Originally published In Press as doi:10.1074/jbc.M207162200 on August 30, 2002
J. Biol. Chem., Vol. 277, Issue 44, 41770-41777, November 1, 2002
Identification of a Novel Maturation Mechanism and Restricted
Substrate Specificity for the SspB Cysteine Protease of
Staphylococcus aureus*
Isabella
Massimi
,
Ellen
Park
,
Kelly
Rice
§,
Werner
Müller-Esterl¶,
Daniel
Sauder
**
, and
Martin J.
McGavin
§§¶¶
From the
Department of Laboratory Medicine and
Pathobiology and the
Department of Medicine, University of
Toronto, Toronto, Ontario M5G 1L5, Canada, the Departments of
** Dermatology and §§ Microbiology,
Sunnybrook and Womens College Health Science Center, Toronto, Ontario
M4N 3M5, Canada, and the ¶ Institute for Biochemistry II,
University of Frankfurt Medical School, Frankfurt D-60590, Germany
Received for publication, July 17, 2002
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ABSTRACT |
The SspB cysteine protease of
Staphylococcus aureus is expressed in an operon, flanked by
the sspA serine protease, and sspC, encoding a
12.9-kDa protein of unknown function. SspB was expressed as a 40-kDa
prepropeptide pSspB, which did not undergo autocatalytic maturation.
Activity of pSspB was reduced compared with 22-kDa mature SspB, but it
was equivalent to mature SspB after incubation with SspA, which
specifically removed the pSspB N-terminal propeptide. SspC abrogated
the activity of pSspB when incubated in a 1:1 complex but had no effect
on SspA or papain. Activity of the pSspB·SspC complex was restored
when incubated with SspA, and SspC was cleaved by SspA but not pSspB.
Thus, SspC maintains pSspB as an inert zymogen, and SspA is required
for removal of the propeptide and inactivation of SspC. Like the papain
protease family, SspB cleaved substrates with a hydrophobic amino acid
at P2 but had a strong preference for arginine at P1. It did not cleave
casein, serum albumin, IgG, or IgA, but it promoted detachment of
cultured keratinocytes and cleaved fibronectin and fibrinogen at sites
recognized by urokinase plasminogen activator and plasmin,
respectively. It also processed high molecular weight kininogen in a
manner resembling plasma kallikrein. Thus, SspB exhibits a novel
maturation mechanism and mimics the specificity of plasma serine proteases.
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INTRODUCTION |
Staphylococcus aureus is a leading cause of nosocomial
bacteremia and the overall leading cause of nosocomial infections of all kinds (1). Its ability to colonize and infect virtually every
tissue and organ system of the body distinguishes it from many other
microbial pathogens (2) and is testament of an adaptive capacity that
allows it to thrive or persist in the diverse conditions encountered at
different infection sites. Although S. aureus is an
opportunistic pathogen, it is unusually well endowed with a broad
spectrum of secreted proteins, and individual strains can differ
significantly in their exoprotein profiles (3). This is especially
apparent with toxin expression, and genomics applications have
established that many toxin-related functions are associated with
variable regions of the chromosome (4). Although expression of specific
toxins is frequently associated with distinct genetic backgrounds and
disease syndromes (5), the majority of S. aureus infections
are not of an obviously toxigenic nature. In these situations, a core
complement of secreted proteins common to all strains may represent the
minimal pathogenic unit that defines the majority of suppurative tissue
infections. However, the contributions of these proteins to the growth
and survival of S. aureus remain poorly understood in
relation to the well characterized toxins.
In this context, interest in the functions of secreted proteases has
recently been stimulated through the discovery by signature-tagged mutagenesis that the Staphylococcus serine protease
(SspA1; V8 protease)
contributes to growth and survival in each of three infection models
(6). This followed a report from our laboratory that the cell surface
fibronectin-binding protein adhesin of S. aureus was
sensitive to degradation by SspA, and its stability was enhanced by
supplementing cultures with
2-macroglobulin, a protease
inhibitor present in plasma (7). Inactivation of SspA promotes enhanced
stability of the cell surface fibronectin-binding protein and protein A
adhesins (8), and the metalloprotease aureolysin has also been shown to
inactivate cell surface clumping factor ClfB by cleaving at a single
site (9). These studies have implicated a role for metalloprotease and
serine protease activity in controlling S. aureus adhesion functions.
The metalloprotease is also essential for activation of a precursor
form of the serine protease (10), such that inactivation of aureolysin
results in a culture supernatant that is devoid of proteolytic activity
(9). Furthermore, we have discovered that SspA is expressed as the
first gene of an operon, which encodes also a cysteine protease SspB,
and a third protein of unknown function, SspC (11). Nonpolar
inactivation of sspA resulted in the SspB cysteine protease
being expressed and secreted in a 40-kDa prepropeptide form pSspB,
suggesting that maturation of SspB is dependent on the sequential
activity of the metalloprotease and serine protease in a three-step
cascade pathway. Herein, we present an analysis of the function of SspB
and the roles of SspA and SspC in promoting maturation of the SspB
cysteine protease. Our data establish that the Ssp operon promotes a
unique mechanism of maturation for the SspB cysteine protease, which
exhibits a limited substrate specificity for cleavage of specific
plasma proteins.
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MATERIALS AND METHODS |
Strains and Culture Conditions--
S. aureus RN6390
and RN4220 were obtained from Dr. Richard Novick (Skirball Institute,
New York). S. aureus SP6391, an isogenic derivative of
RN6390 possessing an sspA::erm allelic
replacement mutation has been described by us previously (11). Cultures were maintained in brain heart infusion broth (Difco)
supplemented with 15 g/liter agar when required. All cultures were
grown at 37 °C, and culture media were supplemented with 10 µg/ml
erythromycin or chloramphenicol, when required for plasmid propagation
or maintenance of mutant phenotypes. For expression and purification of
proteases, cultures were grown in medium optimized for protease
expression (12). For expression and purification of SspA or SspB,
2-liter flasks containing 250 ml of protease expression medium were
inoculated to achieve an initial absorbance of 0.1 at 600 nm.
Cultures were then grown for 18 h with orbital shaking at 250 rpm,
and the cells were removed by centrifugation.
PCR and Recombinant DNA Procedures--
S. aureus
genomic and plasmid DNA were isolated using Qiagen 100/G genomic tips
and plasmid midi kits (Qiagen Inc., Valencia, CA), following the
manufacturer's protocol for Gram-positive bacteria. Restriction
enzymes, T4 DNA ligase, and calf intestinal alkaline phosphatase were
purchased from New England BioLabs and used in accordance with
manufacturer's recommendations. Agarose gel electrophoresis, restriction endonuclease digestion, vector dephosphorylation, ligation
reactions, phenol chloroform extraction, and ethanol precipitation of
ligation mixtures were all conducted according to standard protocols.
PCR was conducted with AmpliTaq DNA polymerase (Roche Canada) and
reagents, employing standard conditions. The PCR amplicons were treated
with proteinase K before digestion with restriction endonuclease. DNA
ligation reactions were electroporated into S. aureus RN4220
following standard protocols (13).
Construction of SspA Complementation Vector--
Plasmid
pRN5548, kindly provided by Dr. Richard Novick (14), was digested with
HindIII to remove a blaZ promoter fragment, creating pRN5548a. A DNA segment encompassing the sspA
promoter and complete open reading frame was amplified from genomic DNA of S. aureus RN6390 with oligonucleotide primers sspA-F4 and
sspA-R1, corresponding to nucleotides 120-140 and 1573-1552,
respectively, of the ssp operon (11). A PstI site
was incorporated into the sspA-F4 primer, allowing the 1.45-kb amplicon
to be digested with PstI and XbaI, the latter
enzyme cleaving at nucleotide 1383 of the ssp operon, 19 nucleotides from the translation stop codon of sspA. The
1.3-kb product was ligated into complementary sites of pRN5548a and
electroporated into S. aureus RN4220, followed by selection
for chloramphenicol-resistant colonies. The resulting plasmid,
p5548-SspA, was then electroporated into S. aureus SP6391, which possess the nonpolar sspA::erm
allelic replacement mutation (11).
Expression and Purification of SspA, SspB, pSspB, and
SspC--
The 40-kDa pSspB was purified from culture supernatant of
S. aureus SP6391, whereas SspA and mature SspB were purified
from culture supernatant of S. aureus RN6390. Proteins were
precipitated from culture supernatant by treatment with 80% saturation
of ammonium sulfate, collected by centrifugation, dialyzed
versus 20 mM Tris-HCl, pH 7.4, and passed
through a 0.45-µm syringe filter. Protein was applied to a Hi Prep
16/10 Q-Sepharose Fast Flow column at a flow rate of 2.5 ml/min using
the Akta Prime chromatography system (Amersham Biosciences). The column
was then washed with 50 ml of equilibration buffer followed by the
application of a linear gradient from 0.0 to 0.5 M NaCl
applied over a volume of 150 ml, collecting 2-ml fractions. Column
fractions containing SspA or SspB as determined by SDS-PAGE and gelatin
zymography were pooled and mixed with an equal volume of 4.0 M ammonium sulfate in 50 mM sodium phosphate
buffer, pH 7.0, then applied to a 5-ml Hi-Trap phenyl-Sepharose column
equilibrated in 2.0 M ammonium sulfate and 50 mM sodium phosphate buffer, pH 7.0. Nonbound proteins were removed by washing with equilibration buffer followed by elution with a
linear descending gradient of 2.0-0.0 M ammonium sulfate applied over a volume of 25 ml. Fractions containing purified SspA or
SspB were pooled and desalted on a Hi Prep 26/10 desalting column
equilibrated in 20 mM Tris-HCl, pH 7.4.
For expression of recombinant SspC in Escherichia coli,
forward primer sspB2601-2620 was paired with reverse primer
sspC2991-2968, to PCR amplify a fragment spanning the last 8 codons of
SspB and ending with the C-terminal amino acid codon of
sspC. The 390-bp amplicon was ligated to the pBAD-Topo TA
vector (Invitrogen) creating pBAD-SspC, in which the arabinose-induced
pBAD promoter is used in conjunction with the internal sspC
translation initiation signals to promote expression of SspC with a
C-terminal His6 tag in E. coli TOP10 cells. For
expression of recombinant protein, a culture of E. coli
TOP10 pBAD-SspC was grown in LB broth and induced with arabinose for
induction of fusion protein expression followed by preparation of cell
lysate, following recommendations provided with the pBAD-Topo TA
cloning and expression system. The His6 SspC fusion protein
was then affinity purified from the cell lysate using an Akta Prime
chromatography system and the Hi-Trap chelating Sepharose high
performance column and buffers provided with the Hi-Trap purification
kit (Amersham Pharmacia), following the manufacturer's guidelines.
His6-SspC was desalted employing the Hi Prep 26/10 desalting column equilibrated in 20 mM Tris-HCl, pH 7.4, and purified further by anion exchange chromatography.
Enzyme Assays, Substrates, and Antibodies--
Purified human
plasma fibronectin was a generous gift from Dr. Kenneth Ingham.
Resorufin-labeled casein was purchased from Roche Diagnostics (Laval,
Quebec). High molecular weight single-chain and two-chain kininogen,
and plasminogen-depleted fibrinogen were purchased from Enzyme Research
Laboratories (South Bend, IN). Human serum albumin, IgA, and IgG were
purchased from Sigma. Monoclonal antibodies toward different domains of
kininogen have been described previously (15). Antibody MBK3 is
specific for the nonapeptide bradykinin (D4 domain), HKH4 is specific
for amino acids 1-123 in the D1 domain of the heavy chain, and HKL1 is
directed toward amino acids 543-554 in the D6 domain of the light
chain. Synthetic chromogenic protease substrates
Bz-Pro-Phe-Arg-pNA, Bz-Val-Gly-Arg-pNA, Bz-L-Arg-pNA, and
pyroglutamyl-Phe-Leu-pNA were purchased from Sigma.
Tosyl-Gly-Pro-Arg-pNA was obtained from Roche.
Z-Phe-Arg-pNA and Suc-Ala-Ala-Pro-Glu-pNA were
obtained from Bachem (Torrance, CA).
All assays for proteolytic activity were conducted at 37 °C, and
unless otherwise indicated, they contained 10 mM cysteine and 5 mM EDTA for assay of SspB. Assays with
resorufin-labeled casein were conducted as described previously (11),
with buffer consisting of 50 mM Tris, pH 7.8, and 5 mM CaCl2 for SspA; for SspB, the buffer was 50 mM HEPES, pH 6.4. For synthetic pNA substrates, assays were conducted in triplicate wells of microtiter plates containing 1 mM substrate in 100 µl of 50 mM
HEPES, pH 6.4. Plates were read at defined time points using a Bio-Rad
model 3550 microplate reader equipped with a 405-nm filter. For
specific activity determinations, a standard plot of absorbance at 405 nm versus the concentration of pNA was
constructed and employed to quantify the amount of substrate hydrolyzed
at defined time points. For pH optimum determinations, assays were
conducted with McIlvaine's citrate-phosphate buffer, with the
proportions of citric acid and disodium phosphate adjusted to obtain pH
values ranging from 4.0 to 8.0. To assay for the effect of cysteine and
EDTA, assays were conducted in 50 mM HEPES buffer, pH 6.4, containing specific supplements as indicated. Where indicated, the
cysteine protease inhibitor E-64 was included in assays at a
concentration of 28 µM, and the serine protease inhibitor
3,4-dichloroisocoumarin was included at 1 mM for inhibition of SspA where required or 28 µM for effect on SspB.
For proteolysis of protein substrates, samples were incubated with SspB
at the indicated molar ratios, and proteolysis was stopped at defined
time points by the addition of 28 µM E-64. The samples
were then precipitated by mixing with an equal volume of ice-cold 20%
trichloroacetic acid; after centrifugation, precipitated proteins were
solubilized by boiling for 5 min in either reducing or nonreducing
SDS-PAGE sample buffer. The integrity of the protein substrate was then
visualized by SDS-PAGE and staining with Coomassie Blue. The
specificity of kininogen proteolysis was assessed further by Western
blotting, in which case replicate gels were transferred to Immobilon-P
(Millipore; Bedford, MA) membrane and probed with specific antibodies.
Blots were developed using goat anti-mouse IgG alkaline
phosphatase-conjugated secondary antibody (Jackson ImmunoResearch; West
Grove, PA), with nitro blue tetrazolium and 5-bromo-4-chloro-3-indolyl
phosphate substrate (Bio-Rad). Fibrinolytic activity was assayed by the
fibrin plate method (16).
Keratinocyte Cell Culture--
Normal human keratinocytes were
obtained from neonatal foreskin and maintained in serum-free
keratinocyte growth medium (K-SFM) supplemented with bovine pituitary
extract and recombinant epidermal growth factor, as described
previously (17). For determination of the effect of SspB, keratinocytes
at 80-90% confluence were treated with 0.05% trypsin for 2-3 min at
37 °C followed by 1:5 dilution of trypsin with fresh K-SFM and
collection of cells by centrifugation. Cells were resuspended in fresh
K-SFM followed by quantification of viable cells in a hemocytometer and
plating at a density of 2.5 × 104 in individual wells
of 24-well cell culture plates. After growth to 80-90% confluence,
cells were washed twice with sterile phosphate-buffered saline,
followed by the addition of fresh K-SFM containing 10 mM
cysteine, and 10 µg/ml mSspB or pre-SspB. As a control, mSspB was
preincubated with 28 µM E-64 at 37 °C for 30 min
before the addition to cell culture plates. Cells were then visualized
microscopically at hourly intervals until changes in cell morphology
were observed.
SDS-PAGE, Gelatin Zymography, Western Blotting, and N-terminal
Sequence Analyses--
SDS-PAGE was conducted using the
electrophoresis and sample buffer system as described by Laemmli (18)
and the Bio-Rad Mini-Protean 3 apparatus. After electrophoresis,
proteins were visualized by staining with Coomassie Brilliant Blue
R-250. For Western blotting, proteins were transferred to Immobilon-P
membrane in standard transfer buffer (19); samples for N-terminal
sequence analyses were transferred to membrane using CAPS transfer
buffer following established protocols (20). Protein bands on membranes
for N-terminal sequence analysis were visualized by brief staining with
0.1% Coomassie Blue in 40% methanol, after which the protein bands were excised with a scalpel and submitted to the University of Toronto
HSC Biotechnology Center for N-terminal sequencing. For gelatin
zymography, electrophoresis was conducted in SDS-polyacrylamide gels
that were copolymerized with 1 mg/ml gelatin as described previously
(11).
 |
RESULTS |
Maturation of the SspB Prepropeptide Requires SspA--
As
reported previously (11), when compared with the profile of secreted
proteins from S. aureus RN6390 (Fig.
1A, lane 1), culture supernatant of S. aureus SP6391 harboring the
defective sspA::erm allele exhibits
loss of the SspA serine protease and a 22-kDa peptide believed to
represent mature SspB, accompanied by the appearance of the 40-kDa
pSspB (Fig. 1A, lane 2). Complementation of the
sspA defect with p5548-SspA restored the normal profile of
secreted proteins (Fig. 1A, lane 4), whereas
pRN5548a alone had no effect (Fig. 1A, lane 3),
and these changes were duplicated in a zymogram for detection of
proteolytic activity (Fig. 1B). The 22-kDa polypeptide
purified from S. aureus RN6390 (Fig.
2A, lane 2)
possessed an N-terminal sequence spanning amino acids 184-194 of pSspB
(Fig. 2B), indicating that processing occurred at
Glu183, consistent with it having been processed by
SspA, which is a member of the glutamyl endopeptidase family (21).

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Fig. 1.
SDS-PAGE (A) and gelatin
zymogram (B) of culture supernatants from
S. aureus RN6390 (lane 1),
SP6391 (sspA::erm;
lane 2), SP6391-harboring pRN5548 vector
(lane 3), and SP6391 with p5548-SspA complementation
vector (lane 4). The amount of culture
supernatant applied was equivalent to 1.0 A600
unit of culture in A or 0.02 A600
unit in B. Arrows on the right of each
panel indicate the positions of pSspB, SspA, and mature
SspB.
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Fig. 2.
Proteolytic maturation of pSspB by the SspA
serine protease. A, SDS-PAGE of culture supernatant from
S. aureus RN6390 (1.0 A600 unit;
lane 1), purified mature SspB (5.0 µg; lane 2),
culture supernatant of S. aureus SP6391 (1.0 A600 units; lane 3), and purified
pSspB (5 µg; lane 4). B, schematic diagram of
pSspB and sites that are cleaved by SspA in proteolytic maturation. The
shaded portion (amino acids 1-183) represents the
N-terminal propeptide, and the hatched segment (amino acids
184-357) designates mature SspB. Amino acids 175-193, spanning the
junction of the propeptide and mature SspB, are shown above the
diagram. The light underline beneath this sequence and
corresponding vertical arrow represent the N-terminal
sequence of purified mature SspB shown in A, lane
2, and the presumed site of processing by the SspA glutamyl
endopeptidase. The heavy underlined sequence designates the
N-terminal sequence of the 22-kDa product obtained by treatment of
pSspB with SspA (2C, lanes 2 and 3),
and the corresponding vertical arrow shows the
experimentally determined site of processing by SspA in
vitro. The amino acid sequence below the diagram corresponds to
the N terminus of the propeptide, with the light underline
representing the determined N-terminal sequence of purified pSspB shown
in A, lane 4. The heavy underlined
sequence represents the determined N-terminal sequence of the 18-kDa
product obtained by treatment of pSspB with SspA (C,
lanes 2 and 3). The corresponding vertical
arrow shows the site that is cleaved by SspA. C,
SDS-PAGE demonstrating proteolytic maturation of pSspB by the SspA
serine protease. Purified pSspB (30 µg) was incubated in buffer alone
for 2 h (lanes 1 and 4) or supplemented with
0.3 µg of SspA (lanes 2 and 3), 0.3 µg of
mature SspB (lane 5), or 0.3 µg of mature SspB and 28 µM E-64 cysteine protease inhibitor (lane 6).
The absence ( ) or presence (+) of cysteine and EDTA necessary for
cysteine protease activity is indicated above each lane. In
lane 3, incubation was continued for 2 h after the
addition of cysteine and EDTA to test for degradation of the propeptide
by mature SspB.
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Confirmation of processing by SspA was obtained with pSspB purified
from culture supernatant of S. aureus SP6391 (Fig.
2A, lane 4), which possessed an N-terminal
sequence DSHSKQLEIN, corresponding to pSspB after processing by signal
peptidase (Fig. 2B). When pSspB was incubated with SspA in a
100:1 w/w ratio for 2 h, it was converted to polypeptides of 18 and 22 kDa (Fig. 2C, lane 2). Complete conversion
occurred within 15 min, and in a 60-min incubation, unprocessed pSspB
was not apparent until the ratio exceeded 500:1 (data not shown). The N
terminus of the 22-kDa cleavage product indicated that processing
occurred at Glu177 (Fig. 2B), compared with
Glu183 for mature SspB from culture supernatant. Because
the N terminus of the mature protease is preceded by a sequence that is
enriched in glutamic acid (Fig. 2B), this may allow for some
variability in the site of processing, in response to differences in pH
and ionic strength. The N terminus of the lower mass cleavage product corresponds to the N-terminal propeptide after cleavage at
Glu8 (Fig. 2B), and the mass of this fragment
correlates with a predicted 19.1-kDa mass after cleavage by SspA at
Glu8 and Glu177. Therefore, although the
propeptide contains 16 glutamate residues (at positions 8, 47, 50, 60, 61, 94, 126, 132, 133, 151, 153, 165, 176, 177, 179, 183), processing
by SspA is limited to specific sites.
When the activity of the matured cysteine protease was activated by
addition of cysteine and EDTA, the liberated propeptide remained stable
during an additional 2-h incubation (Fig. 2C, lane
3). When pSspB alone was incubated in buffer containing cysteine and EDTA, no autocatalytic processing occurred (Fig. 2C,
lane 4); and when incubated with mature SspB at a 100:1
ratio, pSspB also remained largely unprocessed (Fig. 2C,
lane 5). Therefore, there is an absolute requirement for
SspA in maturation of pSspB. This differentiates pSspB from other
microbial proteases, including subtilisin of Bacillus
subtilus and the SpeB cysteine protease of Streptococcus
pyogenes, which undergo autocatalytic maturation (22, 23).
SspC Is an Inhibitor of the SspB Prepropeptide and Is Inactivated
by SspA--
In the established paradigm for protease maturation
exemplified by subtilisin of B. subtilus, the prepropeptide
is an inert zymogen, and the N-terminal propeptide plays a key role in
maturation. Initially, it functions as an intramolecular chaperone to
facilitate folding of the precursor. Then, upon autocatalytic
processing, it forms a complex with the mature protease, inhibiting its
activity until degraded by the mature protease in the final step of
maturation (23-25). Based on this example, we anticipated that pSspB
would represent an inert zymogen. Unexpectedly, when assayed with
Bz-Pro-Phe-Arg-pNA substrate (Fig.
3A), it exhibited a constant
rate of hydrolysis over a period of 3 h, but this was consistently
3-4-fold less than that of an equimolar amount of mature SspB.
However, when the same amount of pSspB was assayed after treatment with
SspA to remove the N-terminal propeptide, its hydrolysis kinetics were indistinguishable from mature SspB. Therefore, although pSspB did not
represent an inert zymogen, its catalytic activity was enhanced after
maturation with SspA.

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Fig. 3.
A, hydrolysis of 1.0 mM
Bz-Pro-Phe-Arg-pNA over a 3-h period by 50 pmol of mature
SspB ( ) or 50 pmol of pSspB alone ( ), pSspB after conversion with
SspA at a 100:1 w/w ratio ( ), a 1:1 pSspB:pSspC molar ratio ( ),
and a 1:1 pSspB:SspC molar ratio after the addition of an equimolar
amount of SspA ( ). B, susbtrate hydrolysis by pSspB
(bar 1), SspB (bar 2), SspA (bar 3),
or papain (bar 4) in the absence (filled bars) or
presence (open bars) of an equimolar amount of
His6-SspC. The substrate was 1 mM
Bz-Pro-Phe-Arg-pNA, with exception of SspA, which was
assayed with 1 mM Suc-Ala-Ala-Pro-Glu-pNA.
Substrate hydrolysis (A405) was quantified after
a 60-min incubation.
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Because the N-terminal propeptide is not degraded by SspA or SspB (Fig.
2C), these data indicate that the propeptide does not
function as an inhibitor of enzyme activity. Therefore, we focused our
attention on SspC, the third component of the Ssp operon, which is a
predicted 12.9-kDa acidic protein with no obvious signal peptide or
transmembrane domains (11). When pSspB was preincubated with an
equimolar amount of purified His6-SspC, its activity was
abrogated over a 3-h incubation (Fig. 3A). However, when
SspA was added to achieve a 1:1:1 ratio of each protein, activity was
restored, and the rate of hydrolysis approached that of purified mature
SspB. These data suggest that SspC is a specific inhibitor of SspB and
is inactivated by SspA. Accordingly, SspC also inhibited mature SspB
but exhibited negligible inhibition of SspA or the nonrelated cysteine
protease, papain (Fig. 3B). Furthermore, when SspC was
incubated with SspA at a 10:1 molar ratio, it was cleaved rapidly to a
lower molecular weight product (Fig.
4A), whereas pSspB did not
cleave SspC at the same 10:1 ratio (Fig. 4B). Cumulatively,
these data establish that SspC functions to maintain pSspB as an inert
zymogen, with maturation of pSspB being dependent on SspA to cleave the
N-terminal propeptide and to inactivate SspC.

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Fig. 4.
SDS-PAGE of 10 µg of purified
His6-SspC (lanes 1) after incubation with SspA
(A) or pSspB (B). Assays were initiated by
mixing SspC with SspA or pSspB to achieve a 10:1 molar ratio in 50 mM HEPES buffer, pH 6.4 (A), or in buffer
supplemented with 10 mM cysteine and 5 mM EDTA
for incubation with pSspB (B). At time points of 0 (lanes 2) and 30 min (lanes 3), samples were
withdrawn and supplemented immediately with 1 mM
3,4-dichloroisocoumarin serine protease inhibitor (A) or 28 µM E-64 (B). Samples were subjected to
SDS-PAGE utilizing a 12% acrylamide resolving gel.
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Biochemical Characterization of SspB--
When assayed for
activity toward Bz-Pro-Phe-Arg-pNA in McIlvaine's
citrate-phosphate buffer at pH values ranging from 4.0 to 8.0, activity
peaked between pH 6.0 and 6.4 (97 and 100% activity) and declined at
pH 5.4 (69%) and 7.4 (71%). Additional assays for effect of buffer
composition and substrate specificity were conducted in 50 mM HEPES, pH 6.4, as the basal buffer (Table
I). SspB was inactive in the absence of
cysteine and stimulated by EDTA, but not unless cysteine was also
present. SspB was inactivated by the cysteine protease inhibitor E-64
but exhibited 85% activity in presence of 3,4-dichloroisocoumarin,
which is a serine protease inhibitor. Together with our previous report
that SspB possesses a eukaryotic thiol protease histidine active site
consensus pattern (11), these data are consistent with SspB being a
cysteine protease, and as with papain, it is also stimulated by EDTA.
Additional assays of substrate specificity were conducted in buffer
containing 10 mM cysteine and 5 mM EDTA (Table
I).
The papain cysteine protease family exhibits preferential cleavage of
substrates with a hydrophobic amino acid at the P2 position, with P1
being a less critical determinant of specificity (26, 27). Hydrolysis
of Bz-Pro-Phe-Arg-pNA is consistent with a requirement for a
hydrophobic amino acid at P2, and SspB also cleaved
Z-Phe-Arg-pNA, but with reduced efficiency compared with
Pro-Phe-Arg-pNA. Compared with its specific activity toward
Bz-Pro-Phe-Arg-pNA, SspB was 30-fold less active when
assayed with pyroglutamyl-Phe-Leu-pNA, which is a general
substrate for the papain-like cysteine protease family. This
observation suggests a preference for arginine at P1. The occurrence of
arginine at P1 as the exclusive determinant of specificity was excluded
because SspB did not cleave substrates in which arginine was not
preceded by a hydrophobic amino acid, including Bz-Val-Gly-Arg,
tosyl-Gly-Pro-Arg, or Bz-L-Arg. Therefore, SspB exhibits a
strong preference for substrates where arginine is preceded by a
hydrophobic amino acid. This hypothesis was tested further by assay of
SspB for activity toward different protein substrates.
Specificity of SspB for Protein Substrates--
Purified SspB
displayed no activity toward resorufin-labeled casein, a sensitive
substrate for detection of proteolytic activity, whereas SspA exhibited
a concentration-dependent response (Fig. 5). When assayed for the ability to
cleave a variety of human plasma proteins, SspB also exhibited no
activity toward IgG, IgA, or serum albumin even after 24 h of
incubation (data not shown). Therefore, SspB is not a general
proteinase that functions in protein degradation. However, fibronectin,
fibrinogen, and kininogen were all cleaved by SspB, and these
interactions were studied in greater detail.
Specificity of Fibronectin Proteolysis--
When plasma
fibronectin was incubated with SspB at a 20:1 molar ratio (Fig.
6), intact fibronectin was not detected
after 6 h. Fragments consisted of a doublet at 200 and 192 kDa, a
prominent 165-kDa polypeptide, and two lower mass fragments of 37.5 and 27.5 kDa. The N terminus of the 165-kDa fragment indicated that cleavage occurred at
Val258-Arg259-
-Ala260. Cleavage
of fibronectin by urokinase plasminogen activator occurs at this same
site to liberate a 25-kDa peptide corresponding to the N-terminal
fibronectin fragment (28). The N terminus of the 27.5-kDa fragment
liberated by SspB was blocked to N-terminal sequencing, which is
characteristic of the N terminus of fibronectin. This same fragment
could also be affinity purified using a Sepharose matrix containing a
conjugated synthetic peptide representing the D3 motif of the S. aureus fibronectin-binding protein adhesin (data not shown), which
binds the N-terminal fragment of fibronectin with high specificity
(29). Under nonreducing conditions, the 200- and 192-kDa fragments
showed a sharp decrease in mobility, indicative of their retaining the
C-terminal disulfides that promote fibronectin dimerization. Therefore,
these fragments appear to result from selective removal of the
N-terminal domain from dimeric fibronectin. The size of the 165-kDa
polypeptide lacking the N-terminal domain is consistent with it also
being cleaved by SspB to remove the C-terminal heparin and fibrin
binding domains of fibronectin. Therefore, SspB appears to remove the
N- and C-terminal domains of fibronectin selectively, with a preference
for cleavage at the N terminus.

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Fig. 6.
Proteolysis of human plasma fibronectin by
SspB. Lanes 1 and 3 contain 5 µg of undigested
fibronectin; lanes 2 and 4 contain 30 µg of
fibronectin digested with SspB in a 20:1 molar ratio at 37 °C for
6 h. After boiling in reducing (lanes 1 and
2) or nonreducing (lanes 3 and 4)
sample buffer, proteins were resolved by SDS-PAGE employing a 5-15%
acrylamide gradient gel.
|
|
Specificity of Fibrinogen Cleavage by SspB--
Fibrin clotting is
initiated when thrombin cleaves the
-chain of fibrinogen after
arginine in the sequence Gly-Val-Arg16, releasing
fibrinopeptide A (FbpA1-16) and exposing a new N-terminal Gly-Pro-Arg
sequence, which forms a knob-like structure that fits into a
complementary pocket elsewhere in fibrinogen to initiate polymerization
(30). Because human plasma fibronectin was cleaved at
Val258-Arg259
Ala260, the Val-Arg
sequence in the fibrinogen
-chain is also a potential cleavage site
for SspB. However, when human fibrinogen was incubated with SspB at a
20:1 molar ratio, the 66-kDa
-chain was no longer detected after 30 min (Fig. 7). This was accompanied by the
appearance of a 30-kDa fragment possessing an N-terminal sequence
identical to the intact
-chain. Therefore, SspB did not exert a
procoagulant activity by releasing the fibrinopeptide A fragment. The
54-kDa
-chain and 48-kDa
-chain were unaffected by SspB after 30 min, but upon an extended 3-h incubation, the 54-kDa
-chain
gradually disappeared, and the intensity of the
-chain band
thickened. N-terminal sequence analysis of the 48 kDa band after 3 h of proteolysis provided two amino acid residues at each cycle, from
which two sequences could be discerned: Tyr-Val-Ala-Thr-Arg-Asp-Asn,
corresponding to the N terminus of the intact
-chain, and
Ala-Arg-Pro-Ala-?-Ala-Ala-Ala-Thr-Gln, representing amino acids 43-52
of the
-chain. Therefore, the
-chain remained intact, whereas the
-chain was cleaved at Tyr-Arg42-
-Ala43,
which is identical to the site cleaved by plasmin in the initiation of
fibrinolysis (30). An assay for fibrin degradation employing the fibrin
plate method established that SspB exhibited a limited capacity to
promote fibrin lysis compared with an equimolar amount of plasmin (data
not shown).

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Fig. 7.
SDS-PAGE of 10 µg of
intact human fibrinogen (lane 1) or 10 µg of fibrinogen after incubation with a 20:1 molar
ratio of SspB at 37 °C for 30 min (lane 2), 1 h (lane 3), 2 h (lane 4), or
3 h (lane 5). Proteins were resolved by
SDS-PAGE employing a 5-15% acrylamide gradient gel.
|
|
Specificity of Kininogen Cleavage by SspB--
High molecular
weight plasma kininogen is a single-chain protein, with the N- and
C-terminal ends joined by a disulfide bond. At sites of vascular
damage, it is cleaved by the serine protease plasma kallikrein at
Leu-Met-Lys363-
-Arg364 and
Pro-Phe-Arg-
-Ser372 to release the proinflammatory
vasoactive nonapeptide bradykinin (31), converting single-chain
kininogen to a 62-kDa N-terminal heavy chain and a 52-kDa light chain.
Thus, the Bz-Pro-Phe-Arg-pNA substrate preferred by SspB is
also a substrate for plasma kallikrein, suggesting that SspB may mimic
this activity. Accordingly, when single-chain kininogen (116 kDa) was
incubated with SspB at a 20:1 ratio (Fig.
8), intact kininogen was no longer
evident after 2 h, and fragments of 65, 51, and 43 kDa were
detected, together with a cluster of smaller fragments centered at 23 kDa. The higher mass fragments comigrated with the respective 63- and
52-kDa heavy and light chains of two-chain kininogen, which has been
processed correctly by plasma kallikrein (Fig. 8, lane 4).
The higher mass fragments in the SspB digest of kininogen were less
evident at 6 h, with a greater proportion of lower mass fragments,
indicative of additional proteolysis. Attempts on two occasions to
obtain N-terminal sequence from the 65, 51, and 43 kDa bands were not successful, which was expected for the putative 65-kDa heavy chain fragment because the N terminus of single-chain kininogen contains a
modified pyrrolidone carboxylic acid. Failure to obtain a sequence from
the latter fragments could be the result of their sensitivity to
proteolysis and the possibility of producing overlapping fragments of
similar size.

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Fig. 8.
SDS-PAGE of 10 µg of single-chain high
molecular weight human kininogen (lane 1) or 10 µg of
kininogen after incubation with SspB at 20:1 ratio for 2 h
(lane 2) or 6 h (lane 3). Lane
4 contains 10 µg of two-chain high molecular weight kininogen
that has been processed with plasma kallikrein. Proteins were resolved
by SDS-PAGE utilizing a 5-15% acrylamide gradient gel.
|
|
In a Western blot analysis (Fig. 9),
monoclonal antibody HKH4, which is specific for an epitope in the
N-terminal portion of the heavy chain, detected fragments of ~62 and
40 kDa in the SspB digest, and the higher mass fragment comigrated with
the kininogen heavy chain. A similar pattern was revealed with MBK3, which is specific for bradykinin, and an ~20-kDa fragment was also
detected. MBK3 did not detect the heavy or light chain of two-chain
kininogen, in which bradykinin is excised by plasma kallikrein.
Antibody HKL1, specific for an epitope in the kininogen light chain,
recognized one fragment in the SspB digest, which migrated closely with
the kininogen light chain. Identical results were obtained when
kininogen was treated with SspB at an 80:1 ratio, except that HKH4 and
MBK3 also detected a fragment that was slightly larger than the
expected size of the heavy chain. Therefore, SspB cleaves single-chain
kininogen, producing fragments similar in size to the correctly
processed heavy and light chains. However, bradykinin is not excised
from the putative heavy chain, and there appear to be multiple cleavage
sites.

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Fig. 9.
Western blot of single-chain high molecular
weight kininogen (lane 1) after digestion with SspB for
2 h at 20:1 (lane 2) and 80:1 (lane 3)
kininogen:SspB ratio. Lane 4 contains two-chain high
molecular weight kininogen that has been processed with plasma
kallikrein. The amount of protein loaded was 2 µg in lanes
1 and 4 and 5 µg in lanes 2 and
3. Blots were probed with monoclonal antibodies HKH4,
specific for the N-terminal region of the heavy chain; HKL1, specific
for the C-terminal region of the light chain; and MBK3, specific for
the nonapeptide bradykinin that is excised upon processing with plasma
kallikrein. The leftmost lane of each blot contains
prestained molecular mass markers (New England BioLabs) with the
kDa values indicated on the left.
|
|
SspB Promotes Detachment of Primary Human
Keratinocytes--
Because SspB appears to cleave only a limited
number of host proteins, assays were conducted to evaluate the effect
of SspB on human primary keratinocyte cell culture (Fig.
10). When medium from confluent
keratinocyte cell culture was exchanged with medium supplemented with
mature SspB, the cells maintained a typical adherent morphology for
6 h and then rapidly began to round up and detach from the culture
vessel, such that after 7 h, few adherent cells remained. This
effect was prevented by preincubation of SspB with E-64. Although the
keratinocyte cells were detached from the culture vessel after 7 h
of incubation, they remained viable as evident from trypan blue
staining, even after 24 h of exposure to mature SspB (data not
shown). Therefore, SspB did not exert a direct cytotoxic effect on the
cell monolayer.

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Fig. 10.
Primary human keratinocytes after incubation
for 7 h with medium alone (A) and medium
supplemented with 10 µg/ml SspB
(B) or 10 µg/ml SspB and
28 µM E-64 cysteine protease
inhibitor (C).
|
|
 |
DISCUSSION |
Data presented in this study establish that the Ssp operon of
S. aureus facilitates a novel pathway for protease
maturation, whereby maturation of the SspB cysteine protease is
dependent on the SspA serine protease for removal of the N-terminal
propeptide and for relief of the SspC-mediated inhibition. The SspA
serine protease is itself expressed as an inactive zymogen that is
activated by a metalloprotease aureolysin (10), which also exhibits an N-terminal propeptide and C-terminal catalytic domain (32). Although
the mechanism for aureolysin maturation has not been elucidated, these
steps define a pathway in which maturation of the SspB cysteine
protease requires the sequential activity of metalloproteases and
serine proteases. To our knowledge, a similar operon structure and
sequential cascade pathway for protease maturation have not been
described in other prokaryotic organisms, and several observations
implicate an important role for this proteolytic cascade in promoting
the metastasis of S. aureus infections.
In addition to activating a precursor form of SspA, aureolysin cleaves
fibrinogen-binding protein ClfB at a single site, rendering it unable
to bind fibrinogen (9). SspA exhibits a potent activity in degrading
cell surface fibronectin-binding protein adhesins of S. aureus (7, 8), and our present data also support a role for SspB
in controlling adhesive functions. The fibronectin-binding protein
adhesins of S. aureus bind the N-terminal fragment of fibronectin with high affinity and specificity (29, 33). Although fibronectin possesses several domains that are liberated by a number of
different proteases, SspB preferentially cleaved fibronectin to release
the N-terminal fragment and to a lesser extent, probably also the
C-terminal heparin and fibrin binding domains. Cleavage occurred at
Val258-Arg259-
-Ala260, and this
same site is cleaved by urokinase plasminogen activator (28), which
cleaves fibronectin at just one other site inside of the C-terminal
disulfide bonds to generate fragments of 210, 200, 25, and 6 kDa. Thus,
treatment of fibronectin with urokinase preferentially releases the
25-kDa N-terminal fragment, and SspB mimics this specificity by
generating primarily high molecular mass fragments lacking the
N-terminal domain.
SspB also cleaved the
-chain of fibrinogen at a single site,
Tyr-Arg42-
-Ala43, which is the same site
cleaved by plasmin in both fibrinogen and fibrin to promote an
anticoagulant or fibrinolytic activity (34). Residues 15-42 of the
-chain are also implicated in promoting platelet spreading on fibrin
matrices (35), and removal of this sequence may therefore interfere
with wound healing. Whereas the
-chain of fibrinogen was cleaved
slowly, SspB rapidly removed the C terminus of the
-chain. During
coagulation, the N terminus of fibronectin is cross-linked to the C
terminus of the fibrinogen
-chain by coagulation factor XIII (36,
37), and fibrin matrices that contain fibronectin are much better
substrates for fibroblast adhesion and spreading than those lacking
fibronectin (38). Therefore, by removing both the N-terminal
fibronectin fragment and C-terminal
-chain fragment of fibrinogen,
SspB has the capacity to affect the function and integrity of fibrin
clots. This may be of particular relevance to infective endocarditis,
where the bacteria are enmeshed within platelet-fibrin vegetations on
traumatized heart valves.
Cleavage of kininogen by SspB could also play an important role in
promoting the dissemination of infection. Cleavage of kininogen to
release the vasoactive peptide bradykinin has been reported for a
number of proteases secreted by microbial and parasitic pathogens (39,
40), potentially promoting a proinflammatory response (41). The
enhanced vascular permeability promoted by bradykinin could also
contribute to the ability of bacteria to enter into the bloodstream
from localized tissue infections. Although bradykinin remains
associated with larger proteolytic fragments when kininogen is treated
with SspB, others have shown that conversion of single-chain kininogen
to the two-chain form promotes enhanced attachment to cell surfaces via
the D5 domain of the light chain (42, 43). Because the C-terminal D6
domain of the kininogen light chain binds prekallikrein, this also
serves to deliver prekallikrein to cell surfaces, facilitating its
conversion to active kallikrein, which can then promote release of
bradykinin (44). Furthermore, two-chain kininogen and the isolated D5
domain exert a potent antiadhesive effect on endothelial cells through
the ability of D5 to interfere with vitronectin-dependent
adhesion mechanisms (45, 46). Therefore, proteolysis of single-chain
kininogen by SspB at a site of infection, combined with its activity
toward fibronectin and potentially other as yet unidentified
substrates, could promote a potent antiadhesive effect, disrupting the
integrity of cellular barriers to infection. Thus, our observation that SspB promotes detachment of primary human keratinocytes from cell culture could occur through a number of mechanisms, including also the
targeting of integrins, which has been reported for the SpeB cysteine
protease of S. pyogenes (47).
Intriguingly, the substrate specificity of SspB most closely mimics the
serine protease halystase, present in venom of the common viper,
Agkistrodon halys blomhoffii. As with SspB, halystase cleaved the
-chain of fibrinogen at the same site as plasmin and
also the
-chain, generating a 35- and 33-kDa doublet with an intact
-chain N terminus (48). Halystase also exhibited fibrinolytic
capacity, cleaved Bz-Pro-Phe-Arg-pNA, but not several other
arginine containing substrates, and cleaved high molecular weight
kininogen to release bradykinin. Thus, SspB duplicates many of these
properties. The cleavage specificity of SspB for synthetic substrates,
together with cleavage sites identified in fibrinogen and fibronectin,
indicate that it maintains the specificity of the papain family at the
P2 position but exhibits a strong preference for arginine at P1. This
differs from the SpeB cysteine protease of S. pyogenes,
which is a more typical member of the papain family, being able to
accommodate arginine, lysine, asparagine, alanine, glutamic acid,
glycine, and histidine in the P1 position (27). Thus, SpeB has been
shown to cleave casein and all classes of immunoglobulins as well as
fibronectin, fibrinogen, and kininogen (39, 49-51), whereas SspB of
S. aureus shows no cleavage of casein, IgG, IgA, or serum
albumin and exhibits a strict requirement for arginine at P1. To our
knowledge, a similar substrate specificity has not been reported for
other microbial cysteine proteases.
It is interesting to speculate whether the novel mechanism for protease
maturation we have identified for SspB has enabled the evolution of a
restricted substrate specificity, or alternatively, whether this
specificity has necessitated the evolution of an alternative maturation
mechanism. In the conventional pathway for protease maturation, there
are three distinct stages, as exemplified by the serine protease
subtilisin. These include (i) folding of the protease mediated by its
cognate N-terminal propeptide; (ii) autoprocessing of the bond between
the propeptide and protease domain, resulting in structural
reorganization; and (iii) degradation of the propeptide, which locks
the protease into a stable conformation (23, 24). The SpeB cysteine
protease of S. pyogenes also seems to follow this paradigm,
as evident from the identification of five distinct sites in the
N-terminal propeptide which are cleaved in a stepwise process during
autocatalytic activation (27, 52). Remarkably, although the N-terminal
propeptide of S. aureus SspB possesses a predicted basic
isoelectric point of pI 8.4, it contains 31 lysine residues and just 1 arginine at Arg138 (11). Because the mature SspB protease
appears to be highly selective for cleavage where arginine is preceded
by a hydrophobic amino acid, it appears that the propeptide was not
designed to accommodate an autocatalytic maturation pathway. Thus, the
N-terminal propeptide and mature protease domain are free to evolve
independently of a requirement for cleavage and degradation of the propeptide.
In this respect, our study has established that SspC maintains pSspB as
an inert zymogen, whereas SspA eliminates a requirement for
autocatalytic activation and inactivates the inhibitory activity of
SspC. Studies are in progress to determine whether the N-terminal propeptide of SspB has retained the function of an intramolecular chaperone to facilitate folding of SspB or whether this function is
also satisfied by SspC. Others have shown that the chaperone and
inhibitor functions of the subtilisin propeptide are not obligatorily linked to one another, such that mutations that eliminate inhibitory activity do not interfere with chaperone function (53). Therefore, it
is possible that the N-terminal propeptide of pSspB retains a function
as an intramolecular chaperone. Alternatively, if this function is also
promoted by SspC, then the N-terminal propeptide may possess another
function, possibly in delivering SspB to host cell surfaces and the
extracellular matrix of traumatized tissues.
 |
ACKNOWLEDGEMENT |
We thank Greg Wasney for technical assistance.
 |
FOOTNOTES |
*
This work was supported in part by Operating Grant MOP12669
from the Canadian Institutes for Health Research (to M. J. M.).The costs of publication of this
article were defrayed in part by the
payment of page charges. The article
must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
§
Recipient of a National Sciences and Engineering Research Council
studentship award. Present address: Dept. of Microbiology, Molecular
Biology, and Biochemistry, University of Idaho, Moscow, ID
83844-3052.

Present address: Dept. of Dermatology, Johns Hopkins
University, Baltimore, MD 21287-0900.
¶¶
To whom correspondence should be addressed: S112 Dept.
of Microbiology, Sunnybrook and Womens College Health Science Centre, 2075 Bayview Ave., Toronto, ON M4N 3M5, Canada. Tel.:
416-480-5831; Fax: 416-480-5737; E-mail:
martin.mcgavin@swchsc.on.ca.
Published, JBC Papers in Press, August 30, 2002, DOI 10.1074/jbc.M207162200
 |
ABBREVIATIONS |
The abbreviations used are:
SspA, staphylococcal
serine protease;
Bz-, benzoyl;
CAPS, 3-(cyclohexylamino)propanesulfonic acid;
E-64, trans-epoxysuccinyl-L-leucylamido-(4-guanidino)butane;
K-SFM, serum-free keratinocyte growth medium;
pNA, para-nitroanilide;
pSspB, prepropeptide form of SspB;
SspB, staphylococcal cysteine protease;
SspC, cognate inhibitor of SspB;
Suc, succinyl;
Z, benzyloxycarbonyl.
 |
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