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J. Biol. Chem., Vol. 278, Issue 46, 46052-46063, November 14, 2003
Functional Importance of Polar and Charged Amino Acid Residues in Transmembrane Helix 14 of Multidrug Resistance Protein 1 (MRP1/ABCC1)IDENTIFICATION OF AN ASPARTATE RESIDUE CRITICAL FOR CONVERSION FROM A HIGH TO LOW AFFINITY SUBSTRATE BINDING STATE*![]() ![]() ¶ || ¶** ¶![]() ![]() ![]() ![]()
From the
Received for publication, July 31, 2003 , and in revised form, September 3, 2003.
Human multidrug resistance protein 1 (MRP1) confers resistance to many chemotherapeutic agents and transports diverse conjugated organic anions. We previously demonstrated that Glu1089 in transmembrane (TM) 14 is critical for the protein to confer anthracycline resistance. We have now assessed the functional importance of all polar and charged amino acids in this TM helix. Asn1100, Ser1097, and Lys1092, which are all predicted to be on the same face of the helix as to Glu1089, are involved in determining the substrate specificity of the protein. Notably, elimination of the positively charged side chain of Lys1092, increased resistance to the cationic drugs vincristine and doxorubicin, but not the electroneutral drug etoposide (VP-16). In addition, mutations S1097A and N1100A selectively decreased transport of 17 -estradiol 17-( -D-glucuronide) (E217 G) but not cysteinyl leukotriene 4 (LTC4), demonstrating the importance of multiple residues in this helix in determining substrate specificity. In contrast, mutations of Asp1084 that eliminate the carboxylate side chain markedly decreased resistance to all drugs tested, as well as transport of both E217 G and LTC4, despite the fact that LTC4 binding was unaffected. We show that these mutations prevent the ATP-dependent transition of the protein from a high to low affinity substrate binding state and drastically diminish ADP trapping at nucleotide binding domain 2. Based on results presented here and crystal structures of prokaryotic ATP binding cassette transporters, Asp1084 may be critical for interaction between the cytoplasmic loop connecting TM13 and TM14 and a region of nucleotide binding domain 2 between the conserved Walker A and ABC signature motifs.
Human multidrug resistance protein 1 (MRP1),1 a 1531-amino acid integral membrane phosphoglycoprotein, was originally cloned from the doxorubicin-selected multidrug-resistant human small cell lung cancer cell line, H69AR (1). Subsequent to its cloning, expression of MRP1 protein and/or mRNA has been detected in a wide range of solid and hematological tumors (2-7). In some cases, MRP1 expression has been shown to correlate with clinical outcome (3, 5, 7-9). In vitro, MRP1 is able to confer resistance to many commonly used, structurally diverse natural product chemotherapeutic agents, including anthracyclines, epipodophyllotoxins, and Vinca alkaloids (10-14).
In addition to conferring drug resistance, transport studies using inside-out membrane vesicles prepared from MRP1-transfected cells have shown that MRP1 is capable of transporting glutathione-, glucuronate- and sulfate-conjugated organic anions such as the cysteinyl leukotriene 4 (LTC4), 17
MRP1, or ABCC1, is a member of the ABCC branch of the ATP binding cassette (ABC) superfamily. This branch also includes MRP2 to -6 (ABCC2 to -6), MRP7 to -9 (ABCC10 to -12), as well as the sulfonylurea receptors SUR1 (ABCC8) and SUR2 (ABCC9), and the cystic fibrosis transmembrane conductance regulator (CFTR/ABCC7) (27-31). The predicted topologies of MRP1 to -9 all contain a typical ABC transporter core region, composed of two hydrophobic membrane-spanning domains (MSDs), each with six transmembrane (TM)
Previously, we have shown that a negatively charged residue, Glu1089, within predicted TM14 is crucial for MRP1-mediated drug resistance, particularly with respect to the anthracyclines (37). We have also demonstrated that a number of polar amino acid residues in predicted TM17 of MRP1 are essential for MRP1 to confer drug resistance and/or to transport E217 G efficiently (38-40). In addition, these studies provided evidence for cross-talk between residues in the two TM helices (39). TM17 of MRP1 is topologically equivalent to TM12 of P-gp, which has been shown to be intimately involved in substrate binding and determination of substrate specificity (41). Similarly, TM 14 corresponds to TM 9 of P-gp, but the involvement of residues in this helix in determining substrate specificity or overall activity has only recently been identified (42, 43). In addition to Glu1089, TM14 of MRP1 contains two charged residues, Asp1084 and Lys1092, as well as four amino acid residues with polar side chains (Fig. 1). We have now characterized the role of all of these residues in determining the substrate specificity and/or overall activity of MRP1. These studies demonstrate that Lys1092, Ser1097, and Asn1100, which are all predicted to be on the same face of the helix, are important for defining the substrate specificity of MRP1 and that Asp1084 is critical for its overall activity. We also show that proteins in which Asp1084 has been mutated to non-carboxylic amino acids retain the ability to bind LTC4 with high affinity but are unable to shift into a low affinity binding state in the presence of ATP and vanadate. Finally, we demonstrate that the inability of the Asp1084 mutant protein to enter a transition state is attributable to a defect in the ability of NBD2 to hydrolyze ATP, as evidenced by a loss of vanadate-dependent trapping of ADP at this NBD.
MaterialsCulture medium and fetal bovine serum were obtained from Invitrogen. [3H]LTC4 (38 Ci/mmol) and [3H]GSH (52 Ci/mmol) were purchased from Amersham Biosciences, [3H]E217 G (44 Ci/mmol) from PerkinElmer Life Sciences, and 8-azido-[ -32P]ATP (11.8 Ci/mmol) from Affinity Labeling Technologies Inc. (Lexington, KY). Doxorubicin HCl, etoposide (VP-16), and vincristine sulfate were obtained from Sigma. Site-directed MutagenesisAll mutations were generated using the TransformerTM site-directed mutagenesis kit (Clontech, Palo Alto, CA). Templates were prepared as described previously (37-39). Mutagenesis was then performed according to the instructions from the manufacturer using a selection primer, 5'-GAG AGT GCA CGA TAT CCG GTG TG-3', that mutates a unique NdeI site in the vector to an EcoRV restriction site. Oligonucleotides bearing mismatched bases at the residues to be mutated (underlined) were synthesized by ACGT Corp. (Toronto, Ontario, Canada). They are as follows: T1082A (5'-C TCC AAG GAG CTC GAC GCA GTG GAC TCC-3'), D1084N (5'-CTG GAC ACA GTG AAT TCC ATG ATC CCG-3'), D1084A (5'-CTG GAC ACA GTG AAA TCG ATG ATC CCG-3'), D1084E (5'-CTG GAC ACA GTG GAC TCG ATG ATC CCG-3'), D1084V (5'-CTG GAC ACA GTG GTA TCG ATG ATC CCG-3'), S1085A (5'-CTG GAC ACA GTC GAC GCC ATG ATC CCG G-3'), K1092M (5'-C CCG GAG GTC ATC ATG ATG TTC ATG GGC-3'), K1092A (5'-C CCG GAG GTC ATC GCG ATG TTC ATG GGC-3'), K1092E (5'-C CCG GAG GTC ATC GAG ATG TTC ATG GGC-3'), K1092R (5'-C CCG GAG GTC ATC AGG ATG TTC ATG GGC-3'), S1097A (5'-G ATG TTC ATG GGC GCC CTG TTC AAC-3'), N1100A (5'-TTC ATG GGC TCG CTC TTC GCC GTC ATT GGT G-3'), N1100S (5'-TTC ATG GGC TCG CTC TTC AGT GTC ATT GGT G-3'). After confirming all mutations by DNA Thermo Sequenase Cy5.5 and Cy5.0 dye terminator cycle sequencing (Amersham Biosciences) according to the instructions from the manufacturer, DNA fragments containing the desired mutations were transferred into pCEBV7-MRP1. After reconstructing the mutations into the full-length clones, the integrity of the entire mutated inserts and cloning sites was verified by DNA sequencing (ACGT Corp.). Mutation D1084R was generated using the QuikChangeTM site-directed mutagenesis kit (Stratagene, La Jolla, CA). Templates were prepared as described previously (44). Mutagenesis was then performed according to the instructions from the manufacturer. Oligonucleotide bearing mismatched bases at the residues to be mutated (underlined) was synthesized by ACGT Corp. It is as follows: D1084R (5'-CTG GAC ACA GTG CGG TCC ATG ATC CCG-3'). After confirming the mutation by DNA sequencing (ACGT Corp.), DNA fragments containing the desired mutations were transferred into pcDNA3.1-MRP1.
Cell Lines and Tissue CultureStable transfection of HEK293 cells with the pCEBV7 vector containing the wild type and mutant MRP1 cDNAs has been described previously (13, 37-39). Briefly, HEK293 cells were transfected with pCEBV7 vectors containing mutant MRP1 using FuGENE 6 (Roche Molecular Biochemicals) according to the instructions from the manufacturer. After
Confocal MicroscopyConfocal microscopy was carried out as described previously (37-39). Briefly, Determination of Protein Levels in Transfected CellsPlasma membrane vesicles were prepared by centrifugation through sucrose, as described previously (13, 16). After determination of protein levels by Bradford assay (Bio-Rad), total membrane protein (0.5, 1.0, and 1.25 µg) from transfectants expressing wild type MRP1 and various mutant proteins were analyzed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) using a 7.5% gel. Proteins were subsequently transferred to Immobilon-P polyvinylidene difluoride membranes (Millipore, Bedford, MA) by electroblotting. The proteins were detected with mAb MRPm6 (Alexis Biochemicals, San Diego, CA). Antibody binding was detected with horseradish peroxidase-conjugated goat anti-mouse IgG (Pierce), followed by enhanced chemiluminescence detection and X-OmatTM Blue XB-1 films (PerkinElmer Life Sciences). Densitometry of the film images was performed using a Chemi-ImagerTM 4000 (Alpha Innotech Corp., San Leandro, CA). The relative protein expression levels were calculated by dividing the integrated densitometry values obtained for 0.5, 1.0, and 1.25 µg of total membrane proteins from transfectants expressing the mutant proteins by the integrated densitometry values obtained for the comparable amounts of total membrane proteins from transfectants expressing the wild type protein. Each comparison was performed at least three times in independent experiments. The results were then pooled and the mean values used for normalization purposes.
Expression of the NH2- and the COOH-proximal Half-molecules of MRP1 in SF21 CellsThe construction of the dual expression vector pFASTBAC Dual (Invitrogen) encoding the NH2- and the COOH-proximal half-molecules of MRP1 has been described previously (45). To generate MRP1D1084N-pFASTBAC Dual vector, pCEBV7-MRP1 containing mutation D1084N was digested with BstEII, and an Recombinant bacmids and baculoviruses were generated as described previously (45). The conditions used for viral infection were also similar to those described previously (45). Plasma membrane vesicles were prepared, and the expression levels of wild type and mutant protein in infected cells were determined, as described previously (13, 16). The NH2-proximal proteins were detected with mAb MRPr1 (Alexis Biochemicals), and the COOH-proximal proteins were detected with mAb MRPm6 (Alexis Biochemicals).
LTC4, E217
Km and Vmax values of ATP-dependent [3H]LTC4 uptake by membrane vesicles (2.5 µg of total proteins) were measured at various LTC4 concentrations (0.01-1 µM) for 1 min at 23 °C. in 25 µl of transport buffer containing 4 mM ATP and 10 mM MgCl2, followed by non-linear regression analyses. Kinetic parameters of ATP-dependent [3H]E217
GSH uptake was also measured by rapid filtration with membrane vesicles (20 µg of total proteins) incubated at 37 °C for 20 min in a 60-µl reaction volume with [3H]GSH (100 µM, 300 nCi). To minimize GSH catabolism by Photoaffinity Labeling of the Wild Type and Mutant Proteins with [3H]LTC4Wild-type and mutant MRP1 membrane proteins were photolabeled with [3H]LTC4 essentially as described previously (16, 46, 47). Briefly, membrane vesicles (50 µg of total proteins in 35 µl of transport buffer) were incubated with [3H]LTC4 (0.3 µCi, 200 nM) at room temperature for 10 min, frozen in liquid nitrogen, and UV-irradiated. Proteins were analyzed on a 5-15% gradient gel by SDS-PAGE. The gel was then fixed, treated with Amplify (Amersham Biosciences), dried, and exposed to film for 1 week at -70 °C.
Photolabeling of MRP1 by 8-Azido-[
Orthovanadate-induced trapping of 8-azido-[ Chemosensitivity TestingDrug resistance was determined using the colorimetric 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) assay as described previously (10, 11, 13). Briefly, cells were seeded at 7 x 103 cells/well in 100 µl of culture medium in 96-well tissue culture plate. The following day, various concentrations of drug diluted in culture medium were added to cells (100 µl/well). After incubation for an additional 72 h, 100 µl of medium was removed from each well and the MTT reagent (25 µl/well, 2 mg/ml) (Sigma) was added. After 3 h, the formazan was solubilized by mixing with HCl/isopropanol (1:24) (100 µl/well). Color density was determined using the ELX 800 UV spectrophotometer (Filter4, 570 nm). Mean values of quadruplicate determinations (±S.D.) were plotted using GraphPad software. IC50 values were obtained from the best fit of the data to a sigmoidal curve. Relative resistance is expressed as the ratio of the IC50 value of cells transfected with MRP1 expression vectors compared with cells transfected with empty vector. Resistance was determined in three or more independent experiments.
Expression of Mutant MRP1 in Stably Transfected HEK293 CellsTo examine the functional importance of charged and polar residues in TM14 of MRP1, we generated a series of six mutant proteins in which Thr1082, Ser1085, Ser1097, and Asn1100 were replaced with Ala, Asp1084 was replaced with Asn, and Lys1092 was mutated to Met (Fig. 1). The episomal expression vector, pCEBV7, containing mutated forms of MRP1 cDNAs was used to stably transfect HEK293 cells and populations of transfected cells were selected in hygromycin B. The resultant stably transfected cell populations were cloned by limiting dilution and subpopulations expressing high levels of MRP1 mutant proteins were used in subsequent studies. The levels of mutant proteins relative to wild type MRP1 in previously characterized HEK transfectants were determined by immunoblotting and densitometry (Fig. 2A). The level of each mutant protein was approximately equivalent to that of wild type MRP1. Endogenous MRP1 in HEK293 cells transfected with the empty vector was undetectable under the conditions used (data not shown).
To determine whether these mutations influenced trafficking of the protein, we compared the subcellular localization of wild type and mutant MRP1 by confocal microscopy. As shown in Fig. 2B, the subcellular distribution of the mutated proteins assessed by immunoreactivity with the MRP1-specific mAb MRPm6 was indistinguishable from that of cells expressing wild type protein. In all cases, strong plasma membrane staining was observed and no differences in membrane distribution were detected between mutant and wild-type proteins.
Transport of [3H]LTC4 and [3H]E217
ATP-dependent transport of [3H]E217 G was unaffected by the T1082A, S1085A and K1092M mutations (Fig. 3, D-F), but substitution of Ser1097 with Ala and conversion of Asp1084 to Asn both dramatically decreased transport. Replacement of Asn1100 with Ala also decreased transport efficiency by 30-40%. Thus, mutations S1097A and N1100A only affected transport of the estrogen conjugate, whereas mutation D1084N decreased the ability of MRP1 to transport both LTC4 and E217 G.
Resistance Profiles of Wild Type and Mutant Human ProteinsThe drug resistance profiles of transfectants expressing mutant proteins were determined using MTT assays. The results are presented as relative drug resistance factors in Table I. Mutations T1082A, S1085A, and N1100A had no significant effect on drug resistance, but conversion of one polar residue, Ser1097, to Ala caused a 2-3-fold decrease in resistance to vincristine, VP-16, and doxorubicin. Similarly, mutation D1084N also affected the drug resistance profile of MRP1. The D1084N mutant protein essentially lost its ability to confer resistance to vincristine and doxorubicin, and retained only
Transport of [3H]GSH by Wild Type and Mutant MRP1The studies described above indicated that mutations S1097A and D1084N affected the ability of MRP1 to confer drug resistance and to transport conjugated organic anions, whereas the K1092M mutation influenced only the drug resistance profile of MRP1. One major distinction between MRP1-mediated transport of the conjugated substrates, LTC4 and E217 G, and drugs such as vincristine and VP-16, is a requirement for GSH, which may be co-transported with the unmodified drug (48, 49). Previously, we have reported that MRP1 exhibits low levels of ATP-dependent GSH transport that can be stimulated by compounds such as verapamil (50). Consequently, we examined the effects of TM14 mutations on verapamil-stimulated GSH transport to determine whether those that affected drug resistance also influenced transport of GSH (Fig. 4). As observed when examining LTC4 transport, only replacement of Asp1084 by Asn influenced the ability of MRP1 to transport GSH, and this mutation essentially eliminated transport activity. Other mutations, including mutations S1097A and K1092M that altered the drug resistance profile of MRP1, had no effect. These findings suggest that the effects of mutations S1097A and K1092M on MRP1-mediated drug resistance appear to result primarily from changes in the ability to interact with the drug substrate rather than GSH.
Kinetic Parameters of [3H]LTC4 and [3H]E217 G Transport by Wild Type and Mutant MRP1Because mutation D1084N affected the ability of the protein to transport both LTC4 and E217 G whereas mutations S1097A and N1100A selectively decreased the transport of only E217 G, we compared their effect on the kinetic parameters of transport of both substrates (Fig. 5). For E217 G transport, the normalized Vmax values for mutations D1084N, S1097A, and N1100A were lower than that for wild type MRP1 (3207 pmol/mg/min for wild type MRP1, versus 151, 2279, and 1852 pmol/mg/min for mutations D1084N, S1097A and N1100A, respectively) (Fig. 5A and Table II). The apparent Km value for mutation N1100A (1.9 µM) was comparable with that of the wild type protein (1.6 µM). However, replacement of Asp1084 with Asn decreased the Km value 3-fold (0.5 µM). On the other hand, mutation S1097A significantly increased the Km value (28.4 µM) (Fig. 5A and Table II). Thus, although mutations D1084N, S1097A, and N1100A all decreased the conjugated estrogen transport, the three mutations had different effects on the apparent Km values for E217 G uptake.
For LTC4 uptake, the Km values for wild type MRP1 and mutant MRP1S1097A and MRP1N1100A were essentially identical (146, 141, and 138 nM for wild type MRP1 and mutations S1097A and N1100A, respectively) and the normalized Vmax values for mutations S1097A and N1100A were also very similar with that of wild type MRP1 (223, 208, and 242 pmol/mg/min for mutations S1097A, N1100A, and wild type MRP1, respectively) (Table II). However, replacement of Asp1084 with Asn decreased the values of normalized Vmax and the apparent Km for LTC4 transport 8- and 2-fold, respectively (30 pmol/mg/min, and 77 nM for mutation D1084N) (Fig. 5B and Table II). Thus, similar to the results obtained with E217 G as a substrate, the D1084N mutation appeared to increase the affinity of MRP1 for substrate while decreasing the Vmax.
Effect of Mutation D1084N on Photolabeling of MRP1 with [3H]LTC4 and 8-Azido-[
Using a baculovirus dual expression system, we have demonstrated previously that, at 4 °C, NBD1 of MRP1 is preferentially labeled with 8-azido-[32P]ATP, whereas at 37 °C in the presence of vanadate, trapping of 8-azido-[32P]ADP occurs predominantly at NBD2 (45). To investigate the effect of mutation D1084N on the trapping of ATP more precisely, we took advantage of a pFASTBAC Dual vector, in which the COOH-proximal MRP1 fragment (amino acids 932-1531) was modified to contain mutation D1084N, and co-expressed with a wild type NH2-proximal fragment (amino acids 1-932). The wild type and mutant MRP1-pFASTBAC Dual vectors were then used to infect SF21 cells. The expression levels of both NH2- and COOH-proximal of fragments encoded by the mutant MRP1D1084N pFASTBACK Dual vector were only slightly lower than those the wild type half-molecules (Fig. 7A). The ATP-dependent LTC4 uptake by reconstituted mutant and wild type proteins was then determined by transport assays (Fig. 7B). As observed with results obtained from analyses of membrane vesicles prepared from HEK293 cells stably transfected with full-length mutant MRP1D1084N, replacement of Asp1084 by Asn essentially eliminated the transport activity. Photolabeling of mutant dual-half proteins with [3H]LTC4 was also carried out. As shown in Fig. 7C, the labeling of both the NH2- and the COOH-proximal halves of the wild type and mutant proteins was proportional to their relative expression levels, indicating that the mutation had not affected LTC4 photolabeling of either half of the protein. In addition, we observed that ATP could significantly decrease the labeling of the NH2- and the COOH-proximal halves of wild type MRP1 and that the effect of ATP on the labeling was further enhanced in the presence of vanadate (Fig. 7C), consistent with previous studies (46). However, the labeling of both the NH2- and the COOH-proximal halves of mutant MRP1D1084N with LTC4 was unaffected by ATP (Fig. 7C). Vanadate-induced trapping experiments revealed that replacement of Asp1084 by Asn dramatically reduced trapping of 8-azido-ADP by both NBD1 and NBD2 of MRP1 (Fig. 7E), strongly suggesting that it decreased the ability of both NBDs to hydrolyze ATP.
Effects of Mutations D1084A, D1084E, D1084V, D1084R, K1092A, K1092E, K1092R, and N1100S on Transport of [3H]LTC4 and [3H]E217 G by Wild Type MRP1Because mutation D1084N dramatically affected all of the MRP1 functions tested, we also mutated Asp1084 to Ala, Glu, Arg, and Val. In addition, because of the effect of the K1092M mutation on the drug resistance profile of MRP1, Lys1092 was converted to Ala, Glu, and Arg. Replacement of Asn1100 with Ala selectively decreased the transport of E217 G. This residue is not conserved between the human and rodent proteins. In both rat and mouse MRP1, the comparable residue is Ser. We have shown previously that both rodent proteins transport E217 G far less efficiently than human MRP1 and that non-conserved amino acid residues located within a region between amino acids 959 and 1197 of human MRP1 are partially responsible for the higher efficiency with which the human protein transports E217 G (51, 52). To date only one such residue, Glu1089, has been identified (37). Consequently, we also mutated Asn1100 to Ser, as it is in the rodent proteins. These mutations were then stably expressed in HEK293 cells. The expression levels of these mutant proteins in stably transfected HEK293 cells were similar to that of wild type MRP1 (Fig. 8A).
The effects of all of the mutations on the ability of MRP1 to transport LTC4 and E217 G are shown in Fig. 8 (B and C). Mutations K1092A, K1092R, and K1092E had no effect on transport of either LTC4 or E217 G. Mutation N1100S, like N1100A, decreased only E217 G transport. In contrast, replacement of Asp1084 with Ala, Arg, and Val dramatically decreased the ability of MRP1 to transport both LTC4 and E217 G, whereas conversion to Glu also resulted in an approximate 50% decrease in transport of both substrates. We also examined the ability of the mutants D1084E and D1084R to bind [3H]LTC4 by photolabeling studies. As shown in Fig. 8E, the relative normalized densitometry values of photolabeling of D1084E and D1084R with [3H]LTC4 were 120 and 100, respectively. Thus, similar to the results obtained with photolabeling of mutant D1084N with LTC4, substitution of Asp1084 by Arg or Glu had no significant effect on the photolabeling. These results further confirmed that Asn1100 is involved in the efficient transport of E217 G, and that Asp1084 is important for transporting conjugated organic anions by MRP1. Effects of Mutations on Drug Resistance Profile of MRP1 The capacity of these mutant proteins to confer drug resistance was also examined by MTT assay (Table III). Mutation N1100S had no effect on the drug profile of MRP1. The mutation K1092R also showed the same phenotype as wild type MRP1, whereas mutations K1092A and K1092E, like K1092M, increased the ability of MRP1 to confer resistance to vincristine and doxorubicin but not to VP-16. Substitution of Asp1084 by Ala and Val, as observed with mutation D1084N, significantly reduced resistance to vincristine, VP-16, and doxorubicin. Interestingly, replacement of Asp1084 with a conserved residue, Glu, resulted in a mutant protein with decreased ability to confer resistance to vincristine and doxorubicin, but unaltered ability to confer VP-16 resistance, (Table III). These findings suggest that size together with charge in the side chain of residue at position 1084, and positive charge in the side chain of residue at position 1092 are important for determining the drug resistance profile of MRP1.
Unlike MRP1, orthologs from mouse, rat, and cow fail to confer anthracycline resistance (13, 52, 53). We have shown that this is caused at least in part by the presence of Glu position 1089 in MRP1 rather than Gln, which is found at the comparable locations in the mouse and rat proteins. Conservative mutation of Glu1089 of MRP1 to Asp has little effect on substrate specificity. However, elimination of the carboxylate side chain by mutation to Gln completely eliminates amthracycline resistance (37). Glu1089 is predicted to be in the middle of TM14 of MRP1. The topologically comparable TM helix in P-gp, because of the five additional NH2-proximal TMs in MRP1, is TM9. Amino acids in this helix have also been demonstrated recently to contribute to the specificity of substrate binding of hamster and human P-gp (42, 43). For example, Ala841, predicted to be the middle of TM9 of P-gp, appears to be involved in the binding of rhodamine dyes (42). In addition, we have shown that certain residues with side chain hydrogen bonding potential, clustered in the cytoplasmic half of TM17 of MRP1 contribute to defining substrate specificity (38-40). These studies also revealed a highly specific functional interaction between residue Glu1089 in TM14 and residue Thr1242 in TM17 of MRP1 that enables the protein to efficiently confer vincristine and VP-16 resistance (39).
Other than Glu1089, the only other negatively charged amino acid in TM14 is Asp1084. Rather than being involved in determining substrate specificity, the carboxylate side of Asp1084 was critical for the overall activity of MRP1. Replacement of Asp1084 with various neutral amino acid residues Asn, Ala, or Val dramatically decreased all of the MRP1 functions tested. In contrast, conservative substitution of Asp1084 with Glu resulted in a mutant protein which retained
In addition, we also demonstrated the important role of Lys1092, Ser1097, and Asn1100 in defining the substrate specificity of MRP1. Elimination of a positive charge in the side chain of the residue at position 1092 drastically increased resistance to the cationic drugs vincristine and doxorubicin, but had no effect on resistance to the electroneutral drug VP-16, or the transport of organic anionic conjugates. On the other hand, mutations S1097A, N1100A, and N1100S reduced E217
The manner in which each residue of MRP1 interacts with its different substrates is not yet known. We have proposed that the formation of multiple overlapping sets of hydrogen bonds may be may important for the protein to interact with such a structurally diverse spectrum of substrates (38-40, 44, 54-56). Consistent with this possibility, mutation S1097A significantly increased the Km value for E217 G transport without affecting transport of LTC4, suggesting that the hydrogen bonding capability of Ser1097 may be involved specifically in the interaction of the conjugated steroid with the protein. Substitution of Ser1097 with Ala also dramatically decreased resistance to all three drugs tested. A large body of evidence has suggested that unmodified drugs are transported by MRP1 via a co-transport mechanism with reduced glutathione (48, 49). However, in the present study, we did not observed any effect of mutation S1097A on verapamil-stimulated GSH transport by MRP1. These findings suggest that Ser1097 might be involved in the interaction of MRP1 with the drug substrate rather than GSH. In addition, in contrast to the effect of mutation S1097A on E217 G transport, mutation N1100A, which only affected the transport of E217 G, decreased the Vmax without significantly affecting Km, suggesting that the mutation affects a step in the transport process subsequent to initial binding of this substrate. Asn1100 is not conserved among the human and rodent proteins. In rat and mouse MRP1, the comparable residue is Ser. As indicated above, although both mouse and rat MRP1 transport LTC4 with efficiencies similar to that of the human protein, they are relatively poor transporters of E217 G (13, 52). We recently showed that conversion of Ser1101 in TM14 of rat MRP1 to Asn, as it is in human MRP1, increased the ability of rat protein to transport the glucuronidated estrogen (52). Consistent with these results, we found that replacement of Asn1100 in human MRP1 with either Ala or Ser, as in the mouse and rat proteins, decreased E217 G transport efficiency by 30%. Taken together, these findings confirm the importance of Asn1100 in the relatively efficient transport of E217 G by the human protein.
More recently, we reported that positively charged residues Lys322, predicted to be in TM6, and Arg1249, predicted to be close to a TM-cytoplasm interface, are critical for the capacity of the human protein to transport LTC4 (55, 57).2 In the present study, we found that mutations of Lys1092, predicted to be in the middle of TM14 of MRP1, had no effect on the transport of LTC4 and E217
The fact that elimination of the negative charge at position 1084 had a major effect on the overall activity of MRP1 raised the possibility that such mutations may have affected folding and trafficking of the protein. However, confocal microscopy revealed no evidence of a trafficking defect that might be indicative of misfolding. Photolabeling studies with [3H]LTC4 also showed that the replacement of Asp1084 by Asn and Glu had no effect on binding of the substrate to the protein. This observation strongly suggests that the mutations had not resulted in a major perturbation of the structure of the protein and, furthermore, that Asp1084 was not involved in the binding of LTC4. This differs from results we obtained recently following mutational analyses of Asp336 which is predicted to be in TM6. Mutations of Asp336 abolished the transport of LTC4, but they also eliminated LTC4 binding (55). In the present study, kinetic analyses of the residual transport activity of the D1084N mutant protein yielded a lower Km for both LTC4 and E217
Asp1084 of MRP1 is predicted by a number of topology algorithms and by modeling of the MRP1 MSD structures, using the crystal structure of MsbA as a template, to be very close to the cytoplasm-membrane interface of TM14. Such analyses also predict that the TM14 helix is continuous with a helix that extends to Pro1068 in the cytoplasmic loop connecting with TM13 (Fig. 9B). The crystal structure of the comparable cytoplasmic loop in MsbA, which is a lipid A transporter from Escherichia coli, indicates that the loop forms a U-like configuration consisting of three
* This work was supported in part by a grant from the National Cancer Institute of Canada with funds from the Terry Fox Run and by Grant MOP-10519 from the Canadian Institutes of Health Research. The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
|| Recipient of a Canadian Institutes of Health Research postdoctoral award.
** Canada Research Chair in Cancer Biology and Senior Scientist of Cancer Care Ontario.
1 The abbreviations used are: MRP, multidrug resistance protein; P-gp, P-glycoprotein; CFTR, cystic fibrosis transmembrane conductance regulator; MSD, membrane-spanning domain; TM, transmembrane; NBD, nucleotide binding domain; mAb, monoclonal antibody; E217
2 D. Situ, manuscript in preparation.
We thank Jimmy Zhang and Chris Westlake for assistance with preparation of Fig. 9B.
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