Originally published In Press as doi:10.1074/jbc.M207663200 on September 24, 2002
J. Biol. Chem., Vol. 277, Issue 48, 46020-46025, November 29, 2002
Forced Subunit Assembly in
1
2
2 GABAA
Receptors
INSIGHT INTO THE ABSOLUTE ARRANGEMENT*
Sabine W.
Baumann,
Roland
Baur, and
Erwin
Sigel
From the Department of Pharmacology, University of Bern, CH-3010
Bern, Switzerland
Received for publication, July 30, 2002
 |
ABSTRACT |
The major isoform of the
-aminobutyric acid
type A (GABAA) receptor is thought to be composed of
2
1, 2
2, and 1
2 subunit(s), which surround the ion pore. Definite evidence for the subunit arrangement is lacking. We show here that GABAA receptor
subunits can be concatenated to a trimer that can be functionally
expressed upon combination with a dimer. Many combinations did not
result in the functional expression. In contrast, four different
combinations of triple subunits with dual subunit constructs, all
resulting in the identical pentameric receptor
2
2
1
2
1,
could be successfully expressed in Xenopus oocytes. We
characterized the functional properties of these receptors in respect
to agonist, competitive antagonist, and diazepam sensitivity. All
properties were similar to those of wild type
1
2
2 GABAA
receptors. Thus, together with information on the
crystal structure of the homologous acetylcholine-binding protein (Brejc, K., van Dijk, W. J., Klaassen, R. V., Schuurmans, M.,
van Der Oost, J., Smit, A. B., and Sixma, T. K., (2001) Nature 411, 269-276, we provide evidence for an arrangement
2
2
1
2
1, counterclockwise when viewed from the synaptic cleft. Forced subunit assembly will also allow receptors containing different subunit isoforms or mutant subunits to be expressed, each in a desired position. The methods established here should be applicable to the
entire ion channel family comprising nicotinic acetylcholine, glycine,
and 5HT3 receptors.
 |
INTRODUCTION |
The
-aminobutyric acid type A
(GABAA)1
receptors are the major inhibitory neurotransmitter receptors in the
mammalian brain. They are heteromeric protein complexes consisting of
five subunits, which are arranged pseudo-symmetrically around a central
Cl
-selective channel (1). 18 different subunit isoforms
have been cloned so far (1-7). The major receptor isoform of the
GABAA receptor in the brain most probably consists of
1,
2, and
2 subunits (1,
2, 8-10). The
subunit has been shown to be required for functional
modulation of the receptor channels by benzodiazepines (11, 12).
Different approaches have indicated a 2
:2
:1
subunit
stoichiometry for this receptor (13-16).
The inferred arrangement of subunits around the channel pore is
hypothetical, based on the findings that the GABA-binding site is
located at intersubunit contacts between
and
subunits (17-21)
and that homologous amino acid residues of
and
subunits form
the benzodiazepine-binding pocket (22-28). The observation that
assembly intermediates comprising 
or 
dimers displayed some benzodiazepine or agonist binding, respectively (29), supported conclusions drawn from the former mutation studies. From the crystal structure of the acetylcholine-binding protein (30), a protein homologous to the extracellular domain of the nicotinic acetylcholine receptors and the other members of the superfamily of ligand-gated ion
channels, we can deduce the absolute position of the amino acid
residues involved in the formation of agonist and drug-binding sites in
a subunit in the pentamer. However, this acetylcholine-binding protein
is a homopentamer and gives no information about the arrangement of the
heteromeric GABAA receptors.
In a former study (31) we expressed
-
and
-
tandem
constructs in combination with single
subunits in
Xenopus oocytes and investigated the function of the formed
receptors. The results suggested a possible arrangement




; however, some uncertainty remained. From this work it
also was not clear whether exclusively one or several arrangements of a
given set of subunits is possible.
In the present study we aimed to express GABAA receptors
from various combinations of linked constructs containing two and three
subunits. A single pentameric arrangement made of
1,
2, and
2 subunits was found to result in
functional ion channels. We describe its properties toward the agonist
GABA, the competitive antagonist bicuculline, and the positive
allosteric modulator diazepam. The described techniques will allow
forced assembly and functional study of GABAA and related
receptors of defined subunit arrangements.
 |
EXPERIMENTAL PROCEDURES |
Construction of Tandem and Triple Subunit cDNAs--
For
simplicity, we use the following:
for modified rat
1,
for rat
2, and
for rat
2. The modified rat
subunit differs from the
rat
by one amino acid residue, which confers the subunit-specific bd24 antibody recognition (32, 33). This property has previously been
used to exclude proteolysis of the linked constructs (31). The antibody
only reacts if the N-terminal of the
subunit is free. Therefore,
the same test was not feasible for most of the present constructs.
Other evidence was used to make proteolysis unlikely (see below).
Tandem constructs for
-
,
-
,
-
, and
-
with
various linker lengths were made similar as described in Baumann
et al. (31). In the following, numbers between two subunit
symbols describe the length of the introduced synthetic linker. Triple
constructs were prepared from tandem constructs as exemplified for the
-26-
-23-
(
-
-
) construct. The
-26-
(
-
)
tandem construct was cut by HindIII in the
subunit and the vector behind the gene to yield a 7-kb fragment containing the sequence of the vector, the
2 subunit, the linker,
and the beginning of the
2 subunit. This vector fragment
was dephosphorylated with shrimp alkaline phosphatase (USB) in 10 mM Tris-HCl, pH 8.0, and 100 mM
MgCl2 for 1 h at 37 °C. The
-23-
(
-
)
(31) tandem construct was cut by HindIII in the
subunit and the vector behind the gene to yield a 2-kb fragment
containing the sequence of the second half of the
subunit, the
linker, and the
subunit. The two fragments were ligated, and proper
ligation was checked by restriction analysis. The construct
-10-
-23-
(
-
-
) was made accordingly from
-10-
(31) and
-23-
. The triple constructs
-23-
-10-
(
-
-
, from
-23-
and
-10-
),
-23-
-10-
(
-
-
, from
-23-
and
-10-
), and
-23-
-10-
(
-
-
from
-23-
and
-10-
) were prepared similarly
using BamHI. The following linkers have been introduced:
-26-
:
Q5A3PAQ2(QA)2A2PA2Q5,
-10-
: Q10,
-23-
:
Q3(Q2A3PA)2AQ5.
Expression of Linked Constructs in Xenopus Oocytes--
Capped
cRNAs were synthesized (Ambion, Austin, TX) from the linearized pCMV
vectors containing the different tandem or triple constructs or the
single
1,
2, and
2
subunits, respectively, and from the vector pVA2580 (34) encoding a
neuronal voltage-gated sodium channel (Na). A poly-A tail of about 400 residues was added to each transcript using yeast poly-A polymerase
(USB, Cleveland, OH). The concentration of the cRNA was quantified on a
formaldehyde gel using Radiant Red stain (Bio-Rad) for visualization of
the RNA and known concentrations of RNA ladder (Invitrogen) as
standard on the same gel. cRNA combinations of triple/Na,
triple/
/Na, triple/
/Na, triple/
-
/Na, triple/
-
/Na
(triple =
-
-
,
-
-
, or
-
-
),
-
/
2/Na,
-
-
/
-
/Na, and
-
-
/
-
/Na
were precipitated in ethanol/isoamylalcohol (19:1) and stored at
20 °C. For injection, the alcohol was removed and the cRNAs were
dissolved in water. Isolation of oocytes from the frogs, culturing of
the oocytes, injection of cRNA, and defolliculation were done as
described earlier (35). Oocytes were injected with 50 nl of the cRNA
solution. For cRNA combinations of the
2-containing
triple constructs with the tandem construct, ratios of 50:10
nM and 10:10 nM were investigated. The
combination of single
1,
2, and
2 subunits was expressed at 10:10:50 nM. To
allow standardization of expressed GABA currents cRNA coding for the
voltage-gated sodium channel was always added to a concentration of 40 nM. The injected oocytes were incubated in modified
Barth's solution (10 mM HEPES, pH 7.5, 88 mM
NaCl, 1 mM KCl, 2.4 mM NaHCO3, 0.82 mM MgSO4, 0.34 mM
Ca(NO3)2, 0.41 mM
CaCl2, 100 units/ml penicillin, 100 µg/ml streptomycin)
at 18 °C for 2 days before the measurements.
Two-Electrode Voltage-Clamp Measurements--
All measurements
were done in medium containing 90 mM NaCl, 1 mM
MgCl2, 1 mM KCl, 1 mM
CaCl2, and 5 mM HEPES, pH 7.4, at a holding
potential of
80 mV. For the determination of maximal current
amplitudes 1 mM GABA (Fluka, Buchs, Switzerland) was
applied for 20 s. Voltage-dependent sodium currents
were determined by a potential jump from a holding potential of
100
to
15 mV. As the modes of activation of the GABA receptor channel and
the voltage-dependent sodium channel differ, the
measurements of the two channels do not interfere with each other. The
GABA-evoked peak current amplitude was standardized to the co-expressed
sodium current amplitude of the same oocyte. The mean standardized
current amplitude of at least 3 oocytes per subunit combination was
then compared with the mean standardized wild type current amplitude.
GABA-evoked currents (at 8-12% of the maximal current amplitude) were
inhibited by varying concentrations of bicuculline methiodide (RBI).
Relative current stimulation by diazepam was determined at a GABA
concentration evoking 2-5% of the maximal current amplitude in
combination with varying concentrations of diazepam (DZ) (Roche) and
expressed as
((I(GABA+DZ)/I(GABA))
1)×100%.
 |
RESULTS |
Engineering of Functional Triple Subunit Constructs--
We have
shown previously (31) that it is feasible to covalently link
and
subunits of the GABAA receptor while retaining full
receptor function (31). These linked constructs allowed us to propose a
possible arrangement of subunits in the
1
2
2 receptor. However,
some uncertainty remained due to a possible rearrangement of dual
subunit constructs. We now have linked three subunits in different
sequence and expressed them in combination with tandem constructs.
Triple subunit constructs unlike dual subunit constructs cannot
rearrange for topological reasons.
In the following, the sequence of subunits in multiple subunit
constructs is always described as the C-terminal of the first subunit
linked to the N-terminal of the second subunit. To link the
subunit
to either side of the existing tandem constructs
-10-
and
-23-
, linker lengths for the new connections had to be
established. To test functionality of these linkers, dual constructs
-
,
-
,
-
, or
-
were co-expressed with
-
or
-
constructs and single
or
subunits to yield receptors of the composition 2
2
1
, e.g.
-
/
-
/
(data not shown). The required linker lengths for
functional expression were found to be 26 amino acid residues for
-
, 10 amino acid residues for
-
, and 23 residues for
-
. For a
-
tandem construct, linkers up to 25 amino acid
residues in length were tested but were found to result only in very
small functional channel expression. In the following, the triple
constructs
-
-
,
-
-
,
-
-
,
-
-
, and
-
-
were prepared.
Expression of Receptors with Different Arrangements of Linked
Subunits--
If the presence of 2
, 2
, and 1
subunit(s) in a
pentamer is assumed, six different arrangements of
,
, and
subunits are possible (Fig. 1). Of this
stoichiometry we tested first arrangements containing one
and two
each of
and
in an alternating fashion. Assembly studies of
Tretter et al. (15) suggest such an alternating arrangement
because expression of either
and
or
and
leads to dimers
only. In these cases either a
or
subunit is missing, respectively, to continue assembly. Expression of
and
,
in contrast, leads to the formation of tetra- and pentamers. Two alternating arrangements are possible, namely 



and




. They are the most probable arrangements as they seem
to contain the inferred two 
and 
subunit interfaces
required for the formation of two GABA- and one benzodiazepine-binding
sites. As the subunits are not symmetrical, only one of these two
alternating arrangements is predicted to form the correct subunit
interfaces for establishing binding sites.

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Fig. 1.
Six different arrangements are theoretically
possible from 2 , 2 ,
and 1 subunit(s). Only two of them (in
the upper panel) have 2 - and 1 - subunit
contacts necessary for the assumed benzodiazepine and GABA-binding
sites. At present, we can directly exclude the upper right
and the two arrangements in the middle panel and confirm the
upper left as the functional arrangement of the
1 2 2 GABAA
receptor (read anti-clockwise).
|
|
With our triple construct
-
-
we show that the arrangement




is not functional (Fig.
2, second column). This was
not unexpected after the earlier finding, which showed that expression of the
-
construct with single
subunits resulted in decreased current amplitudes as compared with wild type receptors.
-
-
did not result in functional channels upon expression in combination with
,
-
, or
-
, or very tiny currents in combination
with
or
(Fig. 2, columns 4-8). In contrast,
-
-
could be complemented with
-
(Fig.
3). Similarly,
-
-
cannot be
complemented by
,
, or
-
(Fig. 2, columns 9-11)
but by
-
(Fig. 3).

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Fig. 2.
Maximal current amplitudes evoked by 1 mM GABA for several combinations of triple constructs with
tandem constructs or single subunits resulting in very little
functional expression. The GABA-evoked current amplitudes were
standardized to the current amplitude of the voltage-gated sodium
channel expressed in the same oocyte. Measurements were in each case
done in 5-6 oocytes from two different batches of oocytes.
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Fig. 3.
Maximal current amplitudes evoked by 1 mM GABA for several combinations of triple constructs with
tandem constructs shown to result in the functional expression.
The GABA-evoked current amplitudes were standardized to the current
amplitude of the voltage-gated sodium channel expressed in the same
oocyte. Measurements were in each case done in 5-6 oocytes from two
different batches of oocytes.
|
|
These observations all pointed to a channel with the subunit
arrangement 



. Fig. 3 shows indeed the successful
functional expression of channels from different combinations of triple
and dual subunit constructs. All these combinations
(
-
-
/
-
,
-
-
/
-
,
-
-
/
-
, and
-
-
/
-
) actually result in the identical arrangement of
subunits around the pore, and they can be seen as permutations of the positions of the linkers around the five subunits (Fig. 4). When
-
-
was expressed in
combination with
-
at a stoichiometry of 1:1, currents amounted
only to about 25% (10 oocytes, 2 batches of oocytes) of the amplitude
observed upon expression of loose subunits
,
, and
at 1:1:5.
Normal expression levels were observed for
-
-
and
-
expressed at 5:1 (Fig. 3). The reason for this increased requirement
for
-
-
is not clear.

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Fig. 4.
The combinations of triple and dual subunit
constructs from Fig. 3 shown to result in the functional
expression of pentamers that are identical. The arrangement
    (read anti-clockwise) is obtained in each case with the
linker between the subunits in different positions.
|
|
As mentioned before, receptors with a different stoichiometry and/or
arrangement from the one discussed above were also tested for
functional expression. Triple constructs
-
-
and
-
-
and dual constructs
-
and
-
(31) when expressed alone did
not result in functional channel expression. From the measurements of
maximal current amplitudes evoked by application of GABA (Fig. 2) we
can also exclude the arrangements 



, 



,




, 



, 



, 



,




, 



, and 



. These results
make it very likely that 



is indeed the functional
arrangement of the
1
2
2 receptor.
The fact that no or very small currents were observed during linker
length optimization and for many of the above mentioned subunit
combinations indicates that proteolysis in the linker regions is not
occurring to a significant extent. Small currents as observed, for
example, for
-
-
/
and
-
-
/
can be thought to
reflect mis-assembled channels. These channels are not
necessarily silent, but are not formed to a significant extent.
Concentration-response Properties of Receptors Made from Linked
Constructs--
To characterize receptors with the subunit arrangement




made from linked constructs we investigated their
response properties to the agonist GABA and the competitive antagonist
bicuculline. First, we studied the GABA concentration-response
properties of the tandem construct
-
in combination with single
2 subunits. Compared with receptors made from single
subunits (wild type) we observed a slight rightward shift (2.4-fold;
Fig. 5B). A similar 2-fold
shift had already been observed for the combination of
-
with
single
subunits (31). Next, three of four combinations of triple
constructs with tandem constructs that were proven functional before
(Fig. 3) were characterized in their GABA concentration-response properties. Fig. 5A shows representative current traces
obtained with the subunit combination. All of them behaved very
similarly, showing properties similar to wild type receptors regarding
EC50 values (Fig. 5 and Table
I).
-
-
/
-
was only
analyzed twice and had an average EC50 of 124 µM in these experiments.

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Fig. 5.
A, representative current traces of a
GABA concentration-response experiment for the construct combination
- - / - . Digitized traces were recorded using MacLab
(ADInstruments). The vertical bars above the traces
represent the duration of the GABA application. B, GABA
concentration-response curves of
1 2 2 receptors made from
single subunits ( ), - tandem constructs co-expressed with
single 2 subunits ( ), triple construct - -
combined with - ( ), - - combined with - ( ),
and - - combined with - ( ). All curves obtained from
construct combinations are very similar compared with those from
receptors made from single subunits. Mean values with S.E. from 4-5
oocytes from two batches for each subunit combination are shown.
Individual curves were first normalized to the observed maximal current
amplitude and subsequently averaged.
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Table I
Agonist, competitive antagonist, and benzodiazepine modulatory
properties of identically arranged     receptors but made
from different combinations of triple and dual subunit constructs. The
data were averaged from 4-5 oocytes from 2 different batches of
oocytes each. Data are given as mean ± SE.
|
|
Fig. 6 shows a summary of inhibition
experiments by the competitive inhibitor bicuculline of GABA-induced
currents on all subunit construct combinations resulting in functional




receptors except
-
-
/
-
. The
obtained bicuculline concentration-response curves were very similar to
those of the receptor made from single subunits. Table I summarizes the
agonist and competitive antagonist properties of the different
constructs. From these results we can conclude that the linkers used
here between the subunits have little influence on the apparent
affinity for GABA induced channel opening and the inhibition by
bicuculline.

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Fig. 6.
Bicuculline concentration-response curves
of
1 2 2
receptors made from single subunits or triple constructs combined with
dual constructs (combinations and symbols are the same as in Fig.
5B). Bicuculline was applied in increasing
concentrations together with a GABA concentration eliciting 8-12% of
the maximal current amplitude. Mean values with S.E. from 4-5 oocytes
from two batches for each subunit combination are shown. Individual
curves were normalized to the current found in the absence of
bicuculline and subsequently averaged.
|
|
Diazepam Responsiveness of Receptors Made from Linked
Constructs--
It has earlier been observed that stimulation by
diazepam of currents elicited by GABA in oocytes expressing
:
:
= 1:1:1 is smaller and more variable than in oocytes
expressing
:
:
= 1:1:5 (36). Therefore, it was interesting
to examine receptors formed from triple and tandem constructs in this
respect. The response to increasing concentrations of diazepam did not
markedly differ from receptors containing loose subunits (Fig.
7) regarding the concentration-dependence
of current stimulation. However, there was a difference regarding
maximal stimulation and variability in different oocytes of this value.
Although stimulation by diazepam of currents elicited by GABA in
oocytes expressing
:
:
= 1:1:5 centered at about 170% and
was quite variable in different oocytes, a value of about 270% with
little variation was observed, provided the
2 subunit
was covalently linked to other subunits to give
-
-
/
-
.
Fig. 8 documents this by comparing
diazepam stimulation in oocytes either expressing
:
:
= 1:1:5 or covalently linked constructs
-
-
:
-
= 1:1.
The combinations
-
-
/
-
,
-
-
/
-
, and
-
/
also showed values for maximal stimulation, which were higher than those found for wild type receptors and had small variations (data not shown). It has been observed earlier that the
stimulation by diazepam decreases in oocytes injected with cRNA coding
for
,
, and
during expression time (36). This phenomenon
seemed not to occur in oocytes expressing linked subunits (not
shown).

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Fig. 7.
Diazepam dose-response curves of
1 2 2
receptors made from single subunits or triple constructs combined with
dual constructs (combinations and symbols are the same as in Fig.
5B). Diazepam was applied in increasing
concentrations together with a GABA concentration eliciting 2-5% of
the maximal current amplitude. Mean values with S.E. from 4-5 oocytes
from two batches for each subunit combination are shown. Individual
curves were normalized to the current in the absence of diazepam and
subsequently averaged.
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Fig. 8.
Comparison in extent and variability of the
relative current stimulation by diazepam in
/ /
GABAAreceptors and covalently linked
- - / - receptors. The figure shows a frequency
distribution. Data were grouped in bins for their stimulation by
diazepam ((IGABA+DZ/IGABA) 1)×100%. The bin
size was 40%. Frequency distributions were fitted with a Gauss
distribution. Open bars are observations in non-linked
receptors and closed bars in linked receptors.
|
|
 |
DISCUSSION |
In the present study we used covalently linked subunits of the
GABAA receptor to study the arrangement of subunits in
1
2
2 receptors. We examined
receptors made from combinations of triple and dual subunit constructs
containing
1,
2, and/or
2
subunits in different orders. We present direct evidence that
1
2
2 receptors have a
subunit composition and relative arrangement of 



from N-terminal to C-terminal. It should be stated that we restricted ourselves to looking at the ability of the subunit combinations to form
functional ion channels. For combinations that did not result in
function, we cannot say at present whether this is due to insufficient
stability of constructs, or due to assembly problems, or whether the
receptors reach the surface membrane and are unable to open.
The majority of GABAA receptors contains
,
, and
subunits (9, 37-40). This subunit composition can be reached by
combining either three subunits of one type with one subunit each of
the other two types or two subunits each from two types with one
subunit of the third type. The former stoichiometry has been excluded for
3
2
2 and
1
2
2 receptors by
electrophysiological characterization of mutant receptors (13, 14). For
the latter stoichiometry both receptors with 2
2
1
and
2
1
2
have been suggested. A 2
2
1
stoichiometry is
favored by electrophysiological data (14), investigations using
immunoprecipitation (15), and fluorescence energy transfer studies
(16). However, it has been reported that also two
subunits can
occur within the same pentamer. This possibility has been suggested on
the basis of co-occurrence of isoforms of the
subunit within the
same receptor molecule, where
2
3 and
2S
2L pairings have been detected in
immunoprecipitation experiments (41, 42). We found that only
combinations of triple and dual constructs, which resulted in the
arrangement 



, therefore containing 2
, 2
, and 1
subunit(s), were functionally expressed with properties very similar to
receptors made from single subunits. Combinations of subunits and/or
linked subunit constructs that would result in a different
stoichiometry or a different arrangement were not functional. Our study
is limited to
1,
2, and
2
containing receptors. It is not clear whether receptors containing
different isoforms of these subunit types have the same stoichiometry
and arrangement as the
1
2
2
receptor. Taking into account that for the formation of GABA-binding
sites defined interfaces must be formed, it is likely that all


, 

, and 

(4, 43) receptors follow the same
building plan.
When we expressed triple constructs in combination with tandem
constructs to form 



receptors we observed
concentration-response properties of the resulting receptors very
similar to receptors made from single, individual subunits. The linkers
between the subunits do not strongly affect function. Only in one case
did we observe a slight decrease in the Hill coefficient. This
coefficient is 1.0 in the case of
-
-
/
-
as compared with
1.2-1.4 for all other receptors (Table I). This observation might
indicate a slightly altered gating behavior of the receptor channel.
Horenstein et al. (44) suggested an asymmetric turning of
the subunits upon channel opening. They investigated 
receptors
and proposed that 4 subunits (2
and 2
) turn in the same
direction, whereas 1
subunit turns in the opposite direction. This
subunit can be thought to be replaced by the
subunit in the


receptor. In this case the linker between
and
in the
-
-
construct could impair the suggested movement of the linked
subunits, which could lead to the observed decrease of the Hill
coefficient. This movement, however, did not seem to be disturbed in
the
-
dual construct when expressed in combination with the
-
-
triple construct (not shown). A dual subunit construct
might be more flexible than a triple construct. Introduction of a
shorter linker into the triple construct could confirm the above hypothesis.
For all receptors formed from linked subunits we observed a
2.0-3.5-fold shift to the right in the GABA concentration-response curves compared with receptors made from single subunits. On one hand
this shift could be due to changed binding or gating properties of the
receptor pentamers by linkage. On the other hand it has been observed
frequently that expression of single
,
, and
subunits in
oocytes or HEK cells leads to a mixed population of 

and

receptors (36). The EC50 of 
receptors is
about 8 µM, that of 

receptors about 41 µM (45). Expression of linked constructs does not
allow the formation of pentameric 
receptors, and the
2.0-3.5-fold shift of the concentration-response curve further to the
right could at least be partly due to expression of pure 

receptors. This view is supported by the markedly higher stimulation of
GABA-induced currents by diazepam of receptors made from linked
subunits. Presence of 
in 

receptors decreases apparent
diazepam stimulation (36).
Our approach leads to the relative sequence of subunits in the receptor
only, and does not allow a statement about the absolute arrangement,
e.g. the sequence when viewed from the synaptic cleft. The
determination of the crystal structure of the acetylcholine-binding protein (30) leads to an insight into the absolute configuration of the
extracellular parts of the subunits and interfaces of the nicotinic
acetylcholine receptor. The acetylcholine-binding protein is a
bacterial protein homologous to the extracellular domain of the
nicotinic acetylcholine receptor of higher organisms. The GABAA receptor belongs to the same superfamily of
ligand-gated ion channels and is therefore structurally homologous to
the nicotinic acetylcholine receptor. The knowledge of amino acid
residues that form agonist and benzodiazepine-binding sites,
respectively (for review see Ref. 27) allows us to conclude on which
side of the
subunit
and
subunits are positioned when viewed
from the synaptic cleft. Therefore, the absolute arrangement of
the
1
2
2 receptor is very
likely 



from the N terminus to the C terminus, read in
anti-clockwise direction when viewed from the synaptic cleft
(Fig. 9).

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|
Fig. 9.
View from the synaptic cleft showing the
absolute subunit arrangement of the GABAA receptor.
(+) and ( ) refer to the asymmetric sides of the subunits. F65 (17,
19), Y62 (46, 47), and F77 (25) refer to the homologous amino
acid residues involved in the binding of agonist (A) and
benzodiazepine drugs (B).
|
|
This work will allow the study of the roles of any individual site
located on an
or
subunit, which was impossible thus far because
there were always two sites on the two subunits affected by a mutation
in 2
2
1
GABAA receptors. The possibility of
a forced subunit assembly will enable targeted introduction of a mutation in only one subunit. This will, for example, allow dissection of the two low affinity agonist sites located at the 
subunit interface. Forced subunit assembly will have further impact on the characterization of receptor forms containing different isoforms of
the same subunit subtypes. Receptors that are made of 4 or 5 different
subunits cannot be analyzed by recombinant expression of the mixture of
the single subunits because many different receptor subtypes can be
formed. Expression of predefined sequences of subunits in triple and
tandem constructs will allow the study of pharmacological properties of
defined receptor isoforms. As the GABAA receptor belongs to
a superfamily of ligand-gated ion channels, methods described here are
applicable to neuronal and non-neuronal nicotinic acetylcholine
receptors, glycine receptors, and 5HT3 receptors.
 |
ACKNOWLEDGEMENTS |
We thank Heleen van Hees for help in
preparing the linked subunit constructs and Dr. V. Niggli for carefully
reading the manuscript.
 |
FOOTNOTES |
*
This work was supported by the Swiss National Science
Foundation Grant 3100-064789.01/1.The costs of publication of this
article were defrayed in part by the
payment of page charges. The article must therefore be hereby marked
"advertisement" in
accordance with 18 U.S.C. Section
1734 solely to indicate this fact.
To whom correspondence should be addressed: Dept. of Pharmacology,
Friedbuehlstrasse 49, CH-3010 Bern, Switzerland. Tel.: 41-31-632-3281;
Fax: 41-31-632-4992; E-mail: erwin.sigel@pki.unibe.ch.
Published, JBC Papers in Press, September 24, 2002, DOI 10.1074/jbc.M207663200
 |
ABBREVIATIONS |
The abbreviations used are:
GABAA,
-aminobutyric acid type A;
DZ, diazepam.
 |
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