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J. Biol. Chem., Vol. 278, Issue 46, 45049-45055, November 14, 2003
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From the Department of Biomembrane and Biofunctional Chemistry, Graduate School of Pharmaceutical Sciences, Hokkaido University, Kita 12-jo, Nishi 6-choume, Kita-ku, Sapporo 060-0812, Japan
Received for publication, May 27, 2003 , and in revised form, August 14, 2003.
| ABSTRACT |
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csg1 cells exhibited only a reduction in the synthesis of mannosylated sphingolipids compared with wild-type cells, whereas the
csg1
csh1 double deletion mutant exhibited a total loss. These results indicated that Csg1p and Csh1p have redundant functions in MIPC synthesis. Analyses using
csg1 and
csh1 cells in the
ipt1,
sur2, or
scs7 genetic background demonstrated that Csh1p has a different substrate specificity from Csg1p. We also revealed that Csg2p interacts with both Csg1p and Csh1p. Deletion of the CSG2 gene reduced the Csg1p activity and abolished the Csh1p activity. These results suggested that two distinct inositol phosphorylceramide mannosyltransferase complexes, Csg1p-Csg2p and Csh1p-Csg2p, exist. | INTRODUCTION |
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-1,6-mannosyltranferases, Och1p and Hoc1p (3). Structurally, Csg2p is an integral membrane protein with up to 10 transmembrane segments that, when overexpressed, localizes to the endoplasmic reticulum (8, 10). Csg2p is also known to have an EF-Ca2+-binding domain and has been implicated in the regulation of a nonexchangeable, intracellular Ca2+ pool (11).
The predicted product of the open reading frame YBR161w (termed here CSH1 for CSG1/SUR1 homolog) is highly homologous to Csg1p. In this study we examined the possibility that this open reading frame is actually involved in the MIPC synthesis. The MIPC synthesis activity exhibited by a
csg1 mutant was found to be completely lacking in a
csg1
csh1 double mutant, indicating that both Csg1p and Csh1p are involved in the MIPC synthesis, redundantly. Moreover, we found that Csg2p associates with both Csg1p and Csh1p. Thus, Csg1p-Csg2p and Csh1p-Csg2p complexes may function as two distinct IPC mannosyltransferases.
| EXPERIMENTAL PROCEDURES |
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csg1::HIS3 and
csg2::URA3 cells were constructed by replacing the 0.44-kb ClaI-EcoRI region in the CSG1 gene and the 0.41-kb EcoRI-HincII region in the CSG2 gene with HIS3 and URA3 markers, respectively. The
csh1::LEU2 and
csh1::KanMX4 cells were constructed by replacing the 0.59-kb EcoRV-XbaI region in the CSH1 gene and the entire open reading frame of the CSH1 gene with the LEU2 marker and the KanMX4 marker, respectively. The
ipt1::KanMX4,
sur2::KanMX4,
scs7::KanMX4, and
pep4::KanMX4 cells were constructed by replacing their entire open reading frames with the KanMX4 marker. The cells were grown either in YPD medium (1% yeast extract, 2% peptone, and 2% glucose) or in synthetic complete medium (0.67% yeast nitrogen base and 2% glucose) containing nutritional supplements.
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For construction of pSU30 (CSG1-HIS6-MYC, HIS3 marker, 2 µ), the CSG1 region was amplified using genomic DNA prepared from SEY6210 and the primers 5'-GCTGCGTCTCTTCTCTTGCTCC-3' and 5'-CTCACTGGGAAATAACAGCTCGGACC-3'. The resulting fragments were cloned into pGEM-T Easy (Promega) to generate the pSU17 plasmid. The 1.6-kb SmaI-BamHI fragment of pSU17 was then cloned into the EcoRV-BamHI site of pSU29 to generate pSU30. To construct the CSG23xHA fusion gene, the CSG2 region was first amplified from genomic DNA prepared from SEY6210 using the primers 5'-AACTCGAGTATACTTTTCTACGCCTCC-3' and 5'-CGGGGAAGGTAAATACCACCATACTAGT-3'. The resulting fragments were cloned into pGEM-T Easy to generate the pSU2, and the 1.7-kb XhoI-SpeI fragment of pSU2 was then cloned into the XhoI-SpeI site of pKHR45, generating pSU6 (CSG23xHA, HIS3 marker, CEN). The pSU8 (CSG23xHA, LEU2 marker, 2 µ) was constructed by cloning the 1.8-kb XhoI-SacI fragment of pSU6 into the XhoI-SacI site of pRS425 (13).
The pSU41 (CSH1-HIS6-MYC, HIS3, 2 µ) was constructed using the CSH1 region amplified from genomic DNA prepared from SEY6210 and the primers 5'-CATTATGATGGTAACTCCATCAG-3' and 5'-CGCAAAATTTACCGACTTAACGGATCCA-3'. The resulting fragments were cloned into pGEM-T Easy to generate the pSU34, and the 1.7-kb NotI-BamHI fragment of pSU34 was then cloned into the EcoRV-BamHI site of pSU29, producing pSU41(CSH1-HIS6-MYC, HIS3, 2 µ).
[3H]DHS Labeling AssayYeast strains were grown in YPD medium at 30 °C to 1.0 A600 unit. The cells were treated with [4,5-3H]DHS (50 Ci/mmol; American Radiolabeled Chemical, Inc.), which had been complexed with 1 mg/ml fatty acid-free bovine serum albumin (Sigma; A-6003) and incubated for 1 h or 3 h at 30 °C. 1 µCi of [3H]DHS was used for labeling 1.0 A600 cells. The cells were then washed with cold YPD medium containing 1 mg/ml bovine serum albumin, and lipids were extracted as described previously (14). The cells were suspended in 100 µl of ethanol, water, diethylether, pyridine, 15 N ammonia (15/15/5/1/0.018, v/v/v/v/v) and incubated at 60 °C for 15 min. After centrifugation at 1,500 x g for 5 min at 4 °C, the resulting supernatant was transferred to fresh tubes, dried, and suspended in 20 µl of chloroform, methanol, water (5/4/1, v/v/v). Lipids of equal radioactivity were resolved by TLC on Silica Gel 60 high performance TLC plates (Merck) with chloroform, methanol, 4.2 N ammonia (9/7/2, v/v/v) or chloroform, methanol, acetic acid, water (16/6/4/1.6, v/v/v/v) (1) as the solvent system.
ImmunoblottingCell lysates for immunoblotting were prepared as described previously (13). Lysates equivalent to 0.2 A600 cells were subject to SDS-PAGE and transferred to ImmobilonTM polyvinylidene difluoride membrane (Millipore). The resulting membrane was incubated with a 1:1000 dilution of the anti-HA antibody HA7 (Sigma) or the anti-Myc antibody PL14 (Medical & Biological Laboratories) for 1 h and then with a 1:5000 dilution of horseradish peroxidase-conjugated donkey anti-mouse IgG F(ab')2 fragment (Amersham Biosciences) for 1 h. Labeling was detected by the ECL detection method (Amersham Biosciences).
Pull-down Assay Using a Ni-NTA ColumnYeast spheroplasts were lysed by sonication in buffer A (50 mM Hepes-NaOH, pH 7.5, 150 mM NaCl, 10 mM imidazole, 1 mM phenylmethylsulfonyl fluoride, 10 mM 2-mercaptoethanol, and a protease inhibitor mixture (CompleteTM, EDTA-free; Roche Applied Science)). After removal of cell debris by centrifugation at 1,500 x g for 3 min at 4 °C, the supernatant was treated with four volumes of buffer B (50 mM Hepes-NaOH, pH 7.5, 1% Triton X-100, 150 mM NaCl, 10 mM imidazole, 10 mM 2-mercaptoethanol) for 1 h at 4 °C to solubilize membranes. The samples were centrifuged at 100,000 x g for 30 min, and the supernatant was applied to a Ni-NTA-agarose column (1 ml) equilibrated with buffer B. The column was washed with 10 ml of buffer B, and bound proteins were eluted with 2 ml of buffer C (50 mM Hepes-NaOH, pH 7.5, 1% Triton X-100, 150 mM NaCl, 250 mM imidazole, 10 mM 2-mercaptoethanol).
| RESULTS |
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csg1 and
csh1 mutants, as well as a
csg1
csh1 double mutant, and compared these with wild-type cells for their ability to synthesize sphingolipids. The cells were cultured in YPD medium containing [3H]DHS for 1 h (Fig. 3, top panel) or 3 h (Fig. 3, bottom panel), and then lipids were extracted and separated by TLC. In wild-type cells labeled for 1 h, IPC, MIPC, and M(IP)2C, each with several hydroxylation states, were detected. Among these IPC-C was the most prominent, followed by IPC-A, M(IP)2C-A, M(IP)2C-B/B', and M(IP)2C-C. In the 3-h labeling experiment, the amounts of M(IP)2C-C and MIPC-C had increased, whereas the amounts of IPC-A and MIPC-B/B' had decreased. In both labeling experiments, MIPC was found in much lower quantities than IPC or M(IP)2C. Thus, the MIPC-to-M(IP)2C conversion appears to be rapid.
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csg1 mutant, MIPC-C was not detected at either time period. Moreover, the amount of M(IP)2C-C was greatly reduced compared with that in wild-type cells (10 and 30% for 1- and 3-h labeling, respectively). Concomitantly, however, slightly higher amounts of the IPC species were observed, especially in the 3-h labeling.
On the other hand, the lipid composition of the
csh1 mutant was quite similar to that of the wild-type cells (Fig. 3, lane 3). In the
csg1
csh1 double mutant, however, both MIPC and M(IP)2C were completely absent, and the levels of all IPC species were increased compared with those in the wild-type cells (Fig. 3, lane 4). MIPC and M(IP)2C were not detected in the
csg1
csh1 double mutant, even after labeling for 24 h (data not shown). The effects of deleting the CSG1 and CSH1 genes on the sphingolipid synthesis pattern were not restricted to the yeast background used (KA31-1A). Similar data were obtained using another yeast background (BY4741) (data not shown). Taken together, these results indicate that both Csg1p and Csh1p have functions, albeit redundant, in MIPC synthesis.
Csg1p and Csh1p Exhibit Different Substrate SpecificitiesAs shown in Fig. 3, the [3H]DHS-labeled pattern of
csg1 cells differed from that of
csh1 cells. The most prominent differences were a reduction in M(IP)2C-C and a loss of MIPC-C in the
csg1 cells. These results implied that Csg1p and Csh1p might exhibit different substrate specificities. To examine this possibility, we constructed
csg1 and
csh1 mutants in a
ipt1,
sur2, or
scs7 background and then performed the [3H]DHS labeling experiments.
We first investigated sphingolipid synthesis in the mutant of IPT1. Because Ipt1p is involved in converting MIPC to M(IP)2C, M(IP)2C is not synthesized in the
ipt1 cells. Sphingolipid synthesis in the
csh1 cells in the
ipt1 background was quite similar to that in the control CSH1+ cells (Fig. 4A, lanes 1 and 3). On the other hand, the
csg1 mutation caused a reduction in MIPC-C to 20% of that in the CSG1+ cells, with a concomitant increase in IPC-C (Fig. 4A, lanes 1 and 2). MIPC-A and MIPC-B/B' levels observed in the
csg1 mutant resembled those of the wild-type cells. The amounts IPC-D and MIPC-A also did not differ, although they were not separated by the original solvent system used (Fig. 4A, lanes 13). Another solvent system, in which the two separate, confirmed that the amounts of both lipids were unchanged by the
csg1 mutation (Fig. 4A, lanes 4 and 5).
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sur2 and
scs7 mutations. We first investigated sphingolipid synthesis in the
sur2 background, in which only the A and B' species are synthesized. The amounts of IPC, MIPC, and M(IP)2C in the
csg1
sur2 double mutant were quite similar to those in the control
sur2 mutant (Fig. 4B, lanes 1 and 2). The labeling pattern in the
csh1
sur2 cells was nearly the same as that in the control CSH1+ cells, although a slight decrease in the amount of MIPC-B' was observed in the
csh1
sur2 cells.
We next investigated the substrate preferences of Csg1p and Csh1p using the
scs7 background, in which only the A and B species are synthesized. Sphingolipid synthesis in the
csh1
scs7 double mutant was quite similar to that in the CSH1+
scs7 mutant (Fig. 4C, lanes 1 and 3). On the other hand, the
csg1 mutation caused a reduction in M(IP)2C-B to 10% of that in the CSG1+ cells (Fig. 4C, lanes 1 and 2). Taken together, these results lead to the conclusion that Csh1p exhibits a similar activity to Csg1p against IPC-A and IPC-B' but a weaker activity against IPC-B and IPC-C than Csg1p.
Csg2p Interacts with Both Csg1p and Csh1pIt has been reported that Csg2p is involved in MIPC synthesis (3, 6). Therefore, we hypothesized that Csg2p may function together with Csg1p and Csh1p by forming complexes with them. To examine this hypothesis, we performed a pull-down assay using a Ni-NTA column. We constructed a pSU30 plasmid encoding Csg1p-His6-Myc, a pSU41 plasmid encoding Csh1p-His6-Myc, and a pSU8 plasmid encoding Csg2p-3xHA. Expression of these tagged proteins in transfected KHY195 cells was confirmed by immunoblotting using anti-Myc or anti-HA antibodies. Csg1p-His6-Myc was detected as a band of 46 kDa (the predicted molecular mass is 48 kDa) (Fig. 5A, lane 2). Csh1p-His6-Myc was detected as several bands of 75, 60, and 47 kDa, and bands with lower molecular masses (Fig. 5A, lane 4). Of these bands, the 47-kDa band was most likely to be the intact Csh1p-His6-Myc (predicted molecular mass is 48 kDa). It is possible that the 75- and 60-kDa forms are modified by glycosylation because Csh1p contains potential N-glycosylation sites (Fig. 2, dots). The bands with lower molecular masses may be degradation products. Csg2p-3xHA was detected as a weak band of 47 kDa (the predicted molecular mass is 49 kDa) (Fig. 5A, lane 6); several bands with faster gel mobilities, including a prominent band of 24 kDa, were also detected. These bands may be generated by degradation caused by nonphysiological overproduction.
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Next, to determine the interaction between Csh1p and Csg2p, cell lysates prepared from KHY195 cells bearing pSU8 (CSG23xHA) and either pRS423 (vector) or pSU41(CSH1-HIS6-MYC) were subjected to the pull-down assay using the Ni-NTA column. Similar to the results obtained with Csg1p-His6-Myc, Csg2p-3xHA was also co-eluted with Csh1p-His6-Myc (Fig. 5C). Once again, the putative degraded Csg2p-3xHA was also co-eluted with Csh1p-His6-Myc (Fig. 5C, asterisk). These results indicate that two complexes, Csg1p-Csg2p and Csh1p-Csg2p, exist.
Determination of the Role of Csg2p in MIPC Synthesis Next, we examined the effect of the
csg2 mutation on the synthesis of MIPC. We constructed
csg2,
csg1
csg2,
csh1
csg2, and
csg1
csg2
csh1 cells. A [3H]DHS labeling experiment using the
csg2 cells demonstrated that deletion of the CSG2 gene results in a drastic decrease in the amounts of MIPC and M(IP)2C and an increase in the amount of IPC (Fig. 6A, lane 2). Only M(IP)2C-B'/B, and M(IP)2C-C were detected, barely (Fig. 6A, lane 2). This effect of the
csg2 mutation was much greater than that observed in the
csg1 or the
csh1 cells (Fig. 3). Thus, Csg2p has important functions for both complexes (Csg1p-Csg2p and Csh1p-Csg2p) in eliciting their enzyme activities. Next, to examine whether Csg1p or Csh1p is responsible for the residual activity observed in the
csg2 cells, we examined the labeling patterns of the
csh1
csg2 and
csg1
csg2 cells. The labeling pattern of the
csh1
csg2 double mutant was identical to that of the
csg2 mutant (Fig. 6A, lane 3). In contrast, the small amounts of M(IP)2C-B'/B and MIPC-C observed in the
csg2 cells were completely lacking after the introduction of the
csg1 mutation (Fig. 6A, lane 4). These results indicate that, compared with Csg2p-associated Csg1p, the MIPC synthesis activity of free Csg1p is significantly lower, but free Csg1p does retain detectable MIPC-B'/B and MIPC-C synthesis activity. On the other hand, free Csh1p could not produce MIPC at all. Thus, Csg2p is essential for the MIPC synthesis activity of the Csh1p-Csg2p complex and is also quite important for that of the Csg1p-Csg2p complex.
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csh1 mutation on Ca2+ sensitivity. The cells were grown on a YPD plate containing 100 mM Ca2+ at 30 °C. As shown in Fig. 6B, the
csg1 and
csh1 mutants were resistant to exogenous Ca2+ and exhibited normal growth. On the other hand, the
csg2 mutant, as well as the
csg1
csh1 double mutant, was highly sensitive to Ca2+ and would not grow on the medium. Identical results were obtained when the cells were grown at 37 °C (data not shown). Thus, the Ca2+ sensitivities of these mutants correlate well with their MIPC synthesis activities. | DISCUSSION |
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The exact catalytic subunit of MIPC synthesis (Csg1p and Csh1p, Csg2p, or other) has not been verified. Nevertheless, we propose a model that Csg1p and Csh1p are catalytic subunits with Csg2p as a regulatory subunit, based on several supportive results. First, Csg1p and Csh1p contain stretches of 93 amino acids with homology to those found in two yeast
-1,6-mannosyltranferases, Och1p and Hoc1p (3), but Csg2p does not share this sequence. Second, previous studies have shown that although overexpression of Csg1p suppresses the Ca2+-sensitive phenotype of a csg2 mutant, in the inverse experiment, overexpression of Csg2p did not suppress the Ca2+ sensitivity of a csg1 mutant (3). Thus, the role of Csg2p appears more regulatory rather than directly enzymatic. Finally, M(IP)2C was detected, albeit weakly, in the
csh1
csg2 cells, suggesting that, in the absence of Csg2p, Csg1p could produce MIPC.
The growth of the
csg1 mutant on a YPD plate containing Ca2+ was as normal as that of the wild-type cells at both 30 and 37 °C (Fig. 6B and data not shown). In contrast, the
csg2 cells and the
csg1
csh1 double mutant cells, both of which exhibited more severe defects in MIPC synthesis, were highly sensitive to exogenous Ca2+. The Ca2+ resistance of the
csg1 cells in this study is not consistent with a previous report (3) that the
csg1 mutant exhibits a Ca2+-sensitive phenotype at 37 °C but not at 26 °C (3). It is possible that the contribution of Csg1p to the total MIPC synthesis activity differs among different yeast backgrounds. Indeed, the
csg1 cells used in the previous report, on a DBY685 background, exhibited a severe defect in MIPC synthesis (3).
Several lines of evidence suggest that the Ca2+ sensitivity is caused by an accumulation of IPC-C, which contains a phytosphingosine-type long chain base and a hydroxylated very long chain fatty acid at the C2 position. The Ca2+-sensitive phenotype of the csg2 mutant was suppressed by several mutations that caused a reduction in the IPC-C concentrations (6). These mutations included genes involved in long chain base synthesis (lcb1, lcb2, tsc3, and tsc10) (6, 9, 15), palmitoyl-CoA synthesis (fas2) (9), elongation of very long chain fatty acids (tsc13) (9, 16), conversion of DHS to phytosphingosine (sur2) (1), and hydroxylation of very long chain fatty acids (scs7) (1). Moreover, overproduction of Ccc2p, which may stimulate the conversion of IPC-C to IPC-D, also rescued the Ca2+-sensitive phenotype of the csg2 mutant (3). However, the reason the accumulation of IPC-C causes Ca2+ sensitivity remains unclear. One possibility is that IPC-C itself acts as a signaling molecule. Recent studies have indicated that several sphingolipid metabolites and intermediates function as signaling molecules. In yeast, sphingoid long chain base is involved in endocytosis (17) and in cell cycle arrest at G0/G1 (18), and sphingoid long chain base 1-phosphate has been implicated in heat stress resistance, diauxic shift, and Ca2+ mobilization (1923). Moreover, accumulation of ceramide inhibits growth (24, 25). Thus, it is possible that IPC-C is another potent signaling molecule involved in the Ca2+ signaling pathway. Other suppressors of Ca2+ sensitivity in the csg2 mutant were found to be genes involved in signal transduction. These included genes encoding the protein kinase TOR2 and the phosphatidylinositol-4-phosphate 5-kinase MSS4 (9). Tor2p functions in a nutrient-sensing signaling cascade and in cell cycle-dependent reorganization of actin cytoskeleton (2630). Mss4p is also known to be involved in the organization of actin cytoskeleton (31, 32). Thus, IPC-C might connect the increase of Ca2+ in the cells and the signaling pathways of Tor2p and Mss4p.
Another possibility is that IPC-C regulates Ca2+ signaling by modulating the formation of microdomains. Recent theory suggests the existence of microscopic regions called microdomains (or lipid rafts) in the plasma membrane, which function as platforms for effective signal transduction (33). In yeast, the microdomain is composed of ergosterol and sphingolipids (34). It has been reported that several proteins such as Pma1p, Gas1p, and Nce2p associate with the microdomain (34). Consistent with this model, Ca2+ changes the sphingolipid composition by stimulating the conversion of IPC to MIPC.2 Because Csg2p contains an EF-Ca2+-binding domain (8, 10), we propose that Csg1p or Csh1p activity may be regulated by Ca2+ through Csg2p.
| FOOTNOTES |
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To whom correspondence should be addressed. Tel.: 81-11-706-3970; Fax: 81-11-706-4986; E-mail: yigarash{at}pharm.hokudai.ac.jp.
1 The abbreviations used are: IPC, inositol phosphorylceramide; MIPC, mannosylinositol phosphorylceramide; M(IP)2C, mannosyldiinositol phosphorylceramide; DHS, dihydrosphingosine; HA, hemagglutinin; 3xHA, triple HA; Ni-NTA, nickel-nitrilotriacetic acid. ![]()
2 S. Uemura, A. Kihara, J. Inokuchi, and Y. Igarashi, unpublished results. ![]()
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