is highly dependant on a specific
molecular structure of the IgD-binding region. This hypothesis was
further strengthened by our ultracentrifugation and gel electrophoresis experiments. We have shown previously that native MID isolated from
M. catarrhalis, in addition to the 200-kDa band, forms a band that seemingly is an oligomer with a molecular mass of ~1,000 kDa in SDS-PAGE (6). When purified MID solubilized in the detergent Empigen® (0.5%) was analyzed by ultracentrifugation, an
apparent molecular mass of ~1,000 kDa was observed. This molecular
mass was consistent with a tetramer of MID in the presence of
Empigen®. The smallest truncated MID protein
(MID962-1200, fragment F2) with an essentially preserved
IgD binding activity (compared with full-length MID) and which could be
analyzed by ultracentrifugation in the absence of detergent was shown
to be a tetramer under native conditions. Interestingly, when
tetrameric and monomeric forms of MID962-1200 were
separated by SDS-PAGE and analyzed for IgD binding, the tetramer was
shown to attract IgD >20-fold more efficiently compared with the
monomeric form. Thus, the tetrameric structure was considerably more
active compared with the monomer. We cannot fully exclude, however,
that the monomeric protein was completely unreactive because it may
refold to a tetrameric structure during the blotting process.
The MID region required for IgD binding is large compared
with other bacterial surface proteins that bind immunoglobulins. Nonimmune Ig binding activity was first observed in
Staphylococcus aureus with the discovery of protein A that
attracts IgG (16). Protein A interacts with the Fc part of IgG, but
only with subclasses 1, 2, and 4 (17). In addition, protein A binds a
fraction of Ig molecules of all classes because of so-called
alternative binding to the variable heavy chains (18). Protein A
is a 45-kDa protein composed of five extracellular domains as tandem
repeats and an additional transmembrane domain. Each of the
extracellular domains consists of 58-61 amino acids. When one of the
domains (D) were cloned and expressed in E. coli,
it was discovered that this small protein exhibited both the VH3 Fab-
and Fc-binding specificities (19). In addition, competition ELISA
showed that VH3 binding of this single domain did not interfere with Fc
binding or vice versa. In contrast to protein A, protein G
found in group C and G streptococci binds with high specificity to all
human subclasses of IgG Fc (20). The smallest synthetic peptide of
protein G still binding IgG Fc derived from the C-terminal region is
only 11 residues long and corresponds to amino acid residues 34-44 in
the C1 domain (21). However, partly in parallel with our results with
MID, the C1 domain in itself exhibits weaker binding compared with
protein G as a whole (22).
Protein L derived from Peptostreptococcus magnus
binds to Certain structural features may contribute to optimal
MID902-1200-dependent IgD binding and
can be dissected into three possible factors: i) the intrinsic binding
capacity of monomers to bind IgD; (ii) oligomerization, independent of
binding activity; and (iii) new determinants formed as a result of
oligomer formation that contribute added binding avidity. The fact that
IgD binding to truncated MID proteins requires 157 amino acid residues
or more does not necessarily mean that all of those amino acids are
involved in the IgD binding. However, when we randomly introduced five
amino acid residues using transposons, the extra amino acids in two different sequence stretches completely abolished IgD binding. No
similarities between the two amino acid stretches were found. The
transposon results support together with the ultracentrifugation experiments that the overall tetrameric structure of the molecule is of
high importance for the IgD interaction. Taken together, our
data suggest that the tetramer formation of MID962-1200
results in the formation of new determinants maximizing the binding avidity.
In conclusion, we have shown that the IgD-binding region of the MID
protein comprises a 238-amino acid long sequence that is not repeated
in MID. Furthermore, tetramer formation is of fundamental importance
for optimal IgD binding.
We thank Marta Brant for excellent
technical assistance, Drs. Germán Rivas and Carlos Alfonso
(Servicio de Ultracentrifuga Analítica, Centro de
Investigaciones Biológicas, Madrid, Spain) for
ultracentrifugation analyses, and Drs. Bo Ek and Håkan Larsson (Swedish University of Agriculture Sciences, Uppsala, Sweden) for mass
spectrometry analyses.
*
This work was supported by grants from the Alfred
Österlund Foundation, the Anna and Edwin Berger Foundation, the
Crafoord Foundation, the Greta and Johan Kock Foundation, the IngaBritt and Arne Lundberg Foundation, the Magnus Bergvall Foundation, the
Swedish Medical Research Council, the Swedish Society of Medicine, the Åke Wiberg foundation, and the Cancer Foundation at the
University Hospital in Malmö.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
Published, JBC Papers in Press, July 10, 2002, DOI 10.1074/jbc.M203858200
The abbreviations used are:
MID, Moraxella IgD-binding protein;
BCR, B cell receptor;
PBL, peripheral blood lymphocyte;
HRP, horseradish peroxidase;
pAb, polyclonal antibody;
mAb, monoclonal antibody;
PBS, phosphate-buffered saline;
ELISA, enzyme-linked immunosorbent
assay;
FITC, fluorescein isothiocyanate;
RPE, R-phycoerythrin.
The Immunoglobulin D-binding Part of the Outer Membrane Protein
MID from Moraxella catarrhalis Comprises 238 Amino
Acids and a Tetrameric Structure*
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ABSTRACT
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
) and IgD(
) sera but not to
IgG, IgM, or IgA myeloma sera. Furthermore, the fragment specifically
bound to peripheral blood B lymphocytes, and the binding was inhibited
by preincubation with anti-IgD-Fab polyclonal antibodies. Results
obtained by introducing five amino acids randomly into
MID962-1200 using transposons suggested that
-helix
structures were important for IgD binding. Ultracentrifugation
experiments and gel electrophoresis revealed that native
MID962-1200 was a tetramer. Interestingly,
tetrameric MID962-1200 attracted IgD more than 20-fold
more efficiently than the monomeric form. Thus, a tetrameric structure
of MID962-1200 is crucial for optimal IgD-binding capacity.
![]()
INTRODUCTION
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
![]()
MATERIALS AND METHODS
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
or BL21(DE3) (Novagen; Darmstadt,
Germany) were used for most transformations. For vectors containing
fragments A and B, the host BL21(DE3)-pLysS (Novagen) was used.
Transformed bacteria were grown in Luria Bertani broth
supplemented with kanamycin. In the case of BL21(DE3)-pLysS,
chloramphenicol was also added. The expression vector pET-26b(+) was
from Novagen, and the pMAL expression vector was purchased from New
England Biolabs (Beverly, MA). The human IgD myeloma whole sera
IgD(
) and IgD(
) were obtained from The Binding Site (Birmingham,
England), and the IgD standard serum OTRD 02/03 was from Behringwerke
(Marburg, Germany). Myeloma whole sera IgG, IgM, and IgA were included
as described previously (6). Horseradish peroxidase (HRP)-conjugated
goat anti-human IgD polyclonal antibodies were purchased from BioSource
International (Camillo, CA), and HRP-conjugated anti-human
- or
-light chain polyclonal antibodies were from Dakopatts (Glostrup,
Denmark). To produce a specific anti-MID902-1200
antiserum, rabbits were immunized intramuscularly with 200 µg of
purified recombinant protein emulsified in complete Freund's adjuvans
(Difco, Becton Dickinson; Heidelberg, Germany) and boosted on days 18 and 36 with the same dose of protein in incomplete Freund's adjuvans.
Blood was drawn 2 to 3 weeks later. HRP-conjugated swine anti-rabbit
pAb (Dakopatts) were used as detection antibodies. Antibodies used for
flow cytometry were R-phycoerythrin (RPE)-labeled anti-human CD19
(Dakopatts) mAb and the Ig-fraction of rabbit anti-human IgD-Fab (4),
which was further purified by passing through a polyclonal Ig-Sepharose column.
. Thereafter,
the plasmids encoding for the MID fragments were transformed into the
expressing hosts BL21(DE3) or BL21(DE3)-pLysS. All constructs were
sequenced using the BigDye Terminator Cycle Sequencing v. 2.0 Ready
reaction sequencing kit (PerkinElmer Life Sciences).
-D-galactoside,
resulting in overexpression of the proteins. Bacteria were sonicated,
and the recombinant proteins were purified on columns containing a
nickel resin (Novagen) according to the manufacturer's instructions
for native conditions. Fragment I, which was cloned into the pMAL-c2
vector, was purified on amylose resin columns (New England Biolabs).
The concentrations of eluted proteins were determined using the BCA
Protein Assay kit (Pierce). The resulting proteins were then examined
by SDS-PAGE, Western, and dot blots.
myeloma protein, The Binding Site) for 1 h.
HRP-conjugated goat anti-human IgD (BIOSOURCE
International), diluted 1:1,000, was added after four washes and
incubated for 45 min. The Ig proteins were diluted in PBS-Tween
containing 2% milk powder, and the incubations were kept at room
temperature. Finally, the membrane was washed with PBS-Tween four
times. Development was performed with ECL Western blotting detection
reagents (Amersham Biosciences) and visualized with a Personal
Molecular Imager FX (Bio-Rad). Analysis of tetrameric and monomeric
forms of MID962-1200 (F2) on Coomassie-stained gels and
Western blots was performed with the Quantity One densitometry software
from Bio-Rad.
- and
-light chain polyclonal antibodies. The membranes were then washed four times and developed as
described above.
)) diluted in 4-fold steps in 0.1 M Tris-HCl (pH
9.0) at 4 °C overnight. The plates were washed four times with
PBS-Tween and blocked for 2 h at room temperature with
PBS-Tween supplied with 1.5% ovalbumin (blocking buffer). After four
washings, the plates were incubated for 1 h at room temperature
with 2 µg of the MID-derived proteins diluted in blocking buffer.
Thereafter, the plates were washed and incubated with rabbit
anti-MID902-1200 antiserum diluted 1:500 in blocking
buffer. After 1 h at room temperature, HRP-conjugated swine
anti-rabbit pAb diluted 1:1,000 was added and incubated at room
temperature for 1 h. After four additional washings, the plates
were developed and measured at 450 nm.
. The resulting clones were pooled, and the
plasmid DNA was extracted. The Entranceposon was removed by
digestion with NotI leaving 15 base pairs. DNA was ligated
and the plasmids transformed into BL21(DE3). The resulting clones
containing five extra amino acids at different positions were tested
for specific IgD-binding capacity using colony-blots. Nitrocellulose
blotting membranes (Sartorius; Göttingen, Germany) were incubated
on the plates with E. coli clones. After 20 min, bacteria on
the membranes were lysed with chloroform treatment for 30 min. The
membranes were washed, blocked, and incubated with IgD as described
above for Western blots. To determine the precise position of the five
extra amino acids, the F2 fragment was amplified by PCR using M13
forward and reverse primers. The resulting PCR products were sequenced using capillary electrophoresis on a Beckman CEQ 2000 and a
dye-terminator cycle sequencing kit (CEQ DTCS kit, BeckmanCoulter,
Stockholm, Sweden). Editing and alignment of the resulting DNA
sequences were performed using PHRED (CodonCode, Deadham) and
SEQUENCHER (MedProbe, Oslo, Norway).
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RESULTS
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES

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Fig. 1.
The IgD-binding region is located within
MID902-1200 (fragment F1). Panel A,
the localization of MID fragments obtained by protease treatment of
native MID isolated from M. catarrhalis strain Bc5 are
compared with full-length MID1-2139. Trypsin degradation
generated the 80-, 40-, and 35-kDa fragments, whereas the 25-kDa
fragment was obtained with chymotrypsin and the 66-kDa fragment with
LysC. Panel B, recombinant MID fragments covering the entire
molecule (designated A-I). Fragments attracting IgD (+) or
not binding IgD (
) are indicated to the right. In panel A,
native MID was treated with proteases overnight, followed by analyses
by SDS-PAGE and Western blot. Specific bands were excised from the
gels, and the proteins were sequenced by Edman degradation or mass
spectrometry. In panel B, 11 fragments were cloned and
expressed in E. coli. The recombinant proteins were purified
using nickel or amylose resins and analyzed for IgD binding in Western
and dot blots. After blotting, the resulting filters were incubated
with human IgD myeloma serum followed by incubation with a secondary
HRP-conjugated polyclonal antibody and subsequent development using
ECL.

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[in a new window]
Fig. 2.
MID962-1200 (fragment F2) has a
conserved IgD-binding capacity compared with full-length
MID1-2139. Equimolar concentrations (ranging from 240 to 0.06 nmol) of purified full-length MID1-2139 and eight
truncated MID fragments (F1-F8) were analyzed for IgD
binding by dot blots. The proteins MID902-1130
(F8), MID985-1130 (F7), and
MID1000-1200 (F4) did not attract IgD, whereas
all other fragments bound IgD. DNA encoding for the various truncated
MID proteins were cloned into the expression vector pET26b(+) and
produced in E. coli. The recombinant proteins containing
histidine tags were purified and dot blotted onto a nitrocellulose
membrane. The membrane was probed with human IgD(
) followed by
secondary HRP-conjugated polyclonal antibodies that were used for
detection.

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[in a new window]
Fig. 3.
The IgD-binding fragment
MID962-1200 (F2) is a tetramer as revealed by
ultracentrifugation and PAGE at native conditions. A,
MID962-1200 was subjected to ultracentrifugation, and the
obtained results were compared with theoretical values for a tetramer
and dimer (broken lines). B,
MID962-1200 ran as a tetramer at non-reducing conditions.
The ultracentrifugation was performed on a Beckman Optima XL-A
analytical ultracentrifuge with absorbance optics as described in
detail under "Material and Methods." In B, recombinant
MID962-1200 was analyzed by gel electrophoresis under
native conditions and a corresponding Western blot using IgD(
) as
probe and secondary HRP-conjugated anti-IgD antibodies. Transferrin and
albumin were included as molecular mass markers running at 80 and 66 kDa, respectively.

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[in a new window]
Fig. 4.
A tetrameric structure of
MID962-1200 (F2) is a prerequisite for optimal IgD
binding. A, SDS-PAGE of MID962-1200 after
treatment at 60 °C separates monomers and tetramers. After heat
treatment at 100 °C monomers only can be detected. B,
Corresponding Western blot with IgD as probe reveals weak IgD binding
to monomers. C, mean IgD binding to tetramers and monomers,
respectively, in six different experiments. IgD binding is shown as
arbitrary units/µg protein. Error bars indicate S.D.
MID962-1200 was treated in SDS sample buffer at 60 or
100 °C for 10 min and subjected to SDS-PAGE and Western blot
analysis. No difference was found in blotting efficiency between the
monomeric and tetrameric forms. The resulting Coomassie-stained gel and
Western blot were analyzed by densitometry. The percentage of protein
migrating as tetramer or monomer was calculated and compared with the
IgD-binding capacity.
-Helix Structures--
The MID962-1200 sequence was
subjected to computer analysis (Fig.
5A). A possible secondary
structure of the truncated MID including four
-helices and several
-strands was observed. Data based upon sequence analysis suggested
that a reduction in the number of amino acids at the N- and C-terminals
of MID962-1200 would thus destroy the secondary structure,
causing a weaker IgD binding that would eventually disappear.
Therefore, five amino acid residues were randomly introduced into
MID962-1200 using transposons and a MuA
transposase in vitro. A fraction of the resulting
E. coli clones (n = 90) were examined for
IgD binding, and their MID962-1200-containing
plasmids were sequenced. Two different groups were consequently found,
i.e. binding and non-binding clones (Fig. 5B).
When the sequence MID982-1059 was interrupted with the
five extra amino acids, IgD binding was completely abolished. Another
sequence (MID1100-1145) that was upstream of the molecule
was also found to be important for IgD binding. Interestingly, those
sequences included
-helix structures. In contrast,
MID962-1200 still attracted IgD when five extra amino acid
residues were introduced near the N-terminal region or between
MID1059 and MID1100, i.e. two
sequences not containing
-helices. Insertion of extra amino acids
within the end of the C-terminal-flanking region did not considerably
influence IgD binding, a finding that was partly consistent with the
truncated MID fragments shorter than MID962-1200. Computer
analysis revealed that when five amino acid residues were introduced
into sequences responsible for
-helix formation, that particular
structure was disrupted. Thus, the secondary structure analysis (Fig.
5A) compared with the data obtained with transposons confirmed the results seen with the truncated MID protein series (Fig.
2).

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[in a new window]
Fig. 5.
Introduction of five amino acid residues in
the flanking regions reduces the IgD-binding capacity of
MID962-1200 (F2). A, prediction of the
secondary structure of MID962-1200. In addition to the
area demonstrating the smallest possible recombinantly expressed
IgD-binding fragment (Abolished binding),
-helix and
-strands are indicated. B, diagram showing
lgD-binding when five extra amino acids were randomly inserted into the
MID962-1200 sequence. Negative (
) and positive (+)
IgD-binding is indicated. Transposons were introduced into
MID962-1200 in vitro using a MuA
transposase followed by a series of subclonings and screening of
resulting clones by colony blots. Finally, the MID962-1200
DNA was sequenced.

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[in a new window]
Fig. 6.
MID962-1200 (F2) specifically
binds to human IgD but not to IgG, IgM, or IgA. The truncated
MID962-1200 protein was recombinantly expressed in
E. coli and purified. Thereafter, MID962-1200
was applied in 4-fold dilutions to a nitrocellulose membrane. Resulting
filters were incubated with different myeloma sera representing the
different Ig classes followed by incubation with HRP-conjugated
anti-human
- and
-light chain polyclonal antibodies. IgD
B.W. is a polyclonal standard serum from Behringwerke.

View larger version (22K):
[in a new window]
Fig. 7.
FITC-conjugated MID962-1200 (F2)
interacts with the IgD receptor on human B cells. A,
flow cytometry profile of human PBLs incubated with RPE-conjugated
anti-CD19 mAbs (CD19-RPE). B, CD19+
lymphocytes specifically attracted FITC-conjugated
MID962-1200. C, decreased
MID962-1200-FITC binding was detected when the IgD B cell
receptors were blocked with polyclonal antibodies
(anti-IgD-Fab-pAb). PBLs were purified from heparinized
human blood using Ficoll gradients. Incubation with Abs and
MID962-1200-FITC was followed by washings and analysis by
flow cytometry. A typical experiment out of three performed is
shown.
![]()
DISCUSSION
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
-light chains of IgG, IgM, and IgA (23). The Ig binding is
mediated through several highly homologous domains (24), each
consisting of 72-76 amino acid residues. Another Ig-binding protein,
protein Sir derived from group A streptococci, binds to
human IgA and IgG of all subclasses (25). The IgA-binding domain of
protein Sir recently has been characterized in detail and shown to
consist of 29 amino acids (26). However, protein Sir was found to
contain the same 29 residues as another streptococcal protein (Arp4), which did not interact with IgA in itself. When 10 extra amino acid
residues were added at each end of the 29-amino acid residue sequence
and in addition a C-terminal cysteine residue, a coiled-coil dimer
could be formed, and the resulting 50-amino acid long peptide strongly
interacted with IgA.
![]()
ACKNOWLEDGEMENTS
![]()
FOOTNOTES
To whom correspondence should be addressed: Dept. of Medical
Microbiology, University Hospital Malmö, Lund University,
S-205 02 Malmö, Sweden. Tel.: 46-40-331340; Fax:
46-40-336234; E-mail: kristian.riesbeck@mikrobiol.mas.lu.se.
![]()
ABBREVIATIONS
![]()
REFERENCES
TOP
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
REFERENCES
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