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J. Biol. Chem., Vol. 279, Issue 14, 14120-14128, April 2, 2004
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From the Department of Pharmacology, University of Iowa College of Medicine, Iowa City, Iowa 52242
Received for publication, August 27, 2003 , and in revised form, January 16, 2004.
| ABSTRACT |
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subunit-like) domains in addition to the hallmark RGS domain. RGS proteins negatively regulate heterotrimeric G protein signaling by virtue of the GTPase-activating protein activity of their RGS domains. RGS6 exists in multiple splice forms with a long (6L) or short (6S) N terminus, a complete or incomplete GGL domain, in combination with various C-terminal domains. Green fluorescent protein-tagged RGS6L and RGS6S forms exhibit predominantly cytoplasmic and nuclear patterns of distribution in COS-7 cells, respectively, and traffic from these sites to nucleoli in response to stress signaling. We undertook a yeast two-hybrid screen for nuclear RGS6-binding proteins and here identify DMAP1 as an RGS6-interacting protein. DMAP1 is a component of the Dnmt1 complex involved in repression of newly replicated genes. The domains of interaction were mapped to the N-terminal region of the GGL domain of RGS6, a region distinct from its G
5 binding region, and the C-terminal domain of DMAP1. G
5 and DMAP1 did not compete for each other's interaction with RGS6. Co-immunoprecipitation studies in COS-7 cells showed that RGS6L and RGS6S, but not RGS6L
258-293 deletion mutant lacking a DMAP1-binding module, co-immunoprecipitate DMAP1 as well as Dnmt1 in a DMAP1-dependent manner. A recombinant GGL domain of RGS6 precipitated endogenous DMAP1 and Dnmt1 in neuroblastoma cell lysates and endogenous DMAP1 co-immunoprecipitated with RGS6L from mouse brain. Co-expression of DMAP1 with RGS6L promoted nuclear migration of RGS6L and its co-localization with DMAP1, a response not observed with RGS6L
258-293. RGS6 inhibited the transcriptional repressor activity of DMAP1. RGS6 is the first member of the RGS protein family shown to interact with proteins involved in transcriptional regulation. | INTRODUCTION |
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120 amino acids called the RGD. In mammals, 30 genes encode proteins with this domain, with alternative splicing of some RGS transcripts contributing additional diversity within this family. The RGD is responsible for the GTPase-activating activity of RGS proteins toward G protein
subunits, providing a mechanism by which RGS proteins inactivate G
subunits, leading to their recombination with G
subunits, thereby terminating signaling by G
and G
subunits (3, 4). Interference with G protein signaling by some RGS proteins may involve interactions with receptors that activate G proteins (5) or with effectors acted upon by G proteins (6, 7). Yet recent evidence from our laboratory and others (8-14) has shown that several RGS proteins are localized at sites other than the plasma membrane, including the nucleus, where G proteins and their activating receptors and effectors are not believed to exist. We showed that some RGS proteins localize predominantly in the nucleus (RGS2 and RGS10) or at unique subnuclear sites (RGS12TS) and that others are nucleocytoplasmic shuttle proteins (RGS4 and RGS16) (8). We demonstrated that the semiconserved RGS domain contains nuclear targeting signals and that some RGS proteins possess a prototypic nuclear export signal that allows them to shuttle back out of the nucleus. These findings raise questions of considerable interest and importance regarding the possible role of nuclear RGS proteins.
Recently, we identified 36 splice variant forms of RGS6 (15), a member of the R7 subfamily of RGS proteins that possess DEP (Drosophila/EGL10/Pleckstrin) homology and GGL (G protein
subunit-like) domains in addition to an RGS domain. Of interest, all splice forms possessed the same RGD but had long (6L) or short (6S) N-terminal domains, existing with a complete or incomplete (-GGL) GGL domain and nine different C-terminal tails. RGS6L and RGS6S splice forms, upon expression in cells, exhibited predominant localization in the cytoplasm and nucleus, respectively. In a related study, we showed that mild heat or proteotoxic stress, known activators of the heat shock response pathway, promoted trafficking of these proteins from their cytoplasmic or nuclear sites to nucleoli, providing new evidence linking RGS proteins to the stress signaling pathway (16). Mapping of the stress-induced targeting domain in RGS6 proteins identified the RGS domain, the defining structural element of this protein family, as a primary determinant in stress-induced nucleolar targeting, and we demonstrated similar nucleolar accumulation of a variety of RGS proteins in response to proteotoxic stress.
In an attempt to provide insight into the functional role of RGS proteins in the nucleus, we employed yeast two-hybrid analysis to identify proteins that interact with RGS6, one of the RGS proteins we found to exhibit constitutive or signaling-induced trafficking to and within the nucleus. Here we report a high affinity interaction between RGS6 and DMAP1, a protein identified and named based upon its interaction with Dnmt1 (17). DMAP1 has transcriptional repressor activity, and Dnmt1 is a multifunctional protein that is a critical DNA methyltransferase important for chromatin structure and gene silencing as well as methyltransferase-independent transcriptional repression (17-21). Our studies demonstrate interaction of RGS6 and DMAP1 in yeast and mammalian cells and define the structural determinants required for this interaction. We define a new structural motif within the GGL domain of RGS6, identified originally as a binding motif for G
5 (22), that mediates its high affinity interaction with DMAP1, and we show that RGS6 interacts with Dnmt1 in a DMAP1-dependent manner. Binding of DMAP1 and G
5 to RGS6 is not mutually exclusive. RGS6 and DMAP1 were shown to interact in the context of whole cells, and this interaction was dependent upon the identified DMAP1-binding module of RGS6. RGS6, but not the DMAP1-interacting proteins TSG101 and Dnmt1, inhibited the functional activity of DMAP1 as a transcriptional repressor, demonstrating that the interaction between RGS6 and DMAP1 is functionally relevant. RGS6 is the first member of the RGS protein family shown to interact with proteins involved in transcriptional regulation. These results provide new evidence linking RGS proteins to proteins involved in regulating gene expression.
| EXPERIMENTAL PROCEDURES |
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5 was a generous gift of Dr. William Simonds (National Institutes of Health) and Dr. Vladen Slepak (University of Miami), respectively. Anti-FLAG-HRP and anti-Dnmt1 polyclonal antibody was from Santa Cruz Biotechnology. Anti-FLAG M2 antibody was from Sigma, and anti-DMAP1 polyclonal antibody was from Affinity Bioreagents. Cy5-conjugated secondary antibody was from Jackson ImmunoResearch. Ni-NTA Superflow was from Qiagen. pcDNA3.1/His-Dnmt1 was a kind gift from Dr. Szyf (McGill University). Anti-RGS6L-conjugated agarose was prepared using the Immunopure rProtein A IgG Plus orientation kit from Pierce.
PCR Amplification/Preparation of EGFP-RGS6, FLAG-DMAP1, and FLAG-TSG101 ConstructsAll of the human RGS6 protein constructs prepared and used in this study correspond to the C-terminal splice forms that we designated
2 (15). Full-length human DMAP1 was PCR-amplified using gene-specific primers and human brain cDNA library as template. Various RGS6 cDNAs, DMAP1, and TSG101 protein cDNAs were PCR-amplified using gene-specific primers incorporating restriction sites to facilitate their cloning into EGFP vector or pCMV2B vector. Amplified RGS6 or DMAP1 cDNAs with appropriate restriction sites were first cloned in the T/A cloning vector pCR2.1 (Invitrogen). Then restriction enzyme digestion and agarose gel purification of the cloned cDNAs were performed. RGS6 cDNAs were ligated to EGFP vector in-frame with its C- or N-terminal EGFP sequence, and DMAP1 protein cDNAs were ligated to pCMV2B vector in-frame with its N-terminal FLAG tag. A deletion mutant of RGS6L, in which part of the GGL domain was deleted (RGS6L
258-293), was prepared by PCR using a pair of primers that each "straddled" the flanking region of the deleted sequence (amino acids 258-293) and thus complementary to each other. The resulting PCR product was purified and used as template with outer primers to amplify the full-length sequence with the deleted region, followed by cloning as described above.
Cell Culture and TransfectionCOS-7 and SH-SY5Y cells were grown in Dulbecco's modified Eagle's medium supplemented with 10% fetal bovine serum and gentamycin (50 µg/ml) (complete Dulbecco's modified Eagle's medium) in a 5% CO2 humidified atmosphere at 37 °C. COS-7 cells were transiently transfected with vectors containing various RGS6 cDNAs, DMAP1, and/or Dnmt1 by electroporation as described (8). Cells were used in experiments
40 h following transfection.
Yeast Two-hybrid Screening and
-Galactosidase AssaysFull-length RGS6L and RGS6S, various truncation mutants of RGS6L, and truncation mutants of DMAP1 were PCR-amplified using gene-specific primers incorporating restriction sites to facilitate their cloning into pGBKT7 or pACT2 vector. First, amplified cDNAs were cloned in pCR2.1 (Invitrogen). Then restriction enzyme digestion and agarose gel purification of the cloned cDNAs was performed. RGS6 cDNAs were ligated to pGBKT7 vector, and DMAP1 cDNAs were ligated to pACT2 vector. Constructs cloned into the pGBKT7 vector were fused to an N-terminal Gal4 DBD, and constructs cloned into the pACT2 vector were fused to a N-terminal Gal4 DNA activating domain.
pGBKT7-RGS6S was used to screen a human brain cDNA library cloned into pACT2 vector. The yeast strain AH109 was transformed with pGBKT7-RGS6S and mated with the yeast strain Y187 already transformed with human brain cDNA library. An estimated 107 diploid clones were screened. Yeast clones containing interacting proteins were identified by growth on selective media lacking leucine, tryptophan, histidine, and adenine and confirmed by
-galactosidase activity.
RGS6L and its truncation mutants fused with Gal4 DBD were co-transformed with different DMAP1 truncation mutants fused with Gal4 activating domain into AH109 cells. The activity of the reporter gene
-galactosidase was then assessed by liquid culture assay using o-nitrophenyl
-D-galactopyranoside as a substrate.
Fluorescence and ImmunofluorescenceTransfected cells were rinsed three times with DPBS before fixation for fluorescence or immunofluorescence studies. For visualization of GFP-tagged RGS proteins, cells were fixed by treatment with 4% paraformaldehyde for 20 min at room temperature. For immunodetection of FLAG epitope, cells were fixed by treatment with 4% paraformaldehyde for 20 min at room temperature followed by permeabilization with DPBS containing 0.1% Triton X-100, 0.1% Nonidet P-40 for 10 min at room temperature. Cells were incubated with anti-FLAG M2 antibody (
1 µg/ml) in DPBS containing 5% bovine serum albumin for 1 h at room temperature. Cells then were rinsed three times with DPBS, incubated with Cy5-conjugated secondary antibodies (
1 µg/ml) in DPBS for 1 h at room temperature, and washed three times with DPBS. Finally, cells were air-dried and mounted using Vecta Shield mounting solution. Images shown are representative of a minimum of 400 cells derived from four or more separate transfections.
Co-immunoprecipitationsFor co-immunoprecipitation studies, COS-7 cells were co-transfected with GFP-tagged forms of RGS6 proteins and FLAG-tagged DMAP1, with or without G
5, and grown for 48 h in 10-cm tissue culture dishes. Cells were harvested by lysis with 200 µl of ice-cold RIPA buffer (150 mM NaCl, 50 mM Tris-HCl, pH 7.5, 0.5% deoxycholate, 1% Nonidet P-40, 6 mM MgCl2, and 10 mM phenylmethylsulfonyl fluoride) followed by centrifugation at 16,000 x g for 1 min at 4 °C. Resulting supernatants were incubated with anti-GFP and protein A-conjugated agarose overnight at 4 °C. Immunoprecipitates were collected by centrifugation, washed three times in RIPA buffer, suspended in Laemmli sample buffer, and boiled for 3 min. Proteins were subjected to SDS-PAGE and immunoblotting with anti-GFP antibody and anti-FLAG-HRP. For co-immunoprecipitation studies on RGS6 and Dnmt1, COS-7 cells were co-transfected with GFP-tagged forms of RGS6 proteins and His6-tagged Dnmt1 with or without FLAG-tagged DMAP1 and grown for 48 h in 10 cm of tissue culture. The cell lysate was processed and subjected to immunoprecipitation by using anti-GFP antibody as described above. Proteins were subjected to SDS-PAGE and immunoblotting with anti-GFP antibody and anti-polyhistidine antibody.
For co-precipitation studies in mouse brain, an adult mouse brain was homogenized in 1 ml of ice-cold RIPA buffer and centrifuged at 23,000 x g for 20 min at 4 °C. Anti-RGS6L-conjugated agarose (70 µl) was added to the resulting supernatant. After incubation overnight at 4 °C, agarose beads were collected by centrifugation, washed three times with 1 ml of RIPA buffer, and then resuspended in 50 µl of Laemmli sample buffer. Proteins were subjected to SDS-PAGE and immunoblotting with anti-GFP and anti-RGS6L antibodies.
Preparation of Recombinant GGL Domain Protein and in Vitro Pull-down AssaysA cDNA encoding amino acids 258-319 of RGS6L, encompassing the GGL domain and 10 amino acids C-terminal to the GGL domain, was PCR-amplified and cloned into pTrcHis2 TOPO TA vector (i.e. fused to the C-terminal hexahistidine tag from the vector). This RGS6 GGL domain construct was transformed into DH5
bacteria and cultured overnight. The culture was inoculated in new LB medium, and protein expression was induced by addition of 1 mM isopropyl-1-thio-
-D-galactopyranoside using standard methods. Bacteria were harvested by centrifugation at 5,000 x g for 20 min, and the resulting pellets were resuspended in 20 ml of lysis buffer (50 mM NaH2PO4, pH 8.0, 300 mM
NaCl, 25 mg of lysozyme) and incubated on ice for 30 min. After brief sonication, supernatants were collected by centrifugation at 10,000 x g for 20 min and loaded onto a column filled with 2 ml of Ni-NTA slurry. The column was washed with 10 ml of wash buffer (50 mM NaH2PO4, pH 8.0, 300 mM NaCl, 20 mM imidazole), and the Ni-NTA/protein mixture was collected and an aliquot subjected to SDS-PAGE to check for protein purity.
For in vitro pull-down assay, a T150 flask of neuroblastoma SH-SY5Y cells (
107 cells) was lysed in 2 ml of ice-cold RIPA buffer and subjected to pull down by mixing with either empty Ni-NTA beads or RGS6 GGL domain-bound Ni-NTA beads, both of which were pre-incubated in RIPA buffer. The beads were rocked for 4 h at 4 °C, collected, washed three times with RIPA buffer, and then resuspended in sample buffer. Samples were heated briefly and subjected to SDS-PAGE and immunoblotting with anti-DMAP1 antibody and anti-Dnmt1 antibody.
Luciferase AssayLuciferase reporter gene construct containing five repeats of the Gal4-binding element and the herpesvirus thymidine kinase (TK) promoter was PCR-amplified and cloned in the pGL3 basic vector (Promega). Gal4 DBD fusion constructs of DMAP1 were cloned into the pM vector. NIH3T3 cells were transfected with various DNA constructs using LipofectAMINE Plus (Invitrogen) according to the manufacturer's protocol. Luciferase activity in transfected cells was determined with a luciferase assay kit (Promega) 40 h following transfection. Immunoblotting was performed on cell lysates derived from cells transfected in replicate wells to compare expression of proteins (RGS6, Dnmt1, and TSG101) tested for their ability to modulate the transcriptional activity of DMAP1. Luciferase activity was normalized for transfected
-galactosidase determined with a Galacto chemiluminescence assay kit.
| RESULTS |
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RGS6-DMAP1 Minimal Interaction RequirementsWe initiated our studies by determining the structural sequences involved in interaction between RGS6 and DMAP1 in yeast. We examined interaction of RGS6L, RGS6S, and various RGS6 truncation mutants with the C-terminal region of DMAP1 identified as an RGS6S-binding region in our two-hybrid screen and DMAP1 truncation mutants of this region. RGS6 and DMAP1 constructs were used as bait and target proteins, respectively, and the relative strength of interaction between these proteins was assessed by
-galactosidase assays. p53 interaction with T antigen served as a positive control, and interaction of vector controls for the identified RGS6- and DMAP1-interacting regions were included as negative controls.
Fig. 1 illustrates the constructs examined and the results obtained. As shown, both RGS6L and an RGS6 mutant truncated before the GGL domain interacted with the C-terminal DMAP1 protein as strongly as RGS6S. These results suggest that the site of interaction between RGS6 proteins and this region of DMAP1 is not unique to RGS6S and does not require sequences N-terminal to the GGL domain. However, further truncation to remove the GGL domain caused a loss of interaction with DMAP1, suggesting its involvement in interaction between RGS6 proteins and DMAP1. This finding was confirmed by showing that constructs encoding the GGL domain and 10 additional C-terminal amino acids (258-319) or the GGL domain alone (258-309) interacted with the DMAP1 protein as strongly as that of full-length RGS6S or RGS6L. The interaction site within the GGL domain was further defined, by analysis of other truncation mutants, to the N-terminal 36 amino acids of the GGL domain (258-293). Most interesting, RGS6(-GGL) splice forms possess only the first 28 N-terminal amino acids of the GGL domain. Thus, it was interesting to compare the interaction of this domain (258-285) to that of the identified DMAP1-interacting region within the GGL domain. As shown the truncated GGL domain present in RGS6(-GGL) splice forms interacted with the DMAP1 protein, although this interaction was weaker than that observed with the complete GGL domain or construct 258-293. These findings suggest that RGS6(-GGL) splice forms may interact with DMAP1, although this interaction may not be as strong as that of splice forms with complete GGL domains. These studies identify the site of interaction of RGS6 proteins with the DMAP1 protein to a specific sequence module present in the GGL domain and that sequences N- or C-terminal to this region are not required and do not affect GGL domain interactions with this protein.
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RGS6 Interaction with DMAP1 and Dnmt1 in COS-7 CellsIt seemed essential to determine whether the interaction we observed between RGS6 and DMAP1 in yeast occurred in mammalian cells and whether this interaction was mediated by the identified region within the GGL domain of RGS6. Thus, we performed co-immunoprecipitation assays in COS-7 cells transfected with FLAG-tagged DMAP1 and various GFP-tagged forms of RGS6 or an RGS6L deletion mutant (RGS6L
258-293) lacking the region of the GGL domain we identified as the DMAP1-interacting domain in yeast (Fig. 1). We used both RGS6L and RGS6S and their -GGL splice forms, the latter proteins possessing only the N-terminal 28 amino acids (258-285) of the GGL domain but being otherwise identical to their RGS6L and RGS6S counterparts. We examined co-immunoprecipitation of DMAP1 by RGS6 proteins, by subjecting cell lysates to immunoprecipitation with anti-GFP antibodies followed by immunoblotting with anti-GFP or anti-FLAG. Anti-GFP immunoblotting was used to show the efficacy of the precipitation reaction. The top panel of Fig. 2 shows the result of these experiments. As shown, DMAP1 efficiently co-precipitated with RGS6L and RGS6S and slightly less efficiently with the -GGL splice forms of these proteins. However, no co-precipitation was observed with the RGS6L deletion mutant (RGS6L
258-293). These differences were not due to differences in the level of expression of RGS6 proteins or of DMAP1 or in the efficiency of their immunoprecipitation. These results demonstrate that DMAP1 interacts with RGS6 proteins in mammalian cells and confirm our yeast two-hybrid analysis identifying the N-terminal region of the GGL domain as the domain mediating this interaction. The lack of interaction of the RGS6L deletion mutant with DMAP1 further excludes the N-terminal region of RGS6L as well as sequences outside of the deleted region, including the RGD, as being involved in this interaction. Most interesting, the slight reduction in efficiency of co-precipitation of DMAP1 by RGS6(-GGL) splice forms observed here suggests that the 8 amino acids of the DMAP1-interacting region lacking in these proteins are required for full binding of DMAP1, consistent with our yeast two-hybrid analyses of these sequences (Fig. 1).
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258-293) that does not interact with DMAP1. Co-immunoprecipitation of Dnmt1 by RGS6L or the RGS6L mutant was examined by subjecting cell lysates to immunoprecipitation with anti-GFP antibodies followed by immunoblotting with anti-GFP or anti-polyhistidine. The lower panel of Fig. 2 shows the results of these experiments. As shown, Dnmt1 efficiently co-precipitated with RGS6L only in lysates of cells co-expressing DMAP1. However, no co-precipitation of Dnmt1 was observed with the RGS6L mutant lacking the DMAP1 interaction site, irrespective of the presence or absence of co-expressed DMAP1. These results demonstrate that RGS6L interacts with Dnmt1 in a DMAP1-dependent fashion and suggest that RGS6L and Dnmt1 interaction with DMAP1 is not mutually exclusive.
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5 and DMAP1 Interactions with RGS6 Are Not Mutually ExclusiveOur findings suggest different specificity requirements for DMAP1 and G
5 binding to the GGL domain of RGS6. The present results show that DMAP1 interaction with RGS6 requires sequences in the N-terminal region of the GGL domain and that this interaction occurs with -GGL splice forms of RGS6. Our previous study showed that -GGL splice forms of RGS6 do not interact with G
5 (15). However, the finding that these two proteins bind to different regions of the GGL domain does not rule out their mutually exclusive binding. Therefore, we examined the ability of various RGS6 splice forms to co-precipitate co-expressed DMAP1 and G
5. Fig. 3 shows the results of these studies. As shown, G
5 efficiently co-precipitated with RGS6L and RGS6S but not their -GGL splice forms, whereas DMAP1 co-precipitated efficiently with all RGS6 splice forms. Thus, G
5 and DMAP1 exhibit the same patterns of interaction with RGS6 when expressed individually or together, demonstrating that their interactions with the GGL domain of RGS6 are not mutually exclusive.
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RGS6L and DMAP1 Interaction in Mouse BrainPreviously we showed that our antibody to RGS6L detected native RGS6 in mouse brain by immunoblotting and immunohistochemistry (15). Although ectopically expressed RGS6L is primarily a cytoplasmic protein, we demonstrated its nuclear localization in response to heat or proteotoxic stress and during co-expression with G
5, and interestingly, we found evidence of some nuclearly localized RGS6L immunoreactivity in mouse brain (15, 16). Therefore, we undertook studies to see whether we could identify native DMAP1 in naive mouse brain and whether it showed any association with RGS6L. The upper panel of Fig. 4B shows the presence of DMAP1 immunoreactivity in mouse brain, and the lower panel shows that DMAP1 co-precipitated with RGS6L using anti-RGS6L agarose. These results provide the first evidence for interaction of endogenous RGS6L and DMAP1 in a naive tissue.
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5 with RGS6 proteins promoted RGS6 transport to the nucleus (15). Thus, RGS6 splice forms are localized in the nucleus, in a position to interact with DMAP1-Dnmt1 complexes, constitutively or in response to stress signaling or protein interactions.
In view of our evidence demonstrating high affinity interactions between RGS6 proteins and DMAP1 in both yeast and mammalian cells, we performed experiments to see whether we could detect any evidence of co-localization of RGS6 and DMAP1. Therefore, we examined the subcellular localization patterns of RGS6L and RGS6S, and their -GGL splice forms, and the RGS6L deletion mutant (RGS6L
258-293) that does not interact with DMAP1 during their individual and/or combined expression with DMAP1 in COS-7 cells. The subcellular patterns of distribution of individually expressed GFP-tagged forms of RGS6L, RGS6L(-GGL), and DMAP1 and of co-expressed GFP-tagged forms of RGS6 and FLAG-DMAP1 are shown in Fig. 5, A and B, respectively. When expressed alone, DMAP1 is localized in the nucleus, and RGS6L and RGS6L(-GGL) are localized in the cytoplasm (Fig. 5A). Co-expression of these RGS6L splice forms with DMAP1 resulted in co-localization of these proteins in the nucleus (RGS6L) or nucleoli (RGS6L(-GGL)). Thus, co-expression of DMAP1 with RGS6L splice forms promotes migration of RGS6L proteins from the cytoplasm to the nucleus or nucleoli and their co-localization with DMAP1 at these sites. In contrast, the RGS6L deletion mutant RGS6L
258-293 lacking the DMAP1-interacting domain did not undergo nuclear migration from the cytoplasm or co-localize with DMAP1 during its co-expression with DMAP1. DMAP1 was co-localized also with both forms of RGS6S during their combined expression. These results show that RGS6 proteins exhibit co-localization with DMAP1 during their expression in mammalian cells, in keeping with our evidence for direct interactions between these proteins. Moreover, the observed lack of nuclear migration of RGS6L
258-293 or its co-localization with DMAP1 shows that DMAP1 interaction with the N-terminal region of the GGL domain of RGS6 is required for its co-localization with RGS6. This latter finding confirms our yeast two-hybrid analysis and co-precipitation analysis in COS-7 cells, identifying this sequence module of RGS6 as the DMAP1-interacting domain, and shows the importance of this region in the interaction of these proteins in the context of a whole cell.
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75% when targeted to the promoter site of this construct. Co-transfection of cells with RGS6S or RGS6S(-GGL) inhibited transcriptional repression by DMAP1 on the TK promoter in a manner dependent upon the RGS6S cDNA transfected into cells. The transcriptional repressor activity of DMAP1 was unaffected by co-transfection with EGFP. These results demonstrate that RGS6S and RGS6S(-GGL), two proteins shown to interact with and co-localize with DMAP1, negatively modulate the transcriptional repressor activity of DMAP1. Interestingly, we routinely observed that RGS6S is slightly more potent than RGS6S(-GGL) in inhibiting the transcriptional repressor activity of DMAP1, possibly reflecting its stronger interaction with DMAP1 (Figs. 1 and 2).
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| DISCUSSION |
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5 binding, and co-precipitation experiments revealed that DMAP1 and G
5 binding to RGS6 is not mutually exclusive. We showed that co-expression of DMAP1 with RGS6L proteins promoted trafficking of RGS6L proteins from the cytoplasm to the nucleus or nucleoli and co-localization with DMAP1 at these sites, a response that was not observed with a deletion mutant of RGS6L lacking the DMAP1-interaction site. Although less dramatic, due to their usual localization in the nucleus, RGS6S splice forms and DMAP1 also exhibited co-localization in cells. Particularly noteworthy is our finding that RGS6 inhibited the functional activity of DMAP1 as a transcriptional repressor. These findings show that the interaction between RGS6 and DMAP1 is functionally relevant and provide new evidence for transcriptional regulatory effects of RGS6 proteins on the DMAP1-Dnmt1 complex. RGS6 is the first RGS protein shown to interact with proteins involved in transcriptional regulation. In 2000, we speculated that some RGS proteins might have a role in the nucleus distinct from their G protein regulatory actions when we reported that some RGS proteins are nuclear proteins or nucleocytoplasmic shuttle proteins (8). Subsequently, we reported that a splice form of RGS12 was a nuclear matrix protein that inhibited DNA and nascent RNA synthesis upon its expression in cells and possessed direct transcriptional inhibitory activity when targeted to a minimal TATA promoter (13, 14). Our recent findings that some splice forms of RGS6 are nuclear proteins (15) and that both nuclear and cytoplasmic splice forms of RGS6 undergo trafficking to the nucleus and nucleolus in response to stress signaling (16) raised the possibility that RGS6 may have G protein-independent functions in the nucleus. Indeed, G proteins are not believed to be present in the nucleus, and the present results demonstrate that interaction of RGS6 proteins with DMAP1 does not require its G protein-interacting RGS domain. Our results show clearly that interaction of RGS6 with DMAP1 requires a small N-terminal region of its GGL domain, although it remains a possibility that other structural regions, including the RGS domain, are involved in its ability to inhibit DMAP1-mediated transcriptional repression.
The present findings define a new structural motif within the GGL domain of RGS6 that mediates its high affinity interaction with DMAP1. The GGL domain was identified originally as a G
5-interacting domain, and amino acids in the C-terminal region of the GGL domain (Asp-297 and Trp-309) are required for its binding to G
5 (22, 23). Our findings indicate that that the region of the GGL domain required for binding to DMAP1 is distinct from that required for binding to G
5. First, the DMAP1-interacting region requires a sequence module in the extreme N-terminal region of the GGL domain (258-293) and not C-terminal sequences involved in G
5 binding. Second, we found that -GGL splice forms of RGS6 interact with DMAP1, although our previous and present studies showed that these proteins do not interact with G
5 (15). RGS6(-GGL) splice forms lack all GGL domain sequences C-terminal to amino acid 284. As noted earlier, we did observe that -GGL splice forms of RGS6 interact slightly less well than their GGL-containing counterparts, indicating that the 8 C-terminal amino acids in the DMAP1-interacting domain (258-293) play some role in this interaction. Finally, we showed that DMAP1 and G
5 do not compete for binding to RGS6, suggesting distinct binding sites for these proteins within the GGL domain of RGS6 and the lack of steric hindrance for each other's binding to these sites. It is noteworthy that the region of the GGL domain identified here to represent the DMAP1-interacting domain has predicted secondary structural elements that include a coiled coil region (257-275), an
helix (257-279), and part of a second
helix (281-297), whereas regions C-terminal to these sequences lack such secondary structure (23). It is interesting to speculate that these structural features, particularly the coiled coil region, provide the underlying basis for interaction of this sequence module with the coiled coil region of DMAP1 shown here to interact with RGS6.
Recently we showed the presence of both cytoplasmic and nuclearly localized RGS6L immunoreactivity in mouse brain (15). We hypothesized that these patterns of localization could represent free RGS6L (cytoplasmic) and RGS6L complexed with G
5 (nuclear), based upon our finding that G
5 expression promoted nuclear localization of RGS6L. Our present findings raise the possibility that DMAP1 might also play a role in the nuclear localization of RGS6L.
The precise role of DMAP1 in regulation of gene expression in mammalian cells is not yet known. However, the finding that it possesses transcriptional repressor activity and forms a complex with the multifunctional protein Dnmt1 suggests it may have important roles in gene regulation on its own or by virtue of association with Dnmt1. Indeed, the present study provides evidence that DMAP1 and Dnmt1 exist as a constitutive native complex in neuroblastoma cells. Dnmt1 is an essential DNA methyltransferase involved in maintaining the hemimethylated state of newly synthesized DNA at replication foci and in inheritance of DNA methylation patterns (17, 18, 24). In addition, Dnmt1 has intrinsic transcriptional repressor activity and recruits transcriptional co-repressor proteins, like DMAP1 (17, 19, 25). The N-terminal domain of Dnmt1 interacts with DMAP1, proliferating cell nuclear antigen, HDAC1/2, Rb, and several methyl-CpG-binding proteins (17, 19, 25). Dnmt1 functions as a co-repressor of Rb on E2F-driven gene transcription independently of its methyltransferase activity (19). The Dnmt1-DMAP1 complex is proposed to be involved in maintaining sparse methylation and transient gene silencing at early S phase and tight transcriptional repression of heterochromatin replicated in late S phase (17). Both genome-wide hypomethylation and region-specific hypermethylation (of CpG islands in promoters) are important in the formation and development of cancers (21). DNA hypermethylation, which often produces gene silencing, is associated with inactivation of many pathways involved in the cancer process, such as DNA repair, cell cycle regulation, and apoptosis (26). Promoter hypermethylation is found in essentially all human neoplasms and is the most characterized epigenetic change occurring in tumors. Dnmt1 is both necessary and sufficient to maintain aberrant CpG island methylation in human cancer cells, and overexpression of Dnmt1 in cells can promote cellular transformation (27, 28). Global hypomethylation induces chromosomal instability, loss of imprinting, and activation of intragenomic elements that may disrupt normal genes. Therefore, it is particularly noteworthy that mice harboring a hypomorphic allele of Dnmt1 alone or in a background of mutant p53 and Nf1 genes exhibit genomic DNA hypomethylation that promotes tumorigenesis (29, 30). How DMAP1 affects this role of Dnmt1 in maintaining normal versus cancerous cell phenotypes is not yet clear.
The present results provide new evidence linking RGS proteins to proteins involved in gene regulation. The finding that RGS6 forms high affinity complex with and functionally regulates DMAP1 suggests that this protein might be under regulatory control by RGS6. The ability of RGS6 to interact indirectly with Dnmt1 also raises intriguing questions regarding its functional role in the multifunctional activities of this important gene regulatory protein. The results presented here, including identification of the DMAP1-binding domain in RGS6, will facilitate studies to unravel the role of members of the RGS6 protein family in nuclear function.
| FOOTNOTES |
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To whom correspondence should be addressed: Dept. of Pharmacology, University of Iowa College of Medicine, Iowa City, IA 52242. Tel.: 319-335-8330; Fax: 319-335-8930; E-mail: rory-fisher{at}uiowa.edu.
1 The abbreviations used are: RGS, regulators of G protein signaling; DEP, disheveled, Egl-10, pleckstrin homology; DBD, DNA binding domain; DMAP1, Dnmt1-associated protein; Dnmt1, DNA methyltransferase 1; DPBS, Dulbecco's phosphate-buffered saline; GFP, green fluorescent protein; EGFP, enhanced GFP; G
, subunit of G protein; G
,
subunit of protein; G
, G protein
subunit; G protein, guanine nucleotide-binding protein; GGL, G
subunit-like domain; HDAC, histone deacetylase; TSG101, tumor susceptibility gene 101; Rb, retinoblastoma protein; RGD, RGS domain; RGS6L, long form of RGS6; RGS6S, short form of RGS6; RGS6L(-GGL), RGS6L lacking complete GGL domain; RGS6S(-GGL), RGS6S lacking complete GGL domain; TK, thymidine kinase; Ni-NTA, nickel-nitrilotriacetic acid. ![]()
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