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J. Biol. Chem., Vol. 279, Issue 29, 30210-30218, July 16, 2004
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From the
Laboratoire de Biologie et Biochimie Cellulaire du Vieillissement, EA 3106, IFR 117, Université Paris 7, Denis Diderot, 2 place Jussieu, Paris 75005, the ¶Unité de Biochimie des Interactions Macromoléculaires, CNRS URA 2185, Département de Biologie Structurale et Chimie, Institut Pasteur, 28 rue du Dr. Roux, Paris 75015, and the ||Laboratoire de Neurobiologie et Diversité Cellulaire, CNRS UMR 7637, Ecole Supérieure de Physique et Chimie Industrielles, 10 rue Vauquelin, Paris 75005, France
Received for publication, January 20, 2004 , and in revised form, May 17, 2004.
| ABSTRACT |
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| INTRODUCTION |
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1-antitrypsin inhibitor and calmodulin (CaM)1 (1, 2). CaM is a key calcium sensor protein implicated, in eukaryotic cells, in many regulatory pathways (3). This protein, 148 residues long, is composed of two globular domains linked by a central flexible
-helix. Each globular domain contains two helix-loop-helix motifs, named EF-hands, that bind calcium ions. Upon calcium binding, CaM undergoes major conformational changes that permit its specific interaction with protein targets such as protein kinases, protein phosphatases, phosphodiesterases, ions channels, among others. Due to their side-chain flexibility and hydrophobicity, methionine residues play a crucial role in the CaM/protein effector recognition, and these interactions can be sensitive to methionine oxidation.
Oxidation of the two methionine residues at positions 144 and 145 was shown to abolish calcium-binding. Oxidized CaM is unable to interact properly with and activate the plasma membrane Ca2+-ATPase (4). Similarly oxidized CaM exhibits a reduced affinity for nitric-oxide synthases (5). Biophysical studies indicated that the helical-content of CaM decreases upon methionine oxidation, an effect that is accentuated in the absence of calcium (6). Therefore, calmodulin function can be modulated by the redox status of its methionine residues.
Oxidized protein build-up is a hallmark of aging and neurodegenerative diseases. In particular, oxidized CaM has been detected in aged bovine brain (7). Accumulation of oxidized proteins is generally prevented either by their disposal by proteasome-dependent degradation (8) or by selective repair achieved by dedicated enzymatic systems. Oxidation of methionine residues leads to both S and R diastereoisomers of methionine sulfoxide (MetO) that can be reduced specifically by the peptide methionine sulfoxide reductases A and B enzymes (MsrA and MsrB), respectively (914). This ubiquitous enzymatic repair system is essential to maintain the pool of native proteins. It has also been proposed to play an important role as an antioxidant system by reducing exposed oxidized methionines on the protein surface. In addition to its repair and antioxidant roles, a regulatory function has been attributed to MsrA, because reduction of oxidized CaM by MsrA can partially restore its ability to activate the plasma membrane Ca2+-ATPase (15). Similarly, transient inactivation of the voltage-dependent potassium channel was shown to be modulated by methionine oxidation and reversed upon reduction by MsrA or MsrB (14, 16).
In this study, we have examined the role of methionine redox status in the interaction between mammalian CaM and the adenylate cyclase (AC) toxin from Bordetella pertussis, the causative agent of whooping cough (17, 18). AC is one of the major virulence factors of this microorganism. This toxin is able to enter into eukaryotic target cells where it is activated by the endogenous CaM (19) and synthesizes supraphysiological levels of cAMP (20). Previous studies identified the CaM-dependent catalytic domain within the 400 N-terminal residues of the toxin (21, 22). More recently, it was shown that, in vivo, the AC toxin primarily targets phagocytic cells such as neutrophils and macrophages as a result of its specific binding to the CD11b/CD18 integrin (23). Because neutrophil priming and activation result in the production of reactive oxygen species, potential intracellular oxidation might have important physiological consequences for the CaM-AC interaction. In a pioneering work, Wolff et al. (19) indeed observed that oxidation of CaM abolishes activation of B. pertussis AC.
Here, we report that in vitro oxidation of all nine methionine residues of CaM dramatically reduced its affinity for AC. After treatment with either MsrA or MsrB, oxidized CaM was partially "repaired," exhibiting a maximum of seven reduced methionines out of a total of nine. This partially repaired CaM could nevertheless interact with AC almost as efficiently as the native protein as monitored by binding and activity assays. We further identified methionine residues 109, 124, and 145 as essential for binding to AC and activation of its enzymatic activity. The ability of AC to be fully activated by partially oxidized CaM molecules, as documented here, might contribute to the pathophysiological role of this toxin by allowing it to exert its cytotoxic effects in activated neutrophils.
| EXPERIMENTAL PROCEDURES |
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Plasmid pDLTCaM41 is a bacterial expression vector for human CaM. The CaM cDNA coding sequence was amplified by PCR from a human cDNA library (Stratagene) by using appropriate primers and subcloned between the NdeI and BamHI restriction sites of plasmid pTrec2 (25). In the recombinant plasmid pDLTCaM41, the CaM gene is expressed under the control of the
phage PR promoter. The plasmid also encodes the thermosensitive
repressor cI857 that strongly represses gene transcription at the
PR promoter at temperature below 32 °C. Expression of CaM is triggered by shifting cells to 37 °C or higher temperature.
Plasmid pTRAC384CS is an expression vector for AC384CS, a truncated form of AC encompassing residues 1384 of wild-type AC followed by a cysteine and a serine residues (native AC has no cysteine residue). Such a truncated form exhibited the same catalytic activity (specific activity of about 2000 units/mg) and affinity for CaM (half-maximal activation at a CaM concentration of 0.1 nM) as the 399 residues long catalytic domain (data not shown). Plasmid pTRAC384CS was constructed as follows. First, a DNA fragment coding for the AC catalytic domain was amplified by PCR from plasmid pDIA5240 (26) by using appropriate primers and subcloned between the NdeI and EcoRI sites of plasmid pTrec2. Then, the PstI site of the recombinant plasmid obtained, pTRAC1, was eliminated by PstI digestion, T4 polymerase treatment, and re-ligation. In the resulting plasmid, pTRAC
PstI, the 1.06-kb, SacII/EcoRI fragment was replaced by the corresponding DNA fragment from plasmid pACM384 (26) to yield plasmid pTRAC384. Finally, two complementary oligonucleotides, (5'-GCTAAG-3' and 5'-AATTCTTAGCTGCA-3') were hybridized and ligated into pTRAC384 digested with PstI and EcoRI. In the resulting plasmid pTRAC384CS, a Cys, Ser, and TAA stop codon were inserted immediately downstream to the Pro384 codon of AC. Similarly, two complementary oligonucleotides, 5'-CGAAGTTCTCGCCGGATGTACTGGAAACGGTGCCCGGGAAATAAG-3' and 5'-AATTCTTATTTCCCGGGCACCGTTTCCAGTACATCCGGCGAGAACTT-3', were hybridized and ligated into pTRAC-384CS digested with BstBI and EcoRI to construct plasmid pTRAC-384GK. The latter codes for the first 384 residues of the wild-type AC followed by a glycine and a lysine residues, designated below as AC. The specific activity of this AC polypeptide at saturating CaM concentration was about 2000 units/mg, and it was half-maximally activated by a CaM concentration of about 0.1 nM (see Fig. 6).
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CaM was purified from bacterial extracts of E. coli BLR harboring plasmid pDLTCaM41 grown in LB medium/ampicillin as described above. After sonication, the soluble extract was supplemented with ammonium sulfate to a final concentration of 50% (w/v) and agitated for 3060 min at 4 °C. After centrifugation (15 min, 13,000 x g, 4 °C), the supernatant was adjusted to pH 4.14.5 by addition of glacial acetic acid and agitated for 60 min at 4 °C. After centrifugation (15 min, 13,000 x g, 4 °C), the pelleted proteins were resuspended in 20 mM Hepes-Na, pH 7.5, 0.4 M NaCl, 5 mM CaCl2 and loaded onto a Phenyl-Sepharose (Amersham Biosciences) column equilibrated in the same buffer. After extensive washing with 20 mM Hepes-Na, pH 7.5, 1 mM CaCl2, the bound proteins were eluted with 20 mM Hepes-Na, pH 7.5, 3 mM EGTA. At this stage, CaM is usually more than 95% pure as judged by SDS-PAGE. In some cases, CaM was further purified by an additional stage of DEAE-Sepharose chromatography. CaM concentration was determined by measuring absorbance at 278 nm by using a molar extinction coefficient at 278 nm of 2,800 M1·cm1.
Expression and Purification of MsrA and MsrBRecombinant rat MsrA enzyme was expressed and purified from E. coli as previously described by Petropoulos et al. (28). A human cDNA sequence coding for MsrB originally named Cbs1 (11) was obtained from the clone image data base (www.ATCC.org). The msrB coding region was amplified by PCR using appropriate primers and subcloned into the pET15b plasmid between the restriction sites NdeI and BglII. The recombinant plasmid, pOTB7, was transformed into E. coli BL21(
DE3) (Novagen), and transformants were cultivated in LB medium containing 100 µg/ml ampicillin at 37 °C to an optical density at 600 nm of 0.8. Then, expression of MsrB was triggered by addition of 1 mM isopropyl-1-thio-
-D-galactopyranoside. After 3 h of additional growth at 37 °C, the bacteria were pelleted (5,000 x g, 10 min, 4 °C), resuspended in 20 mM Tris-HCl, pH 8, 0.7 M NaCl (buffer A) containing 20 mM imidazole, and disrupted by sonication. After centrifugation (20,000 x g, 20 min, 4 °C), the supernatant was loaded onto a His-Bind resin affinity chromatography column (Novagen) equilibrated in buffer A containing 20 mM imidazole, pH 8. After washing with buffer A containing 60 mM imidazole, pH 8, the His-tagged MsrB protein was eluted with buffer A containing 250 mM imidazole, pH 8. About 1 mg of His Tag-MsrB was usually obtained from 1 liter of culture.
In Vitro Methionine Oxidation of CaM and CaM·AC60 µM of purified CaM in 50 mM Mes, pH 5.15, 1 mM MgCl2, 100 mM KCl, was incubated during 23 h with 50 mM hydrogen peroxide. To stop the oxidation reaction, the sample was loaded onto a PD10 chromatography column (Amersham Biosciences) to exchange the buffer against 10 mM sodium phosphate, pH 7, 100 mM NaCl. Then, 20 µM of CaM with 30 µM of AC in a buffer A containing 20 mM Hepes, pH 7.4, 100 mM NaCl, 2 mM CaCl2 was incubated with 50 mM tert-butylhydroperoxide (tBHP) for 23 h at room temperature. The integrity of the complex was verified by 7.5% native PAGE.
Purification of the CaM·AC Complex and Separation of These Two ProteinsAfter the oxidation reaction, the sample containing the complex was loaded onto a Superdex 75 column (Amersham Biosciences) previously equilibrated in 20 mM Tris-HCl, pH 8, 0.1 M NaCl, and 2 mM CaCl2 (buffer B) flowing at a rate of 0.2 ml·min1. Three peaks were detected at 215 nm, and the corresponding fractions were collected. Peak 1 is composed of CaM·AC complexes, peak 2 corresponds to AC, and peak 3 is the oxidation reagent tBHP. 8 M urea was added to the CaM·AC sample to disrupt the interaction between CaM and AC. Then, CaM and AC were separated on an anionic resin of Vivapure Q chromatography column (Vivasciences) previously equilibrated in buffer B containing 8 M urea. AC was not retained and flowed through the column; CaM was eluted by addition of buffer A containing 0.5 M NaCl after washing with buffer B.
In Vitro Reduction of Methionine Sulfoxide by MsrA or/and MsrB60 µM oxidized CaM in 10 mM sodium phosphate, pH 7, 100 mM NaCl was incubated with 1 µM MsrA and/or 4 µM MsrB (MsrA enzyme is four times more efficient catalytically than MsrB) and 15 mM DTT (used as an electron donor to reduce MsrA or MsrB) for 2 h at 37 °C. The reduction efficiency was verified by SDS-PAGE and nanoESI-Q-TOF mass spectrometry.
Electrophoretic AnalysesThe oxidation state of CaM was analyzed by denaturing 15% SDS-PAGE (29). Association of CaM with AC was monitored by native gel electrophoresis carried out on 7.5% PAGE in Tris-glycine, pH 8.8. Both denaturing and native gels were stained with G-250 Coomassie Blue.
Proteins Analysis by NanoESI-Q-TOF Mass SpectrometryThe full-length proteins were desalted on a reverse phase C4 ZipTipTM (Millipore). The samples were analyzed in acetonitrile/0.2% aqueous formic acid 1:1 (v/v) by nanoelectrospray (nanoESI) mass spectrometry with a hybrid nanoESI-Q-TOF mass spectrometer (Q-TOF2, Micromass). Direct infusion of the sample was realized with metallized glass needles (medium size, Protana, MDS Sciex) through a Z-SprayTM source (Waters). Mass data were processed using the Masslynx software (Waters) to calculate the molecular mass of each protein and to deconvolute the spectra.
CaM Digestion by Trypsin, Ion Trap, and MALDI-TOF MS AnalysesNative, oxidized, or repaired CaM (1 µg) were digested with 1:40 (w/w) trypsin during 18 h at 37 °Cin0.1 M Tris-HCl, pH 8.5. The digests were desalted on a C18 ZipTipTM (Millipore).
Liquid chromatography-tandem MS (LC-MS/MS) analyses were performed with an electrospray ion-trap mass spectrometer (LCQ Advantage; ThermoElectron) coupled on-line with a Surveyor high performance liquid chromatography system (ThermoElectron). A 150- x 0.18-mm ThermoElectron HyPURITY C18 column (5-µm particle diameter; 190-Å pore size) with a mobile phase of solvent A (0.1% (v/v) formic acid in water) and solvent B (0.1% (v/v) formic acid in 80% (v/v) acetonitrile) was used with a linear gradient of 2 to 60% of mobile phase B over 60 min at a flow rate of 250 µl/min. The flow was split, and 2 µl/min was directed to the column. The electrospray needle was operated with a voltage of 2.5 kV, and the heated desolvation capillary was held at 180 °C. Nitrogen was used as the sheath gas. All scans were acquired in positive ion mode. The mass spectrometer operated in a data-dependent MS/MS mode. The top three most intense ions were selected from the full MS scan (m/z range 3002000) for MS/MS analysis. The isolation width of the parent ions was set to 2 m/z units with 35% normalized collision energy. An m/z ratio for an ion that had been selected for fragmentation was placed in a list and dynamically excluded from further fragmentation for 1 min. Proteins were identified automatically by the computer program TurboSEQUEST (ThermoElectron).
Aliquots of 0.5 µl of each digest in aqueous acidic solution were spotted and mixed on the stainless steel target with 0.5 µl of the supernatant of a saturated solution of 2,5-dihydroxybenzoic acid in ethanol/0.1% aqueous trifluoroacetic acid 1:9 (v/v). Matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectra were obtained using a DE-STR Voyager mass spectrometer (Applied Biosystems). Analyses were realized in reflectron-positive mode with an accelerating voltage of 20 kV, a delayed extraction time of 210 ns, and an average of 200 laser pulses for each acquisition on the mass range 6005,000 Da. MALDI-TOF spectra were processed using Data Explorer software (Applied Biosystems) and m/z-Knexus edition freeware (Proteometrics, Genomic Solutions Inc.). The calibration was first performed in external mode using a standard peptides mix.
CaM tryptic digest was also analyzed by nanoscale capillary liquid chromatography-tandem mass spectrometry (LC-MS/MS) using 2.5 µl (2 µg) of the digest diluted in 6 µl of buffer A (H2O/acetonitrile/formic acid, 96/4/0.1, v/v). A capillary LC system (Famos-Switchos-UltiMate Dionex, LC Packings, Amsterdam, Netherlands) was used online with a hybrid nanoESI-Q-TOF mass spectrometer (Q-TOF2, Waters, Micromass, Manchester, UK). Chromatographic separations were conducted on a reverse-phase capillary column (Pepmap C18, 75 µm inner diameter, 15-cm length, LC Packings) with a 200-nl/min flow. The gradient profile used consisted of a linear gradient from 100% A to 45% B (H2O/acetonitrile/formic acid, 10/90/0.085, v/v) in 60 min, followed by a linear gradient to 100% B over 15 min. Data acquisition was realized in automatic mode switching between the survey acquisition in MS mode and fragmentation acquisition in MS/MS mode on the four most intense ions detected in the former survey scan. Mass data collected during an LC-MS/MS analysis were processed and converted into a pkl file using the MasslynxTM software (Micromass) to be submitted to the search software Mascot (www.matrixscience.com/). Peptide identifications were obtained by comparison of experimental data to the NCBInr mammalian data base, allowing carbamidomethylation of cysteines and oxidation of methionines as partial modification without any restriction on taxonomy. The unidentified species that have undergone fragmentation were subsequently checked manually from the raw data.
Site-specific Biotinylation of AC384CSPurified AC384CS was biotinylated on its unique cysteine residue (native AC has no cysteine residue) by incubating the protein in 8 M urea, 20 mM Hepes-Na, pH 7.5, with biotin-maleimide (Molecular Probes) for 2 h at room temperature. The reaction was quenched with 10 mM DTT, and the mixture was diluted five times before loading on a small CaM-Sepharose (Sigma) column. After an extensive wash in coupling buffer, the biotinylated AC384CS was eluted in 8 M urea, 20 mM Hepes-Na, pH 7.5 and kept at 20 °C. Mass-spectrometry analysis confirmed that a single biotin-maleimide molecule had been incorporated on AC384CS. The selectivity of the labeling on cysteine 385 of AC384CS was strongly supported by the observation that purified AC, lacking cysteine residues, was not biotinylated when incubated in the same conditions with biotin-maleimide.
CaM Binding Assays by Competitive Enzyme-linked Immunosorbent Assay96-well microtiter plates were coated with 50 µlof5 µg/ml CaM in 0.05 M carbonate buffer, pH 9.8, and incubated overnight at 4 °C. All further incubations were performed at room temperature. Wells were washed three times in HBST buffer (20 mM Hepes-Na, pH 7.5, 150 mM NaCl, 1 mM CaCl2, 0.1% Tween 20 (v/v)). 300 µl of blocking buffer (5 mg/ml bovine serum albumin in HBST buffer) was added to each well, and the plates were incubated for 12 h. Wells were washed as before, and 40 µl of serial dilutions of native, oxidized, or repaired CaM in HBST buffer was added in each well, followed by the addition of 10 µl of 0.4 nM biotinylated AC384CS in HBST buffer. After 3 h of incubation at 30 °C, wells were washed three times with HBST buffer, and 50 µlof extravidin-alkaline phosphatase conjugate (Sigma, 1:6000 dilution in HBST buffer) was added. After 1-h incubation at 30 °C, the wells were washed as before, and 50 µl of substrate solution (1 mg/ml p-nitrophenyl phosphate in 50 mM Tris-HCl, pH 9.5, 5 mM MgCl2) was added per well. Plates were incubated at room temperature until a yellow color developed, usually between 15 min and 2 h. Absorbance readings at 405 nm were recorded using a Tecan microplate reader.
Surface Plasmon Resonance RecordingBinding experiments were performed on a BIAcore biosensor 2000 system (Biacore AB). All experiments were performed at 25 °C, at a flow rate of 5 µl/min using a running buffer containing 20 mM Hepes-Na, pH 7.5, 1 mM CaCl2 and 0.005% Tween 20 (v/v). Between binding cycles the coated surfaces were regenerated by injection of 10 µl of 20 mM NaOH, followed by injection of 10 µl of 20 mM HCl. The first flow channel of the sensor chip did not contain any immobilized ligand and served as a reference surface.
In preliminary experiments, we attempted to immobilize AC by direct coupling to a 1-ethyl-3-[3-dimethylaminopropyl]carbodiimide-activated sensorchip. However, we repeatedly observed irreversible losses of signal upon regeneration of the matrix. This prompted us to immobilize AC through a biotin tag onto a streptavidin-coated sensorchip (Sensorchip SA, BIAcore). Biotinylated AC was immobilized (up to 2500 relative units) by injection of 20 µl of 100 nM AC384CS-biotin in 20 mM Hepes-Na, pH 7.5, 1 mM CaCl2 over an SA-coupled sensorchip (BIA-core), and CaM oxiforms were used as analytes. The sensorgrams were analyzed using the BIAevaluation 3.1 software (BIAcore).
Fluorescence SpectroscopyFluorescence measurements were recorded on a PerkinElmer Life Sciences LS-5B luminescence spectrometer thermostated at 25 °C, using a 0.5x 1 UV-grade quartz cuvette (sample volume of 1 ml). Emission spectra (
exc = 295 nm) of AC (1 µM in 20 mM Hepes-Na, pH 7.5, 1 mM CaCl2) were recorded from 310 to 410 nM (both excitation and emission bandwidths were set at 5 nm) at 60 nm/min. Native CaM or oxidized CaM added to the sample were diluted from stock solutions (in 20 mM Hepes-Na, pH 7.5) of 180 µM. All spectra were corrected from background fluorescence.
CaM Activation of AC Enzymatic ActivityAdenylate cyclase activity was measured as previously described (30). AC was diluted to 0.1 nM in 45 µl of reaction mixture containing 50 mM Tris-HCl, pH 8, 6 mM MgCl2, 0.1 mM CaCl2, 0.1 mM [3H]cAMP (6000 cpm/assay) and various concentrations of CaM or CaM oxiforms. Reaction was initiated by addition of 5 µl of 20 mM [
-33P]ATP (15 x 105 cpm/assay). After 10 min of incubation at 30 °C, the reaction was stopped by addition of 100 µl of 0.5 N HCl. After neutralization with 100 µl of 0.5 N NaOH, the mixture was applied on an Al2O3 column to separate [33P]cAMP (recovered in the eluate) from [
-33P]ATP (retained on the column). One unit of AC activity corresponds to 1 µmol of cAMP formed per minute at 30 °C and pH 8. A maximal specific activity of about 2000 units/mg of AC (or AC384CS) was measured in the presence of 2 µM native CaM.
| RESULTS |
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In Vitro Oxidation of Calmodulin Methionines Drastically Reduces Its Affinity for Adenylate CyclaseRecombinant CaM was overproduced in E. coli and purified by hydrophobic chromatography to homogeneity as shown by SDS-PAGE (Fig. 1, lane 1). MS analysis confirmed the homogeneity of the sample: the mass spectrum showed a single peak of 16,709 Da corresponding to the native form (Fig. 2A) with nine fully reduced methionine residues. When the CaM methionines were specifically oxidized in vitro in the presence of hydrogen peroxide at pH 5, the oxidized protein appeared by MS analysis (Fig. 2B), as a major peak with a molecular mass of 16,853 Da. The molecular mass increase (+144 Da) corresponds precisely to the addition of one oxygen atom to each of the nine methionine residues upon conversion of methionine to MetO. As shown in Figs. 1 and 3 (lanes 2), the oxidized CaM (CaMox) migrated slightly differently as compared with the native CaM both on native and denaturing electrophoreses, most likely as a consequence of protein conformational alterations.
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Altogether, these data indicate that the redox state of CaM methionine residues has a critical role for CaM binding to AC as the oxidation of methionine residues dramatically reduced the affinity of CaM for AC. Importantly, this implies that, under physiological concentrations of CaM, the fully oxidized CaM would be unable to activate significantly the enzymatic activity of the AC toxin.
The Peptide Methionine Sulfoxide Reductase System Restores Functional Interaction of CaMox to ACWe then studied the effect of the peptide methionine sulfoxide reductases, MsrA and MsrB, on the reduction of oxidized CaM. CaMox was incubated with either MsrA or MsrB, expressed and purified from E. coli (see "Experimental Procedures"), using DTT as an electron donor in the reduction process. Reduction of CaMox upon incubation with MsrA (CaM/MsrA) or MsrB (CaM/MsrB) could be clearly evidenced by SDS-PAGE analysis (Fig. 1): the repaired CaM migrated as several distinct bands exhibiting different electrophoretic mobilities, intermediate between that of native CaM and that of oxidized CaM. These different species/bands most likely correspond to partially and heterogeneously reduced CaM molecules, having various combinations of oxidized and reduced methionines, with different conformations and/or affinities for calcium. Partial reduction of MetO residues of CaM exposed to either MsrA or MsrB was indeed confirmed by mass spectrometry that revealed, in both cases, a heterogeneous population with a maximum of seven reduced methionines (Fig. 2, C and D). This result could be easily explained by the fact that, upon oxidation, methionine residues of CaM should be randomly converted to either the S or the R diastereoisomer of MetO, and, in each case, only the specific diastereoisomer could be reduced in the presence of only one form of the enzymes, MsrA or MsrB.
The ability of these heterogeneous populations of CaM to associate with AC was analyzed by native gel electrophoresis, which revealed that CaM/MsrA and CaM/MsrB can form a stable complex with AC (Fig. 3, lanes 5 and 6). BIAcore analysis also demonstrated that CaM/MsrA and CaM/MsrB could bind specifically to AC-biotin immobilized on sensorchip (data not shown). Competition assays (Fig. 4) indicated a slightly lower affinity of the partially reduced forms of CaM for AC-biotin, as compared with that of the native activator (K0.5 of 10 and 8 nM for CaM/MsrA and CaM/MsrB, respectively, versus a K0.5 of 1.8 nM for CaMN). AC activation assays confirmed a 4- to 5-fold decrease in the apparent affinity of CaM/MsrA and CaM/MsrB for AC, as compared with that of the native CaM. It is noteworthy that both partially reduced CaM/MsrA and CaM/MsrB species, at saturating concentration (i.e. > 100 nM), activated AC to an identical specific activity as the wild-type CaM (i.e. about 2000 µmol of cAMP·min1·mg1).
Altogether these results indicated that incomplete reduction of oxidized CaM by either MsrA or MsrB was sufficient to almost fully restore AC activation with only a slight decrease of the apparent affinity. Importantly, the fact that the partially reduced forms, CaM/MsrA or CaM/MsrB, exhibited affinities for AC and activation properties close to that of native CaM, although they still contained numerous oxidized methionine residues, suggest that only few of the CaM methionine residues are critical to establish functional interaction with AC.
Complete reduction of methionine residues of oxidized CaM was achieved upon incubation in the presence of both MsrA and MsrB: the resulting CaM/MsrA + MsrB migrated like the native CaM on SDS-PAGE (Fig. 1). It suggests that all nine MetO had been reduced, and indeed a single species with a molecular mass of 16,709 Da corresponding to the native CaM (Fig. 2E) was detected by mass spectrometry. AC binding to CaM/MsrA + MsrB was enhanced as compared with CaM/MsrA or CaM/MsrB, although it did not fully recover the potency of native untreated CaM (Figs. 4 and 5). This might be a consequence of the different treatments to which the polypeptides have been subjected.
The C-terminal Methionine Residues of CaM Are Essential for the Interaction with ACWe then attempted to identify the specific methionine residues of CaM that are essential for interaction with AC. CaM was completely oxidized by hydrogen peroxide and then partially reduced by treatment with MsrA alone, as described above. This heterogeneous population of CaM with mixed oxidized/reduced methionines was then chromatographed onto AC covalently bound to a Sepharose resin, to separate CaM molecules competent for AC binding from those unable to do so. Unbound CaM molecules were collected and, after washing, the bound CaM was eluted from AC-Sepharose resin in denaturing conditions (8 M urea in Hepes buffer). Both unbound and bound fractions were then digested by trypsin and analyzed by MALDI-TOF to identify, among the nine methionine residues, those that are important for the interaction with AC. As shown in Table I, the methionine residues located in the N terminus moiety of CaM (i.e. Met-36, Met-51, Met-72, Met-73, and Met-77) were found to be either reduced or oxidized, in both the unbound and bound fractions. That methionine sulfoxides were found in each N terminus peptide derived from the bound fraction, strongly suggested that the oxidation of the corresponding residues did not prevent CaM-AC binding. On the other hand, methionine residues in the C terminus part of CaM were found mostly oxidized in the unbound fraction (Table I), suggesting that the oxidized state of these methionine residues (i.e. Met-109, Met-124, Met-144, and Met-145) might have prevented the association of CaM with AC. Unfortunately, the peptides corresponding to the C-terminal part of CaM in the bound fraction were not detected by mass spectrometry.
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| DISCUSSION |
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Complete reduction of all methionine sulfoxide residues of the oxidized CaM could be achieved in the presence of both MsrA and MsrB enzymes, as shown by mass spectrometry study of the repaired protein (Fig. 2E). The full reduction of oxidized CaM restored a native-like conformation, as indicated by both native and denaturing gel electrophoresis analyses (Figs. 1 and 3). Yet, the affinity for AC of this fully repaired CaM was still slightly lower than that of untreated CaM. The fact that the heterogenous population of partially oxidized CaM obtained in the presence of MsrA or MsrB could fully activate AC with a minor decrease in apparent affinity, as compared with the native activator, suggests that only a small number of the methionine residues have to be in a reduced form to allow functional interaction of CaM with AC.
We took advantage of this heterogeneous population of CaM molecules, obtained after partial reduction with MsrA, to identify the methionine residues that might be critical for interaction with AC. An AC-affinity chromatography was used to separate CaM molecules able to bind AC from those that could not. Mass spectrometry analysis revealed that, in CaM molecules unable to interact with the immobilized AC, the methionine residues from the C-terminal domain were all oxidized. This suggests that the oxidized state of these residues (i.e. Met-109, Met-124, Met-144, and Met-145) prevented CaM binding to AC. These data were confirmed by a different experimental approach in which we identified the methionine residues of CaM that became protected from oxidation when associated to the AC target. The CaM·AC complex was found to be resistant to oxidation when exposed to tert-butylhydroperoxide. Mass spectrometry analysis revealed that methionines 36, 51, 71, 72, 76, and 144 of CaM were mainly oxidized showing that (i) these Met residues were accessible to oxidation within the complex and (ii) methionine sulfoxide at these positions did not disrupt the AC-CaM interaction. In contrast, Met-109, Met-124, and Met-145 of CaM were found only in their reduced state, indicating that they were preserved from oxidation within the AC·CaM complex.
Taken together with the observation that complete oxidation of CaM methionine residues drastically reduced the affinity of this activator for AC, these data strongly suggest that methionines at positions 109, 124, and 145 are involved in the formation of a high affinity complex with AC. These results highlight the essential role of the C-terminal moiety of CaM in the binding to and activation of AC, in good agreement with those obtained by Wolff et al. (33) who showed that the C-terminal half of CaM was able to activate AC as efficiently as full-length protein with only a 10-fold decrease in affinity. More recently, Shen et al. (34) confirmed that the C-terminal domain of CaM could activate AC, but at variance with Wolff et al. (33), they found that the N-terminal moiety of CaM also exhibited a potent AC activating capability. Yet, our data indicated that, when native CaM is complexed to AC, the methionine residues from the C-terminal part are preferentially protected from oxidation as compared with those from the N-terminal half. This suggests that the C-terminal domain contributes the main interface with AC while the N terminus might be more exposed. Shen et al. (34) also reported that modification of the C-terminal CaM moiety, by engineering an intramolecular disulfide bond, affected more dramatically its interaction with AC than the corresponding modification within the N-terminal part.
The role of individual methionine in the functional interaction of CaM with various target enzymes has been examined in several recent studies. The Squier group previously showed that oxidation of CaM resulted in an inability to fully activate the plasma membrane Ca2+-ATPase, and recently, Bartlett et al. (4) used a mutational approach to demonstrate that oxidation of Met-144 is largely responsible for the decreased extent of enzyme activation. The same methionine residues at positions 144 and 145 of CaM were also shown to contribute to the interaction with both neuronal nitric-oxide synthase (NOS) and endothelial NOS-constitutive isoforms of NOS, because their site-specific oxidation resulted in changes in affinity for these enzymes (5). Kondo et al. (35) also highlighted the critical role of the hydrophobic amino acid side chain at position 144 of CaM in NOS activation. Balog et al. (36) have studied the effect of CaM oxidation on the regulation of the skeletal muscle ryanodine receptor Ca2+ release channel (RyR1) and found that complete oxidation of CaM abolished its functional interaction with RyR1. By mutating individual CaM methionine residues to glutamine (a mutation that somewhat mimics the oxidation of methionine by introducing an oxygen atom at the same position in the side chain as the sulfoxide), they demonstrated that Met-109 and Met-124 were critical for functional interaction of CaM with the ryanodine receptor.
The fact that the B. pertussis AC is efficiently activated by partially oxidized CaM might have important implications for the biological function of this essential toxin. Indeed, the AC toxin, through its specific interaction with the CD11b/CD18 integrin, primarily targets phagocytic cells like neutrophils and macrophages (23, 32). Because neutrophil priming and activation result in the production of reactive oxygen species that may cause intracellular oxidation, the ability of AC to be fully activated by partially oxidized CaM molecules should allow the toxin to exert its pathophysiological effects in activated neutrophils. Moreover, our study has revealed that the methionine residues of CaM implicated in the recognition and activation of the AC toxin are essentially the same as those that are important for the regulation of some other mammalian enzymes. The oxidation state of these critical methionine residues should be under a tight control by the MsrA/MsrB enzymes, given the central role of CaM in cell function. The B. pertussis AC might have evolved to recognize the same structural features in CaM to be able to find a functional activator in the host cells it invades.
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Supported by fellowships from the French Ministère de l'Education Nationale, de la Recherche et de la Technologie and the Agence Nationale de Recherche sur le Sida (ANRS). ![]()
** To whom correspondence may be addressed. Tel./Fax: 33-1-44-27-82-34; E-mail: bfriguet{at}paris7.jussieu.fr. 
To whom correspondence may be addressed. Tel.: 33-1-45-68-84-00; Fax: 33-1-40-61-30-43; E-mail: ladant{at}pasteur.fr.
1 The abbreviations used are: CaM, calmodulin; MetO, methionine sulfoxide; AC, adenylate cyclase; MsrA, peptide methionine sulfoxide reductase A; MsrB, peptide methionine sulfoxide reductase B; CaMN, native CaM; CaMox, oxidized CaM; CaM/MsrA, oxidized calmodulin reduced with MsrA; CaM/MsrB, oxidized calmodulin reduced with MsrB; CaM/MsrA + MsrB, oxidized calmodulin reduced with MsrA and MsrB; MS, mass spectrometry; MALDI-TOF, matrix-assisted laser desorption/ionization time-of-flight; nanoESI-Q-TOF, nanoelectrospray ionization quadrupole time-of-flight; LC-MS/MS, liquid chromatography/tandem mass spectrometry; tBHP, tert-butylhydroperoxide; Mes, 4-morpholineethanesulfonic acid; DTT, dithiothreitol; NOS, nitric-oxide synthase. ![]()
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