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Originally published In Press as doi:10.1074/jbc.M303481200 on April 23, 2003
J. Biol. Chem., Vol. 278, Issue 26, 23624-23629, June 27, 2003
Identification of a Sequence in Human Toll-like Receptor 5 Required for the Binding of Gram-negative Flagellin*
Steven B. Mizel ,
A. Phillip West and
Roy R. Hantgan ¶
From the
Departments of Microbiology and
Immunology and ¶Biochemistry, Wake Forest
University School of Medicine, Winston-Salem, North Carolina 27157
Received for publication, April 3, 2003
, and in revised form, April 22, 2003.
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ABSTRACT
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Flagellins from Gram-negative bacteria activate inflammatory cells by a
toll-like receptor 5 (TLR5)-dependent signaling pathway. We have examined the
interaction between flagellin and TLR5 using an in vitro binding
assay. Purified recombinant His-tagged flagellin from Salmonella
enteritidis bound to TLR5 in detergent lysates from COS-1 cells
transiently transfected with a human TLR5 expression plasmid. Flagellins from
Salmonella typhimurium and Escherichia coli also bound to
TLR5. The specificity of this interaction was demonstrated by its
concentration dependence and lack of TLR5 binding to a biologically inactive
form of flagellin or to a His-tagged non-flagellar protein. Flagellin bound to
the extracellular domain of TLR5 expressed on the surface of COS-1 cells and
to a soluble, monomeric form of the extracellular domain (amino acids
1636). Although a TLR5 extracellular domain containing amino acids
1407 retained flagellin binding activity, binding was not evident with
a TLR5 peptide encoding residues 1386. Conversely, a peptide containing
amino acid residues 386636 retained flagellin binding. Thus it is
likely that amino acids 386407 is a binding site for flagellin. This
sequence contains a putative leucine-rich repeat. These results support the
conclusion that flagellin signaling via TLR5 involves a direct interaction
between flagellin and a leucine-rich region in TLR5. We also show that the
NH2-terminal 358 amino acids of TLR5 play an important role in its
signaling activity. Our results provide, for the first time, a molecular basis
for the agonist specificity of a TLR.
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INTRODUCTION
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Activation of the innate immune response by bacteria is mediated by a group
of molecules that have collectively been termed modulins
(1). This family of molecules
includes a wide variety of substances including lipopolysaccharide
(LPS)1 from
Gram-negative bacteria, lipoteichoic acid from Gram-positive bacteria, several
different viral envelope glycoproteins, and flagellins from Gram-negative
bacteria. Monocytes, macrophages, neutrophils, and epithelial cells respond to
modulins by producing proinflammatory mediators such as tumor necrosis factor
, interleukin-1 , and nitric oxide. Many bacterial modulins signal
via toll-like receptors (TLR), a family of cell surface molecules that possess
a leucine-rich extracellular domain and a cytoplasmic toll/interleukin-1
receptor homology domain
(2).
Although substantial progress has been made in our understanding of the
intracellular pathways involved in TLR signaling, we have very little
knowledge of the factors that determine the specificity of individual TLRs.
For example, the common structural features that allow a diverse group of
agonists such as LPS
(35),
heat shock protein 60 (6),
respiratory syncytial virus F protein
(7), and Escherichia
coli P fimbriae (8) to
signal via TLR4 are not readily apparent. Although investigators have accepted
the notion that TLRs recognize pathogen-associated molecular patterns
(9), we have a limited
understanding of the structural elements within TLRs that determine their
selectivity for specific agonists. The interaction of LPS with CD14 and TLR4
has been the most extensively studied system. LPS binding to CD14 appears to
be required for the subsequent interaction of LPS with TLR4
(10) and MD-2, a
TLR4-associated protein that may facilitate or enhance the cell surface
expression of TLR4 (11).
Difference in LPS structure may influence the quality of these interactions
(12). Although the region of
TLR4 that is involved in the recognition of LPS has not been defined, the
structural features of CD14 that are involved in the recognition of LPS have
been well characterized
(1316).
In a recent study, it was suggested that peptidoglycan from Staphylococcus
aureus can bind directly to the extracellular domain of TLR2
(17). However, soluble CD14
was found to enhance this interaction, leaving open the possibility that CD14
or similar proteins might be mediators of the interaction between
peptidoglycan and TLR2.
Recent reports from our laboratory and others have demonstrated that
flagellins from Gram-negative bacteria activate a range of inflammatory cells
via a TLR5-dependent signaling pathway
(1820).
As with other TLRs, flagellin signaling via TLR5 involves the activation of
the interleukin-1 receptor-associated kinase
(20,
21). Although the TLR5
dependence of Gram-negative flagellin signaling has been well documented, the
structural requirements for the interaction between flagellin and TLR5 are
only partially understood. Structure/function studies with soluble flagellin
indicate that the amino and carboxyl constant regions are most critical for
TLR5 signaling (22,
23). We have shown that
flagellin is active at concentrations in the picomolar to nanomolar range
(24), a finding that is
consistent with a very high affinity interaction. However, it was not known if
flagellin binds directly to TLR5 or initially interacts with a co-receptor
that acts in a manner similar to CD14. We recently developed a robust TLR5
expression system using transiently transfected COS-1 cells to elucidate the
mechanism for flagellin-induced self-tolerance
(20). Because we have found it
difficult to express full-length TLR5 or the extracellular domain of TLR5 in
bacteria or yeast,2 we
have used the COS-1 expression system to determine whether purified flagellin
can bind directly to TLR5 and if so, to define the region of TLR5 required for
binding.
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EXPERIMENTAL PROCEDURES
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Cells and ReagentsCOS-1 cells and RAW 264.7 cells were
maintained in Dulbecco' s modified Eagle's medium with 10% fetal bovine serum
and gentamicin. Purified, endotoxin-free recombinant His-tagged Salmonella
enteritidis, Salmonella typhimurium, and E. coli flagellins were
prepared as previously described
(24). In the case of S.
typhimurium, we prepared the two types of flagellin, FliC and FljB, that
are produced by this strain of bacteria. We also prepared a mutant S.
enteritidis flagellin 229 that lacks biological activity
(24). Recombinant His-tagged
AlgB from Pseudomonas aeruginosa
(25) was kindly provided by
Dr. Daniel Wozniak (Wake Forest University School of Medicine). Anti-FLAG
antibody was obtained from Sigma and high affinity anti-HA antibody from Roche
Diagnostics.
PlasmidsThe p3XFLAG-CMV-14-TLR5
(20) contains a full-length
cDNA encoding human TLR5-FLAG. The HA-tagged human TLR5 expression plasmid was
prepared by cloning an amplified TLR5 PCR product into the pMH vector (Roche
Diagnostics). A cDNA encoding the signal sequence and extracellular domain of
TLR5-ED-(1636) was generated by PCR using the forward primer,
5'-gccattcccaagcttccgccaatgggagaccacctggacctt-3' and the reverse
primer, 5'-gctcgatgcggatccctttaagacttcctcttcatc-3'. The resultant
product was directionally cloned into p3XFLAG-CMV-14 at the HindIII
and BamHI sites. The truncated forms of the extracellular domain of
TLR5 were also generated by PCR and were cloned into the p3XFLAG-CMV vector.
All products were sequenced to ensure that mutations were not introduced
during the PCR. Although a signal sequence is encoded in the first 28 amino
acids of
TLR5-(2628),
we have referred to each peptide on the basis of the unprocessed polypeptide
(e.g. 1636). Mutations were introduced into the TLR5 sequence
using the QuikChange XL site-directed mutagenesis kit (Stratagene). The
presence of mutations was confirmed by sequence analysis. The
p3XFLAG-myc-CMV-23 expression vector was obtained from Sigma. Proteins
expressed with this vector contain an NH2-terminal preprotrypsin
signal sequence followed by a 3x FLAG tag and a COOH-terminal Myc
tag.
Binding of Flagellin to TLR5 in Cell LysatesCOS-1 cells (2
x 106) were transiently transfected with TLR5 expression
plasmids using FuGENE 6 (Roche Diagnostics) and rested for 48 h prior to use.
The binding of flagellin to TLR5 in detergent cell lysates was done in the
following manner. Cells were lysed in 0.5 ml of immunoprecipitation buffer
containing 0.4% Nonidet P-40 and protease inhibitors
(20) and then the lysates were
centrifuged at 23,000 x g for 3 min in a refrigerated
centrifuge to remove insoluble material. The supernatants were incubated on a
rotator in the presence or absence of the indicated concentration of
His-tagged flagellin or AlgB and 25 µl of Talon metal affinity resin
(Clontech) for2hat4 °C. The samples were centrifuged to remove unbound
material and then the Talon beads were washed 3 times with immunoprecipitation
buffer, pH 7.5, containing 10 mM imidazole. The samples were then
boiled for 5 min in gel sample buffer and electrophoresed in 7.5%
SDS-polyacrylamide gels. The proteins were electrophoretically transferred to
a polyvinylidene difluoride membrane (100 V, 1 h). Western blot analysis was
done as described previously
(20) using anti-FLAG or HA
antibodies.
Flagellin Binding to Cell Surface-associated TLR5To assess
the binding of flagellin to intact cells, the cultures of transfected COS-1
cells were placed on ice in ice-cold medium in the presence or absence of 4.8
x 108 M S. enteritidis
flagellin for 30 min at 4 °C. Unbound flagellin was removed by repeated
washing of the cell monolayers with ice-cold medium. Cell lysates were
prepared as described above and incubated with the Talon metal affinity resin
without additional flagellin.
Sedimentation Velocity Measurements of TLR5-EDSamples were
characterized by sucrose density gradient sedimentation as described
(29). COS-1 cells were
transiently transfected with TLR5-ED-(1636) or TLR5-ED-(1425)
and lysates were prepared. A 200-µl aliquot of each lysate was layered over
a 5-ml 520% sucrose gradient and centrifuged for 5 h at 50,000 rpm (20
°C). Fractions (0.5 ml) were collected and analyzed for the presence of
TLR5 by Western blotting. The positions of samples within the gradient were
converted to sedimentation coefficients based on the profiles of samples of
known s20,w value
(29).
Inducible Nitric-oxide Synthase Promoter Activation in RAW 264.7
CellsRAW 264.7 cells are TLR5-negative, but respond to flagellin
when transiently transfected with a TLR5 expression plasmid
(41). To assess the biological
activity of truncated forms of TLR5, RAW 264.7 cells were transiently
co-transfected with an expression plasmid encoding full-length human or
truncated forms spanning either amino acid residues 386857 or
426857, a flagellin-responsive inducible nitric-oxide synthase
promoter/luciferase reporter plasmid, and pRL-TK/luciferase (to control for
transfection efficiency), rested overnight, and then stimulated for 6 h with
1010 M flagellin. Inducible
nitric-oxide synthase promoter-dependent and constitutive Renilla
luciferase activities were measured using the Promega dualluciferase assay
system.
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RESULTS
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Flagellin Binds in a Specific Manner to TLR5 in Detergent Lysates from
COS-1 CellsDetergent lysates were prepared from COS-1 cells
transiently transfected with an expression plasmid encoding human TLR5-HA and
incubated in the presence or absence of either 4.8 x
108 M His-tagged flagellin or
His-tagged AlgB and Talon metal affinity resin
(Fig. 1a). TLR5-HA
associated with the Talon resin, but only in the presence of flagellin.
Incubation in the absence of flagellin or with the negative control AlgB
resulted in background levels of TLR5 association. These results are
consistent with a specific interaction between flagellin and TLR5. The extent
of complex formation was dependent on the concentration of flagellin. Binding
was detected with as low as 8.5 x 1010
M flagellin (Fig.
1b, lane 2) and was maximal at concentrations
above 3.4 x 109 M (lane
4). These concentrations of flagellin are in the range of those required
for biological activity (20,
21,
24). To obtain additional
evidence demonstrating the specificity of the flagellin/TLR5 interaction, we
tested the ability of flagellins from S. typhimurium and E.
coli as well as a S. enteritidits flagellin mutant 229 that is
biologically inactive (24). In
the case of S. typhimurium, we tested FliC and FljB, the phase
variable forms of flagellin produced by this organism. The two proteins
possess equal biological activity. To ensure that flagellin was binding to
TLR5 and not the HA tag, we used an expression plasmid encoding TLR5-FLAG. As
shown in Fig. 1c, the
S. typhimurium and E. coli proteins were all able to bind
TLR5. However, the 229 mutant exhibited little if any ability to bind TLR5.
Thus these results provide additional support for the specificity of flagellin
binding to TLR5.

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FIG. 1. Flagellin binds to TLR5 in detergent lysates of COS-1 cells.
a, detergent lysates were prepared from COS-1 cells transiently
transfected with pMH-TLR5 (HA tag) and incubated in the absence (lane
1) or presence of 2.4 x 108
M flagellin (lane 2) or Alg B (lane 3) and Talon
metal affinity resin for 2 h at 4 °C. The Talon resin in each sample was
washed 3 times with immunoprecipitation buffer, pH 7.5, and 3 times with
buffer, pH 7. The resin-associated proteins were electrophoresed, transferred
to polyvinylidene difluoride membrane, and probed for TLR5 using an anti-HA
antibody. b, TLR5-FLAG-containing detergent lysates from COS-1 cells
were incubated in the absence (lane 1) or presence of flagellin at
8.5 x 1010 M (lane 2),
1.7 x 109 M (lane 3),
3.4 x 109 M (lane 4),
6.8 x 109 M (lane 5),
or 1.4 x 108 M (lane 6)
and Talon resin. c, TLR5-FLAG-containing detergent lysates from COS-1
cells were incubated in the absence (lane 1) or presence of S.
enteritidis flagellin (lane 2), S. typhimurium FliC
(lane 3), S. typhimurium FljB (lane 4), E.
coli flagellin (lane 5), or S. enteritidis flagellin
mutant 229 (lane 6) and Talon resin. d, TLR5-FLAG-expressing
COS-1 cells were incubated with (lane 2) or without (lane 1)
4.8 x 108 M flagellin at 4
°C for 30 min, washed to remove unbound flagellin, and then lysed. The
lysates were incubated with Talon resin and the resin-associated TLR5-FLAG was
assessed by Western blotting.
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Flagellin Binds to the Extracellular Domain of TLR5Having
established the ability of flagellin to bind to TLR5 in cell lysates, we next
determined if flagellin bound to TLR5 was expressed on the surface of cells.
Transfected COS-1 cells were incubated in the presence or absence of 4.8
x 108 M flagellin for 30 min on
ice and then washed to remove unbound flagellin. Detergent lysates were then
prepared and incubated with the Talon metal affinity resin. As shown in
Fig. 1d, flagellin
bound to TLR5 expressed on the surface of cells, a finding that is consistent
with an interaction involving the extracellular domain of TLR5.
Flagellin Binds to a Soluble Form of the Extracellular Domain of
TLR5As a first step in defining a binding site for flagellin, we
evaluated the ability of flagellin to bind to a soluble form of the
extracellular domain of TLR5. A cDNA encoding the first 636 amino acids of
TLR5 was generated and inserted into the p3XFLAG-CMV-14 expression vector. The
expressed protein contains a signal sequence, the extracellular domain of
TLR5, and a FLAG tag at the COOH terminus. We have termed the expressed
protein, TLR5-ED-(1636). As shown in
Fig. 2a, COS-1 cells
not only expressed TLR5-ED-(1636), but secreted the protein as well
(lane 4). Because the cell-associated and secreted forms of the
protein exhibit the same apparent molecular mass in SDS gels, we assume that
the signal peptide of the cell-associated form is fully processed and the
protein was in transit through the secretory pathway. Incubation of
TLR5-ED-(1636)-containing lysates with flagellin and the Talon resin
resulted in the association of the protein with the resin
(Fig. 2a, lane
2). Association was not observed in the absence of flagellin (lane
1) or in the presence of the 229 flagellin mutant (lane 3).
These results not only confirm the ability of flagellin to bind to the
extracellular domain of TLR5, but demonstrate a relationship between binding
to TLR5 and biological activity
(24,
30).

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FIG. 2. Binding of flagellin to the extracellular domain of TLR5.
a, COS-1 cells were transiently transfected with an expression
plasmid encoding TLR5-ED-(1636). The culture medium (lane 4)
and cellular detergent lysates (lanes 13) were analyzed 48 h
later. The culture medium was concentrated 5-fold and the presence of
TLR5-ED-(1636) was assessed by Western blotting following
immunoprecipitation of the protein. Binding of flagellin to cell-associated
TLR5-ED-FLAG was evaluated (lanes 13). Lane 1, no
flagellin; lane 2, flagellin; lane 3, flagellin mutant 229.
b, lysates from COS-1 cells transiently transfected with expression
plasmids encoding TLR5-ED-(1636), -(1478), -(1425),
-(1372), -(1319), or -(1159) were analyzed for flagellin
binding. The arrows mark the positions of the expressed proteins.
Western blot analysis revealed that all of the proteins were expressed at
comparable levels. c, lysates from COS-1 cells transiently
transfected with expression plasmids encoding TLR5-ED-(1425),
-(1407), -(1386), and -(1372) were analyzed for flagellin
binding (left side). The level of each TLR5-ED in the lysates was
also determined (right side). d, detergent lysates from
COS-1 cells containing TLR5-ED-(1425) or TLR5-ED-(386636) were
incubated with flagellin and Talon resin and binding was assessed by Western
blotting.
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Determination of the Minimal Form of TLR5-ED Required for Flagellin
BindingHaving established the ability of TLR5-ED-(1636) to
bind to flagellin, we initiated experiments to determine the region of the
TLR5 extracellular domain that was required for binding. TLR5-ED-(1478)
and TLR5-ED-(1425), like TLR5-ED-(1636), bound to flagellin
(Fig. 2b).
TLR5-ED-(1425) reproducibly exhibited greater binding activity than the
full-length extracellular domain. In contrast, TLR5-ED-(1372),
TLR5-ED-(1319), and TLR5-ED-(1159) did not bind to flagellin. It
is important to emphasize that all of the proteins were expressed at
comparable levels (data not shown). To more precisely determine the minimal
polypeptide that retains flagellin binding, we generated a series of
truncations between residue 425 and 372 and tested them in the flagellin
binding assay. TLR5-ED-(1407) retained binding activity, but
TLR5-ED-(1386) did not possess detectable activity
(Fig. 2c). The
activity of the TLR5-ED-(1407) was reduced relative to the
TLR5-ED-(1425) (Fig.
2c), but was similar to the activity of the full-length
extracellular domain, TLR5-ED-(1636)
(Fig. 2b). Based on
these results, we hypothesized that the region between amino acid residues 386
and 407 is involved in the binding of flagellin, either by serving as a
binding site or by facilitating the folding of the polypeptide in the proper
form for flagellin binding.
Having established the importance of the region between residues 386 and
407 of TLR-ED in truncations containing the NH2 terminus of the
TLR5 extracellular domain, we tested the converse construct from amino acids
386 to the COOH terminus of the extracellular domain (TLR5-ED-(386636).
As shown in Fig. 2d,
TLR5-ED-(386636), like TLR5-ED-(1407), possesses the ability to
bind flagellin. The fact that the same sequence (386407) confers
binding activity to the NH2 and COOH terminus regions of the
extracellular domain of TLR5 supports the idea that the 386407 region
functions as a binding site for flagellin rather than conferring the proper
conformation for flagellin binding at some other site. This conclusion is
strengthened by the observations that residues 408636 are not required
for flagellin binding by the NH2 terminus TLR5-ED and that residues
1385 are not required for flagellin binding by the COOH terminus
TLR5-ED (Fig. 2).
Sedimentation Velocity Centrifugation of TLR5-EDWe have
found that full-length TLR5 self-associates
(41). We analyzed the
sedimentation velocity of TLR5-ED-(1636) and TLR5-ED-(1425) to
determine whether these TLR5 extracellular domain forms self-associate or
associate with other proteins in the COS-1 cell lysates. We prepared COS-1
cell lysates containing either TLR5-ED-(1636) or TLR5-ED-(1425)
and used rate zonal centrifugation to determine the sedimentation coefficients
for each polypeptide by comparison with standards of known
s20,w. As shown in
Fig. 3, both polypeptides
exhibited experimental s20,w values
that were consistent with monomeric forms (6.4 S for TLR5-ED-(1636) and
4.9 S for TLR5-ED-(1425)). Thus it is unlikely that the difference
between the two polypeptides in terms of flagellin binding is because of
differences in their state of self-association. In addition, because the
s20,w values are consistent with the
presence of monomers, these results support the conclusion that flagellin
binds directly to monomeric forms of TLR5-ED and not to an associated protein.
However, it is possible that TLR5-ED complexes might form, but are unstable
under conditions used in these experiments or that a small subset of complexes
containing multimers of TLR-ED and possibly one or more other proteins are
responsible for the observed binding of flagellin.

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FIG. 3. Sedimentation velocity centrifugation of TLR5-ED-(1636) and
TLR5-(1425). COS-1 cell lysates containing TLR5-ED-(1636) or
TLR5-(1425) were layered over a 5-ml 520% sucrose gradient. The
samples were centrifuged at 50,000 rpm for 5 h (20 °C) in a SW55 rotor.
Ten fractions were collected and analyzed by Western blot for the presence of
the TLR5. The arrows indicate the predicted position of monomeric and
dimeric forms of each polypeptide.
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The TLR5-ED Region Encompassing Amino Acids 1386 Is Required for
SignalingBecause the region encompassing amino acids 386407
is involved in flagellin binding, we considered the possibility that a TLR5
beginning at residue 386 and including transmembrane and cytoplasmic domains
might be sufficient for flagellin signaling. Therefore, we prepared cDNAs
encoding residues 386857 and tested its ability to signal in RAW 264.7
cells, a cell line lacking endogenous TLR5, but responds to flagellin when
transiently transfected with a TLR5 expression plasmid
(41). Inducible nitric-oxide
synthase promoter-dependent luciferase expression was used as a measure of
flagellin signaling in the transiently transfected RAW 264.7 cells. Even
though the truncated TLR5 contains a flagellin binding site, it did not
transmit a signal in the RAW 264.7 cells
(Table I).
Because the truncated TLR5 did not signal, we considered the possibility
that the lack of activity was because of a diminished ability of the mutant to
self-associate. To evaluate this possibility, COS-1 cells were transiently
co-transfected with TLR5-HA and TLR5-FLAG or the truncated form of TLR5-FLAG
containing amino acid residues 386857, and the presence of multimers
was assessed following immunoprecipitation with anti-FLAG antibody and Western
blotting. As shown in Fig. 4,
the full-length form of TLR5-FLAG associates with TLR5-HA. The truncated form
of TLR5-FLAG did not appear to be markedly different from full-length TLR5 in
its ability to associate with full-length TLR5. Combined with the results
presented in Fig. 3, we
conclude that the self-association of TLR5 requires the COOH terminus
including the transmembrane domain, but signaling also requires regions within
the first 385 NH2-terminal amino acids.

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FIG. 4. Association of TLR5-(386857) with full-length TLR5. COS-1
cells were co-transfected with expression plasmids encoding full-length
TLR5-HA and TLR5-FLAG (lane 1) or TLR5-(386857)-FLAG (lane
2). The complexes were immunoprecipitated with an anti-FLAG antibody and
analyzed by Western blot for TLR5-HA and subsequently for the FLAG
epitope.
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DISCUSSION
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Using a COS-1 cell expression system for producing various forms of TLR5,
we have shown that flagellin binds in a highly specific manner to the
extracellular domain of TLR5. The relationship between the specificity of
binding and bioactivity is evidenced by the inability of a biologically
inactive form of flagellin to bind TLR5. Using truncated forms of the TLR5
extracellular domain, we have mapped a region (residues 386407) that is
critical for flagellin binding. Although it is formally possible that the
requirement for this region is because of its role in the folding of the
extracellular domain of TLR5, we favor the hypothesis that this region
contains the binding site for flagellin. The ability of TLR5-ED-(1407)
and TLR5-ED-(386636) to bind flagellin represents the strongest
evidence for this conclusion (Fig.
2d). The observation that TLR5-ED-(1425) binds
flagellin better than TLR5-ED-(1636) or -(1407) indicates that
the region encompassing residues 408425 plays an accessory role in
flagellin binding. It is possible that this region promotes the proper folding
of the 386407 domain or alternatively contributes directly to the
quality of the overall binding to flagellin.
Because the TLR5-ED exists as a monomer, it is quite likely that flagellin
binds directly to TLR5 and does not require a co-receptor. The observed
concentration dependence for flagellin binding is consistent with this
conclusion. Although the presence of amino acids 386407 permits binding
to flagellin, signaling is clearly dependent on one or more regions between
residues 28 and 386. The absence of this region is associated with a loss of
signaling ability (Table I).
Because the ability of the truncated TLR5 to oligomerize is not dramatically
reduced, we hypothesize that the NH2-terminal domain of the protein
plays a role in signaling subsequent to the binding of flagellin. Although our
results support the conclusion that flagellin has a high affinity for TLR5,
additional studies are clearly required to determine the affinity constant for
binding. Our efforts to achieve this goal have been hampered by problems
associated with conventional whole cell binding assays and large scale
production of TLR5 for in vitro binding assays. In preliminary
studies, we observed that flagellin non-specifically interacts with lipid
bilayers making it very difficult to assess specific binding to
cell-associated TLR5. Furthermore, yeast and bacterial protein expression
systems have not been productive sources of full-length TLR5 or its
extracellular domain. This contrasts with our ability to obtain expression of
the intracellular domain of TLR5.2 Nonetheless, we believe that the
results presented in this study represent a major step forward in our
understanding of the interaction of flagellin with TLR5 as well as the
selectivity of TLR5 for flagellin.
Analysis of the 386407 region of TLR5 revealed that this sequence
matches the consensus sequence for a leucine-rich repeat (LRR)
(Fig. 5)
(31). The known LRR-containing
proteins share two fundamental properties, namely, the presence of repetitive
LRR sequences and involvement in protein-protein interactions
(31). These LRRs consist of a
short -strand and an -helix that are parallel to each other and
separated by a loop. Although TLRs possess LRRs, the specific function(s) of
this motif has not previously been established. On the basis of our findings,
we propose that the role of this LRR in TLR5 is to serve as a specific binding
site for flagellin.

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FIG. 5. Comparison of the consensus sequence for a LRR and the flagellin binding
region in TLR5. X, any residue; +, aliphatic amino acid.
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Our findings regarding the structural features of TLR5 required for
flagellin binding may provide important clues as to the nature of the
interaction of these two proteins. The results of two recent studies
(22,
23) indicate that the
conserved amino and carboxyl regions of flagellin are required for biologic
activity. This appears to be in conflict with our observation
(24) that a peptide containing
only these two regions was inactive. However, as noted by Eaves-Pyles et
al. (23), such a peptide
may not function because it lacks a bridge that facilitates the necessary
interaction between the two ends of the flagellin protein. The involvement of
the highly conserved termini of flagellin in TLR5 binding is consistent with
the notion that a key feature of pathogen-associated molecular patterns is
their invariance between microorganisms of a given class
(32). The NH2- and
COOH-terminal regions of flagellin possess heptad repeats of hydrophobic amino
acid residues (33). It is
possible that these sequences play a critical role in the interaction of
flagellin and TLR5. For example, Marino et al.
(34) have suggested that
hydrophobic sequences within a LRR in InIB, a protein involved in Listeria
monocytogenes invasion of phagocytes, may play an important role in the
interaction of this protein with its cellular receptor.
In the monomeric form, the amino- and carboxyl-terminal regions of
flagellin exist in a relatively disordered form
(35,
36). However, upon
polymerization, the termini become -helical and forms an interlocking
pattern of coiled-coil bundles
(37,
38) within the central core of
the flagellum (39). The
flagellin that is constitutively released by Gram-negative bacteria exists as
predominantly dimers and trimers
(40). This is also the case
with the purified, recombinant flagellin used in our studies. Thus it is
likely that the amino and carboxyl termini of biologically active soluble
flagellin have assumed the formation associated with the polymerized form of
the protein.
Although TLR5-ED-(1636) and -(1425) exist predominantly as
monomers (Fig. 3), full-length
TLR5 forms multimers (Fig. 4 and Ref. 41). Because
flagellin exists in large part as dimers and trimers
(40), it is possible that a
single flagellin multimer may bind to more than one TLR5 oligomer. The ability
to cross-link TLR5 complexes may provide an additional mechanism for the
extraordinary potency of flagellin.
In view of our findings, we hypothesize that specific LRRs in other TLRs
function as binding sites for specific ligands. If subsequent studies support
this notion, then it should be possible to develop a family of antagonists
that block TLR agonists. Such molecules might be of substantial benefit in the
prevention of septic shock. In addition, it should be possible to develop
small molecules that recognize the LRR binding motif in specific TLRs and
trigger TLR signaling. Such agonists would be of great benefit in those
instances in which enhanced innate immunity is needed, as for example, in
promoting anti-microbial immunity or increasing the efficacy of
vaccination.
 |
FOOTNOTES
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|---|
* This work was supported by National Institutes of Health Grants AI38670 and
AI51319. The costs of publication of this article were defrayed in part by the
payment of page charges. This article must therefore be hereby marked
"advertisement" in accordance with 18 U.S.C. Section 1734
solely to indicate this fact. 
To whom correspondence should be addressed. E-mail:
smizel{at}wfubmc.edu.
1 The abbreviations used are: LPS, lipopolysaccharide; TLR, toll-like
receptor; TLR5-ED, TLR5-extracellular domain; LRR, leucine-rich repeat; HA,
hemagglutinin. 
2 J. Sun and S. B. Mizel, unpublished observations. 
 |
ACKNOWLEDGMENTS
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We thank Pameeka S. Smith for outstanding technical assistance.
 |
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